Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A32 F60 I1 R1 18 102.6 3507422 99.1% 3475855 138.8

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,530,188 Δ1 bp coding (415/879 nt) hslO → molecular chaperone Hsp33

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,530,1880T.95.0% 223.8 / 7.4 60coding (415/879 nt)hslOmolecular chaperone Hsp33
Reads supporting (aligned to +/- strand):  ref base T (1/2);  new base . (28/29);  total (29/31)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.18e-01

GTGCAGGGCGAAATTCCAGAAAATGCCGACCTGAAAACGCTGGTCGGCAATGGTTACGTGGTGATCACCATTACCCCGAGCGAAGGCGAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCCTGCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGCAGGCGGTATGTTGTTGCAGGTAATGCCTGCGCAAAATGCCCAGCAGGAC  >  NC_000913/3530053‑3530322
                                                                                                                                       |                                                                                                                                      
gTGCAGGGCGAAATTCCAGAAAATGCCGACCTGAAAACGCTGGTCGGCAATGGTTACGTGGTGATCACCATTACCCCGAGCGAAGGCGAACGCTATCAGGGCGTAATTGGTCTGGAAGGTGATACCCTGGCGgcc‑gcctg                                                                                                                                   >  2:321470/1‑140 (MQ=255)
     gggCGAAATTCCAGAAACTGCCTACCTGAAAGCGCGGGTCGGCAATGGGTACGTGGTGATCACCATTACCCCGAGCGAAGGCGAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGa                                                                                                                              <  2:739327/140‑1 (MQ=255)
     gggCGAAATTCCAGAAAATGCCGACCTGAAAACGCTGGTCGGCAATGGTTACGTGGTGATCACCATTACCCCGAGCGAAGGCGAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGa                                                                                                                              <  2:82320/140‑1 (MQ=255)
     gggCGAAATTCCAGAAAATGCCGACCTGAAAACGCTGGTCGGCAATGGTTACGTGGTGATCACCATTACCCCGAGCGAAGGCGAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGa                                                                                                                              <  2:259755/140‑1 (MQ=255)
         gAAATTCCAGAAAATGCCGACCTGAAAACGCTGGTCGGCAATGGTTACGTGGTGATCACCATTACCCCGAGCGAAGGCGAACGCTATCAGGGCGTAATTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTAc                                                                                                                          <  1:321470/140‑1 (MQ=255)
              tCCAGAAAATGCCGAGCTGAAAGCGATGGCCGGCAATGGTTACGTGGTGATCACCATTACCCCGAGCGAAGGCGAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTAt                                                                                                                     <  1:820132/140‑1 (MQ=255)
              tCCAGAAAATGCCGACCTGAAAACGCTGGTCGGCAATGGTTACGTGGTGATCACCATTACCCCGAGCGAAGGCGAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTAt                                                                                                                     <  2:1670025/140‑1 (MQ=255)
                     aaTGCCGACCTGAAAACGCTGGTCGGCAATGGTTACGTGGTGATCACCATTACCCCGAGCGAAGGCGAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCt                                                                                                              >  1:131096/1‑140 (MQ=255)
                           gACCTGAAAACGCTGGTCGGCAATGGTTACGTGGTGATCACCATTACCCCGAGCGAAGGCGAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAg                                                                                                        <  1:1436995/140‑1 (MQ=255)
                                      gCTGGTCGGCAATGGTTACGTGGTGATCACCATTACCCCGAGCGAAGGCGAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGAcgcg                                                                                             >  1:269417/1‑140 (MQ=255)
                                        tGGTCGGCAATGGTTACGTGGTGATCACCATTACCCCGAGCGAAGGCGAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGGTTAGTTTATGCGATCTGGACAGCTGCCGACGCGcc                                                                                           >  2:590099/1‑140 (MQ=255)
                                        tGGTCGGCAATGGTTACGTGGTGATCACCATTACCCCGAGCGAAGGCGAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGcc                                                                                           >  2:331280/1‑140 (MQ=255)
                                           tCGGCAATGGTTACGTGGTGATCACCATTACCCCGAGCGAAGGCGAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGt                                                                                        >  2:217516/1‑140 (MQ=255)
                                                    gTTACGTGGTGATCACCATTACCCCGAGCGAAGGCGAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCa                                                                               >  2:1706875/1‑140 (MQ=255)
                                                    gTTACGTGGTGATCACCATTACCCCGAGCGAAGGCGAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCa                                                                               >  2:1363735/1‑140 (MQ=255)
                                                         gtggtgATCACCATTACCCCGAGCGAAGGCGAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCAc                                                                              <  1:1505532/136‑1 (MQ=255)
                                                         gtggtgATCACCATTACCCCGAGCGAAGGCGAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCAc                                                                              >  2:1505532/1‑136 (MQ=255)
