Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A18 F48 I1 R1 70 76.3 2572620 98.7% 2539175 139.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 79,199 C→G S85S (TCG→TCC leuD ← 3‑isopropylmalate dehydratase subunit LeuD

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_00091379,1990CG100.0% 210.8 / NA 55S85S (TCG→TCCleuD3‑isopropylmalate dehydratase subunit LeuD
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (30/25);  total (30/25)

CTTCTGCATCGCTTAATTTCACCGGCAGCAGCTGGTTGTTAAAGCTATTGCCGTAGAAGATGTCAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGCGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTCAGCACGAAGTCCGGGTTTGGCTGTTGGCCTTTTTCATCCAGAAAACGCCAGTCGTTAAACAGATGC  >  NC_000913/79069‑79331
                                                                                                                                  |                                                                                                                                    
cTTCTGCATCGCTTAATTTCACCGGCAGCAGCTGGTTGTTAAAGCTATTGCCGTAGAAGATGTCAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCca                                                                                                                             <  2:882954/140‑1 (MQ=255)
cTTCTGCATCGCTTAATTTCACCGGCAGCAGCTGGTTGTTAAAGCTATTGCCGTAGAAGATGTCAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCca                                                                                                                             >  1:1274039/1‑140 (MQ=255)
  tCTGCATCGCTTAATTTCACCGGCAGCAGCTGGTTGTTAAAGCTATTGCCGTAGAAGATGTCAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCcaca                                                                                                                           >  1:442435/1‑140 (MQ=255)
    tGCATCGCTTAATTTCACCGGCAGCAGCTGGTTGTTAAAGCTATTGCCGTAGAAGATGTCAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGc                                                                                                                         <  1:1198032/140‑1 (MQ=255)
           cTTAATTTCACCGGCATCAGCTGGTTGTTAAAGCTATTGCCGTAGAAGATGTCAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGtt                                                                                                                  >  2:952984/1‑140 (MQ=255)
           cTTAATTTCACCGGCAGCAGCTGGTTGTTAAAGCTATTGCCGTAGAAGATGTCAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGtt                                                                                                                  >  1:816797/1‑140 (MQ=255)
              aaTTTCACCGGCAGCAGCTGGTTGTTAAAGCTATTGCCGTAGAAGATGTCAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTtc                                                                                                               <  2:442435/140‑1 (MQ=255)
                   cACCGGCAGCAGCTGGTTGTTAAAGCTATTGCCGTAGAAGATGTCAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTg                                                                                                          >  2:226274/1‑140 (MQ=255)
                    aCCGGCAGCAGCTGGTTGTTAAAGCTATTGCCGTAGAAGATGTCAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGc                                                                                                         <  2:688248/140‑1 (MQ=255)
                     ccGGCAGCAGCTGGTTGTTAAAGCTATTGCCGTAGAAGATGTCAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGcc                                                                                                        >  1:322267/1‑140 (MQ=255)
                        gcagcaGCTGGTTGTTAAAGCTATTGCCGTAGAAGATGTCAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGc                                                                                                     <  2:751994/140‑1 (MQ=255)
                                tGGTTGTTAAAGCTATTGCCGTAGAAGATGTCAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGa                                                                                             <  2:212414/140‑1 (MQ=255)
                                 ggTTGTTAAAGCTATTGCCGTAGAAGATGTCAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGaa                                                                                            <  1:578758/140‑1 (MQ=255)
                                  gttgttAAAGCTATTGCCGTAGAAGATGTCAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAg                                                                                           <  2:378579/140‑1 (MQ=255)
                                  gttgttAAAGCTATTGCCGTAGAAGATGTCAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAg                                                                                           <  1:76680/140‑1 (MQ=255)
                                  gttgttAAAGCTATTGCCGTAGAAGATGTCAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCACGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAg                                                                                           >  2:777922/1‑140 (MQ=255)
                                    tgttAAAGCTATTGCCGTAGAAGATGTCAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCTAGCAAAATGGAAgcg                                                                                         <  2:759159/140‑1 (MQ=255)
