Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I2 R1 1475 266.7 13469680 98.2% 13227225 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,478,503 (A)7→6 intergenic (+12/+47) yjgN → / ← valS hypothetical protein/valine tRNA synthetase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,478,4970A.99.6% 1280.0 / ‑3.1 276intergenic (+6/+53)yjgN/valShypothetical protein/valine tRNA synthetase
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base . (166/109);  total (166/110)
Fisher's exact test for biased strand distribution p-value = 3.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 309 total aligned reads displayed.

CCTTTAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAAGGCCGGATGCATGCTCCGGCCTTGCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTT  >  NC_000913/4478405‑4478587
                                                                                            |                                                                                          
ccttTAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATa                                                                                            <  1:3466716/93‑1 (MQ=255)
ccttTAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATa                                                                                            <  2:6179544/93‑1 (MQ=255)
 cttTAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATaa                                                                                           >  1:6259629/1‑93 (MQ=255)
  tttAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATaaa                                                                                          >  1:4520558/1‑93 (MQ=255)
  tttAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATaaa                                                                                          >  1:2951520/1‑93 (MQ=255)
  tttAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATaaa                                                                                          <  1:6351290/93‑1 (MQ=255)
   ttAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATaaaa                                                                                         <  1:2179200/93‑1 (MQ=255)
     aaTCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATaaaaaa                                                                                       <  2:1759087/93‑1 (MQ=255)
       tCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATaaaaaagg                                                                                     <  2:3625785/93‑3 (MQ=255)
        cAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATaaaaaaggc                                                                                    <  2:5790228/93‑4 (MQ=255)
          aTAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCg                                                                                 >  2:3156896/1‑93 (MQ=255)
          aTAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCg                                                                                 >  1:6012203/1‑93 (MQ=255)
          aTAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCg                                                                                 <  1:2917732/93‑1 (MQ=255)
           tAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCgg                                                                                >  2:6592407/1‑93 (MQ=255)
           tAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCgg                                                                                <  2:4667793/93‑1 (MQ=255)
             aagaagAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGag                                                                              >  1:2859954/1‑92 (MQ=255)
             aagaagAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGag                                                                              >  1:5680281/1‑92 (MQ=255)
              agaagaACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGagc                                                                             <  2:519518/93‑3 (MQ=255)
              agaagaACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGagc                                                                             >  1:5544811/1‑91 (MQ=255)
              agaagaACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGagc                                                                             >  2:147313/1‑91 (MQ=255)
               gaagaaCAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGagca                                                                            >  1:5790288/1‑90 (MQ=255)
               gaagaaCAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGagca                                                                            <  1:3872148/93‑4 (MQ=255)
                aagaaCAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGagcat                                                                           >  2:1525722/1‑89 (MQ=255)
                     caacCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTct                                                                     <  2:372284/93‑2 (MQ=255)
                        ccAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGc                                                                  >  1:6140981/1‑93 (MQ=255)
                           gATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCtt                                                               <  1:432034/93‑1 (MQ=255)
                            aTAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCttc                                                              >  2:1950994/1‑92 (MQ=255)
                             tAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCttcg                                                             <  2:3426785/93‑3 (MQ=255)
                             tAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCttcg                                                             >  1:3118458/1‑91 (MQ=255)
                              aaaGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCttcgt                                                            >  2:6682700/1‑90 (MQ=255)
                              aaaCGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCCTTACCATTTCTGTAAGAGATAAAAAAGGCGGGAGCATGCTCTGGCCttcgt                                                            <  1:908171/93‑4 (MQ=255)
                               aaGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCttcgtt                                                           >  2:2769275/1‑89 (MQ=255)
                                aGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGttt                                                         <  1:1620963/93‑1 (MQ=255)
                                aGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGttt                                                         <  2:1332139/93‑1 (MQ=255)
                                aGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGttt                                                         <  1:4135522/93‑1 (MQ=255)
                                aGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGttt                                                         <  2:2353203/93‑1 (MQ=255)
                                aGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGttt                                                         <  2:5944612/93‑1 (MQ=255)
                                 ggCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGtttt                                                        >  2:3530504/1‑93 (MQ=255)
                                 ggCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGtttt                                                        >  1:2391870/1‑93 (MQ=255)
                                 ggCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGtttt                                                        >  1:4250759/1‑93 (MQ=255)
                                 ggCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGtttt                                                        >  1:2774825/1‑93 (MQ=255)