                                                            gtgATCACCATTACCCCGAGCGAAGGCGAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGAc                                                                       >  1:1201059/1‑140 (MQ=255)
                                                            gtgATCACCATTACCCCGAGCGAAGGCGAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGAc                                                                       <  1:1706875/140‑1 (MQ=255)
                                                              gATCACCATTACCCCGAGCGAAGGCGAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGt                                                                     >  1:1150520/1‑140 (MQ=255)
                                                               aTCACCATTACCCCGAGCGAAGGCGAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAGCAGCTGCAGACGCGCCGGTTTATTCGCACCGGCGACGTa                                                                    >  2:642017/1‑140 (MQ=255)
                                                               aTCACCATTACCCCGAGCGAAGGCGAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTa                                                                    >  2:230302/1‑140 (MQ=255)
                                                               aTCACCATTACCCCGAGCGAAGGCGAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTa                                                                    >  2:127166/1‑140 (MQ=255)
                                                                      ttACCCCGAGCGAAGGCGAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCa                                                             >  2:1478032/1‑140 (MQ=255)
                                                                              aGCGAAGGCGAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTTCCGACGCGGCTGGTTACTCGCACCGACGACCTAGACGGCAAACCGGCt                                                     >  2:625528/1‑140 (MQ=255)
                                                                              aGCGAAGGCGAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCt                                                     >  2:951803/1‑140 (MQ=255)
                                                                                cGAAGGCGAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGc                                                   <  1:126792/140‑1 (MQ=255)
                                                                                cGAAGGCGAACGCTACCAGGGCCTATTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGc                                                   <  1:669729/140‑1 (MQ=255)
                                                                                cGAAGGCGAACGCTAACAGGGCATACTTGATCTGGAAAGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGc                                                   <  1:642017/140‑1 (MQ=255)
                                                                                  aaGGCGAACGCTATCGGGGCGTAGTTGGTATGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGCAg                                                 <  1:625528/140‑1 (MQ=255)
                                                                                   aGGCGAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGCAgg                                                <  1:1170887/140‑1 (MQ=255)
                                                                                   aGGCGAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGCAgg                                                <  1:284841/140‑1 (MQ=255)
                                                                                   aGGCGAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTGTATTCGCGCCGGCGACTTAGACAGCAAACCGGCTGCAgg                                                >  2:836801/1‑140 (MQ=255)
                                                                                     gCGAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGCAGGCg                                              <  1:1363735/140‑1 (MQ=255)
                                                                                       gAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGCAGGCGGt                                            <  1:127166/140‑1 (MQ=255)
                                                                                       gAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGCAGGCGGt                                            <  2:1201059/140‑1 (MQ=255)
                                                                                         aCGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGCAGGCGGTAt                                          <  1:331280/140‑1 (MQ=255)
                                                                                          cGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGCAGGCGGTAtg                                         <  2:131096/140‑1 (MQ=255)
                                                                                               tCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGCAGGCGGTAtgttg                                      >  2:1257075/1‑138 (MQ=255)
                                                                                               tCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGCAGGCGGTAtgttg                                      <  1:1257075/138‑1 (MQ=255)
                                                                                                cAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGCAGGCGGTATGttgttg                                   <  1:1478032/140‑1 (MQ=255)
