Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,309,476 |
C→T |
A27T (GCC→ACC) |
yojL ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,309,476 | 0 | C | T | 97.7%
| 451.1
/ ‑3.2
| 133 | A27T (GCC→ACC) | yojL | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (1/2); new base T (67/63); total (68/65) |
| Fisher's exact test for biased strand distribution p-value = 6.14e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 |
Only 100 of 137 total aligned reads displayed.
GTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGCGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTATCCT > NC_000913/2309386‑2309567
|
gTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTtggtgg < 2:2505920/93‑1 (MQ=255)
tttGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTggg < 2:1617966/93‑1 (MQ=255)
ggCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTtg > 1:3957718/1‑93 (MQ=255)
gCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTTCCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGtttt < 2:4744814/93‑3 (MQ=255)
gCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTtgt < 1:1557589/93‑1 (MQ=255)
gCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTtgt > 1:4106128/1‑93 (MQ=255)
cGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTtgtg < 2:2111411/93‑1 (MQ=255)
tCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGggtggtggt > 2:1610777/1‑93 (MQ=255)
tCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGt < 1:2787498/93‑1 (MQ=255)
cAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGtt < 1:1103297/93‑1 (MQ=255)
tGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGttttt < 1:102507/93‑1 (MQ=255)
gCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTg < 1:1909717/93‑1 (MQ=255)
gCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTg < 1:4301417/93‑1 (MQ=255)
cccGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGa < 1:877568/93‑1 (MQ=255)
ccGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGAt < 1:2218852/93‑1 (MQ=255)
ccGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGAt < 1:4181978/93‑1 (MQ=255)
cGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATc > 2:885688/1‑93 (MQ=255)
gggATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCg > 1:2079943/1‑93 (MQ=255)
gggATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCg > 1:326199/1‑93 (MQ=255)
ggATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGc > 1:3793023/1‑93 (MQ=255)
gATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGca > 2:3322034/1‑93 (MQ=255)
aTGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGcaa < 2:3751444/93‑1 (MQ=255)
aTGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGcaa > 1:4058669/1‑93 (MQ=255)
tGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGcaac > 2:2106517/1‑93 (MQ=255)
cTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGcaacca < 2:3007373/93‑1 (MQ=255)
tGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGcaaccaa < 2:3116041/93‑1 (MQ=255)
ggCACTCCAGAAAGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGcacccaac < 2:1504107/93‑1 (MQ=255)
ggCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGATTTGGTGGGCTGGGGTTTTTGATCGcaaacaac > 2:1927486/1‑93 (MQ=255)
aCGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACaaa < 1:1370700/93‑1 (MQ=255)
gCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAaaga > 2:4404027/1‑93 (MQ=255)
gCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAaaga < 1:3097007/93‑1 (MQ=255)
ccAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAaagaa < 1:4225937/93‑1 (MQ=255)
ccAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAaagaa < 2:1199179/93‑1 (MQ=255)
cAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAaagaag < 1:2111998/93‑1 (MQ=255)
cAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAaagaag < 2:3443202/93‑1 (MQ=255)
cAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAaagaag < 2:4723727/93‑1 (MQ=255)
cAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAaagaag < 2:2890420/93‑1 (MQ=255)
cAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAaagaag > 2:367975/1‑93 (MQ=255)
cAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAaagaag < 1:2401508/93‑1 (MQ=255)
cAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAaagaag > 1:3106751/1‑93 (MQ=255)
aGAAGGTTCCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAagaaga < 2:721065/93‑1 (MQ=255)
aGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAagaaga < 2:1156441/93‑1 (MQ=255)
aaGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAgc < 1:3899119/93‑1 (MQ=255)
aGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAgcg > 1:4683516/1‑93 (MQ=255)
aGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAgcg > 1:4683517/1‑93 (MQ=255)
ggTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAgcgc > 2:3940011/1‑93 (MQ=255)
cccATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGca > 2:3323070/1‑93 (MQ=255)
cccATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAACAGCGCGGca > 2:3330971/1‑93 (MQ=255)
ccATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGcag > 1:2505949/1‑93 (MQ=255)
tAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGcagcca < 1:2214596/93‑1 (MQ=255)
gTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGcagccagc > 1:3901496/1‑93 (MQ=255)
ttttGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCcagca > 1:59479/1‑93 (MQ=255)
ttttGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCcagca > 2:507634/1‑93 (MQ=255)
ttttGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCcagca > 1:1229576/1‑93 (MQ=255)
ttttGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCcagca > 1:374458/1‑93 (MQ=255)
ttttGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAAACAACAAACAAGAGCCCGGAAGCcagca > 1:374321/1‑93 (MQ=255)
tttGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCcagcag < 2:148170/93‑1 (MQ=255)
tttGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCcagcag < 2:78950/93‑1 (MQ=255)
gCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGc > 2:2827987/1‑93 (MQ=255)
ccTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGcc > 1:3058126/1‑93 (MQ=255)
cTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCa < 2:1050722/93‑1 (MQ=255)
cTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCa > 1:3051160/1‑93 (MQ=255)
cTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCa > 1:2242112/1‑93 (MQ=255)
ttCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCAc > 1:147756/1‑93 (MQ=255)
ttCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCAc > 2:2158408/1‑93 (MQ=255)
tCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCAcg < 1:764814/93‑1 (MQ=255)
tCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCAcg > 1:2873102/1‑93 (MQ=255)
tCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCAcg > 2:4338818/1‑93 (MQ=255)
aaGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCCcgcg < 2:3646655/93‑1 (MQ=255)
aaGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCAcgcg < 1:1774515/93‑1 (MQ=255)
aaGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCAcgcg < 1:2328635/93‑1 (MQ=255)
aaGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCAcgcg < 1:923699/93‑1 (MQ=255)
aaGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCAcgcg > 2:1965443/1‑93 (MQ=255)
aGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCTGTGCCACGCgg > 2:2327160/1‑93 (MQ=255)
gAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCggg < 1:588539/93‑1 (MQ=255)
gAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCggg < 2:2499352/93‑1 (MQ=255)
ggTAACTTCAGTAGCGTGGGTTTTGGCGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTaaa < 2:4132547/93‑1 (MQ=255)
gTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCCGTGCCGCGCGGGTacac > 1:1653316/1‑90 (MQ=255)
gTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAg > 2:3539183/1‑93 (MQ=255)
gTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAg > 1:2204911/1‑93 (MQ=255)
gTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAg > 2:2571164/1‑93 (MQ=255)
aCTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCtt < 2:2384346/93‑1 (MQ=255)
aCTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCtt > 1:3507023/1‑93 (MQ=255)
aCTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCtt > 1:2854466/1‑93 (MQ=255)
cTTCAGTAGCGTGTGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTa < 2:556084/93‑1 (MQ=255)
cTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTa < 1:271519/93‑1 (MQ=255)
tCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTAtt < 2:3225229/93‑1 (MQ=255)
ggCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCAt > 1:3240701/2‑93 (MQ=255)
gCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATa < 2:3026813/93‑1 (MQ=255)
gCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATa > 2:1705373/1‑93 (MQ=255)
gCGTGGGTTTTGGCGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATa > 2:741505/1‑93 (MQ=255)
cGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATAc < 1:3185319/93‑1 (MQ=255)
cGTGGGGTTTGGTGGGTTGTGGTTTTTGACCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATAc < 1:3185318/93‑1 (MQ=255)
gTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACg > 1:4298260/1‑93 (MQ=255)
tGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGt > 2:3088583/1‑93 (MQ=255)
ggTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGa < 2:2786394/93‑1 (MQ=255)
gTTTTGGTGGTTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGAt < 2:2030095/93‑1 (MQ=255)
gTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGAt > 1:59908/1‑93 (MQ=255)
ttGGTGGGTTGTGGTTTTTGATCGCACCCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTAt < 1:4400942/93‑1 (MQ=255)
ggCGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTATcc < 2:4111252/93‑1 (MQ=255)
|
GTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGCGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTATCCT > NC_000913/2309386‑2309567
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGCGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTATCCTCA > NC_000913/2309385‑2309569
|
CGTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGG < SRR4302544.2096788/94‑1 (MQ=60)
GTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGG > SRR4302544.545451/1‑94 (MQ=60)
TGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTG > SRR4302544.3997069/1‑94 (MQ=60)
GGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGT > SRR4302544.4146961/1‑94 (MQ=60)
GCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTG < SRR4302544.1245598/94‑1 (MQ=60)
GCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTG < SRR4302544.1573078/94‑1 (MQ=60)
TCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTT < SRR4302544.2814326/94‑1 (MQ=60)
CAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTT < SRR4302544.1114285/94‑1 (MQ=60)
TGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTG < SRR4302544.103443/94‑1 (MQ=60)
GCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGA < SRR4302544.4345299/94‑1 (MQ=60)
GCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGA < SRR4302544.1928174/94‑1 (MQ=60)
CCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGAT < SRR4302544.886274/94‑1 (MQ=60)
CCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATC < SRR4302544.2239722/94‑1 (MQ=60)
CCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATC < SRR4302544.2239723/94‑1 (MQ=60)
CCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATC < SRR4302544.4223392/94‑1 (MQ=60)
CGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCG > SRR4302544.2099932/1‑94 (MQ=60)
CGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCG > SRR4302544.329593/1‑94 (MQ=60)
GGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGC > SRR4302544.3830576/1‑94 (MQ=60)
GATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAA > SRR4302544.4099093/1‑94 (MQ=60)
GATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAA > SRR4302544.412218/1‑94 (MQ=60)
ATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAAC > SRR4302544.3227459/1‑94 (MQ=60)
ACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAG < SRR4302544.1384347/94‑1 (MQ=60)
GCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAA < SRR4302544.3126498/94‑1 (MQ=60)
CCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAG < SRR4302544.4268923/94‑1 (MQ=60)
CCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAG > SRR4302544.3136324/1‑94 (MQ=60)
CCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAG > SRR4302544.3136323/1‑94 (MQ=60)
CAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGA < SRR4302544.2132303/94‑1 (MQ=60)
CAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGA < SRR4302544.2424292/94‑1 (MQ=60)
AAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCG < SRR4302544.3937849/94‑1 (MQ=60)
AAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCG > SRR4302544.4729813/1‑94 (MQ=60)
AAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCG > SRR4302544.4729814/1‑94 (MQ=60)
AAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCG < SRR4302544.2210851/94‑1 (MQ=60)
ACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCA > SRR4302544.2523775/1‑94 (MQ=60)
CCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAG > SRR4302544.2529978/1‑94 (MQ=60)
CATAGTTTGGCCTTCAAGAACGGTACCTTCAGTAGCGTGGGTTTGGGTGGGTGGT‑GTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCA < SRR4302544.724436/94‑1 (MQ=60)
TAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAG < SRR4302544.2235431/94‑1 (MQ=60)
AGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGC > SRR4302544.3940251/1‑94 (MQ=60)
GTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCA > SRR4302544.60084/1‑94 (MQ=60)
GTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCA > SRR4302544.1241739/1‑94 (MQ=60)
GTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCA > SRR4302544.378281/1‑94 (MQ=60)
GTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAAACAACAAACAAGAGCCCGGAAGCCAGCA > SRR4302544.378143/1‑94 (MQ=60)
GCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCC > SRR4302544.3087313/1‑94 (MQ=60)
CCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCA > SRR4302544.3080309/1‑94 (MQ=60)
CCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCA < SRR4302544.2742884/94‑1 (MQ=60)
CCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCA > SRR4302544.2263204/1‑94 (MQ=60)
CTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCAC > SRR4302544.149167/1‑94 (MQ=60)
CGTCAAGAACGGTAACTGCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTGTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCAC < SRR4302544.2186433/94‑1 (MQ=60)
TTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACG > SRR4302544.2900832/1‑94 (MQ=60)
TCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGC < SRR4302544.772266/94‑1 (MQ=60)
TCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGC > SRR4302544.433091/1‑94 (MQ=60)
AAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGG < SRR4302544.1791883/94‑1 (MQ=60)
AAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGG < SRR4302544.932807/94‑1 (MQ=60)
AAGAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGG < SRR4302544.2350714/94‑1 (MQ=60)
AAGAACGGTAACTTCAGCAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGG > SRR4302544.3958194/1‑94 (MQ=60)
AGAACGGTAACTTCAGTAGCGTGGGTTTTGGCGGGTTGGGGATTTTGATCGCAACCAGCAAAGACGATCGCGGCAGTCAGCATTGCCCCGCGCG > SRR4302544.819883/1‑94 (MQ=60)
GAACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGT < SRR4302544.594312/94‑1 (MQ=60)
AACGGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTA < SRR4302544.3443487/94‑1 (MQ=60)
GGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCCGTGCCGCGCGGGTAcac > SRR4302544.1669624/1‑91 (MQ=60)
GGTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAG > SRR4302544.2225675/1‑94 (MQ=60)
GTAACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGT > SRR4302544.1628115/1‑94 (MQ=60)
AACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTT > SRR4302544.3540475/1‑94 (MQ=60)
AACTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTT > SRR4302544.2882039/1‑94 (MQ=60)
CTTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTAT < SRR4302544.274380/94‑1 (MQ=60)
TTCAGTAGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATT > SRR4302544.2033737/1‑94 (MQ=60)
TGGCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCAT > SRR4302544.3271721/1‑94 (MQ=60)
GCGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATAC < SRR4302544.4590200/94‑1 (MQ=60)
CGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACG > SRR4302544.4342122/1‑94 (MQ=60)
CGTGGGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACG < SRR4302544.3215646/94‑1 (MQ=60)
CGTGGGGTTTGGTGGGTTGTGGTTTTTGACCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACG < SRR4302544.3215645/94‑1 (MQ=60)
GGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGAT > SRR4302544.60518/1‑94 (MQ=60)
GGTTTTGGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGAT < SRR4302544.2907604/94‑1 (MQ=60)
TTGGTGGGTTGTGGTTTTTGATCGCACCCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTATC < SRR4302544.4445415/94‑1 (MQ=60)
GGTGGGTTGTGTTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTATCCT < SRR4302544.1896937/94‑1 (MQ=60)
GGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTATCCT < SRR4302544.1736764/94‑1 (MQ=60)
GGTGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTATCCT < SRR4302544.1896936/94‑1 (MQ=60)
GCGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTATCCTC < SRR4302544.3784272/94‑1 (MQ=60)
TGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTATCCTCA < SRR4302544.3034386/94‑1 (MQ=60)
TGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTATCCTCA < SRR4302544.2107953/94‑1 (MQ=60)
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CGTTTGGCGTCAATGCCCGGGATGCTGGCACGCCAGAAGGTACCCATAGTTTTGCCTTCAAGAACGGTAACTTCAGTAGCGTGGGTTTTGGCGGGTTGTGGTTTTTGATCGCAACCAACAAAGAAGAGCGCGGCAGCCAGCAGTGCCACGCGGGTAAAGCTTATTTCCATACGTGATTATCCTCA > NC_000913/2309385‑2309569
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
