Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A27 F53 I1 R1 117 75.6 2693952 95.6% 2575418 126.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP006881 3,723,652 C→T L156L (CTG→TTG)  U712_19195 → putative transporter ywcJ

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0068813,723,6520CT100.0% 209.0 / NA 61L156L (CTG→TTG) U712_19195putative transporter ywcJ
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (33/28);  total (33/28)

TGCCGGCAATTTGATCGGCGCCATTCTATTTGCCATTCTGATCAGCGCGACAGGGCTTTTTGAGGAGGCTTCTGTTCATTCCTTTTTGATTCATCTGGCAGAGCACAAAATGGAGCCGCCCGCTTCCGAACTGTTTTTCAGAGGGATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTTAAAGGGGAAGG‑GGCAAAGCTCTTTACCATGATGCTTTTCGTTTTCTGCTTCTTCATTTCCGGCT  >  CP006881/3723522‑3723781
                                                                                                                                  |                                                                                                                                  
tGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGttttt                                                                                                                             <  7:300778/138‑1 (MQ=255)
tGCCGGCAATTTAATCGGCGCCATTCTGTTGGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGttttt                                                                                                                             <  4:69527/138‑1 (MQ=255)
    ggCAATTTAATCGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCagag                                                                                                                        <  2:25025/139‑1 (MQ=255)
      cAATTTACTCGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAgga                                                                                                                      <  3:316112/139‑2 (MQ=255)
      cAATTTAATCGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAgga                                                                                                                      <  5:145654/139‑2 (MQ=255)
      cAATTTAAGCGGCGCCATTCTGTTGGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCGGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAgga                                                                                                                      <  4:245965/139‑2 (MQ=255)
          ttaaTCGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGc                                                                                                                  >  3:106369/4‑139 (MQ=255)
             aTCGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCtg                                                                                                                <  1:13377/138‑1 (MQ=255)
             aTCGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCtg                                                                                                                <  8:29268/138‑1 (MQ=255)
                   gcCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGCGCCTTCTGTTGATTCCGTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGTAATGCTGTGCAAtt                                                                                                         >  5:22745/1‑139 (MQ=255)
                            tttGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTtgtgt                                                                                                >  2:207561/1‑139 (MQ=255)
                                ccATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGcc                                                                                             <  1:207561/138‑1 (MQ=255)
                                ccATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGcc                                                                                             <  5:188809/138‑1 (MQ=255)
                                ccATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGcc                                                                                             <  5:113650/138‑1 (MQ=255)
                                    ccTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCtgtg                                                                                                              <  6:258032/116‑1 (MQ=255)
                                    ccTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCtgtg                                                                                                              >  5:258032/2‑117 (MQ=255)
                                    ccTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGcc                                                                                        >  7:61673/2‑139 (MQ=255)
                                    ccTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGcc                                                                                        >  1:226009/2‑139 (MQ=255)
                                      tGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCtt                                                                                      >  4:266911/1‑139 (MQ=255)
                                        aTCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAAtt                                                                                                         <  2:63572/118‑1 (MQ=255)
                                        aTCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAAtt                                                                                                         >  1:63572/1‑118 (MQ=255)
                                        aTCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCtttt                                                                                    >  4:227303/1‑139 (MQ=255)
                                             cgcgACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGATGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCAt                                                                                >  3:298047/1‑138 (MQ=255)
                                             cgcgACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCAtt                                                                               >  7:215311/1‑139 (MQ=255)
                                             cgcgACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCAtt                                                                               >  2:29002/1‑139 (MQ=255)
                                             cgcgACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTAAtt                                                                               >  2:10790/1‑139 (MQ=255)
                                                   gggacTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATg                                                                         <  3:227303/135‑1 (MQ=255)
                                                    ggtcTTTTTGAGGAGCCTTCTGTGCATTCCTTTTTGATTCATTTGGCACAGCACAAAAGGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGt                                                                        <  4:213773/136‑1 (MQ=255)
                                                                 agccTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATg                                                                                                                   >  7:233494/4‑83 (MQ=255)
                                                                 agccTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATg                                                                                                                   <  8:233494/80‑1 (MQ=255)
                                                                 agccTTCTGTTCATTCCTTTTTGATTCATTTGGAAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAaagggga                                                           <  4:90160/136‑1 (MQ=255)