                                                                                                    gCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCCCCGGCGACGTAGACGGGAAACCGGCTGCAGACGGTATGTTGTTGCAgg                               >  2:499732/1‑140 (MQ=255)
                                                                                                       tAGTTGGTCTGGAAGGTGATACCCTGGCGGCCTGCCTGGTAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGCAGGCGGTATGttgttg                                   >  2:1010982/1‑134 (MQ=255)
                                                                                                       tAGTTGGTCTGGAAGGTGATACCCTGGCGGCCTGCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGCAGGCGGTATGttgttg                                   <  1:1010982/134‑1 (MQ=255)
                                                                                                       tAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGCAGGCg                                              >  2:1608178/1‑122 (MQ=255)
                                                                                                       tAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGCAGGCg                                              >  2:330908/1‑122 (MQ=255)
                                                                                                       tAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGCAGGCg                                              <  1:330908/122‑1 (MQ=255)
                                                                                                       tAGTTGGTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGCAGGCg                                              <  1:1608178/122‑1 (MQ=255)
                                                                                                             gTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGCAGGCGGTATGTTGTTGCAGGTAATGCCTg                      >  2:1415031/1‑140 (MQ=255)
                                                                                                             gTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGCAGGCGGTATGTTGTTGCAGGTAATGCCTg                      >  2:1307089/1‑140 (MQ=255)
                                                                                                             gTCTGGAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGCAGGCGGTATGTTGTTGCAGGTAATGCCTg                      >  2:1097106/1‑140 (MQ=255)
                                                                                                              tCTGGAAGGTGATACTCTGGCGACCT‑CCTCGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGCAGGCGGTATGTTGTTGCAGGTAATGCCTgc                     <  1:499732/140‑1 (MQ=255)
                                                                                                                  gAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGATGGCAAACCAGCTGCAGGCGGTATGTAGTTGGAGGTAATGCCTGCGCaa                 >  2:616130/1‑140 (MQ=255)
                                                                                                                  gAAGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGCAGGCGGTATGTTGTTGCAGGTAATGCCTGCGCaa                 >  2:1402367/1‑140 (MQ=255)
                                                                                                                   aaGGTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGCAGGCGGTATGTTGTTGCAGGTAATGCCTGCGCaaa                <  1:230302/140‑1 (MQ=255)
                                                                                                                      gTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGCAGGCGGTATGTTGTTGCAGGTAATGCCTGCGCAAAATg             <  1:217516/140‑1 (MQ=255)
                                                                                                                      gTGATACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGCAGGCGGTATGTTGTTGCAGGTAATGCCTGCGCAAAATg             <  1:1402367/140‑1 (MQ=255)
                                                                                                                         aTACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGCAGGCGGTATGTTGTTGCAGGTAATGCCTGCGCAAAATGccc          <  1:1061440/140‑1 (MQ=255)
                                                                                                                          tACCCTGGCGGCC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGCAGGCGGTATGTTGTTGCAGGTAATGCCTGCGCAAAATGCCca         >  2:1698203/1‑140 (MQ=255)
                                                                                                                                ggcggcC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGCAGGCGGTATGTTGTTGCAGGTAATGCCTGCGCAAAATGCCCAGCAGga   <  2:269417/140‑1 (MQ=255)
                                                                                                                                 gcggcC‑GCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGCAGGCGGTATGTTGTTGCAGGTAATGCCTGCGCAAAATGCCCAGCAGgac  >  2:988382/1‑140 (MQ=255)
                                                                                                                                       |                                                                                                                                      
GTGCAGGGCGAAATTCCAGAAAATGCCGACCTGAAAACGCTGGTCGGCAATGGTTACGTGGTGATCACCATTACCCCGAGCGAAGGCGAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCCTGCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGCAGGCGGTATGTTGTTGCAGGTAATGCCTGCGCAAAATGCCCAGCAGGAC  >  NC_000913/3530053‑3530322

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A