                                 ggCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGtttt                                                        >  2:243042/1‑93 (MQ=255)
                                  gCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGtttta                                                       >  1:3349895/1‑92 (MQ=255)
                                    ttcttAGACAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGTCGGAGCATGCTCTGGCCTTCGTTTtcat                                                     >  1:4204764/1‑93 (MQ=255)
                                     tcttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTtcatc                                                    <  1:1036076/93‑1 (MQ=255)
                                     tcttAGCCAGTATTTCACGGGGAGTTATGCATTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTtcatc                                                    <  1:2100361/93‑1 (MQ=255)
                                     tcttAGACAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTtcatc                                                    >  1:1502100/1‑93 (MQ=255)
                                      cttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCAATTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTtcatca                                                   >  1:5436117/1‑93 (MQ=255)
                                      cttAGCCAGTATTTCACGGCGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTtcatca                                                   <  1:2289376/93‑1 (MQ=255)
                                       ttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCAc                                                  >  2:3017562/1‑93 (MQ=255)
                                          gCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACtgt                                               <  1:3301207/93‑1 (MQ=255)
                                            cAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTgtgt                                             <  1:5861922/93‑1 (MQ=255)
                                            cAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTgtgt                                             <  2:4333406/93‑1 (MQ=255)
                                              gTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGttt                                           >  2:3071518/1‑93 (MQ=255)
                                               tATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGtttt                                          >  2:5874019/1‑93 (MQ=255)
                                               tATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGtttt                                          >  1:5909407/1‑93 (MQ=255)
                                                aTTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTg                                         >  2:3845466/1‑93 (MQ=255)
                                                   tCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGAtt                                      <  2:3495922/93‑1 (MQ=255)
                                                   tCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGAtt                                      <  1:1175338/93‑1 (MQ=255)
                                                   tCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGAtt                                      <  1:4406790/93‑1 (MQ=255)
                                                       ggggAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAg                                  >  2:3461802/1‑93 (MQ=255)
                                                        gggAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAgc                                 <  2:5587046/93‑1 (MQ=255)
                                                             ttATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCgcggc                            >  2:4124992/1‑93 (MQ=255)
                                                               aTGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCTTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGa                          <  1:3380659/93‑1 (MQ=255)
                                                                tGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGAt                         >  2:4557870/1‑93 (MQ=255)
                                                                 gCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATa                        >  1:6697421/1‑93 (MQ=255)
                                                                   cttcttTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAAc                      >  2:6102927/1‑93 (MQ=255)
                                                                   cttcttTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAAc                      >  2:1085273/1‑93 (MQ=255)
                                                                   cttcttTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAAc                      >  2:2243493/1‑93 (MQ=255)
                                                                   cttcttTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAAc                      >  2:2555870/1‑93 (MQ=255)
                                                                      cttTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGc                   <  1:5000507/93‑1 (MQ=255)
                                                                       tttACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGcc                  >  2:722129/1‑93 (MQ=255)
                                                                        ttACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCct                 <  2:1645746/93‑1 (MQ=255)
                                                                        ttACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCct                 <  2:4922502/93‑1 (MQ=255)
                                                                         tACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCctg                >  2:3579016/1‑93 (MQ=255)
                                                                         tACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCctg                >  1:5025794/1‑93 (MQ=255)
                                                                          aCCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCctgc               >  1:203943/1‑93 (MQ=255)
                                                                          aCCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCctgc               >  2:5969790/1‑93 (MQ=255)
                                                                           ccATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCctgct              >  1:4758776/1‑93 (MQ=255)
                                                                           ccATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCctgct              >  2:4513868/1‑93 (MQ=255)
                                                                             aTTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGt            <  2:3922841/93‑1 (MQ=255)
                                                                              tttCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGtt           >  1:5416540/1‑93 (MQ=255)
                                                                              tttCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGtt           >  1:1796753/1‑93 (MQ=255)
                                                                              tttCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGtt           >  2:1717050/1‑93 (MQ=255)
                                                                              tttCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGtt           <  1:65745/93‑1 (MQ=255)
                                                                               ttCTGTAAGAGATAAAAAAGGCCGGAGCATTCTTGGTCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGCCGATAACAGCCTGCTGTTc          <  1:2667203/93‑1 (MQ=255)
                                                                               ttCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTc          >  2:5428363/1‑93 (MQ=255)
                                                                                 cTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCaa        >  2:4370876/1‑93 (MQ=255)
