Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A15 F48 I1 R1
|
115 |
87.5 |
3003888 |
99.1% |
2976853 |
139.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
318,995 |
G→A |
P336L (CCG→CTG) |
rclA ← |
putative pyridine nucleotide‑disulfide oxidoreductase RclA |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 318,995 | 0 | G | A | 100.0%
| 456.7
/ NA
| 126 | P336L (CCG→CTG) | rclA | putative pyridine nucleotide‑disulfide oxidoreductase RclA |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (65/61); total (65/61) |
Only 100 of 126 total aligned reads displayed.
AATCGCTTTTAATACCCCACGAGTATCATTCATCACTCTGGCACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAGTGATATGTAAGTAAATTGCAGCCCGCCGGTAACATCTCC > NC_000913/318859‑319131
|
aaTCGCTTTTAATACCCCACGAGTATCATTCATCACTCTGGCACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAgtg > 1:693503/1‑140 (MQ=255)
aTCGCTTTTAATACCCCACGAGTATCATTCATCACTCTGGCACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAgtgt < 1:744474/140‑1 (MQ=255)
tCGCTTTTAATACCCCACGAGTATCATTCATCACTCTGGCACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTc > 2:1038791/1‑140 (MQ=255)
tCGCTTTTAATACCCCACGAGTATCATTCATCACTCTGGCACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTc > 2:1365576/1‑140 (MQ=255)
gCTTTTAATACCCCACGAGTATCATTCATCACTCTGGCACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCAt < 2:1036572/140‑1 (MQ=255)
cTTTTAATACCCCACGAGTATCATTCATCACTCTGGCACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATa > 2:563437/1‑140 (MQ=255)
ttAATACCCCACGAGTATCATTCATCACTCTGGCACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAAt < 2:1104813/140‑1 (MQ=255)
cccACGAGTATCATTCATCACTCTGGCACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATa < 1:1051503/134‑1 (MQ=255)
cccACGAGTATCATTCATCACTCTGGCACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATa > 2:1051503/1‑134 (MQ=255)
ccACGAGTATCATTCATCACTCTGGCACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATa > 2:1173827/1‑140 (MQ=255)
ccACGAGTATCATTCATCACTCTGGCACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATa > 2:463291/1‑140 (MQ=255)
ccACGAGTATCATTCATCACTCTGGCACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATa > 2:1191506/1‑140 (MQ=255)
ccACGAGTATCATTCATCACTCTGGCACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATa > 1:1446195/1‑140 (MQ=255)
ccACGAGTATCATTCATCACTCTGGCACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATa > 1:1482663/1‑140 (MQ=255)
gAGTATCATTCATCACTCTGGCACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGc < 1:238846/140‑1 (MQ=255)
gAGTATCATTCATCACTCTGGCACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACA‑GGGCAGTGTCATAAATACGGAATAAGGca < 1:748299/140‑1 (MQ=255)
atcaCTCTGGCACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCg < 2:1295728/140‑1 (MQ=255)
atcaCTCTGGCACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCg < 2:1436283/140‑1 (MQ=255)
atcaCTCTGGCACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCg > 2:1436726/1‑140 (MQ=255)
tcaCTCTGGCACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCgt > 2:427894/1‑139 (MQ=255)
tcaCTCTGGCACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGa > 2:950264/1‑140 (MQ=255)
tcaCTCTGGCACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGa > 1:643725/1‑140 (MQ=255)
caCTCTGGCACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGat < 2:693503/140‑1 (MQ=255)
atctGGCACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGatca < 2:127680/139‑1 (MQ=255)
tctGGCACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCACCCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGatcat < 1:291824/140‑1 (MQ=255)
tctGGCACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGatcat < 1:75839/140‑1 (MQ=255)
tctGGCACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGatcat < 2:447268/140‑1 (MQ=255)
tctGGCACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGatcat < 1:1191803/140‑1 (MQ=255)
tctGGCACGCGGAATTGCACCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGatcat > 1:21730/1‑140 (MQ=255)
gCACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGt < 2:1482663/140‑1 (MQ=255)
gCACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGt > 1:473822/1‑140 (MQ=255)
gCACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGt > 1:701582/1‑140 (MQ=255)
cACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGta < 1:1191506/140‑1 (MQ=255)
aaTTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGtt < 2:1324033/140‑1 (MQ=255)
aaTTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGtt < 2:1446195/140‑1 (MQ=255)
aaTTGCACCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGtt < 2:21730/140‑1 (MQ=255)
ttGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTg > 1:509081/1‑140 (MQ=255)
tGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGc < 2:1263517/140‑1 (MQ=255)
aCAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCAcc > 2:158183/1‑140 (MQ=255)
aCAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCAcc < 2:1258153/140‑1 (MQ=255)
aCAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCAcc > 1:262878/1‑140 (MQ=255)
aCAGGCAATGTCACAACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGc > 2:897205/1‑133 (MQ=255)
aCAGGCAATGTCACAACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGc < 1:897205/133‑1 (MQ=255)
ggCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAg < 2:1272850/140‑1 (MQ=255)
aTGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAAc < 1:1436726/140‑1 (MQ=255)
aTGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAAc < 1:1204492/140‑1 (MQ=255)
aTGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAAc < 1:532084/140‑1 (MQ=255)
tGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACt > 1:96869/1‑140 (MQ=255)
gTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACtc < 2:701582/140‑1 (MQ=255)
tCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACtca < 1:860052/140‑1 (MQ=255)
accaccTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACtcatc > 2:1091493/1‑140 (MQ=255)
cTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTa < 2:964981/140‑1 (MQ=255)
cTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTa < 1:950264/140‑1 (MQ=255)
cTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTa < 1:1447313/140‑1 (MQ=255)
tGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTAc > 2:1454040/1‑140 (MQ=255)
tatCAGCACCACTCTCTCTGGCTTGTTTTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATg < 1:1283615/140‑1 (MQ=255)
tatCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATg < 2:643725/140‑1 (MQ=255)
tatCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATg > 1:58881/1‑140 (MQ=255)
atCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGc < 2:846585/140‑1 (MQ=255)
cAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCgg < 1:931844/140‑1 (MQ=255)
gCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTa > 1:583564/1‑140 (MQ=255)
caccacTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTaa < 2:96869/140‑1 (MQ=255)
ccacTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAatc > 2:696535/1‑140 (MQ=255)
acTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAatcat < 1:140228/140‑1 (MQ=255)
acTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAatcat < 1:1454040/140‑1 (MQ=255)
acTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAatcat < 1:463291/140‑1 (MQ=255)
ctctctctGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAatcatc < 1:1038791/140‑1 (MQ=255)
ctctctctGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAatcatc < 1:1091493/140‑1 (MQ=255)
ctctctctGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAatcatc < 2:262878/140‑1 (MQ=255)
ctctctctGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAatcatc < 1:806631/140‑1 (MQ=255)
tctGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAgcg > 1:873831/1‑138 (MQ=255)
tctGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAGtt > 2:556883/1‑139 (MQ=255)
ggCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAGTGata > 1:71093/1‑140 (MQ=255)
cTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAGTGATATg > 1:691339/1‑140 (MQ=255)
gTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAGTGATATgtaa > 1:128708/1‑140 (MQ=255)
gTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAGTGATATgtaa > 1:1383311/1‑140 (MQ=255)
gTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAGTGATATgtaa > 2:563309/1‑140 (MQ=255)
gTTCTTCTGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAGTGATATgtaa > 1:577667/1‑140 (MQ=255)
ctGTCATACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAGTGATATGTAAGTAAAt > 1:1082097/1‑140 (MQ=255)
aTACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAGTGATATGTAAGTAAATTGCAg > 2:227479/1‑140 (MQ=255)
tACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAGTGATATGTAAGTAAATTGCAGc < 1:158183/140‑1 (MQ=255)
tACCAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAGTGATATGTAAGTAAATTGCAGc > 2:1115611/1‑140 (MQ=255)
ccAACCCTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAGTGATATGTAAGTAAATTGCAGccc > 2:508606/1‑140 (MQ=255)
ccTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAGTGATATGTAAGTAAATTGCAGCccgccgt > 2:1199804/1‑139 (MQ=255)
ccTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAGTGATATGTAAGTAAATTGCAGCCCGCCgg > 1:826686/1‑140 (MQ=255)
ccTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAGTGATATGTAAGTAAATTGCAGCCCGCCgg > 1:560514/1‑140 (MQ=255)
ccTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAGTGATATGTAAGTAAATTGCAGCCCGCCgg < 2:1383311/140‑1 (MQ=255)
cTGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAGTGATATGTAAGTAAATTGCAGCCCGCCGGt < 1:556883/140‑1 (MQ=255)
tGGACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTACCTCATCACGTACAATGCGGTAATCATCCAGTGATATGTAAGTAAATTGCAGCCCGCCGGTa < 2:735091/140‑1 (MQ=255)
ggACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAGTGATATGTAAGTAAATTGCAGCCCGCCGGTaa > 1:77218/1‑140 (MQ=255)
gACAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAGTGATATGTAAGTAAATTGCAGCCCGCCGGTAAc > 2:228001/1‑140 (MQ=255)
cAGGGGCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCACCCAGTGATATGTAAGTAAATTGCAGCCCGCCGGTAACAt < 2:1420699/140‑1 (MQ=255)
gggCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAGTGATATGTAAGTAAATTGCAGTCCGCCGGTAACAtctc > 2:1192208/1‑140 (MQ=255)
gggCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAGTGATATGTAAGTAAATTGCAGCCCGCCGGTAATAtctc > 2:918474/1‑140 (MQ=255)
gggCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAGTGATATGTAAGTAAATTGCAGCCCGCCGGTAACAtctc > 1:1494697/1‑140 (MQ=255)
gggCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAGTGATATGTAAGTAAATTGCAGCCCGCCGGTAACAtctc > 1:330856/1‑140 (MQ=255)
gggCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAGTGATATGTAAGTAAATTGCAGCCCGCCGGTAACAtctc > 1:922719/1‑140 (MQ=255)
gggCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAGTGATATGTAAGTAAATTGCAGCCCGCCGGTAACAtctc > 1:1248459/1‑140 (MQ=255)
gggCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAGTGATATGTAAGTAAATTGCAGCCCGCCGGTAACAtctc > 1:463638/1‑140 (MQ=255)
ggCAGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAGTGATATGTAAGTAAATTGCAGCCCGCCGGTAACATCTcc > 2:786255/1‑140 (MQ=255)
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AATCGCTTTTAATACCCCACGAGTATCATTCATCACTCTGGCACGCGGAATTGCAGCTACAGGCAATGTCACCACCTGAATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAGTGATATGTAAGTAAATTGCAGCCCGCCGGTAACATCTCC > NC_000913/318859‑319131
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
