Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,808,078 |
A→G |
intergenic (+6/‑157) |
yniC → / → b1728 |
putative phosphatase/hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,808,078 | 0 | A | G | 100.0%
| 596.1
/ NA
| 182 | intergenic (+6/‑157) | yniC/b1728 | putative phosphatase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (98/84); total (98/84) |
Only 100 of 195 total aligned reads displayed.
AGCGCAAAATGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACAC > NC_000913/1807988‑1808166
|
aGCGCAAAATGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCggg > 2:3091604/1‑93 (MQ=255)
cgcAAAATGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGgggg < 1:1079018/93‑1 (MQ=255)
cgcAAAATGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGgggg < 2:2994962/93‑1 (MQ=255)
gcAAAATGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGc > 1:999564/1‑93 (MQ=255)
cAAAATGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCa > 2:2932736/1‑93 (MQ=255)
aaaaTGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAg < 1:1992576/93‑1 (MQ=255)
aaaaTGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGCGGGCAg > 1:1016555/1‑93 (MQ=255)
aaaTGCTCCACGTTTTGTATTAGCAGACGTCAAACTATCATCACTGCCAGAACTCACCGCAAAAGACCTTCTCGGATAGTGACCGGGGGGAGt > 2:2434887/1‑93 (MQ=255)
aaaTGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGt > 2:1018892/1‑93 (MQ=255)
aaaTGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGt < 2:4419367/93‑1 (MQ=255)
aaTGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTg > 1:2610025/1‑93 (MQ=255)
aTGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGa > 2:4498869/1‑93 (MQ=255)
aTCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGAtct > 2:591986/1‑93 (MQ=255)
tCCACGTTTTGTATTAGCAGACTTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGAtctc < 1:1019403/93‑1 (MQ=255)
tCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGAtctc > 2:2849399/1‑93 (MQ=255)
tCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGAtctc < 2:47640/93‑1 (MQ=255)
tCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGAtctc > 1:1400772/1‑93 (MQ=255)
cACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGc < 2:4537536/93‑1 (MQ=255)
cACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGc > 2:1685467/1‑93 (MQ=255)
cACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGc < 1:4645203/93‑1 (MQ=255)
aCGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCt > 1:2165523/1‑93 (MQ=255)
aCGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCt < 2:3082857/93‑1 (MQ=255)
cGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTg > 1:4120959/1‑93 (MQ=255)
tGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCt < 2:912736/93‑1 (MQ=255)
tGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCt < 2:2206762/93‑1 (MQ=255)
tATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGAAGTGATCTCGCTGCCCCTgg > 1:2441252/1‑93 (MQ=255)
aTTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGt > 1:4735786/1‑93 (MQ=255)
ttAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGtt > 2:226686/1‑93 (MQ=255)
tAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGCTCTCGCTGCCCCTGGttt > 2:2846872/1‑92 (MQ=255)
gCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCtt > 2:3451591/1‑93 (MQ=255)
cAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCttt < 1:618415/93‑1 (MQ=255)
cAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCttt > 1:3838693/1‑93 (MQ=255)
aGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTa < 1:556007/93‑1 (MQ=255)
aGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTa < 1:1294224/93‑1 (MQ=255)
gACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTAt > 1:1663273/1‑93 (MQ=255)
gTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTg > 1:1173168/1‑93 (MQ=255)
tCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGa > 1:4418546/1‑93 (MQ=255)
cAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTgca > 2:3160695/1‑91 (MQ=255)
aaaCTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGaaa < 2:2381422/93‑1 (MQ=255)
aaaCTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGaaa > 2:1550972/1‑93 (MQ=255)
aaaCTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGaaa > 2:3880616/1‑93 (MQ=255)
aaCTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGCAAt > 1:122365/1‑93 (MQ=255)
aaCTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAAt < 1:3223168/93‑1 (MQ=255)
cTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTg > 1:842495/1‑93 (MQ=255)
ttCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCa > 2:935348/1‑93 (MQ=255)
ttCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCa > 2:442519/1‑93 (MQ=255)
tCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCAt > 1:1382317/1‑93 (MQ=255)
cATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCAtt < 2:3673138/93‑1 (MQ=255)
aTCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTc > 1:1689863/1‑93 (MQ=255)
aTCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTc > 2:3769240/1‑93 (MQ=255)
tCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCa > 1:3451434/1‑93 (MQ=255)
cGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCaa < 2:2671248/93‑1 (MQ=255)
cGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCaa < 2:1354705/93‑1 (MQ=255)
gCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAAc > 1:499422/1‑93 (MQ=255)
ccTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAAc < 1:3555473/92‑1 (MQ=255)
tGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTg < 1:2765509/93‑1 (MQ=255)
gACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGa > 1:1852533/1‑93 (MQ=255)
gcAGAACTCACCGCAAAATACCTTCGCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGAc < 2:1624804/92‑1 (MQ=255)
aCAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGAc < 2:2367392/93‑1 (MQ=255)
cAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACg > 2:2046013/1‑93 (MQ=255)
cAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACg < 1:2861568/93‑1 (MQ=255)
aGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACgg > 1:403873/1‑93 (MQ=255)
aGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACgg > 2:2449500/1‑93 (MQ=255)
aGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACgg < 2:2667909/93‑1 (MQ=255)
gAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGa > 1:2262957/1‑93 (MQ=255)
gAACTCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGa < 1:3686747/93‑1 (MQ=255)
cTCCCCGCAAAAGACCTTCTCGGTTAATGACCGGATGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTa < 2:2039895/93‑1 (MQ=255)
tcgccGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTaa > 2:1071834/4‑93 (MQ=255)
tCACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTaa < 1:3475405/93‑1 (MQ=255)
cACCGCAAAAGACCTTCTCGGTTAATTACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAAt < 1:4631865/93‑1 (MQ=255)
cACCGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAAt > 1:2101901/1‑93 (MQ=255)
ccGCAAAAGACCTCCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCg < 1:4716126/93‑1 (MQ=255)
cGCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGt < 1:2538621/93‑1 (MQ=255)
gCAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTc < 1:3036312/93‑1 (MQ=255)
cAAAAGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCa > 1:2841167/1‑93 (MQ=255)
aaaaGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCaa < 1:4429764/93‑1 (MQ=255)
aaaaGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCaa < 1:3518002/93‑1 (MQ=255)
aaaGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAAt > 2:2168862/1‑93 (MQ=255)
aaaGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAAt < 2:2030614/93‑1 (MQ=255)
aaGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAAtt > 2:2082991/1‑93 (MQ=255)
aaGACCTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAAtt > 2:770916/1‑93 (MQ=255)
ccTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAag < 2:368390/93‑1 (MQ=255)
ccTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAag < 2:4116888/93‑1 (MQ=255)
ccTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAag < 1:42762/93‑1 (MQ=255)
cTTCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAaga < 1:1785776/93‑1 (MQ=255)
ttCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAagag > 1:2776954/1‑93 (MQ=255)
ttCTCGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAagag < 2:1113641/93‑1 (MQ=255)
tcGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGaaa < 1:2949956/93‑1 (MQ=255)
tcGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGaaa > 1:3676915/1‑93 (MQ=255)
tcGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGaaa > 2:1985132/1‑93 (MQ=255)
cGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAag < 2:3197092/93‑1 (MQ=255)
cGGTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAag < 2:4148094/93‑1 (MQ=255)
ggTTAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAaga < 2:1160591/93‑1 (MQ=255)
ggtAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAagag > 2:4640718/3‑93 (MQ=255)
ttAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGt < 2:4718238/93‑1 (MQ=255)
ttAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGt > 2:4074023/1‑93 (MQ=255)
ttAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGt > 1:2804711/1‑93 (MQ=255)
tAATGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGtt < 1:1965368/93‑1 (MQ=255)
tGACCGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTaca < 2:4476747/93‑1 (MQ=255)
gACCGGGGGCAGTGATCTCGCTGCCCGTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTacac < 2:4421849/93‑1 (MQ=255)
|
AGCGCAAAATGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACAC > NC_000913/1807988‑1808166
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGAAGCGCAAAATGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑AGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACACCGT > NC_000913/1807985‑1808169
|
AGAAGCGCAAAATGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑G > SRR4302544.4685220/1‑94 (MQ=60)
AGAAGCGCAAAATGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑G > SRR4302544.2948411/1‑94 (MQ=60)
AAGCGCAAAATGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGG < SRR4302544.4043573/94‑1 (MQ=60)
CGCAAAATGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGC > SRR4302544.1009458/1‑94 (MQ=60)
CGCAAAATGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGC < SRR4302544.1089745/94‑1 (MQ=60)
CAAAATGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAG > SRR4302544.140914/1‑94 (MQ=60)
CAAAATGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GCGGGCAG > SRR4302544.1026698/1‑94 (MQ=60)
AAAATGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGT > SRR4302544.3103637/1‑94 (MQ=60)
AAAATGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGT < SRR4302544.2011919/94‑1 (MQ=60)
AAATGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTG > SRR4302544.2635093/1‑94 (MQ=60)
TGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATC < SRR4302544.551805/94‑1 (MQ=60)
GATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCGGTGATCT > SRR4302544.1985336/1‑94 (MQ=60)
ATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTC > SRR4302544.1414724/1‑94 (MQ=60)
TCCACGTTTTGTATTAGCAGACTTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCG < SRR4302544.1029581/94‑1 (MQ=60)
CCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAACAGACCTTCTCGGTTAATGACC‑GGGAGCAGTGATCTCGC > SRR4302544.3942222/1‑94 (MQ=60)
CCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGC > SRR4302544.355325/1‑94 (MQ=60)
CACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCT > SRR4302544.2186077/1‑94 (MQ=60)
CACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCT < SRR4302544.1348705/94‑1 (MQ=60)
CACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCT < SRR4302544.2625848/94‑1 (MQ=60)
CACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCT > SRR4302544.4764840/1‑94 (MQ=60)
CACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCT < SRR4302544.4691197/94‑1 (MQ=60)
ACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTG < SRR4302544.2530550/94‑1 (MQ=60)
ACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTG > SRR4302544.4161861/1‑94 (MQ=60)
TTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCC > SRR4302544.366953/1‑94 (MQ=60)
TTTTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCT < SRR4302544.485102/94‑1 (MQ=60)
TTNTNNNANNAGACGTCNAANNNTCNTCGCTGACAGAACTCACCGCAAAAGACCTTCTNGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCT < SRR4302544.455822/94‑1 (MQ=60)
GTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGAAGTGATCTCGCTGCCCCTGG > SRR4302544.2464532/1‑94 (MQ=60)
TATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGT > SRR4302544.4782475/1‑94 (MQ=60)
AGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTT > SRR4302544.3717092/1‑94 (MQ=60)
GCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTT > SRR4302544.3876760/1‑94 (MQ=60)
CAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTA < SRR4302544.18320/94‑1 (MQ=60)
CAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTA < SRR4302544.624487/94‑1 (MQ=60)
AGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTAT > SRR4302544.1679649/1‑94 (MQ=60)
AGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTAT < SRR4302544.561447/94‑1 (MQ=60)
AGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTAT < SRR4302544.1306969/94‑1 (MQ=60)
GACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATC > SRR4302544.114928/1‑94 (MQ=60)
ACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCT > SRR4302544.967866/1‑94 (MQ=60)
CGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTG > SRR4302544.1184871/1‑94 (MQ=60)
GTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGA > SRR4302544.4463136/1‑94 (MQ=60)
GTCAAACTTTAATCGCTGACAGAACTCAACGCAAAAGACCTTCTAGGTTCATGACA‑GGAGGACGTGATCTCGCTGCCCCTGGTTCTTTATCTGA > SRR4302544.4463137/1‑94 (MQ=53)
TCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAA > SRR4302544.3501063/1‑94 (MQ=60)
CAAACTTTCATCGCTGACAGAACTCACCGCAAAAGCCCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAA < SRR4302544.306451/94‑1 (MQ=60)
CAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAA > SRR4302544.2091477/1‑94 (MQ=60)
AAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGCAAT > SRR4302544.123479/1‑94 (MQ=60)
AAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAAT > SRR4302544.2127226/1‑94 (MQ=60)
AAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAAT > SRR4302544.2775425/1‑94 (MQ=60)
AACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATT < SRR4302544.3253941/94‑1 (MQ=60)
AACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCGNCNCCTTGTTTTTTATNTGAANTN > SRR4302544.4098209/1‑94 (MQ=60)
ACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTG > SRR4302544.850814/1‑94 (MQ=60)
CTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGC > SRR4302544.107536/1‑94 (MQ=60)
TTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCA < SRR4302544.2823450/94‑1 (MQ=60)
TTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCAT > SRR4302544.1396125/1‑94 (MQ=60)
CATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTC > SRR4302544.1706530/1‑94 (MQ=60)
CATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTC < SRR4302544.632867/94‑1 (MQ=60)
ATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCA > SRR4302544.3484388/1‑94 (MQ=60)
CGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAAC > SRR4302544.504331/1‑94 (MQ=60)
CCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACT < SRR4302544.3589547/94‑1 (MQ=60)
TGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGA < SRR4302544.2792108/94‑1 (MQ=60)
TGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGA > SRR4302544.1870454/1‑94 (MQ=60)
ACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCTCCTGGTTCTTTATCTGAAATTGCATTCAACTGACG < SRR4302544.169347/94‑1 (MQ=60)
ACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCGTGGTTCTTTATCTGAAATTGCATTCAACTGACG < SRR4302544.586551/94‑1 (MQ=60)
CAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGG < SRR4302544.2889187/94‑1 (MQ=60)
CAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGG > SRR4302544.407975/1‑94 (MQ=60)
AGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGA < SRR4302544.3557171/94‑1 (MQ=60)
AGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGA > SRR4302544.2284241/1‑94 (MQ=60)
GAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGAT < SRR4302544.3723501/94‑1 (MQ=60)
TCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAAT > SRR4302544.2122129/1‑94 (MQ=60)
TCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAAT > SRR4302544.1707164/1‑94 (MQ=60)
TCACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAAT < SRR4302544.3508548/94‑1 (MQ=60)
CACCGCAAAAGACCTTCTCGGTTAATTACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATC < SRR4302544.4677774/94‑1 (MQ=60)
CACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATC > SRR4302544.2211556/1‑94 (MQ=60)
ACCGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCG < SRR4302544.3778194/94‑1 (MQ=60)
CCGCAAAAGACCTCCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGT < SRR4302544.4762717/94‑1 (MQ=60)
CGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTC < SRR4302544.287648/94‑1 (MQ=60)
CGCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTC < SRR4302544.2562999/94‑1 (MQ=60)
GCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCA < SRR4302544.3065380/94‑1 (MQ=60)
GCAAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCA > SRR4302544.2868595/1‑94 (MQ=60)
AAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAAT < SRR4302544.4474462/94‑1 (MQ=60)
AAAAGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAAT < SRR4302544.3551595/94‑1 (MQ=60)
AAGACCTTCTCGGTCAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTT < SRR4302544.1257276/94‑1 (MQ=60)
AGACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTA < SRR4302544.4497093/94‑1 (MQ=60)
GACCTTCTCGGTTAATGGCCGGGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTA < SRR4302544.4704920/94‑1 (MQ=60)
GACCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAA > SRR4302544.3448585/1‑94 (MQ=60)
CCTTCTCGGTTGATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGA < SRR4302544.2287603/94‑1 (MQ=60)
CCTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGA < SRR4302544.43182/94‑1 (MQ=60)
CTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAG > SRR4302544.4375943/1‑94 (MQ=60)
CTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAG < SRR4302544.1803233/94‑1 (MQ=60)
CTTCTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAG > SRR4302544.2803665/1‑94 (MQ=60)
CTCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAA > SRR4302544.3713589/1‑94 (MQ=60)
TCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAG > SRR4302544.1955458/1‑94 (MQ=60)
TCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAG < SRR4302544.2978291/94‑1 (MQ=60)
TCGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTACATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAG < SRR4302544.4175803/94‑1 (MQ=60)
CGGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGA < SRR4302544.1230157/94‑1 (MQ=60)
GGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAG < SRR4302544.1651871/94‑1 (MQ=60)
GGTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAG > SRR4302544.2898901/1‑94 (MQ=60)
GTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGT > SRR4302544.2831752/1‑94 (MQ=60)
GTTAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGT > SRR4302544.2831751/1‑94 (MQ=60)
TAATGACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTA < SRR4302544.1984454/94‑1 (MQ=60)
ACC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACACCG > SRR4302544.20315/1‑94 (MQ=60)
CC‑GGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACACCGT > SRR4302544.4619427/1‑94 (MQ=60)
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AGAAGCGCAAAATGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATGACC‑AGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACACCGT > NC_000913/1807985‑1808169
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