                                                                                  tGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAAt       <  2:4852822/93‑1 (MQ=255)
                                                                                   gTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATc      >  1:2565911/1‑93 (MQ=255)
                                                                                   gTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATc      >  2:405038/1‑93 (MQ=255)
                                                                                    tAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCa     >  1:5251813/1‑93 (MQ=255)
                                                                                     aaGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAg    <  1:1243049/93‑1 (MQ=255)
                                                                                     aaGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAg    >  1:3742701/1‑93 (MQ=255)
                                                                                      agagATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGt   <  2:1017086/93‑1 (MQ=255)
                                                                                      agagATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGGTCAATCAGt   >  2:5059791/1‑93 (MQ=255)
                                                                                      agagATAAAAAAGGCCGGAACATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGt   <  2:1855211/93‑1 (MQ=255)
                                                                                       gagaTAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtt  >  1:1970562/1‑93 (MQ=255)
                                                                                       gagaTAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtt  >  2:4890608/1‑93 (MQ=255)
                                                                                       gagaTAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtt  >  2:4235901/1‑93 (MQ=255)
                                                                                            |                                                                                          
CCTTTAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAAGGCCGGATGCATGCTCCGGCCTTGCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTT  >  NC_000913/4478405‑4478587

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAAGGCCGGATGCATGCTCCGGCCTTGCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCT  >  NC_000913/4478411‑4478598
                                                                                             |                                                                                               
ATCAATAAAGAAGACCAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGG                                                                                                <  SRR4302536.6080280/94‑1 (MQ=60)
 TCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGC                                                                                              >  SRR4302536.943756/1‑94 (MQ=60)
  CAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCC                                                                                             >  SRR4302536.5992614/1‑94 (MQ=60)
  CAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCC                                                                                             <  SRR4302536.3314139/94‑1 (MQ=60)
   AATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCG                                                                                            >  SRR4302536.6191437/1‑94 (MQ=60)
    ATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGG                                                                                           >  SRR4302536.5273422/1‑94 (MQ=60)
    ATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGG                                                                                           <  SRR4302536.3003854/94‑1 (MQ=60)
     TAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAAATAAAAAAGGCCGGA                                                                                          >  SRR4302536.5612835/1‑94 (MQ=60)
      AAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAG                                                                                         >  SRR4302536.2944483/1‑94 (MQ=60)
      AAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAG                                                                                         >  SRR4302536.5849163/1‑94 (MQ=60)
      AAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAG                                                                                         >  SRR4302536.4538530/1‑94 (MQ=60)
        AGAAGAACAACCAGATAAAGGCTTCTTAGTCAGTATTTCACGGGGAGCTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCA                                                                                      >  SRR4302536.5658971/1‑94 (MQ=60)
        AGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCA                                                                                      >  SRR4302536.2385236/1‑94 (MQ=60)
        AGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCA                                                                                      >  SRR4302536.5962651/1‑94 (MQ=60)
        AGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCA                                                                                      <  SRR4302536.1546676/94‑1 (MQ=60)
        AGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCA                                                                                      >  SRR4302536.4394112/1‑94 (MQ=60)
         GAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCAT                                                                                     <  SRR4302536.3987316/94‑1 (MQ=60)
          AAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATG                                                                                    >  SRR4302536.2426655/1‑94 (MQ=60)
          AAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATG                                                                                    >  SRR4302536.2183130/1‑94 (MQ=60)
          AAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATG                                                                                    >  SRR4302536.2880004/1‑94 (MQ=60)
          AAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATG                                                                                    >  SRR4302536.4503226/1‑94 (MQ=60)
           AGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGC                                                                                   >  SRR4302536.3079033/1‑94 (MQ=60)
            GAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCT                                                                                  <  SRR4302536.3799492/94‑1 (MQ=60)
              ACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCT                                                                                >  SRR4302536.2484391/1‑94 (MQ=60)
              ACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCT                                                                                <  SRR4302536.6423057/94‑1 (MQ=60)
                 ACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGC                                                                             >  SRR4302536.2092089/1‑94 (MQ=60)
                 ACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGC                                                                             >  SRR4302536.6323982/1‑94 (MQ=60)
                   CAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCT                                                                           <  SRR4302536.3855408/94‑1 (MQ=60)
                   CAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCT                                                                           >  SRR4302536.993080/1‑94 (MQ=60)
