Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,063,222 |
A→G |
M8T (ATG→ACG) |
cobS ← |
cobalamin 5'‑phosphate synthase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,063,222 | 0 | A | G | 100.0%
| 730.4
/ NA
| 227 | M8T (ATG→ACG) | cobS | cobalamin 5'‑phosphate synthase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (134/93); total (134/93) |
Only 100 of 238 total aligned reads displayed.
GGAAAAGTAATAATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCATCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCAACTGCTGAT > NC_000913/2063132‑2063311
|
ggAAAAGTAATAATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTc < 2:2016938/93‑1 (MQ=255)
gaaaaaGTAATAATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTc < 2:1858460/91‑1 (MQ=255)
gAAAAGTAATAATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCg > 2:35157/1‑93 (MQ=255)
aaaGTAATAATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGcc > 2:4435878/1‑93 (MQ=255)
aaGTAATAATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGccc < 1:919357/93‑1 (MQ=255)
aaGTAATAATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGccc > 2:4950098/1‑93 (MQ=255)
aaGTAATAATACCGCGAGAATAATGCTCGAAATACAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGAGTCGccc > 2:3201228/1‑93 (MQ=255)
aGTAATAATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCa > 1:3721463/1‑93 (MQ=255)
aGTAATAATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACCCGGTACAGGCAGACGCGCAATAAATGAGAGCGGCGCCCa > 1:6146051/1‑93 (MQ=255)
gTAATAATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCaa > 1:5917356/1‑93 (MQ=255)
taataaTACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCaaa > 2:2228327/1‑93 (MQ=255)
taataaTACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCaaa > 2:1278522/1‑93 (MQ=255)
aataatACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCaaaa < 2:3939707/93‑1 (MQ=255)
aataatACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCaaaa < 2:3659625/93‑1 (MQ=255)
aataatACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCaaaa < 2:1348372/93‑1 (MQ=255)
aataCCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAaataa < 2:4013272/93‑1 (MQ=255)
ataCCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAaataat < 1:6685256/93‑1 (MQ=255)
ataCCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAaataat > 1:5485632/1‑93 (MQ=255)
ataCCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAaataat > 1:5673183/1‑93 (MQ=255)
taCCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAAtt > 1:3072982/1‑93 (MQ=255)
aCCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAAttt < 2:3699772/93‑1 (MQ=255)
aCCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAAttt > 1:3984255/1‑93 (MQ=255)
cgcgAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTAc > 1:779405/1‑93 (MQ=255)
gcgAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACt < 1:5094804/93‑1 (MQ=255)
gcgAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACt > 1:4329437/1‑93 (MQ=255)
gcgAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACt > 2:672893/1‑93 (MQ=255)
cgAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTc > 2:3277602/1‑93 (MQ=255)
gagaATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCa < 1:1797156/93‑1 (MQ=255)
gagaATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCa < 2:1488228/93‑1 (MQ=255)
gagaATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCa > 1:318578/1‑93 (MQ=255)
agaATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCAt < 1:906589/93‑1 (MQ=255)
agaATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCAt < 1:2825328/93‑1 (MQ=255)
gaATAATGCTCGAAATCCAGTCCCTGGGAGCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGGCGCCCAAAATAATTTACTCAtt > 1:2259895/1‑93 (MQ=255)
gaATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCAtt < 1:3357119/93‑1 (MQ=255)
aataatGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCAttt > 1:1915466/1‑93 (MQ=255)
ataatGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTg > 2:4778781/1‑93 (MQ=255)
ataatGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTg < 1:2896683/93‑1 (MQ=255)
taatGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGa < 2:2617725/93‑1 (MQ=255)
aatGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGAt < 2:2751094/93‑1 (MQ=255)
aatGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGAt < 2:257712/93‑1 (MQ=255)
atGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGAtt < 1:991801/93‑1 (MQ=255)
atGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGAtt > 1:1979464/1‑93 (MQ=255)
atGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGAtt > 1:4820054/1‑93 (MQ=255)
atGCTAGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGAtt > 1:4939034/1‑93 (MQ=255)
tGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTGGCCCAAAAAAATTTACTCATTTGAttt > 2:1678472/1‑93 (MQ=255)
cTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGAttttt < 2:4198145/93‑1 (MQ=255)
cTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGAttttt < 1:5698865/93‑1 (MQ=255)
tCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTa < 2:763954/93‑1 (MQ=255)
tCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTa > 1:5437072/1‑93 (MQ=255)
cGAAATCCAGTCCCTGGGACCAGCGACGCGGCACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTAc > 2:5368420/1‑93 (MQ=255)
aaaTCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTc > 1:1022956/1‑93 (MQ=255)
aaTCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTcc < 1:4147640/93‑1 (MQ=255)
aTCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAACATAATTTACTCATTTGATTTTTACTCCa > 2:2346942/1‑93 (MQ=255)
aTCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCa > 1:4975356/1‑93 (MQ=255)
aTCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCa > 1:1217350/1‑93 (MQ=255)
cAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTTCTCCAATa < 1:6567353/93‑1 (MQ=255)
aGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATAc > 1:2446192/1‑93 (MQ=255)
gTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATAcc < 1:6633728/93‑1 (MQ=255)
gTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATAcc > 1:2014503/1‑93 (MQ=255)
cccTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCg > 1:2057615/1‑93 (MQ=255)
ccTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGa > 1:6260583/1‑93 (MQ=255)
ccTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGa > 2:3844901/1‑93 (MQ=255)
cTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGaa > 1:3506152/1‑93 (MQ=255)
tGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGaaa > 2:1957712/1‑93 (MQ=255)
gggACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAac > 1:4241511/1‑93 (MQ=255)
gACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAacca > 1:5160163/1‑93 (MQ=255)
ccAGCAACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTTCTCCAATACCCGAAacctcc < 1:4121510/93‑1 (MQ=255)
aGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAg > 2:4396216/1‑93 (MQ=255)
aGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAg > 1:3956708/1‑93 (MQ=255)
aGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAg < 2:505068/93‑1 (MQ=255)
gACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCa > 2:5010770/1‑93 (MQ=255)
aCGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCAt > 1:843732/1‑93 (MQ=255)
cgcgGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATa > 2:5845996/1‑93 (MQ=255)
cgGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACt < 1:214642/93‑1 (MQ=255)
cAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCAtt < 2:6120967/93‑1 (MQ=255)
cAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCAtt < 2:5622527/93‑1 (MQ=255)
aGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCg < 2:1125692/93‑1 (MQ=255)
aGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCg > 1:390554/1‑93 (MQ=255)
aCGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCa < 1:1109649/93‑1 (MQ=255)
gcgTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCCCCAGCCATCCTTCATTTGCCGCAGc < 2:2928549/93‑1 (MQ=255)
gcgTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGc > 2:2111668/1‑93 (MQ=255)
cgTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCg < 1:1559834/93‑1 (MQ=255)
cgTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCg < 2:4670964/93‑1 (MQ=255)
cgTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCg > 1:2515369/1‑93 (MQ=255)
taataaATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGc > 1:3193960/1‑93 (MQ=255)
taataaATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGc > 1:3395122/1‑93 (MQ=255)
aaTGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCAAct < 2:4571321/93‑1 (MQ=255)
aaTGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCAAct > 2:1372287/1‑93 (MQ=255)
tGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCAActgc < 1:4431835/93‑1 (MQ=255)
tGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCAActgc < 2:4142474/93‑1 (MQ=255)
gagCGTCGCCCAAAATCATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCAACTGCTGa > 1:5320908/1‑93 (MQ=255)
gagCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCAACTGCTGa > 2:5366265/1‑93 (MQ=255)
gagCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCAACTGCTGa < 1:3639700/93‑1 (MQ=255)
gagCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCAACTGCTGa > 2:591860/1‑93 (MQ=255)
gagCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCAACTGCTGa > 2:2967244/1‑93 (MQ=255)
gagCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCAACTGCTGa > 1:1671468/1‑93 (MQ=255)
gagCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCAACTGCTGa < 2:4449490/93‑1 (MQ=255)
agCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATCCCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCAACTGCTGAt < 2:6550052/93‑1 (MQ=255)
agCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCa > 2:6503934/1‑68 (MQ=255)
agCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCAACTGCTGAt < 2:1430419/93‑1 (MQ=255)
|
GGAAAAGTAATAATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCATCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCAACTGCTGAT > NC_000913/2063132‑2063311
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAAGGAAAAGTAATAATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCATCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCAACTGCTGATTTA > NC_000913/2063129‑2063314
|
AAAGGAAAAGTAATAATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCG < SRR4302536.2082820/94‑1 (MQ=60)
AAGGAAAAGTAATAATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGT < SRR4302536.2337783/94‑1 (MQ=60)
AGGAAAAGTAATAATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTC < SRR4302536.4306047/94‑1 (MQ=60)
AGGAAAAGTAATAATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTC < SRR4302536.6562463/94‑1 (MQ=60)
GGAAAAGTAATAATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCG > SRR4302536.2052211/1‑94 (MQ=60)
GAAAAGTAATAATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGC < SRR4302536.1192910/94‑1 (MQ=60)
AAAGTAATAATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCC > SRR4302536.4245920/1‑94 (MQ=60)
AAGTAATAATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCA > SRR4302536.3832702/1‑94 (MQ=60)
AAGTAATAATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCA < SRR4302536.946446/94‑1 (MQ=60)
AAGTAATAATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCA < SRR4302536.946448/94‑1 (MQ=60)
AAGTAATAATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACCCGGTACAGGCAGACGCGCAATAAATGAGAGCGGCGCCCA > SRR4302536.6329162/1‑94 (MQ=60)
ATTAATAATACAGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAA < SRR4302536.2330546/94‑1 (MQ=60)
AGTAATAATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAA > SRR4302536.6093616/1‑94 (MQ=60)
AGTAATAATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGACAGCGTCGCCCAA > SRR4302536.722306/1‑94 (MQ=60)
TAATAATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAA > SRR4302536.928559/1‑94 (MQ=60)
AATAATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAAT > SRR4302536.5311148/1‑94 (MQ=60)
AATAATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAAT > SRR4302536.5619718/1‑94 (MQ=60)
AATAAGACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAAT < SRR4302536.3057663/94‑1 (MQ=60)
ATAATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATA > SRR4302536.4091044/1‑94 (MQ=60)
TAATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAA > SRR4302536.3856056/1‑94 (MQ=60)
AATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAAT > SRR4302536.5841829/1‑94 (MQ=60)
AATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAAT > SRR4302536.5649386/1‑94 (MQ=60)
AATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAAT < SRR4302536.903469/94‑1 (MQ=60)
AATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAAT > SRR4302536.1549985/1‑94 (MQ=60)
ATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATT < SRR4302536.6883812/94‑1 (MQ=60)
ATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATT < SRR4302536.5123692/94‑1 (MQ=60)
ATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATT > SRR4302536.5771226/1‑94 (MQ=60)
ATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATT > SRR4302536.3162995/1‑94 (MQ=60)
TACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTT > SRR4302536.4102532/1‑94 (MQ=60)
CCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTAC > SRR4302536.802243/1‑94 (MQ=60)
CGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACT > SRR4302536.4459109/1‑94 (MQ=60)
GCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTC < SRR4302536.5247158/94‑1 (MQ=60)
CGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCA > SRR4302536.5444153/1‑94 (MQ=60)
CGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCA > SRR4302536.327017/1‑94 (MQ=60)
GAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCAT < SRR4302536.1851406/94‑1 (MQ=60)
AGAATAATGCTCGAAATCCAGTCCCTGGGAGCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGGCGCCCAAAATAATTTACTCATT > SRR4302536.2328327/1‑94 (MQ=60)
AGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATT > SRR4302536.1749072/1‑94 (MQ=60)
AGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATT < SRR4302536.933298/94‑1 (MQ=60)
AGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATT < SRR4302536.2908967/94‑1 (MQ=60)
AGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGGACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATT > SRR4302536.4049315/1‑94 (MQ=60)
GAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTT < SRR4302536.3456762/94‑1 (MQ=60)
GAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTT > SRR4302536.1973073/1‑94 (MQ=60)
ATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGA < SRR4302536.2982128/94‑1 (MQ=60)
ATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGA < SRR4302536.313438/94‑1 (MQ=60)
AATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATT > SRR4302536.2038992/1‑94 (MQ=60)
AATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATT > SRR4302536.5140510/1‑94 (MQ=60)
AATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATT > SRR4302536.4965113/1‑94 (MQ=60)
AATGCTAGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATT > SRR4302536.5087456/1‑94 (MQ=60)
ATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTT < SRR4302536.1021049/94‑1 (MQ=60)
TGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTT < SRR4302536.260783/94‑1 (MQ=60)
TGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTT < SRR4302536.4978072/94‑1 (MQ=60)
GCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTT > SRR4302536.3584323/1‑94 (MQ=60)
CTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTA > SRR4302536.5599662/1‑94 (MQ=60)
CTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTA < SRR4302536.5868319/94‑1 (MQ=60)
TCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAGTGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTAC < SRR4302536.2260443/94‑1 (MQ=60)
TCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTAC > SRR4302536.1470641/1‑94 (MQ=60)
CGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACT < SRR4302536.4292798/94‑1 (MQ=60)
GAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTC > SRR4302536.1053250/1‑94 (MQ=60)
AAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCC < SRR4302536.4563997/94‑1 (MQ=60)
AATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCA > SRR4302536.6134817/1‑94 (MQ=60)
AATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCA > SRR4302536.1253922/1‑94 (MQ=60)
AATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCA > SRR4302536.5124786/1‑94 (MQ=60)
AATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCA > SRR4302536.1906066/1‑94 (MQ=60)
AATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCA < SRR4302536.4270713/94‑1 (MQ=60)
ATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAA > SRR4302536.6846539/1‑94 (MQ=60)
CCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGATCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATA < SRR4302536.343042/94‑1 (MQ=60)
CAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTTCTCCAATAC < SRR4302536.6762812/94‑1 (MQ=60)
CAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATAC > SRR4302536.2520108/1‑94 (MQ=60)
CAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATAC > SRR4302536.851331/1‑94 (MQ=60)
AGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACC > SRR4302536.3956516/1‑94 (MQ=60)
AGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACC < SRR4302536.6236863/94‑1 (MQ=60)
AGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACC > SRR4302536.2075123/1‑94 (MQ=60)
GTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCC < SRR4302536.5506626/94‑1 (MQ=60)
GTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCC < SRR4302536.6831034/94‑1 (MQ=60)
TCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCG > SRR4302536.3282702/1‑94 (MQ=60)
TCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCG > SRR4302536.6024336/1‑94 (MQ=60)
TCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCG > SRR4302536.2119582/1‑94 (MQ=60)
CCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATCCCCGA < SRR4302536.643076/94‑1 (MQ=60)
CCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGA > SRR4302536.6447104/1‑94 (MQ=60)
CCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGA > SRR4302536.3720585/1‑94 (MQ=60)
CCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAA > SRR4302536.3610791/1‑94 (MQ=60)
TGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAAC > SRR4302536.4367799/1‑94 (MQ=60)
TGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAAC > SRR4302536.2318140/1‑94 (MQ=60)
GGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACC < SRR4302536.2608608/94‑1 (MQ=60)
GGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCA > SRR4302536.2009455/1‑94 (MQ=60)
GGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCA > SRR4302536.5314130/1‑94 (MQ=60)
CCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCA > SRR4302536.2544167/1‑94 (MQ=60)
CCAGCAACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTTCTCCAATACCCGAAACCTCCA < SRR4302536.4243714/94‑1 (MQ=60)
CAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAG > SRR4302536.4074211/1‑94 (MQ=60)
AGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGC > SRR4302536.2184883/1‑94 (MQ=60)
AGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGC > SRR4302536.2966911/1‑94 (MQ=60)
GCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCC < SRR4302536.4130048/94‑1 (MQ=60)
GACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCAT > SRR4302536.868529/1‑94 (MQ=60)
CACGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTGCTCATTTGATTTTTACTCCAATGCCCGAAACCTCCAGCCAT < SRR4302536.1089443/94‑1 (MQ=60)
CGCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATAC < SRR4302536.4199636/94‑1 (MQ=60)
GTGGTACAGGCAGACTCGTAATAAATGCGAGCGTCGCCCAAGAGAATTTACGCATTTGATTTTTACTCCAATACCCGAAACCGCCAGCCATACT < SRR4302536.847793/94‑1 (MQ=60)
GCGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACT < SRR4302536.3250254/94‑1 (MQ=60)
CGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTT < SRR4302536.220332/94‑1 (MQ=60)
CGGTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTT > SRR4302536.5654845/1‑94 (MQ=60)
GTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCTGAAACCACCAGCCATACTTCA > SRR4302536.346038/1‑94 (MQ=60)
GTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCA > SRR4302536.3708395/1‑94 (MQ=60)
GTACAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCA > SRR4302536.6675849/1‑94 (MQ=60)
CAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTT > SRR4302536.6779214/1‑94 (MQ=60)
CAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTT > SRR4302536.2116338/1‑94 (MQ=60)
CAGGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTT > SRR4302536.5235503/1‑94 (MQ=60)
GGCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGC > SRR4302536.3418343/1‑94 (MQ=60)
GCAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCC < SRR4302536.971500/94‑1 (MQ=60)
CAGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCG > SRR4302536.400865/1‑94 (MQ=60)
AGACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGC > SRR4302536.537510/1‑94 (MQ=60)
GACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCA < SRR4302536.4851885/94‑1 (MQ=60)
ACGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAG < SRR4302536.1142944/94‑1 (MQ=60)
CGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGC < SRR4302536.6892724/94‑1 (MQ=60)
CGCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGC > SRR4302536.4409642/1‑94 (MQ=60)
GCGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCG > SRR4302536.2591215/1‑94 (MQ=60)
CGTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGG < SRR4302536.1605657/94‑1 (MQ=60)
GTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGC > SRR4302536.3496099/1‑94 (MQ=60)
GTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGC > SRR4302536.3287594/1‑94 (MQ=60)
GTAATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGC > SRR4302536.4754656/1‑94 (MQ=60)
ATAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCAA > SRR4302536.3755939/1‑94 (MQ=60)
TAAATGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCAAC > SRR4302536.5868083/1‑94 (MQ=60)
TGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCAACTGCT < SRR4302536.4564717/94‑1 (MQ=60)
TGAGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCAACTGCT < SRR4302536.232039/94‑1 (MQ=60)
AGAGCGTCGCCCAAAATCATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCAACTGCTGA > SRR4302536.5479853/1‑94 (MQ=60)
AGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCAACTGCTGA > SRR4302536.2071318/1‑94 (MQ=60)
AGAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCAACTGCTGA > SRR4302536.1719948/1‑94 (MQ=60)
GAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCCACTGCTGAT > SRR4302536.1618671/1‑94 (MQ=60)
GAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCAACTGCTGAT < SRR4302536.3748535/94‑1 (MQ=60)
GAGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCAACTGCTGAT < SRR4302536.1970461/94‑1 (MQ=60)
AGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCAACTGCTGATT > SRR4302536.601790/1‑94 (MQ=60)
AGCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCAACTGCTGATT > SRR4302536.5118334/1‑94 (MQ=60)
GCGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCAACTGCTGATTT < SRR4302536.1859670/94‑1 (MQ=60)
CGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCGCCAGCCATACTTCATTTGCCGCAGCGGCCAACTGCTGATTTA < SRR4302536.4043830/94‑1 (MQ=60)
CGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCAACTGCTGATTTA > SRR4302536.6552401/1‑94 (MQ=60)
CGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCAACTGCTGATTTA > SRR4302536.6497121/1‑94 (MQ=60)
CGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCAACTGCTGATTTA > SRR4302536.6337243/1‑94 (MQ=60)
CGTCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCAACTGCTGATTTA > SRR4302536.5464860/1‑94 (MQ=60)
|
AAAGGAAAAGTAATAATACCGCGAGAATAATGCTCGAAATCCAGTCCCTGGGACCAGCGACGCGGTACAGGCAGACGCGTAATAAATGAGAGCATCGCCCAAAATAATTTACTCATTTGATTTTTACTCCAATACCCGAAACCACCAGCCATACTTCATTTGCCGCAGCGGCCAACTGCTGATTTA > NC_000913/2063129‑2063314
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
