Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,865,362 |
T→C |
V144A (GTC→GCC) |
yeaG → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,865,362 | 0 | T | C | 99.3%
| 451.7
/ NA
| 142 | V144A (GTC→GCC) | yeaG | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (68/73); minor base A (0/1); total (68/74) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 146 total aligned reads displayed.
GGGTAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCA > NC_000913/1865273‑1865451
|
ggTAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAAc < 2:3922289/93‑1 (MQ=255)
ggTAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGACCGGCCAAc > 1:3841387/1‑93 (MQ=255)
ggTAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGACCGGCCAAc > 1:3841388/1‑93 (MQ=255)
gTAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACg > 1:2972131/1‑93 (MQ=255)
tAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGa > 2:2500362/1‑93 (MQ=255)
aaaTCATCGCTTGCGGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGat < 1:1751597/93‑1 (MQ=255)
aaTCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGatc < 1:3514315/93‑1 (MQ=255)
atcatcGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGatca < 2:2053269/93‑1 (MQ=255)
atcatcGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGatca > 1:4125073/1‑93 (MQ=255)
catcGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGatcatc < 1:994597/93‑1 (MQ=255)
atcGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATcc < 1:4506826/93‑1 (MQ=255)
tcGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCg > 2:1548291/1‑93 (MQ=255)
gCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGtt < 1:3360169/93‑1 (MQ=255)
gCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGtt > 1:2371640/1‑93 (MQ=255)
cTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTc > 1:3375224/1‑93 (MQ=255)
tGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCt > 1:1196436/1‑93 (MQ=255)
gAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCtt < 2:3287227/93‑1 (MQ=255)
aGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCttt > 1:2926093/1‑93 (MQ=255)
aCTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCaa > 1:1847289/1‑93 (MQ=255)
aCTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCaa < 2:815056/93‑1 (MQ=255)
aCTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCaa > 1:3767887/1‑93 (MQ=255)
tGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAATGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATc < 2:1285742/93‑1 (MQ=255)
tGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATc < 1:311908/93‑1 (MQ=255)
tGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATc < 1:311907/93‑1 (MQ=255)
gAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATcc < 2:2704334/93‑1 (MQ=255)
gAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATcc < 1:4335460/93‑1 (MQ=255)
gAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATcc > 2:2331493/1‑93 (MQ=255)
gAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATcc < 1:590610/93‑1 (MQ=255)
gAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATcc > 1:548692/1‑93 (MQ=255)
aaaTCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCg > 2:4326114/1‑93 (MQ=255)
aTCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCa < 1:1689609/93‑1 (MQ=255)
aTCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCa > 2:677090/1‑93 (MQ=255)
aTCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCa < 1:2741932/93‑1 (MQ=255)
tCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAg < 2:864999/93‑1 (MQ=255)
cATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAgg > 2:4251396/1‑93 (MQ=255)
aTTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGa > 2:2015198/1‑93 (MQ=255)
aTTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGa < 1:2873341/93‑1 (MQ=255)
aTTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGa > 2:4215471/1‑93 (MQ=255)
ttAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGaa < 1:113790/93‑1 (MQ=255)
tAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAg < 2:543588/93‑1 (MQ=255)
tAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAg > 1:1512489/1‑93 (MQ=255)
aaTGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGa < 1:2586619/93‑1 (MQ=255)
aaTGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGa < 1:495817/93‑1 (MQ=255)
aaTGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGa < 1:495816/93‑1 (MQ=255)
aTGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGAt < 1:3186742/93‑1 (MQ=255)
tGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATg > 2:2806131/1‑93 (MQ=255)
tGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATg < 2:3452377/93‑1 (MQ=255)
ggaGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATgc < 1:1444527/91‑1 (MQ=255)
gCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATgc > 2:528093/1‑93 (MQ=255)
aGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATgcgc > 2:4655202/1‑93 (MQ=255)
gCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCa < 2:20146/93‑1 (MQ=255)
cTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAg < 1:1852619/93‑1 (MQ=255)
tCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGa > 2:3326944/1‑93 (MQ=255)
aCCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCt < 1:2489996/93‑1 (MQ=255)
aCCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCt < 1:2489995/93‑1 (MQ=255)
ccGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTg > 1:4548735/1‑93 (MQ=255)
ccGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTg > 2:4568747/1‑93 (MQ=255)
gATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGa < 1:4666903/93‑1 (MQ=255)
tttATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTATTTTCAATACGCAGGAAGATGCGCAGATTCTGGaaa > 2:2552030/1‑93 (MQ=255)
ttATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGaaaa > 1:2994872/1‑93 (MQ=255)
tATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGaaaaa < 1:1060436/93‑1 (MQ=255)
tGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAaga < 1:3440678/93‑1 (MQ=255)
tGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAaga < 1:421470/93‑1 (MQ=255)
tGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAaga < 1:52784/93‑1 (MQ=255)
tGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAaga < 1:1977854/93‑1 (MQ=255)
tATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGt < 1:3036309/93‑1 (MQ=255)
ttagAGCGCGAACGGTGAGCGTAGCTCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTa < 1:2302129/90‑1 (MQ=255)
aTTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTa < 2:4285660/93‑1 (MQ=255)
aTTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTa < 1:1770685/93‑1 (MQ=255)
ttGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGCTTCTGGAAAAAGAGTAt > 2:3744911/1‑93 (MQ=255)
ttGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTAt > 2:2059831/1‑93 (MQ=255)
ttGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTAt < 2:4059906/93‑1 (MQ=255)
ttGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTAt > 1:4114639/1‑93 (MQ=255)
tGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATg < 2:2166566/93‑1 (MQ=255)
aGCGCGATCGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTATTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGc < 1:1595022/93‑1 (MQ=255)
aGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGc > 1:3661247/1‑93 (MQ=255)
gcgcGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGct > 1:423315/1‑92 (MQ=255)
gcgAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCAtt > 2:2841152/1‑93 (MQ=255)
gcgAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCAtt > 2:710163/1‑93 (MQ=255)
cgAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTc > 1:2900123/1‑93 (MQ=255)
gAACGGTGAGCGTAGCCCGGACAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTcc < 1:2234236/93‑1 (MQ=255)
aaCGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCt > 2:279075/1‑93 (MQ=255)
aCGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTc < 2:4361964/93‑1 (MQ=255)
aCGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTc > 2:1566035/1‑93 (MQ=255)
ggTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGc < 1:3220304/93‑1 (MQ=255)
gTGAGCGTAGCCGGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGcc < 1:2053191/93‑1 (MQ=255)
gTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGcc > 1:2604149/1‑93 (MQ=255)
gTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGcc > 2:177786/1‑93 (MQ=255)
gAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGt < 1:3598858/93‑1 (MQ=255)
gAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGt > 2:3479383/1‑93 (MQ=255)
aGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGtt < 2:291812/93‑1 (MQ=255)
gCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTa < 1:1306389/93‑1 (MQ=255)
gCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTa < 2:83767/93‑1 (MQ=255)
gTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTAtc < 1:1134141/93‑1 (MQ=255)
tAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGGATGGCATTCCTCGCCGTTAtct > 2:1127948/1‑93 (MQ=255)
gCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCg < 2:3519780/93‑1 (MQ=255)
ccGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGc < 2:1854529/93‑1 (MQ=255)
ccGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGc > 2:1819416/1‑93 (MQ=255)
ccGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGc < 2:1261656/93‑1 (MQ=255)
cGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCa > 2:873621/1‑93 (MQ=255)
|
GGGTAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCA > NC_000913/1865273‑1865451
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTGGGGGTAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCG > NC_000913/1865269‑1865448
|
GTGGGGGTAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGC < SRR4302544.1533604/94‑1 (MQ=60)
TGGGGGTAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCC < SRR4302544.4183570/94‑1 (MQ=60)
GGGGGTAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCA < SRR4302544.297503/94‑1 (MQ=60)
GGGGGTAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCA < SRR4302544.1367057/94‑1 (MQ=60)
GGGTAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGACCGGCCAAC > SRR4302544.3879497/1‑94 (MQ=60)
GGGTAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGACCGGCCAAC > SRR4302544.3879496/1‑94 (MQ=60)
GGTAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACG > SRR4302544.3000632/1‑94 (MQ=60)
GTAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGA > SRR4302544.482274/1‑94 (MQ=60)
TAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGAT < SRR4302544.4368638/94‑1 (MQ=60)
AAATCATCGCTTGCGGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATC < SRR4302544.1768742/94‑1 (MQ=60)
AATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCA > SRR4302544.4165995/1‑94 (MQ=60)
AATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCA < SRR4302544.3547851/94‑1 (MQ=60)
TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATC < SRR4302544.2490650/94‑1 (MQ=60)
CATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCC > SRR4302544.228309/1‑94 (MQ=60)
CATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCC < SRR4302544.1004433/94‑1 (MQ=60)
ATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCG < SRR4302544.4552015/94‑1 (MQ=60)
CGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTT < SRR4302544.2909515/94‑1 (MQ=60)
CGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTT > SRR4302544.2394084/1‑94 (MQ=60)
GCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTC < SRR4302544.3392233/94‑1 (MQ=60)
GCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTC > SRR4302544.3407446/1‑94 (MQ=60)
GCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTC > SRR4302544.3407447/1‑94 (MQ=60)
CTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCT > SRR4302544.1208295/1‑94 (MQ=60)
TGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTT < SRR4302544.3356231/94‑1 (MQ=60)
GAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTT < SRR4302544.3614068/94‑1 (MQ=60)
GAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTT > SRR4302544.2954220/1‑94 (MQ=60)
CGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCA > SRR4302544.2748905/1‑94 (MQ=60)
GACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAA > SRR4302544.1865174/1‑94 (MQ=60)
GACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAA > SRR4302544.3805250/1‑94 (MQ=60)
CTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATC > SRR4302544.4170718/1‑94 (MQ=60)
TGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCC < SRR4302544.315150/94‑1 (MQ=60)
TGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCC > SRR4302544.554072/1‑94 (MQ=60)
TGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCC < SRR4302544.315151/94‑1 (MQ=60)
GAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCG < SRR4302544.4379589/94‑1 (MQ=60)
GAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCG < SRR4302544.596411/94‑1 (MQ=60)
GAAATCATTAACGCAGCCAGTATCGATTCATGTATTCAGTGCGAGCGGTGAGCGTAGTCCGCCTAACGATCATCCGTTCTGTCTTTTCAATCCG < SRR4302544.596410/94‑1 (MQ=23)
AATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCA > SRR4302544.3923647/1‑94 (MQ=60)
ATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAG < SRR4302544.2768357/94‑1 (MQ=60)
ATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAG < SRR4302544.4555427/94‑1 (MQ=60)
ATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAG < SRR4302544.1706276/94‑1 (MQ=60)
TCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGG < SRR4302544.3194789/94‑1 (MQ=60)
ATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAA < SRR4302544.2901073/94‑1 (MQ=60)
TTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAG < SRR4302544.114827/94‑1 (MQ=60)
TTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAG > SRR4302544.1527479/1‑94 (MQ=60)
AATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGAT < SRR4302544.500691/94‑1 (MQ=60)
AATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGAT < SRR4302544.2611498/94‑1 (MQ=60)
AATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGAT < SRR4302544.1153885/94‑1 (MQ=60)
AATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGAT < SRR4302544.500690/94‑1 (MQ=60)
ATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATG < SRR4302544.3217090/94‑1 (MQ=60)
GGAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCG < SRR4302544.1458901/94‑1 (MQ=60)
CTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGA < SRR4302544.1870541/94‑1 (MQ=60)
ACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTG < SRR4302544.2513846/94‑1 (MQ=60)
ACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTG < SRR4302544.2513847/94‑1 (MQ=60)
ACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTG > SRR4302544.4594161/1‑94 (MQ=60)
CCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCCACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAAATTCTGG > SRR4302544.723916/1‑94 (MQ=60)
CGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGA > SRR4302544.543741/1‑94 (MQ=60)
GATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAA < SRR4302544.4713050/94‑1 (MQ=60)
GATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAA > SRR4302544.1350413/1‑94 (MQ=60)
ATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAA > SRR4302544.3022074/1‑94 (MQ=60)
TTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAA > SRR4302544.3023584/1‑94 (MQ=60)
TATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAG < SRR4302544.1070968/94‑1 (MQ=60)
TGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAG < SRR4302544.53321/94‑1 (MQ=60)
TGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAG < SRR4302544.3473565/94‑1 (MQ=60)
TGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAG < SRR4302544.1997073/94‑1 (MQ=60)
TGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAG < SRR4302544.425774/94‑1 (MQ=60)
TATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTA < SRR4302544.3065377/94‑1 (MQ=60)
ttaGAGCGCGAACGGTGAGCGTAGCTCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTAT < SRR4302544.2323867/91‑1 (MQ=60)
ATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTAT < SRR4302544.1547756/94‑1 (MQ=60)
ATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTAT > SRR4302544.381337/1‑94 (MQ=60)
ATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTAT > SRR4302544.4155517/1‑94 (MQ=60)
ATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTAT < SRR4302544.1788014/94‑1 (MQ=60)
TTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATG < SRR4302544.1719590/94‑1 (MQ=60)
GAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGC > SRR4302544.3697767/1‑94 (MQ=60)
AGCGCGATCGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTATTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCA < SRR4302544.1610731/94‑1 (MQ=60)
AGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCT > SRR4302544.427629/1‑94 (MQ=60)
GCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTC > SRR4302544.2928049/1‑94 (MQ=60)
CGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCC > SRR4302544.2031240/1‑94 (MQ=60)
GAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCT > SRR4302544.1802534/1‑94 (MQ=60)
GAACGGTGAGCGTAGCCCGGACAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCT < SRR4302544.2255251/94‑1 (MQ=60)
GGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCC < SRR4302544.3251032/94‑1 (MQ=60)
GGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCC > SRR4302544.2629168/1‑94 (MQ=60)
GTGAGCGTAGCCGGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCG < SRR4302544.2072953/94‑1 (MQ=60)
GAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTT < SRR4302544.3633572/94‑1 (MQ=60)
GCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTAT < SRR4302544.1319230/94‑1 (MQ=60)
GTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCT > SRR4302544.2526830/1‑94 (MQ=60)
GTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCT < SRR4302544.1145429/94‑1 (MQ=60)
AGCCCGGCAAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCG < SRR4302544.311747/94‑1 (MQ=60)
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GTGGGGGTAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCG > NC_000913/1865269‑1865448
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