                   CAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCT                                                                           >  SRR4302536.3399860/1‑94 (MQ=60)
                   CAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCT                                                                           <  SRR4302536.4166113/94‑1 (MQ=60)
                   CAGATAAAGGCTTCTTAGCCAGAATTTCACGGGGAGCTACGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTCGCCT                                                                           >  SRR4302536.6308713/1‑94 (MQ=60)
                    AGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTT                                                                          >  SRR4302536.2578561/1‑94 (MQ=60)
                     GATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTC                                                                         >  SRR4302536.671456/1‑94 (MQ=60)
                     GATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTC                                                                         <  SRR4302536.5584058/94‑1 (MQ=60)
                     GATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTC                                                                         <  SRR4302536.443399/94‑1 (MQ=60)
                      ATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCtggacttcg                                                                        >  SRR4302536.6842405/1‑85 (MQ=60)
                      ATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTcg                                                                        >  SRR4302536.643127/1‑92 (MQ=60)
                      ATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTcg                                                                        >  SRR4302536.3209552/1‑92 (MQ=60)
                       TAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGT                                                                      >  SRR4302536.1267905/1‑94 (MQ=60)
                        AAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTT                                                                     <  SRR4302536.2667828/94‑1 (MQ=60)
                        AAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTT                                                                     >  SRR4302536.4445879/1‑94 (MQ=60)
                         AAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTT                                                                    <  SRR4302536.4562857/94‑1 (MQ=60)
                         AAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTT                                                                    >  SRR4302536.58237/1‑94 (MQ=60)
                         AAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTT                                                                    >  SRR4302536.5406703/1‑94 (MQ=60)
                          AGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTT                                                                   >  SRR4302536.396719/1‑94 (MQ=60)
                          AGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTT                                                                   >  SRR4302536.4377393/1‑94 (MQ=60)
                          AGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTT                                                                   >  SRR4302536.4065172/1‑94 (MQ=60)
                          AGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTT                                                                   <  SRR4302536.4258132/94‑1 (MQ=60)
                          AGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTT                                                                   >  SRR4302536.2464284/1‑94 (MQ=60)
                          AGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTT                                                                   <  SRR4302536.125710/94‑1 (MQ=60)
                          AGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTT                                                                   >  SRR4302536.2857280/1‑94 (MQ=60)
                          AGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTT                                                                   <  SRR4302536.1668181/94‑1 (MQ=60)
                          AGGCTTCTGAGCCAGTATTTCACAGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCAGGCTCTGGCCTTCGTTTT                                                                   <  SRR4302536.2815359/94‑1 (MQ=60)
                           GGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTcgtttta                                                                   >  SRR4302536.3449240/1‑87 (MQ=60)
                           GGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTC                                                                  >  SRR4302536.1084363/1‑94 (MQ=60)
                             CTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCAT                                                                >  SRR4302536.1571403/1‑94 (MQ=60)
                             CTTCTTAGACAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGTCGGAGCATGCTCTGGCCTTCGTTTTCAT                                                                >  SRR4302536.4329752/1‑94 (MQ=60)
                              TTCTTAGACAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATC                                                               >  SRR4302536.1546400/1‑94 (MQ=60)
                               TCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCA                                                              <  SRR4302536.5874059/94‑1 (MQ=60)
                               TCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCA                                                              <  SRR4302536.1066819/94‑1 (MQ=60)
                               TCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCAATTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCA                                                              >  SRR4302536.5598674/1‑94 (MQ=60)
                               TCTTAGCCAGTATTTCACGGGGAGTTATGCATTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCA                                                              <  SRR4302536.2163525/94‑1 (MQ=60)
                                CTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCAC                                                             >  SRR4302536.3031566/1‑94 (MQ=60)
                                CTTAGCCAGTATTTCACGGCGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCAC                                                             <  SRR4302536.2358815/94‑1 (MQ=60)
                                  TAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTG                                                           >  SRR4302536.4886892/1‑94 (MQ=60)
                                   AGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGT                                                          >  SRR4302536.6460138/1‑94 (MQ=60)
                                    GCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTG                                                         <  SRR4302536.1844058/94‑1 (MQ=60)
                                    GCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTG                                                         <  SRR4302536.3398569/94‑1 (MQ=60)
                                     CCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGT                                                        >  SRR4302536.6526361/1‑94 (MQ=60)
                                      CAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTT                                                       <  SRR4302536.2866719/94‑1 (MQ=60)
                                      CAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTT                                                       <  SRR4302536.1960861/94‑1 (MQ=60)
                                      CAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTT                                                       <  SRR4302536.6036557/94‑1 (MQ=60)
