Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,427,261 |
T→C |
V130A (GTC→GCC) |
b3279 → |
putative transferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,427,261 | 0 | T | C | 98.1%
| 493.0
/ ‑1.4
| 157 | V130A (GTC→GCC) | b3279 | putative transferase |
| Reads supporting (aligned to +/- strand): ref base T (1/2); new base C (61/92); total (62/95) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 |
Only 100 of 167 total aligned reads displayed.
TTGGCAATCGAGTTTTGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGTCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAGAGAAGGCTG > NC_000913/3427171‑3427350
|
ttGGCAATCGAGTTTTGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGccc > 2:355412/1‑93 (MQ=255)
tGGCAATCGAGTTTTGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGcccc < 1:314575/93‑1 (MQ=255)
gCAATCGAGTTTTGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCcac > 1:808046/1‑93 (MQ=255)
gCAATCGAGTTTTGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCcac < 1:2960459/93‑1 (MQ=255)
aTCGAGTTTTGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACaaa > 2:743748/1‑93 (MQ=255)
aTCGAGTTTTGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACaaa > 2:2477124/1‑93 (MQ=255)
gTTTTGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATaaa > 1:645086/1‑93 (MQ=255)
gTTTTGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATaaa < 2:3865446/93‑1 (MQ=255)
gTTTTGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATaaa < 2:2146966/93‑1 (MQ=255)
gTTTTGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATaaa < 1:1566493/93‑1 (MQ=255)
gTTTTGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATaaa > 1:1714343/1‑93 (MQ=255)
ttttGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAAc < 1:203508/93‑1 (MQ=255)
tttGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACg < 2:1022379/93‑1 (MQ=255)
ttggttggGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACgg < 2:3319807/93‑1 (MQ=255)
ggttggGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCt < 2:82461/93‑1 (MQ=255)
gttggGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTg < 2:3100762/93‑1 (MQ=255)
gtggGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGTCCCACAAAATAAACGGCTgg < 1:3536264/92‑1 (MQ=255)
tggGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGga < 2:1461335/93‑1 (MQ=255)
tggGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGga < 2:1515376/93‑1 (MQ=255)
tggGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGga < 2:1770273/93‑1 (MQ=255)
gggATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGgag < 2:3276843/93‑1 (MQ=255)
gggATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGgag < 1:4105214/93‑1 (MQ=255)
gggATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGgag > 2:1828293/1‑93 (MQ=255)
aTGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGagagg > 2:3215144/1‑92 (MQ=255)
aTGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGc < 1:991241/93‑1 (MQ=255)
tGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGTCCCACAAAATAAACGGCTGGAGAGCg < 2:3828448/93‑1 (MQ=255)
tGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCg > 1:1519834/1‑93 (MQ=255)
ggCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGa < 2:1779788/93‑1 (MQ=255)
gCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGat > 1:3067774/1‑93 (MQ=255)
cTCAATTTTACTTTATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGata < 2:2327312/93‑1 (MQ=255)
cTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGata < 1:1047474/93‑1 (MQ=255)
cTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGata > 2:3181727/1‑93 (MQ=255)
tCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGatat > 2:1912208/1‑93 (MQ=255)
cAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATc < 1:2866636/93‑1 (MQ=255)
cAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATc < 1:1284165/93‑1 (MQ=255)
ttttACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGt < 1:4304139/93‑1 (MQ=255)
ttttACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGt > 1:922272/1‑93 (MQ=255)
tttACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTa < 2:1803336/93‑1 (MQ=255)
tttACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTa < 2:765506/93‑1 (MQ=255)
ttACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTAt > 1:2232656/1‑93 (MQ=255)
tACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTAtc < 1:1087276/93‑1 (MQ=255)
tACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTAtc < 1:1737653/93‑1 (MQ=255)
tACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTAtc < 1:1423665/93‑1 (MQ=255)
aCTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTAtct < 2:1847671/93‑1 (MQ=255)
cTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTAtctc < 2:3252685/93‑1 (MQ=255)
attGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTAtctc < 1:3173767/92‑1 (MQ=255)
tGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCgg < 2:301789/93‑1 (MQ=255)
tGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCgg > 1:4221385/1‑93 (MQ=255)
gATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGt > 2:1088842/1‑93 (MQ=255)
aTGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTa < 2:3446526/93‑1 (MQ=255)
tGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAg < 2:305604/93‑1 (MQ=255)
cgcAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGccc < 2:2887532/93‑1 (MQ=255)
cgcAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGccc < 2:3595630/93‑1 (MQ=255)
gcAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGcccc < 2:358729/93‑1 (MQ=255)
gcAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGcccc > 1:3042319/1‑93 (MQ=255)
aaTAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCgc > 1:3321107/1‑92 (MQ=255)
aaTAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGt > 2:1397215/1‑93 (MQ=255)
aaTAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGt < 1:3247519/93‑1 (MQ=255)
aaTAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGt > 1:4396227/1‑93 (MQ=255)
aaTAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCGGGCCCCACAAAATAAACGGCTGGAGATGGGCTATCTGTATCTCGGTAGCCCCGt > 1:4030425/1‑93 (MQ=255)
aTAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTc < 1:3961485/93‑1 (MQ=255)
aTAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTc < 2:4369756/93‑1 (MQ=255)
tagtagAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCa < 2:2599910/93‑1 (MQ=255)
tagtagAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCa > 1:776572/1‑93 (MQ=255)
agtagAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCaa < 2:1405850/93‑1 (MQ=255)
gtagAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCaaa > 2:2514699/1‑93 (MQ=255)
gtagAAGATGATGTGATGATTGGTGCGGATAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGCAGCCCCGTCaaa > 2:2514698/1‑93 (MQ=255)
agaTGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGAt < 2:501737/93‑1 (MQ=255)
atgatgTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATcc > 2:2325346/1‑93 (MQ=255)
aggatgtgaggATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATcc < 2:1834990/91‑1 (MQ=255)
gatgtgatgATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGc > 2:170660/1‑93 (MQ=255)
gatgtgatgATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGc < 1:4047438/93‑1 (MQ=255)
tgtgatgATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGccc > 2:329852/1‑93 (MQ=255)
tgtgatgATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGccc > 2:3223056/1‑93 (MQ=255)
tgtgatgATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGccc > 1:2988576/1‑93 (MQ=255)
atgatTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTa > 1:4630224/1‑93 (MQ=255)
atgatTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTa < 1:2570680/93‑1 (MQ=255)
gatTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAg < 1:595388/93‑1 (MQ=255)
gatTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAg < 1:2634987/93‑1 (MQ=255)
gatTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAg < 1:1267316/93‑1 (MQ=255)
atTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGt < 2:206131/93‑1 (MQ=255)
ttGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGtg > 1:299554/1‑93 (MQ=255)
tGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGtga < 1:4055351/93‑1 (MQ=255)
tGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGtgatga > 1:709620/1‑93 (MQ=255)
gCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGaa < 1:126176/93‑1 (MQ=255)
gCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGaa > 1:4637701/1‑93 (MQ=255)
ggggTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAag < 2:4047120/92‑1 (MQ=255)
gggTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAaga < 1:3639363/93‑1 (MQ=255)
gggTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAaga < 1:800842/93‑1 (MQ=255)
gTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAgaga < 2:4185620/93‑1 (MQ=255)
gTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAgaga > 1:4447533/1‑93 (MQ=255)
tAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAGAGaa > 2:3452758/1‑93 (MQ=255)
tAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAGAGaa < 1:3068841/93‑1 (MQ=255)
tAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAGAGaa < 1:3855348/93‑1 (MQ=255)
tAGTCTGGCCCCACAAAAAAACCGGCTAGAGAGCAGATATCTGTATCTAGGTAGCCCCGTCAAACAGAACCGCCCATTAAGTGATGAAGAGaa < 2:4352850/93‑1 (MQ=255)
aGTCGGGCCCCACAAAATAAACGGCTGGAGACCGGATATCTGTATCGCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAGAGAAg < 1:117117/93‑1 (MQ=255)
gTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAGAGAAgg < 2:2939808/93‑1 (MQ=255)
tGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAGAGAAGGCTg > 2:2062857/1‑93 (MQ=255)
tGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAGAGAAGGCTg < 2:688595/93‑1 (MQ=255)
tGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAGAGAAGGATg > 1:2377793/1‑93 (MQ=255)
|
TTGGCAATCGAGTTTTGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGTCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAGAGAAGGCTG > NC_000913/3427171‑3427350
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCATTGGCAATCGAGTTTTGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGTCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAGAGAAGGCTGGGTT > NC_000913/3427168‑3427354
|
CCATTGGCAATCGAGTTTTGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGC > SRR4302544.745658/1‑94 (MQ=60)
TTGGCAATCGAGTTTTGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCC > SRR4302544.879894/1‑94 (MQ=60)
TGGCAATCGAGTTTTGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCA < SRR4302544.317844/94‑1 (MQ=60)
TGGCAATCGAGTTTTGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCA > SRR4302544.3010381/1‑94 (MQ=60)
GGCAATCGAGTTTTGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCAC > SRR4302544.815928/1‑94 (MQ=60)
GCAATCGAGTTTTGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACA < SRR4302544.2988877/94‑1 (MQ=60)
ATCGAGTTTTGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAA > SRR4302544.1570598/1‑94 (MQ=60)
TCGAGTTTTGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAAT < SRR4302544.129001/94‑1 (MQ=60)
AGTTTTGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAA > SRR4302544.651458/1‑94 (MQ=60)
AGTTTTGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAA > SRR4302544.1731203/1‑94 (MQ=60)
GTTTTGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAAC < SRR4302544.1582021/94‑1 (MQ=60)
TTTTGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACG < SRR4302544.205577/94‑1 (MQ=60)
TTTGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGG < SRR4302544.4094561/94‑1 (MQ=60)
TTTGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGG < SRR4302544.2248537/94‑1 (MQ=60)
TTGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGC < SRR4302544.4599635/94‑1 (MQ=60)
GGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTG < SRR4302544.2033932/94‑1 (MQ=60)
GTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGTCCCACAAAATAAACGGCTGGA < SRR4302544.3570095/94‑1 (MQ=60)
TGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAG > SRR4302544.4277139/1‑94 (MQ=60)
GGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGA < SRR4302544.4146037/94‑1 (MQ=60)
ATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCG > SRR4302544.1534919/1‑94 (MQ=60)
ATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCG < SRR4302544.1001014/94‑1 (MQ=60)
GGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGAT > SRR4302544.3097016/1‑94 (MQ=60)
CTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATAT > SRR4302544.4782955/1‑94 (MQ=60)
CTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATAT < SRR4302544.1057856/94‑1 (MQ=60)
CAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCT < SRR4302544.1296815/94‑1 (MQ=60)
CAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCT < SRR4302544.2894313/94‑1 (MQ=60)
CAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCT < SRR4302544.1140967/94‑1 (MQ=60)
AATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGTCCCACAAAATAAACGGCTGGAGAGCGGATATCTG > SRR4302544.744722/1‑94 (MQ=60)
ATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGT > SRR4302544.931364/1‑94 (MQ=60)
TTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTA < SRR4302544.4348039/94‑1 (MQ=60)
TTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTAT > SRR4302544.2253655/1‑94 (MQ=60)
TACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCT < SRR4302544.1754674/94‑1 (MQ=60)
TACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCT < SRR4302544.1437832/94‑1 (MQ=60)
TACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCT < SRR4302544.1098088/94‑1 (MQ=60)
CTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCG < SRR4302544.1237225/94‑1 (MQ=60)
ATTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCG < SRR4302544.3203970/94‑1 (MQ=60)
TTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGG > SRR4302544.4264195/1‑94 (MQ=60)
TTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGACCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGG < SRR4302544.4486311/94‑1 (MQ=60)
TGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGT < SRR4302544.3970407/94‑1 (MQ=60)
GATGGCGCAATAGTAGAGGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTA < SRR4302544.4258152/94‑1 (MQ=60)
GCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCC < SRR4302544.950723/94‑1 (MQ=60)
CGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCC > SRR4302544.3071425/1‑94 (MQ=60)
CAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGT > SRR4302544.4440679/1‑94 (MQ=60)
CAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGC > SRR4302544.3352744/1‑94 (MQ=60)
CAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGC > SRR4302544.4070573/1‑94 (MQ=60)
CAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCGGGCCCCACAAAATAAACGGCTGGAGATGGGCTATCTGTATCTCGGTAGCCCCGT > SRR4302544.4070572/1‑94 (MQ=60)
AATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTC > SRR4302544.1626451/1‑94 (MQ=60)
AATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTC < SRR4302544.3278604/94‑1 (MQ=60)
ATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCA > SRR4302544.784109/1‑94 (MQ=60)
ATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCA < SRR4302544.4000882/94‑1 (MQ=60)
AGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAA > SRR4302544.3066114/1‑94 (MQ=60)
GAAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGA > SRR4302544.2628802/1‑94 (MQ=60)
AAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGAT > SRR4302544.3081870/1‑94 (MQ=60)
AAGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGAT < SRR4302544.295279/94‑1 (MQ=60)
AGATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATC > SRR4302544.3200313/1‑94 (MQ=60)
GATGATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCC < SRR4302544.2527625/94‑1 (MQ=60)
GATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCC < SRR4302544.4087754/94‑1 (MQ=60)
ATGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCC > SRR4302544.3017241/1‑94 (MQ=60)
TGTGATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCG > SRR4302544.3544296/1‑94 (MQ=60)
GATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTA > SRR4302544.4676123/1‑94 (MQ=60)
ATGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAA < SRR4302544.2595382/94‑1 (MQ=60)
TGATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAG < SRR4302544.1415712/94‑1 (MQ=60)
GATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGT < SRR4302544.601231/94‑1 (MQ=60)
GATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGT < SRR4302544.2660240/94‑1 (MQ=60)
GATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGT < SRR4302544.1279778/94‑1 (MQ=60)
ATTGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTG > SRR4302544.302655/1‑94 (MQ=60)
TGGTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGAT < SRR4302544.4095742/94‑1 (MQ=60)
GTGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGA > SRR4302544.716661/1‑94 (MQ=60)
TGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAA > SRR4302544.4683644/1‑94 (MQ=60)
TGCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAA < SRR4302544.61271/94‑1 (MQ=60)
GCGGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAG < SRR4302544.127338/94‑1 (MQ=60)
GGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAGAG < SRR4302544.808614/94‑1 (MQ=60)
GGGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAGAG < SRR4302544.3675672/94‑1 (MQ=60)
GGTAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAGAGA > SRR4302544.4492344/1‑94 (MQ=60)
TAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAGAGAAG < SRR4302544.3893622/94‑1 (MQ=60)
TAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAGAGAAG < SRR4302544.3098088/94‑1 (MQ=60)
TAGTCTGGCCCAACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAGAGAAG > SRR4302544.3348290/1‑94 (MQ=60)
GAGTCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAGAGAAG < SRR4302544.3893621/94‑1 (MQ=60)
AGTCGGGCCCCACAAAATAAACGGCTGGAGACCGGATATCTGTATCGCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAGAGAAGG < SRR4302544.118181/94‑1 (MQ=60)
TCTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAGAGAAGGCT < SRR4302544.803251/94‑1 (MQ=60)
CTGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAGAGAAGGATG > SRR4302544.2400310/1‑94 (MQ=60)
TGGCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAGAGAAGGCTGG < SRR4302544.3150570/94‑1 (MQ=60)
GCCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAGAGAAGGCTGGGT < SRR4302544.3241397/94‑1 (MQ=60)
CCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAGAGAAGGCTGGGTT < SRR4302544.2377314/94‑1 (MQ=60)
CCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAGAGAAGGCTGGGTT > SRR4302544.676833/1‑94 (MQ=60)
CCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAGAGAAGGCTGGGTT < SRR4302544.2377453/94‑1 (MQ=60)
CCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAGAGAAGGCTGGGTT > SRR4302544.4703818/1‑94 (MQ=60)
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CCATTGGCAATCGAGTTTTGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGTCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAGAGAAGGCTGGGTT > NC_000913/3427168‑3427354
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
