Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,855,054 |
T→C |
Q247R (CAG→CGG) |
b1773 ← |
putative aldolase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,855,054 | 0 | T | C | 100.0%
| 701.8
/ NA
| 215 | Q247R (CAG→CGG) | b1773 | putative aldolase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (101/114); total (101/114) |
Only 100 of 215 total aligned reads displayed.
GCTTTGCCATCAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTT > NC_000913/1854964‑1855143
|
tttGCCATCAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATc < 2:5222513/93‑1 (MQ=255)
ttGCCATCAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATcc < 2:5920565/93‑1 (MQ=255)
gCCATCAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTg > 2:261623/1‑93 (MQ=255)
ccATCAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTgg < 1:1825808/93‑1 (MQ=255)
cATCAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGt < 1:1197589/93‑1 (MQ=255)
cATCAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGt > 1:3481591/1‑93 (MQ=255)
aTCAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGtt < 2:4099693/93‑1 (MQ=255)
cAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGtttt < 2:2112749/93‑1 (MQ=255)
cAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGtttt < 1:4696851/93‑1 (MQ=255)
cAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGtttt > 1:4141862/1‑93 (MQ=255)
aGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTtttc > 1:3450418/1‑93 (MQ=255)
gAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTtttct > 2:3893430/1‑93 (MQ=255)
gAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTtttct > 2:703863/1‑93 (MQ=255)
gAACCGAACAGTTTAATTTTTGCAAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTtttct < 2:6172851/93‑1 (MQ=255)
aaCAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACt > 1:5653340/1‑93 (MQ=255)
aaCAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACt > 1:4852489/1‑93 (MQ=255)
aaCAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACt < 2:6047955/93‑1 (MQ=255)
aCAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTg > 2:5430155/1‑93 (MQ=255)
cAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGc < 1:3199529/93‑1 (MQ=255)
cAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGc < 1:6407452/93‑1 (MQ=255)
cAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGc < 1:551482/93‑1 (MQ=255)
aGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCa < 2:5387443/93‑1 (MQ=255)
aGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCa > 1:1053335/1‑93 (MQ=255)
aGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCa < 1:5763999/93‑1 (MQ=255)
gTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCaa < 2:3162772/93‑1 (MQ=255)
tttAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAAc > 2:2243351/1‑93 (MQ=255)
tttAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAAc > 1:1663137/1‑93 (MQ=255)
tAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCa < 1:5121176/93‑1 (MQ=255)
tAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCa < 1:2882459/93‑1 (MQ=255)
aaTTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCAt < 2:5694762/93‑1 (MQ=255)
aTTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCAtt > 2:3141236/1‑93 (MQ=255)
aTTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCAtt < 1:366497/93‑1 (MQ=255)
ttttttCCAATGACCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTg < 2:3305427/93‑1 (MQ=255)
tacAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGcc < 1:1717498/91‑1 (MQ=255)
cAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTg < 1:2170334/93‑1 (MQ=255)
cAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTACTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGACACCATTGCGGCCTg > 2:3914592/1‑93 (MQ=255)
aaTGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGa > 1:2557487/1‑93 (MQ=255)
aaTGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGa > 1:4191375/1‑93 (MQ=255)
aTGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGAc < 1:5964940/93‑1 (MQ=255)
aTGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGAc < 2:2307210/93‑1 (MQ=255)
tGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACa < 1:4578154/93‑1 (MQ=255)
tGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACa < 2:6368032/93‑1 (MQ=255)
tGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACa > 1:1633252/1‑93 (MQ=255)
cccGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACaga < 1:6212015/93‑1 (MQ=255)
cccGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACaga < 2:1014735/93‑1 (MQ=255)
ccGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACagag < 1:2688961/93‑1 (MQ=255)
ccGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACagag > 1:2301329/1‑93 (MQ=255)
ccGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACagag > 1:3101782/1‑93 (MQ=255)
cGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGc > 2:2437981/1‑93 (MQ=255)
ttCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTc < 2:904047/93‑1 (MQ=255)
ttCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTc < 1:6281166/93‑1 (MQ=255)
ttCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTc > 1:705858/1‑93 (MQ=255)
ttCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTc > 1:3801137/1‑93 (MQ=255)
tCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTcc < 1:4543185/93‑1 (MQ=255)
tCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTcc > 2:6021993/1‑93 (MQ=255)
ttttACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGt > 2:4169698/1‑93 (MQ=255)
ttttACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGt > 2:4208155/1‑93 (MQ=255)
tttACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTa < 2:3448021/93‑1 (MQ=255)
tACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATg < 1:817417/93‑1 (MQ=255)
aGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAAt > 2:5863347/1‑93 (MQ=255)
gCTTTACGTACTTCACGTTCTAAATTCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATg > 1:4050902/1‑93 (MQ=255)
gCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATg > 1:2944170/1‑93 (MQ=255)
cTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGt < 1:3261057/93‑1 (MQ=255)
cTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGt < 2:1601178/93‑1 (MQ=255)
tttACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGtt > 2:1912595/1‑93 (MQ=255)
tttACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGtt > 1:391568/1‑93 (MQ=255)
aCGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGAt < 1:5159387/93‑1 (MQ=255)
cGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGAtt > 2:2872038/1‑93 (MQ=255)
gTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGAttt > 1:284055/1‑93 (MQ=255)
gTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGAttt < 2:369191/93‑1 (MQ=255)
gTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGAttt > 2:814840/1‑93 (MQ=255)
gTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATCTTGAttt > 1:2319365/1‑93 (MQ=255)
tACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGAtttt < 2:6536602/93‑1 (MQ=255)
aCTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTc > 2:1856819/1‑93 (MQ=255)
aCTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTc > 2:1966598/1‑93 (MQ=255)
ttCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTcgc > 2:3541898/1‑93 (MQ=255)
ttCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTcgc < 2:6438989/93‑1 (MQ=255)
ttCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTcgc > 2:1460881/1‑93 (MQ=255)
tCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTcgcg < 2:3860720/93‑1 (MQ=255)
tCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTcgcg < 2:1190112/93‑1 (MQ=255)
aCGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGAt > 1:4269791/1‑93 (MQ=255)
tCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATAccc < 1:5466879/93‑1 (MQ=255)
tAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCaa > 2:1680822/1‑93 (MQ=255)
tAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCaa > 2:5156595/1‑93 (MQ=255)
aTGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGa > 2:5004936/1‑93 (MQ=255)
aTGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGa > 2:5102499/1‑93 (MQ=255)
aTGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGa > 2:2955237/1‑93 (MQ=255)
tGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGaa > 2:692723/1‑93 (MQ=255)
gCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGaaa > 1:6556404/1‑93 (MQ=255)
gCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGaaa < 2:6356071/93‑1 (MQ=255)
gCAGGAAAGGCCGATCCTGGTTTTCTTTCACCGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGaaa < 1:3932944/93‑1 (MQ=255)
cAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAAt < 1:2281657/93‑1 (MQ=255)
ggAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTg < 2:3135102/93‑1 (MQ=255)
gAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGc > 1:91997/1‑93 (MQ=255)
gAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGc > 2:3238968/1‑93 (MQ=255)
aaGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAg > 2:2168658/1‑93 (MQ=255)
aaGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAg < 2:4777585/93‑1 (MQ=255)
aaGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAg > 2:4588508/1‑93 (MQ=255)
aGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGt > 2:5556476/1‑93 (MQ=255)
aGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGt > 2:4479204/1‑93 (MQ=255)
|
GCTTTGCCATCAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTT > NC_000913/1854964‑1855143
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCCGCTTTGCCATCAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTA > NC_000913/1854961‑1855146
|
TCCGCTTTGCCATCAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCC < SRR4302536.5898096/94‑1 (MQ=60)
CCGCTTTGCCATCAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCG < SRR4302536.3396444/94‑1 (MQ=60)
CCGCTTTGCCATCAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCG > SRR4302536.1832698/1‑94 (MQ=60)
CGCTTTGCCATCAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGA > SRR4302536.4108242/1‑94 (MQ=60)
CGCTTTGCCATCAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGA > SRR4302536.6063677/1‑94 (MQ=60)
CGCTTTGCCATCAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGA < SRR4302536.4790176/94‑1 (MQ=60)
GCTTTGCCATCAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGAT < SRR4302536.1832034/94‑1 (MQ=60)
GCTTTGCCATCAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGAT < SRR4302536.2328162/94‑1 (MQ=60)
CTTTGCCATCAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATC > SRR4302536.431659/1‑94 (MQ=60)
TTTGCCATCAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCC < SRR4302536.4338254/94‑1 (MQ=60)
TTGCCATCAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCT < SRR4302536.2365797/94‑1 (MQ=60)
GCCATCAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGG < SRR4302536.6581583/94‑1 (MQ=60)
GCCATCAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGG > SRR4302536.4021763/1‑94 (MQ=60)
CCATCAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGT > SRR4302536.3585397/1‑94 (MQ=60)
CCATCAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGT < SRR4302536.1880872/94‑1 (MQ=60)
CATCAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTT < SRR4302536.1233587/94‑1 (MQ=60)
TCAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTT > SRR4302536.4264721/1‑94 (MQ=60)
CAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTC > SRR4302536.6218984/1‑94 (MQ=60)
CAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTC < SRR4302536.4838083/94‑1 (MQ=60)
CAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTC > SRR4302536.3553182/1‑94 (MQ=60)
GAACCGAACAGTTTACTTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTT > SRR4302536.6408046/1‑94 (MQ=60)
AACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTT < SRR4302536.188028/94‑1 (MQ=60)
CCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCA > SRR4302536.2914832/1‑94 (MQ=60)
CGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCAC > SRR4302536.6930005/1‑94 (MQ=60)
GAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACT > SRR4302536.5821349/1‑94 (MQ=60)
GAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACT > SRR4302536.3629745/1‑94 (MQ=60)
GAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACT > SRR4302536.4998505/1‑94 (MQ=60)
CAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACT < SRR4302536.3301260/94‑1 (MQ=60)
CAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCA < SRR4302536.3661765/94‑1 (MQ=60)
CAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCA < SRR4302536.6598796/94‑1 (MQ=60)
CAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCA < SRR4302536.565541/94‑1 (MQ=60)
CAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCA < SRR4302536.3293334/94‑1 (MQ=60)
CAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCA > SRR4302536.1084804/1‑94 (MQ=60)
AGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAA > SRR4302536.4232431/1‑94 (MQ=60)
AGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAA < SRR4302536.5935459/94‑1 (MQ=60)
GTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTGTTTCACTGCAAC < SRR4302536.3416362/94‑1 (MQ=60)
GTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAAC > SRR4302536.1711398/1‑94 (MQ=60)
GTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAAC > SRR4302536.1758426/1‑94 (MQ=60)
TTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCA < SRR4302536.4467262/94‑1 (MQ=60)
TAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCAT < SRR4302536.2967521/94‑1 (MQ=60)
TAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCAT < SRR4302536.5274191/94‑1 (MQ=60)
ATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTG < SRR4302536.376186/94‑1 (MQ=60)
TTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGC < SRR4302536.5641584/94‑1 (MQ=60)
TTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGC < SRR4302536.5026814/94‑1 (MQ=60)
TTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCC > SRR4302536.966263/1‑94 (MQ=60)
TTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCC > SRR4302536.2325751/1‑94 (MQ=60)
TACAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCT < SRR4302536.1767143/94‑1 (MQ=60)
CAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGA < SRR4302536.2235677/94‑1 (MQ=60)
CAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGA > SRR4302536.4315924/1‑94 (MQ=60)
CAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGA > SRR4302536.2634470/1‑94 (MQ=60)
AATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTTTAAATGCAGGAAAGGCCGATCCTGGTGTTCTTTCACTGCAACCATTGCGGCCTGAC > SRR4302536.6449578/1‑94 (MQ=60)
ATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACA < SRR4302536.6142715/94‑1 (MQ=60)
ATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACA > SRR4302536.1680815/1‑94 (MQ=60)
TGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAG < SRR4302536.4715587/94‑1 (MQ=60)
TGCCCGTTCTGTTACAGCTTGACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAG < SRR4302536.292828/94‑1 (MQ=60)
cacgaTCTTTTACAGTTTTACGTACTTCACGTTCTAAATGCAGGAAAGGGCGATCCTGGCGTTCTTTCACTGCAACCATTGCGGCTTGTCAGAG > SRR4302536.5294235/6‑94 (MQ=60)
CCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAG > SRR4302536.6714761/1‑94 (MQ=60)
CCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAG > SRR4302536.2371150/1‑94 (MQ=60)
CCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAG > SRR4302536.2998647/1‑94 (MQ=60)
CCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAG < SRR4302536.6397093/94‑1 (MQ=60)
CCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAG > SRR4302536.3192327/1‑94 (MQ=60)
CCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGC < SRR4302536.2769245/94‑1 (MQ=60)
CCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGC > SRR4302536.819530/1‑94 (MQ=60)
GTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGGCAGAGCTC > SRR4302536.3578279/1‑94 (MQ=60)
GTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTC > SRR4302536.3072665/1‑94 (MQ=60)
GTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTC > SRR4302536.726491/1‑94 (MQ=60)
GTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTC > SRR4302536.3914483/1‑94 (MQ=60)
GTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTC > SRR4302536.4705554/1‑94 (MQ=60)
TTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCC < SRR4302536.6468352/94‑1 (MQ=60)
TCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCG < SRR4302536.4679418/94‑1 (MQ=60)
CTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGT < SRR4302536.4882236/94‑1 (MQ=60)
TTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATG < SRR4302536.4297397/94‑1 (MQ=60)
TACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGA < SRR4302536.841437/94‑1 (MQ=60)
AGCTTTACGTACTTCACGTTCTAAATTCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATG > SRR4302536.4170987/1‑94 (MQ=60)
AGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATG < SRR4302536.2375394/94‑1 (MQ=60)
AGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATG > SRR4302536.3030965/1‑94 (MQ=60)
CTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTT < SRR4302536.5384443/94‑1 (MQ=60)
CTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTT < SRR4302536.3356687/94‑1 (MQ=60)
CTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTT > SRR4302536.401911/1‑94 (MQ=60)
TACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGAT < SRR4302536.297709/94‑1 (MQ=60)
ACGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATT < SRR4302536.5313333/94‑1 (MQ=60)
CGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTT < SRR4302536.914932/94‑1 (MQ=60)
CGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTT > SRR4302536.2613888/1‑94 (MQ=60)
CGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTT > SRR4302536.2634742/1‑94 (MQ=60)
CGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTT < SRR4302536.3907222/94‑1 (MQ=60)
CGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTT > SRR4302536.291614/1‑94 (MQ=60)
CGTACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATCTTGATTT > SRR4302536.2389750/1‑94 (MQ=60)
TACTTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTC > SRR4302536.5298657/1‑94 (MQ=60)
TTCACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCG < SRR4302536.1154321/94‑1 (MQ=60)
CACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGAT > SRR4302536.5417176/1‑94 (MQ=60)
CACGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGAT > SRR4302536.4397059/1‑94 (MQ=60)
CGTTCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATAC > SRR4302536.1443501/1‑94 (MQ=60)
TCTAAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCA < SRR4302536.5630237/94‑1 (MQ=60)
AAATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACG < SRR4302536.5916641/94‑1 (MQ=60)
AATGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGA > SRR4302536.5809424/1‑94 (MQ=60)
TGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAA > SRR4302536.3282852/1‑94 (MQ=60)
TGCAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAA > SRR4302536.6751617/1‑94 (MQ=60)
GCAGGAAAGGCCGATCCTGGTTTTCTTTCACCGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAAT < SRR4302536.4049794/94‑1 (MQ=60)
CAGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATT < SRR4302536.2350834/94‑1 (MQ=60)
AGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTG < SRR4302536.4045355/94‑1 (MQ=60)
AGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTG > SRR4302536.4812136/1‑94 (MQ=60)
AGGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTG < SRR4302536.1705206/94‑1 (MQ=60)
GGAAAGGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGC > SRR4302536.94442/1‑94 (MQ=60)
GGCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTT > SRR4302536.1277301/1‑94 (MQ=60)
GCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTT > SRR4302536.6398855/1‑94 (MQ=60)
GCCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTT < SRR4302536.927804/94‑1 (MQ=60)
CCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTA > SRR4302536.5813711/1‑94 (MQ=60)
CCGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTA > SRR4302536.6157220/1‑94 (MQ=60)
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TCCGCTTTGCCATCAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTA > NC_000913/1854961‑1855146
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