                                       AGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTT                                                      >  SRR4302536.1117240/1‑94 (MQ=60)
                                        GTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTT                                                     >  SRR4302536.6085429/1‑94 (MQ=60)
                                         TATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTG                                                    <  SRR4302536.6319782/94‑1 (MQ=60)
                                         TATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTG                                                    <  SRR4302536.488101/94‑1 (MQ=60)
                                          CTTTCACGAGTAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAATAA‑‑CCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGA                                                   >  SRR4302536.3482390/1‑94 (MQ=49)
                                          ATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGCAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGA                                                   >  SRR4302536.2950316/1‑94 (MQ=60)
                                            TTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATT                                                 <  SRR4302536.3324632/94‑1 (MQ=60)
                                             TCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTA                                                <  SRR4302536.3035620/94‑1 (MQ=60)
                                             TCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTA                                                <  SRR4302536.2091812/94‑1 (MQ=60)
                                             TCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTA                                                <  SRR4302536.4538598/94‑1 (MQ=60)
                                             TCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTA                                                <  SRR4302536.4373835/94‑1 (MQ=60)
                                             TCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTA                                                >  SRR4302536.709024/1‑94 (MQ=60)
                                             TCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTA                                                <  SRR4302536.1210719/94‑1 (MQ=60)
                                                CGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAG                                             <  SRR4302536.3555497/94‑1 (MQ=60)
                                                CGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAG                                             >  SRR4302536.5149445/1‑94 (MQ=60)
                                                CGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAG                                             <  SRR4302536.369839/94‑1 (MQ=60)
                                                 GGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGC                                            >  SRR4302536.3472910/1‑94 (MQ=60)
                                                  GGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCG                                           <  SRR4302536.3538173/94‑1 (MQ=60)
                                                     AGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGG                                        >  SRR4302536.4318745/1‑94 (MQ=60)
                                                      GTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGC                                       <  SRR4302536.5715096/94‑1 (MQ=60)
                                                      GTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGC                                       >  SRR4302536.1923683/1‑94 (MQ=60)
                                                         TTGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGAT                                    >  SRR4302536.3409305/1‑94 (MQ=60)
                                                         ATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGAT                                    <  SRR4302536.5890193/94‑1 (MQ=60)
                                                         ATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCTTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGAT                                    <  SRR4302536.3481125/94‑1 (MQ=60)
                                                          TGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGGCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATA                                   >  SRR4302536.2159751/1‑94 (MQ=60)
                                                          TGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATA                                   >  SRR4302536.6896350/1‑94 (MQ=60)
                                                           GCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAA                                  >  SRR4302536.653245/1‑94 (MQ=60)
                                                            CCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAAC                                 >  SRR4302536.4551638/1‑94 (MQ=60)
                                                            CCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAAC                                 <  SRR4302536.4368070/94‑1 (MQ=60)
                                                             CTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACA                                >  SRR4302536.5349478/1‑94 (MQ=60)
                                                              TTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAG                               <  SRR4302536.6101011/94‑1 (MQ=60)
                                                              TTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAG                               <  SRR4302536.1301733/94‑1 (MQ=60)
                                                              TTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAC                               >  SRR4302536.3192003/1‑94 (MQ=60)
                                                                CTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCC                             <  SRR4302536.5150555/94‑1 (MQ=60)
                                                                 TTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCT                            <  SRR4302536.5564485/94‑1 (MQ=60)
                                                                  TTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTG                           <  SRR4302536.225995/94‑1 (MQ=60)
                                                                  TTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTG                           >  SRR4302536.5176455/1‑94 (MQ=60)
                                                                   TACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGC                          >  SRR4302536.1523938/1‑94 (MQ=60)
                                                                   TACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGC                          >  SRR4302536.209308/1‑94 (MQ=60)
                                                                   TACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGC                          <  SRR4302536.2975323/94‑1 (MQ=60)
                                                                    ACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCT                         >  SRR4302536.4902072/1‑94 (MQ=60)
                                                                    ACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCT                         <  SRR4302536.3633524/94‑1 (MQ=60)
                                                                       ATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTT                      >  SRR4302536.5578426/1‑94 (MQ=60)
                                                                       ATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTT                      >  SRR4302536.6822801/1‑94 (MQ=60)