                                    tgttAAAGCTATTGCCGTAGAAGATGTCAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAgcg                                                                                         <  2:816797/140‑1 (MQ=255)
                                    tgttAAAGCTATTGCCGTAGAAGATGTCAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAgcg                                                                                         <  1:84026/140‑1 (MQ=255)
                                            cTATTGCCGTAGAAGATGTCAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGATGCGCCCTGATa                                                                                 <  2:1012267/140‑1 (MQ=255)
                                            cTATTGCCGTAGAAGATGTCAGCAAAACTCGGCGCAATCACCACTTTAAAACCGAAGTCGGTCAAGGCCCAGGGCGCGTGCTCACTGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATa                                                                                 <  1:863536/140‑1 (MQ=255)
                                             tATTGCCGTAGAAGATGTCAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATAc                                                                                >  1:657728/1‑140 (MQ=255)
                                             tATTGCCGTAGAAGATGTCAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATAc                                                                                >  2:55598/1‑140 (MQ=255)
                                                   cGTAGAAGATGTCAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCggg                                                                          <  2:578955/140‑1 (MQ=255)
                                                         agaTGTCAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTc                                                                    >  2:312290/1‑140 (MQ=255)
                                                          gaTGTCAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTCa                                                                   >  1:781061/1‑140 (MQ=255)
                                                            tGTCAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTCAGc                                                                 >  1:1136369/1‑140 (MQ=255)
                                                             gTCAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTCAGCa                                                                <  1:662388/140‑1 (MQ=255)
                                                             gTCAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTCAGCa                                                                >  1:730936/1‑140 (MQ=255)
                                                             gTCAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTCAGCa                                                                <  2:1274039/140‑1 (MQ=255)
                                                               cAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAATAGCCACAGCCGAGGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTCAGCACg                                                              <  1:439379/140‑1 (MQ=255)
                                                               cAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTCAGCACg                                                              <  1:55598/140‑1 (MQ=255)
                                                               cAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTCAGCACg                                                              <  2:1136369/140‑1 (MQ=255)
                                                               cAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGAGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTCAGCACg                                                              >  1:839472/1‑140 (MQ=255)
                                                                   aaaaCTCGGGGCAATCACCACTTCAAAACCGTAGTCAGTCAACGCCCAGGGCGCGTGCTGACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTCAGCACGAAGt                                                          <  2:1039867/140‑1 (MQ=255)
                                                                   aaaaCTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTCAGCACGAAGt                                                          <  1:3291/140‑1 (MQ=255)
                                                                          ggCGCAATCACCACTTTAAATCCGTAGTCGGTCAATGCCCAGGGCGAGTGCTCACTCAAACAGCAACTGACGAACTTTCCTCGCCCCAGCAAAATGCAACCGCCCTGCCACTGCGGGAAGTTCAGCACGAAGTCCGGGtt                                                   <  2:857373/140‑1 (MQ=255)
                                                                          ggCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTCAGCACGAAGTCCGGGtt                                                   >  1:390964/1‑140 (MQ=255)
                                                                            cgcAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTCAGCACGAAGTCCGGGTTTg                                                 <  1:814453/140‑1 (MQ=255)
                                                                                 tCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTCAGCACGAAGTCCGGGTTTGGCTGt                                            >  2:1201871/1‑140 (MQ=255)