                                                                   ccTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCagag                                                                                                                        <  7:14564/75‑1 (MQ=255)
                                                                   ccTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCagag                                                                                                                        >  8:14564/2‑76 (MQ=255)
                                                                         gtacATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGGGGAAGG‑AGCa                                                   <  3:175602/135‑1 (MQ=255)
                                                                          ttaaTTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGGGGAAGG‑AGCa                                                   <  7:225489/134‑1 (MQ=255)
                                                                          ttCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGGGGAAGG‑AGCa                                                   <  3:259871/137‑1 (MQ=255)
                                                                          ttCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGGGGAAGG‑AGCa                                                   <  1:109805/137‑1 (MQ=255)
                                                                          ttCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCGTGCGAATTGTTTTTGAGAGGAATGGGGTTCAATTGGCTTGTGTGGCGCGCCGTTTTGAGTACCATGTGTGGCAAAGGGGGAGGAGGCaa                                                  >  2:93338/1‑139 (MQ=255)
                                                                          ttCATTCCTTTTTCATTCATTTGGAAGAGCACCAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGGGGAAGG‑AGCaaa                                                 <  3:218141/139‑1 (MQ=255)
                                                                            cATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGGGGAAGG‑AGCAAAg                                                <  5:241477/138‑1 (MQ=255)
                                                                             aTTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATTCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGGGGAAGG‑AGCAAAGct                                              >  6:22631/1‑139 (MQ=255)
                                                                             aTTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCACAATTGTTTTTCAGAGTAATGCTGTGCAATTGGCTAGTGTGACTCGCCTTTTTCATTACAATGTCTCTCAAATAGCAAGG‑AGCAAATct                                              >  8:225489/1‑139 (MQ=255)
                                                                             aTTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTACGAATTGTTTTTCAGAGGAAAGCTGTGCAATTTGCTTGTGTGCCTAGCCTTTTTAATTACAATGTCTCTAAAACGGGAAGG‑GGCAAAGct                                              >  3:8825/1‑139 (MQ=255)
                                                                               tCCTTTTTGATTCATTTGGCAGAGCACGAAATGGATCCGCCGGCTTCCGAATTGTTTTTCAGATGAATGCTGTGCAATTGGCTTGTGTGCCTCGGCTTTTTCAATCCAATGTCTCTAAAAGGGGAAGG‑AGCAAAGcttt                                            >  4:218141/1‑137 (MQ=255)
                                                                               tCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGGGGAAGG‑AGCAAAGcttt                                            >  8:52939/1‑137 (MQ=255)
                                                                               tCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGGGGAAGG‑AGCAAAGcttt                                            >  1:301902/1‑137 (MQ=255)
                                                                                       gATTCATATGGCAGACCACAAAATGGAGCCGCCGGCTTCCGAATTGTTATTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTATCATTCCAATGTCTCTCAAAGGGGAAGG‑AGCAAACCTTTTTACCat                                     <  6:108229/138‑1 (MQ=255)
                                                                                                  cAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGGGGAAGG‑AGCAAAGCTTTTTACCATGATGCTTTTCGt                         >  2:277274/1‑139 (MQ=255)
                                                                                                  cAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGAAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGGGGAAGG‑AGCAAAGCTTTTTACCATGATGCTTTTCGt                         >  8:115470/1‑139 (MQ=255)
                                                                                                     agCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGGGGAAGG‑AGCAAAGGTTTTTACCATGCTGCTTTTCGtttt                      >  2:211762/1‑139 (MQ=255)
                                                                                                     agCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGGGGAAGG‑AGCAAAGCTTTTTACCTTGATGCTTTTCGtttt                      >  3:274049/1‑139 (MQ=255)
                                                                                                     agCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGGGGAAGG‑AGCAAAGCTTTTTACCATGATGCTTTTCGttt                       >  6:167960/1‑138 (MQ=255)
                                                                                                        acaAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGGGGAAGG‑AGCAAAGCTTTTTACCATGATGCTTTTCGTTTTCTg                   <  4:298047/139‑1 (MQ=255)
                                                                                                                 aGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGGGGAAGG‑AGCAAAGCTTTTTACCATGATGCTTTTCGTTTTCTGCTTCTTTAt          >  5:1963/1‑139 (MQ=255)
                                                                                                                 aGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGGGGAAGG‑AGCAAAGCTTTTTACCATGATGCTTTTCGTTTTCTGCTTCTTTAt          >  8:107545/1‑139 (MQ=255)
                                                                                                                 aGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGGGGAAGG‑AGCAAAGCTTTTTACCATGATGCTTTTCGTTTTCTGCTTCTTTAt          >  8:110485/1‑139 (MQ=255)
                                                                                                                 aGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGGGGAAGG‑AGCAAAGCTTTTTACCATGATGCTTTTCGTTTTCTGCTTCTTTAt          >  3:65863/1‑139 (MQ=255)
                                                                                                                      ccggcTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGGGGAAGG‑AGCAAAGCTTTTTACCATGATGCTTTTCGTTTTCTGc                  >  7:144987/4‑126 (MQ=255)
                                                                                                                      ccggcTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGGGGAAGG‑AGCAAAGCTTTTTACCATGATGCTTTTCGTTTTCTGc                  <  8:144987/123‑1 (MQ=255)
                                                                                                                      ccggcTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAAAGTCTCTCAAAGGGGAAGG‑AGCAAAGCTTTTTACCATGATGCTTTTCGATTTCTGCTTATTTATTTcag     >  5:185028/4‑137 (MQ=255)
                                                                                                                         gcTTCAGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGGGGAAGG‑AGCAAAGCTTTTTACCATGATGCTTTTCGTTTTCTGCTTCTTTATTTCCGGCt  <  4:8825/139‑1 (MQ=255)
                                                                                                                                  |                                                                                                                                  
TGCCGGCAATTTGATCGGCGCCATTCTATTTGCCATTCTGATCAGCGCGACAGGGCTTTTTGAGGAGGCTTCTGTTCATTCCTTTTTGATTCATCTGGCAGAGCACAAAATGGAGCCGCCCGCTTCCGAACTGTTTTTCAGAGGGATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTTAAAGGGGAAGG‑GGCAAAGCTCTTTACCATGATGCTTTTCGTTTTCTGCTTCTTCATTTCCGGCT  >  CP006881/3723522‑3723781

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A