Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,733,584 |
A→G |
E61E (GAA→GAG) |
sodB → |
superoxide dismutase, iron |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,733,584 | 0 | A | G | 100.0%
| 788.3
/ NA
| 237 | E61E (GAA→GAG) | sodB | superoxide dismutase, iron |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (117/120); total (117/120) |
Only 100 of 242 total aligned reads displayed.
CCATCAGACTTATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAAGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAACCGACTG > NC_000913/1733494‑1733672
|
cATCAGACTTATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAgggg > 1:5415076/1‑92 (MQ=255)
aTCAGACTTATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTg < 1:5208664/93‑1 (MQ=255)
aTCAGACTTATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTg > 1:6398621/1‑93 (MQ=255)
aTCAGACTTATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTg > 2:266599/1‑93 (MQ=255)
tCAGACTTATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTgg < 2:5972524/93‑1 (MQ=255)
cAGACTTATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGc < 1:4609615/93‑1 (MQ=255)
cAGACTTATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGc < 2:3716684/93‑1 (MQ=255)
aGACTTATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCg > 2:2566018/1‑93 (MQ=255)
aCTTATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTa > 2:2221537/1‑93 (MQ=255)
ttATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTAtt < 2:6359792/93‑1 (MQ=255)
ttATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTAtt > 1:328242/1‑93 (MQ=255)
aTGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTca > 2:4787618/1‑93 (MQ=255)
aTGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTca > 2:1562027/1‑93 (MQ=255)
tGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTcaa > 1:1919339/1‑93 (MQ=255)
cACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTcaacaa < 2:2367681/93‑1 (MQ=255)
aCTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCaacaac > 1:6286843/1‑93 (MQ=255)
cTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACg < 1:5180140/93‑1 (MQ=255)
cTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACg > 1:3631210/1‑93 (MQ=255)
tAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGc < 1:4999972/93‑1 (MQ=255)
tAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGc < 1:2837938/93‑1 (MQ=255)
aaCCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCa > 2:1003719/1‑93 (MQ=255)
aaCCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCa < 2:3378983/93‑1 (MQ=255)
ccTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGc < 2:413742/93‑1 (MQ=255)
ccTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGc < 2:1662113/93‑1 (MQ=255)
cTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCt > 2:4165968/1‑93 (MQ=255)
cTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCt > 2:1885875/1‑93 (MQ=255)
tGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTc < 1:1780157/93‑1 (MQ=255)
tGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTc > 2:3988681/1‑93 (MQ=255)
gAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCa < 1:3087537/93‑1 (MQ=255)
aacaacCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAg > 2:5027543/1‑93 (MQ=255)
acaacCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAgg > 2:2776310/1‑93 (MQ=255)
acaacCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAgg > 2:1488913/1‑93 (MQ=255)
acaacCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAgg > 1:5320836/1‑93 (MQ=255)
acaacCTGATTAAAGGAACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAgg > 2:319462/1‑93 (MQ=255)
caacCTGATTAAAGTTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGt < 2:3606337/93‑1 (MQ=255)
aacCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTc > 2:3163114/1‑93 (MQ=255)
aacCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTc < 1:436535/93‑1 (MQ=255)
aacCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTc < 1:3676954/93‑1 (MQ=255)
acCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCt > 1:2603658/1‑93 (MQ=255)
aTTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAAc > 1:174949/1‑93 (MQ=255)
aTTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAAc < 1:114869/93‑1 (MQ=255)
aTTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGCGGCGTATTCAACAACGCAGCTCAGGTCTGGAAc > 2:750111/1‑93 (MQ=255)
ttAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAAcc > 2:3002878/1‑93 (MQ=255)
tAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCa < 1:674406/93‑1 (MQ=255)
aaaGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCAt < 2:5816796/93‑1 (MQ=255)
aaaGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCAt > 1:295708/1‑93 (MQ=255)
aaGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATa > 1:6439540/1‑93 (MQ=255)
aaGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATa < 2:1889162/93‑1 (MQ=255)
aGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATAc < 2:3360553/93‑1 (MQ=255)
aGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATAc < 2:4585321/93‑1 (MQ=255)
aGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATAc > 2:3907631/1‑93 (MQ=255)
ggTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACt < 1:2646983/93‑1 (MQ=255)
gTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACtt < 2:2099490/93‑1 (MQ=255)
gTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACtt < 1:1860584/93‑1 (MQ=255)
tACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACttt > 1:4828829/1‑93 (MQ=255)
aCCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTc < 2:348566/93‑1 (MQ=255)
ccGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCt < 1:3132372/93‑1 (MQ=255)
ccGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCt < 1:4082481/93‑1 (MQ=255)
ccGCGTTTGAAGGTAAATCACTGGAAGAGATTATACGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCt > 1:382264/1‑93 (MQ=255)
gcgTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTAc < 1:5742934/93‑1 (MQ=255)
cgTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACt < 2:1583166/93‑1 (MQ=255)
cgTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACt < 2:4346036/93‑1 (MQ=255)
cgTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACt < 2:547832/93‑1 (MQ=255)
tGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGaa < 2:4279564/93‑1 (MQ=255)
tGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGaa < 2:4483187/93‑1 (MQ=255)
tGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGaa < 1:1594155/93‑1 (MQ=255)
gAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTTGAACCATACTTTCTACTGGAAc < 2:1124568/93‑1 (MQ=255)
gAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAAc < 1:662002/93‑1 (MQ=255)
aGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTg > 1:1528645/1‑93 (MQ=255)
aGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTg > 1:1036842/1‑93 (MQ=255)
aGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTg > 1:6653990/1‑93 (MQ=255)
aGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTg > 1:3536449/1‑93 (MQ=255)
ggTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGc > 1:2810337/1‑93 (MQ=255)
ggTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGc > 1:2229386/1‑93 (MQ=255)
gTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGcc < 2:5188363/93‑1 (MQ=255)
gTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGcc < 2:1867410/93‑1 (MQ=255)
gTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGcc > 2:2042654/1‑93 (MQ=255)
aaTCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCCTACTTTCTACTGGAACTGCCTgg > 1:680165/1‑93 (MQ=255)
aaTCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTgg < 1:2187197/93‑1 (MQ=255)
aTCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGc > 1:420954/1‑93 (MQ=255)
aCTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCAcc > 2:2440212/1‑93 (MQ=255)
aaGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACg > 1:6004255/1‑93 (MQ=255)
agagATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGc < 1:6127614/93‑1 (MQ=255)
gaTTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCgg < 2:6541273/93‑1 (MQ=255)
ttattaGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTg > 1:4342471/1‑93 (MQ=255)
ttattCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTg > 2:2627023/1‑93 (MQ=255)
ttattCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTg > 2:5745577/1‑93 (MQ=255)
ttCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCg > 1:152223/1‑93 (MQ=255)
cGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGaa > 2:4092183/1‑93 (MQ=255)
gCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAAc < 2:6465739/93‑1 (MQ=255)
cAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAAcc < 2:5260938/93‑1 (MQ=255)
cAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAAcc < 1:4897103/93‑1 (MQ=255)
cAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAAcc < 2:1946433/93‑1 (MQ=255)
aGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAACCg < 1:3325488/93‑1 (MQ=255)
gCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAACCGa > 1:6195177/1‑93 (MQ=255)
ctctGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAACCGAc < 1:1302118/93‑1 (MQ=255)
tctGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAACCGACt > 1:348610/1‑93 (MQ=255)
tctGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAACCGACt > 1:249705/1‑93 (MQ=255)
tctGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAACCGACt < 1:2286803/93‑1 (MQ=255)
ctGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAACCGACTg < 1:2380552/93‑1 (MQ=255)
|
CCATCAGACTTATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAAGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAACCGACTG > NC_000913/1733494‑1733672
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCACCATCAGACTTATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAAGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAACCGACTGGAAAA > NC_000913/1733491‑1733677
|
GCACCATCAGACTTATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAG < SRR4302536.4450749/94‑1 (MQ=60)
GCACCATCAGACTTATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAG < SRR4302536.2384054/94‑1 (MQ=60)
cccaatatgatttttttcacaaccctaaacaacttattaAAAGGTCCCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGG < SRR4302536.3958711/55‑1 (MQ=60)
CACCATCAGACTTATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGG < SRR4302536.3940214/94‑1 (MQ=60)
ACCATCAGACTTATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGACGG < SRR4302536.5472211/94‑1 (MQ=60)
CCATCAGACTTATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGT < SRR4302536.5619780/94‑1 (MQ=60)
CATCAGACTTATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTG < SRR4302536.6286879/94‑1 (MQ=60)
CATCAGACTTATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTG > SRR4302536.6589578/1‑94 (MQ=60)
ATCAGACTTATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGG < SRR4302536.3671820/94‑1 (MQ=60)
ATCAGACTTATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGG < SRR4302536.5363913/94‑1 (MQ=60)
CAGACTTATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCG < SRR4302536.4748082/94‑1 (MQ=60)
AGACTTATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGT > SRR4302536.5952831/1‑94 (MQ=60)
AGACTTATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGT > SRR4302536.1285537/1‑94 (MQ=60)
AGACTTATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGT > SRR4302536.3767531/1‑94 (MQ=60)
ACTTATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTAT > SRR4302536.3781891/1‑94 (MQ=60)
CTTATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATT > SRR4302536.336959/1‑94 (MQ=60)
TATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCA < SRR4302536.4426128/94‑1 (MQ=60)
ATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAA > SRR4302536.1977087/1‑94 (MQ=60)
TGTCACTAACCTGAACAACCTGATTAAAGGTACAGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAAC < SRR4302536.2924027/94‑1 (MQ=60)
CACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAAC > SRR4302536.264787/1‑94 (MQ=60)
CACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAAC > SRR4302536.6474192/1‑94 (MQ=60)
CACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAAC > SRR4302536.5353021/1‑94 (MQ=60)
ACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACG > SRR4302536.3739826/1‑94 (MQ=60)
ACAAACCAGAACAACCTGAATAAAGGTACCGCGTTGGAAGGTAAATCACTGGAAGAGATGATTCGCAGCTCTGAGGGTGGCGTATTCAACAACG < SRR4302536.2818911/94‑1 (MQ=60)
CTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGC < SRR4302536.5334664/94‑1 (MQ=60)
TAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCA < SRR4302536.2198750/94‑1 (MQ=60)
TAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCA < SRR4302536.2921918/94‑1 (MQ=60)
TAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCA < SRR4302536.5150009/94‑1 (MQ=60)
AACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAG < SRR4302536.6252404/94‑1 (MQ=60)
AACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAG > SRR4302536.6846656/1‑94 (MQ=60)
AACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAG > SRR4302536.5132088/1‑94 (MQ=60)
CCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCT < SRR4302536.2492590/94‑1 (MQ=60)
CTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTC > SRR4302536.6910200/1‑94 (MQ=60)
CTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTC > SRR4302536.2916991/1‑94 (MQ=60)
TGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCA > SRR4302536.5539384/1‑94 (MQ=60)
TGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCA < SRR4302536.1833976/94‑1 (MQ=60)
GAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAG < SRR4302536.2701527/94‑1 (MQ=60)
GAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAG < SRR4302536.3177828/94‑1 (MQ=60)
AACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGG > SRR4302536.5081173/1‑94 (MQ=60)
AACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGG > SRR4302536.5479780/1‑94 (MQ=60)
AACAACCTGATTAAAGGTACCGCATTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGG < SRR4302536.819375/94‑1 (MQ=60)
ACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGT > SRR4302536.1878511/1‑94 (MQ=60)
AACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCT > SRR4302536.4613289/1‑94 (MQ=60)
AACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCT < SRR4302536.448003/94‑1 (MQ=60)
AACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCT < SRR4302536.3786882/94‑1 (MQ=60)
AACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCT > SRR4302536.2681820/1‑94 (MQ=60)
AACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCT < SRR4302536.2300788/94‑1 (MQ=60)
ACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTG > SRR4302536.3055592/1‑94 (MQ=60)
ACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTG > SRR4302536.1864870/1‑94 (MQ=60)
CTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGA > SRR4302536.306783/1‑94 (MQ=60)
CTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGA < SRR4302536.4835192/94‑1 (MQ=60)
TGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAA > SRR4302536.4805792/1‑94 (MQ=60)
TGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAA < SRR4302536.4228872/94‑1 (MQ=60)
TGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAA > SRR4302536.4987222/1‑94 (MQ=60)
GATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAAC > SRR4302536.179528/1‑94 (MQ=60)
ATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACC < SRR4302536.117913/94‑1 (MQ=60)
ATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACC > SRR4302536.6508969/1‑94 (MQ=60)
TTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCA < SRR4302536.3411897/94‑1 (MQ=60)
TAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCAT < SRR4302536.694144/94‑1 (MQ=60)
TAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCAT > SRR4302536.303561/1‑94 (MQ=60)
AAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATA > SRR4302536.6631960/1‑94 (MQ=60)
AAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATAC > SRR4302536.1569537/1‑94 (MQ=60)
GGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTT < SRR4302536.2726283/94‑1 (MQ=60)
GGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTT > SRR4302536.3428453/1‑94 (MQ=60)
GTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTT > SRR4302536.4974145/1‑94 (MQ=60)
GTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTT < SRR4302536.1916627/94‑1 (MQ=60)
TACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTC > SRR4302536.5247844/1‑94 (MQ=60)
ACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATACGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCT > SRR4302536.392339/1‑94 (MQ=60)
CCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTA < SRR4302536.3223973/94‑1 (MQ=60)
CCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTA < SRR4302536.4203509/94‑1 (MQ=60)
GCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATTCTTTCTACT < SRR4302536.4415107/94‑1 (MQ=60)
GCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACT < SRR4302536.63451/94‑1 (MQ=60)
GCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACT < SRR4302536.5913771/94‑1 (MQ=60)
GTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGG > SRR4302536.1563563/1‑94 (MQ=60)
TGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAAC < SRR4302536.1640749/94‑1 (MQ=60)
TGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAAC > SRR4302536.5669544/1‑94 (MQ=60)
TGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAAC > SRR4302536.4491629/1‑94 (MQ=60)
GAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACT < SRR4302536.2357356/94‑1 (MQ=60)
GAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACT < SRR4302536.681412/94‑1 (MQ=60)
GAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACT < SRR4302536.276172/94‑1 (MQ=60)
AAGGTAAATCACTGGAAGAGGTTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTG > SRR4302536.6753087/1‑94 (MQ=60)
AAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTG > SRR4302536.1067615/1‑94 (MQ=60)
AAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTG > SRR4302536.3642149/1‑94 (MQ=60)
AAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTG > SRR4302536.1573620/1‑94 (MQ=60)
AAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTG > SRR4302536.6851768/1‑94 (MQ=60)
AGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGC > SRR4302536.2296815/1‑94 (MQ=60)
AGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGC > SRR4302536.2893644/1‑94 (MQ=60)
GGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCC < SRR4302536.4073219/94‑1 (MQ=60)
GGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCC < SRR4302536.2608686/94‑1 (MQ=60)
GTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGCACCATACTTTCTACTGGAACTGCCT < SRR4302536.6657353/94‑1 (MQ=60)
GTAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCT < SRR4302536.3862390/94‑1 (MQ=60)
TAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTG < SRR4302536.1975672/94‑1 (MQ=60)
TAAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTG < SRR4302536.5452651/94‑1 (MQ=60)
AAATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCCTACTTTCTACTGGAACTGCCTGG > SRR4302536.700099/1‑94 (MQ=60)
AATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGC > SRR4302536.432049/1‑94 (MQ=60)
AATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGC < SRR4302536.2253146/94‑1 (MQ=60)
ATCACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCA > SRR4302536.3213278/1‑94 (MQ=60)
ACTGGAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCG > SRR4302536.3260040/1‑94 (MQ=60)
CTGGAAGANATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGA < SRR4302536.6389101/94‑1 (MQ=60)
GAAGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACG > SRR4302536.6183254/1‑94 (MQ=60)
AGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCC < SRR4302536.6310247/94‑1 (MQ=60)
AGAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCC > SRR4302536.1444790/1‑94 (MQ=60)
GAGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCG > SRR4302536.1651028/1‑94 (MQ=60)
AGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACGACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGG > SRR4302536.2305981/1‑94 (MQ=60)
AGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGG > SRR4302536.1826851/1‑94 (MQ=60)
AGATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGG > SRR4302536.3253292/1‑94 (MQ=60)
GATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGT < SRR4302536.3641199/94‑1 (MQ=60)
GATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGT < SRR4302536.2014550/94‑1 (MQ=60)
GATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCGGGCACCGAACGCCGGT < SRR4302536.3500197/94‑1 (MQ=60)
ATTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTG > SRR4302536.1613169/1‑94 (MQ=60)
ATTATTAGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTG > SRR4302536.4472491/1‑94 (MQ=60)
TTATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGG > SRR4302536.1589404/1‑94 (MQ=60)
ATTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCG > SRR4302536.156164/1‑94 (MQ=60)
ATTCGCAGCTCTGAGGGGGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGACCGCCGGTGGCG > SRR4302536.1141536/1‑94 (MQ=60)
TTCGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACTATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGA < SRR4302536.695386/94‑1 (MQ=60)
CGCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAAC > SRR4302536.6591941/1‑94 (MQ=60)
GCAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAACC < SRR4302536.5477242/94‑1 (MQ=60)
CAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAACCG < SRR4302536.5044387/94‑1 (MQ=60)
CAGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAACCG < SRR4302536.4048501/94‑1 (MQ=60)
AGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAACCGA > SRR4302536.6379702/1‑94 (MQ=60)
AGCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAACCGA < SRR4302536.3423882/94‑1 (MQ=60)
GCTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAACCGAC < SRR4302536.692192/94‑1 (MQ=60)
GCTCTGAGGGAGGCGTATTCAACAACGCAGCTCAGGGCTGGAACCATACCTTCTACTGGAAATGCCTGGCACCGCACGCCGGTGGCGAACTGAC > SRR4302536.2233091/1‑94 (MQ=60)
CTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAACCGACT > SRR4302536.6583191/1‑94 (MQ=60)
CTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAACCGACT > SRR4302536.357855/1‑94 (MQ=60)
CTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAACCGACT > SRR4302536.256374/1‑94 (MQ=60)
CTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAACCGACT < SRR4302536.2279228/94‑1 (MQ=60)
CTCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAACCGACT < SRR4302536.1341025/94‑1 (MQ=60)
TCTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAACCGACTG < SRR4302536.2356153/94‑1 (MQ=60)
CTGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAACCGACTGG < SRR4302536.2452664/94‑1 (MQ=60)
TGAGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAACCGACTGGA > SRR4302536.4780482/1‑94 (MQ=60)
AGGGTGGCGTATTCTACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAACCGACTGGGAA > SRR4302536.1430804/1‑94 (MQ=60)
AGGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAACCGACTGGAAA < SRR4302536.979364/94‑1 (MQ=60)
GGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAACCGACTGGAAAA > SRR4302536.4545954/1‑94 (MQ=60)
GGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAACCGACTGGAAAA < SRR4302536.4835177/94‑1 (MQ=60)
|
GCACCATCAGACTTATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAAGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAACCGACTGGAAAA > NC_000913/1733491‑1733677
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