                                                                                 tCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTCAGCACGAAGTCCGGGTTTGGCTGt                                            >  2:77208/1‑140 (MQ=255)
                                                                                     cacTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTCAGCACGAAGTCCGGGTTTGGCTGTTGGc                                        <  2:390964/140‑1 (MQ=255)
                                                                                          tAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTCAGCACGAAGTCCGGGTTTGGCTGTTGGCCtttt                                   >  2:748563/1‑140 (MQ=255)
                                                                                                 gTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTCAGCACGAAGTCCGGGTTTGGCTGTTGGCCTTTTTCATCCa                            >  1:816003/1‑140 (MQ=255)
                                                                                                  tAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTCAGCACGAAGTCCGGGTTTGGCTGTTGGCCTTTTTCATCCAg                           >  2:93023/1‑140 (MQ=255)
                                                                                                  tAGTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTCAGCACGAAGTCCGGGTTTGGCTGTTGGCCTTTTTCATCCAg                           >  1:707745/1‑140 (MQ=255)
                                                                                                    gTCGGTCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTCAGCACGAAGTCCGGGTTTGGCTGTTGGCCTTTTTCATCCAGaa                         >  1:1234953/1‑140 (MQ=255)
                                                                                                         tCAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTCAGCACGAAGTCCGGGTTTGGCTGTTGGCCTTTTTCATCCAGAAAACGc                    >  2:1143793/1‑140 (MQ=255)
                                                                                                          cAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTCAGCACGAAGTCCGGGTTTGGCTGTTGGCCTTTTTCATCCAGAAAACGcc                   <  1:93023/140‑1 (MQ=255)
                                                                                                          cAATGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTCAGCACGAAGTCCGGGTTTGGCTGTTGGCCTTTTTCATCCAGAAAACGcc                   <  1:179523/140‑1 (MQ=255)
                                                                                                             tGCCCAGGGCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTTATACTTCGGGAAGTTCAGCACGAAGTCCGGGTTTGGCTGTTGGCCTTTTTCATCCAGAAAACGCCAGt                >  2:491972/1‑140 (MQ=255)
                                                                                                                   gggCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTCAGCACGAAGTCCGGGTTTGGCTGTTGGCCTTTTTCATCCAGAAAACGCCAGTCGTTaa          >  2:326219/1‑140 (MQ=255)
                                                                                                                   gggCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTCAGCACGAAGTCCGGGTTTGGCTGTTGGCCTTTTTCATCCAGAAAACGCCAGTCGTTaa          >  1:474253/1‑140 (MQ=255)
                                                                                                                   gggCGCGTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTCAGCACGAAGTCCGGGTTTGGCTGTTGGCCTTTTTCATCCAGAAAACGCCAGTCGTTaa          >  2:600998/1‑140 (MQ=255)
                                                                                                                       gcgTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTCAGCACGAAGTCCGGGTTTGGCTGTTGGCCTTTTTCATCCAGAAAACGCCAGTCGTTAAACaa      >  1:629643/1‑139 (MQ=255)
                                                                                                                       gcgTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTCAGCACGAAGTCCGGGTTTGGCTGTTGGCCTTTTTCATCCAGAAAACGCCAGTCGTTAAACAg      >  2:570811/1‑140 (MQ=255)
                                                                                                                         gTGCTCACGGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTCAGCACGAAGTCCGGGTTTGGCTGTTGGCCTTTTTCATCCAGAAAACGCCAGTCGTTAAACAGAt    >  2:393575/1‑140 (MQ=255)
                                                                                                                           gCTCACAGGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTCAGCACGAAGTCCGTGTTTGGCTGTTGGCCTTTTTCATCCAGAAAACGCCAGTCGTTAAACAGATgc  <  2:839472/140‑1 (MQ=255)
                                                                                                                                  |                                                                                                                                    
CTTCTGCATCGCTTAATTTCACCGGCAGCAGCTGGTTGTTAAAGCTATTGCCGTAGAAGATGTCAGCAAAACTCGGCGCAATCACCACTTTAAAACCGTAGTCGGTCAATGCCCAGGGCGCGTGCTCACGCGAAGAGCCACAGCCGAAGTTTTCTCGTGCCAGCAAAATGGAAGCGCCCTGATACTGCGGGAAGTTCAGCACGAAGTCCGGGTTTGGCTGTTGGCCTTTTTCATCCAGAAAACGCCAGTCGTTAAACAGATGC  >  NC_000913/79069‑79331

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

N/A