                                                                       ATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTT                      >  SRR4302536.1850996/1‑94 (MQ=60)
                                                                        TTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTC                     <  SRR4302536.67536/94‑1 (MQ=60)
                                                                         TTCTGTAAGAGATAAAAAAGGCCGGAGCATTCTTGGTCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGCCGATAACAGCCTGCTGTTCA                    <  SRR4302536.2746983/94‑1 (MQ=49)
                                                                            TGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATC                 <  SRR4302536.5988638/94‑1 (MQ=60)
                                                                            TGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATC                 >  SRR4302536.2643106/1‑94 (MQ=60)
                                                                            TGTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATC                 >  SRR4302536.1763483/1‑94 (MQ=60)
                                                                             GTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCA                >  SRR4302536.5408300/1‑94 (MQ=60)
                                                                             GTAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCA                <  SRR4302536.844869/94‑1 (MQ=60)
                                                                              TAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAG               >  SRR4302536.219042/1‑94 (MQ=60)
                                                                              TAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAG               >  SRR4302536.3854590/1‑94 (MQ=60)
                                                                              TAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAG               <  SRR4302536.3472230/94‑1 (MQ=60)
                                                                              TAAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAG               <  SRR4302536.5148676/94‑1 (MQ=60)
                                                                               AAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGT              >  SRR4302536.6669184/1‑94 (MQ=60)
                                                                               AAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGT              <  SRR4302536.1280376/94‑1 (MQ=60)
                                                                               AAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGT              >  SRR4302536.6046447/1‑94 (MQ=60)
                                                                               AAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGT              <  SRR4302536.4271607/94‑1 (MQ=60)
                                                                               AAGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGT              >  SRR4302536.2677987/1‑94 (MQ=60)
                                                                                AGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTT             >  SRR4302536.2029810/1‑94 (MQ=60)
                                                                                AGAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGACGATAACAGCCTGCTGTTCAATCAGGT             >  SRR4302536.2334707/1‑94 (MQ=60)
                                                                                 GAGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTT            <  SRR4302536.5474056/94‑1 (MQ=60)
                                                                                  AGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTC           >  SRR4302536.5302799/1‑94 (MQ=60)
                                                                                  AGATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTC           <  SRR4302536.1352013/94‑1 (MQ=60)
                                                                                   GATAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCG          <  SRR4302536.177833/94‑1 (MQ=60)
                                                                                     atAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGC         >  SRR4302536.2379304/3‑94 (MQ=60)
                                                                                     atAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGC         >  SRR4302536.3694251/3‑94 (MQ=60)
                                                                                      TAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCT        <  SRR4302536.1532939/94‑1 (MQ=60)
                                                                                      TAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCT        >  SRR4302536.4871985/1‑94 (MQ=60)
                                                                                      TAAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCT        <  SRR4302536.1441731/94‑1 (MQ=60)
                                                                                       AAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTT       <  SRR4302536.3412680/94‑1 (MQ=60)
                                                                                       AAAAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTT       >  SRR4302536.5788109/1‑94 (MQ=60)
                                                                                         AAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTC     <  SRR4302536.2367125/94‑1 (MQ=60)
                                                                                         AAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTC     <  SRR4302536.1464173/94‑1 (MQ=60)
                                                                                         AAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTC     >  SRR4302536.418343/1‑94 (MQ=60)
                                                                                         AAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTC     >  SRR4302536.5163670/1‑94 (MQ=60)
                                                                                         AAAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTC     >  SRR4302536.966095/1‑94 (MQ=60)
                                                                                          AAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCG    <  SRR4302536.6209857/94‑1 (MQ=60)
                                                                                          AAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCG    <  SRR4302536.4075733/94‑1 (MQ=60)
                                                                                          AAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCG    >  SRR4302536.5223224/1‑94 (MQ=60)
                                                                                          AAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCG    >  SRR4302536.4892415/1‑94 (MQ=60)
                                                                                          AAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCG    <  SRR4302536.2494145/94‑1 (MQ=60)
                                                                                          AAAGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCG    <  SRR4302536.4424258/94‑1 (MQ=60)
                                                                                             AGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCT  <  SRR4302536.1231487/94‑1 (MQ=60)
                                                                                             AGGCCGGAGCATGCTCTGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATAAGTTTCGCTTTCGCT  >  SRR4302536.2121768/1‑94 (MQ=60)
                                                                                             |                                                                                               
ATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAAGGCCGGATGCATGCTCCGGCCTTGCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCT  >  NC_000913/4478411‑4478598

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: