Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑T‑‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTG > NC_000913/2460816‑2461002
|
AGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑TGAT‑A‑C‑T‑‑CCCCCCCCC > SRR4302536.1247805/1‑94 (MQ=60)
ACAAACCGGAAGCGAAAAGAATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAC‑A‑C‑C‑‑CCCCCCCCCct < SRR4302536.4945383/94‑3 (MQ=60)
AAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GG > SRR4302536.4199111/1‑94 (MQ=60)
ACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑T‑‑CCCCCCCCCcttgcc > SRR4302536.427913/1‑88 (MQ=60)
CCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTA > SRR4302536.4944815/1‑94 (MQ=60)
CCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑T‑‑CCCCCCCCCccggcca > SRR4302536.1539793/1‑87 (MQ=60)
CTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTAT < SRR4302536.5263506/94‑1 (MQ=60)
GAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑T‑‑CCCCCCCCCT‑GGCTATTGT < SRR4302536.6442383/94‑1 (MQ=60)
GAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑T‑‑CCCCCCCCCT‑GGCTATTGT > SRR4302536.5565294/1‑94 (MQ=60)
GAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑T‑‑CCCCCCCCCT‑GGCTATAGT < SRR4302536.5362088/94‑1 (MQ=60)
AAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑T‑‑CCCCCCCCCctgcccatttt > SRR4302536.4699964/1‑83 (MQ=60)
AGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTG < SRR4302536.35034/94‑1 (MQ=60)
AGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTG > SRR4302536.3372184/1‑94 (MQ=60)
AGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTG < SRR4302536.1628518/94‑1 (MQ=60)
AGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑T‑‑CCCCCCCCCT‑GGCTATTGTGC > SRR4302536.1114948/1‑94 (MQ=60)
aggaaatgtgTATTTTCAGGCGTTCTGCTCTTCCTTCTCAAATAGTTTACTTTTCTCCATTTCCA‑GGTT‑T‑CTT‑‑CCCCCCCCCT‑GGCTATTGTGC < SRR4302536.1686633/84‑1 (MQ=60)
GGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTTCG > SRR4302536.4991168/1‑94 (MQ=60)
AAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCT‑GGAT‑A‑C‑T‑‑CCCCCCCCCcttgccctttgtgccc > SRR4302536.4695059/1‑78 (MQ=60)
AAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCT < SRR4302536.1882440/94‑1 (MQ=60)
AAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTC < SRR4302536.3454768/94‑1 (MQ=60)
GCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATA < SRR4302536.2212430/94‑1 (MQ=60)
GCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATA > SRR4302536.5363737/1‑94 (MQ=60)
CATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑G‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATAC < SRR4302536.5864303/94‑1 (MQ=60)
CATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATAC < SRR4302536.1626123/94‑1 (MQ=60)
CATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCCCATAC > SRR4302536.3784413/1‑94 (MQ=60)
ATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACA < SRR4302536.4323612/94‑1 (MQ=60)
ATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCACACA > SRR4302536.703137/1‑94 (MQ=60)
ATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑T‑‑CCCCCCCCCccggctttttgtcgctctccaa > SRR4302536.1859598/1‑72 (MQ=60)
TTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑C‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTC < SRR4302536.797759/94‑1 (MQ=60)
TCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑T‑‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAAT < SRR4302536.2727536/94‑1 (MQ=60)
CAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAAT < SRR4302536.5359370/94‑1 (MQ=60)
CAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAAT < SRR4302536.1415310/94‑1 (MQ=60)
AGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATT < SRR4302536.3985634/94‑1 (MQ=60)
AGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATT > SRR4302536.5616374/1‑94 (MQ=60)
GGCGTTCTGCGCGTCCTTCCCAAAGAGTTTACTTGTTGGCATTTCCAGGGATCC‑C‑C‑‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATT < SRR4302536.3805287/94‑1 (MQ=40)
taggccttcctcctttacttcccaaatggtttactttttcgcctttccaggattcccCCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAAT < SRR4302536.3338154/37‑1 (MQ=60)
GTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTttgtgctcctacaaccaaattaaaa > SRR4302536.1285134/1‑69 (MQ=60)
GTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAG > SRR4302536.5572097/1‑94 (MQ=60)
TCTGCTTGTTCTTCTCAAAGGGTTTACTTTTCTGCATTTCCA‑GGATCC‑C‑C‑‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGAT < SRR4302536.904145/94‑1 (MQ=60)
TCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑C‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGAT < SRR4302536.1233406/94‑1 (MQ=60)
TCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑T‑‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATA < SRR4302536.932334/94‑1 (MQ=60)
tttctgctcattcttcttaaatagtttctttttcttctttttcgggttcctT‑‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAG < SRR4302536.1220572/43‑1 (MQ=60)
TGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAG < SRR4302536.179889/94‑1 (MQ=60)
TGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAG > SRR4302536.5624093/1‑94 (MQ=60)
GCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGG < SRR4302536.5899167/94‑1 (MQ=60)
GCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGG < SRR4302536.1293473/94‑1 (MQ=60)
CGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑T‑‑CCCCCCCCCT‑GGCccttttggccctcaaaaataaaaattaaaaaaaggtct > SRR4302536.2922175/1‑56 (MQ=60)
CCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑T‑‑CCCCCCCCCTCGGCTATTGTGCGCTCTTACACTCAAATTAAAGACAGGTTCCAA > SRR4302536.4508297/1‑94 (MQ=60)
CCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑T‑‑CCCCCCCCCT‑GGCTATTTTGCGCTCATACACTCCAATTAAAAATAGGTTCTAAA > SRR4302536.3561191/1‑94 (MQ=60)
CTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑T‑‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAAT > SRR4302536.2809493/1‑94 (MQ=60)
CTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAA > SRR4302536.6882401/1‑94 (MQ=60)
CTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAAATAGGTTGTAAATAA > SRR4302536.1002281/1‑94 (MQ=60)
CTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑T‑‑CCCCCCCCCccggctttatgctctccttcacttaaaattaaaataagatgttaaataa > SRR4302536.6283545/1‑45 (MQ=60)
TCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑TCCCCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAA < SRR4302536.6334505/94‑1 (MQ=60)
CAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑T‑‑CCCCCCCCCctgtgcttttcgcggtcatgcacccaatctatagttatcttctaaataaat > SRR4302536.2690433/1‑43 (MQ=60)
CAAAGAGTTTAATTTTCTGCATTTCCA‑GGAT‑A‑C‑TA‑CCCCCACCTT‑GGCTATTGACCGCTCACAGAGTCAAATTAAAGATAGGTTCTAAATAAAT > SRR4302536.3411667/1‑94 (MQ=46)
AATAGTTTACTTTTCTGCATTTCCA‑GGAT‑ACC‑C‑‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGA < SRR4302536.2779470/94‑1 (MQ=60)
AAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGA < SRR4302536.456153/94‑1 (MQ=60)
AGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑T‑‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGC > SRR4302536.989707/1‑94 (MQ=60)
GAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGC < SRR4302536.1258559/94‑1 (MQ=60)
AAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGC < SRR4302536.324146/94‑1 (MQ=60)
TTTTCTTTTCCTCATTTCCA‑GGAT‑T‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTT < SRR4302536.1950585/94‑1 (MQ=60)
TTACTTTTCTTCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTT < SRR4302536.112266/94‑1 (MQ=60)
TTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTT < SRR4302536.6052254/94‑1 (MQ=60)
TACTTTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTT > SRR4302536.2056803/1‑94 (MQ=60)
TCTTTTTTGCATTTCCA‑GGATCC‑C‑C‑‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTT < SRR4302536.5535629/94‑1 (MQ=60)
TCTTTTCTGCATTTCCA‑GGATCC‑C‑C‑‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTT < SRR4302536.6505176/94‑1 (MQ=60)
CTTTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTT < SRR4302536.2544954/94‑1 (MQ=60)
attcacttttatccattcccagattcccCCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTT < SRR4302536.952874/66‑1 (MQ=60)
TTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGA < SRR4302536.4587769/94‑1 (MQ=60)
TTTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGA < SRR4302536.4168292/94‑1 (MQ=60)
TTTCTGCATTTCCA‑GGAT‑A‑C‑T‑‑CCCCCCCCCcgggcgtttttgcgcacctacacccacatttacaaaaggttctaaataaattagggatttttgt > SRR4302536.3711530/1‑30 (MQ=60)
tccttttcggcattttcaggctacccCCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTT < SRR4302536.5883326/68‑1 (MQ=60)
TTCTGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACGCTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGAT < SRR4302536.6675418/94‑1 (MQ=60)
CTGCATTTCCA‑GGAT‑T‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAG < SRR4302536.3016964/94‑1 (MQ=60)
CTGCATTTACA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAT > SRR4302536.6553131/1‑94 (MQ=60)
TGCATTTCCA‑GGAT‑ACC‑C‑‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGT < SRR4302536.5462563/94‑1 (MQ=60)
TGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTCTTGTGCGCCCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGT > SRR4302536.5703234/1‑94 (MQ=60)
TGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGT < SRR4302536.5761787/94‑1 (MQ=60)
TGCATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCC‑GGCTATTTTGCGCTCATACCCTCAAATTAAAGATAGGTTCTAAAATAATGGGCGTTTTTTGATAGT > SRR4302536.5244668/1‑94 (MQ=60)
CATTTCCA‑GGAT‑ACC‑C‑‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCT < SRR4302536.4702428/94‑1 (MQ=60)
CATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCA < SRR4302536.3869355/94‑1 (MQ=60)
CATTTCCA‑GGAT‑A‑C‑T‑‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTA < SRR4302536.1317416/94‑1 (MQ=60)
ATTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTA < SRR4302536.6786550/94‑1 (MQ=60)
TTTCCA‑GGATCC‑C‑C‑‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTAT < SRR4302536.4689660/94‑1 (MQ=60)
TTTCCA‑GGAT‑ACC‑C‑‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTAT < SRR4302536.5065471/94‑1 (MQ=60)
TTTCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTAT < SRR4302536.1569418/94‑1 (MQ=60)
TCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTT < SRR4302536.6871407/94‑1 (MQ=60)
TCCA‑GGAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTT < SRR4302536.4127947/94‑1 (MQ=60)
attctcaggcaaatcCCCCCGCCCT‑GGCTATTGTGCGCTCGTACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTA < SRR4302536.3433438/79‑1 (MQ=60)
CA‑GGAT‑A‑C‑T‑‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCAT < SRR4302536.2089052/94‑1 (MQ=60)
ttccaggcatccccCCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTAT < SRR4302536.4147850/80‑1 (MQ=60)
GAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTA < SRR4302536.2350295/94‑1 (MQ=60)
GAT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTA < SRR4302536.2864264/94‑1 (MQ=60)
AT‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGGGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATAAGGGTTTTTTGATAGTTTATTTCATTAG > SRR4302536.2719545/1‑94 (MQ=60)
AT‑A‑C‑T‑‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGG < SRR4302536.2189850/94‑1 (MQ=60)
T‑A‑C‑TC‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGG < SRR4302536.2231537/94‑1 (MQ=60)
ctcCCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTA < SRR4302536.3158222/91‑1 (MQ=60)
T‑‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAAT < SRR4302536.1641263/94‑1 (MQ=60)
C‑‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAAT < SRR4302536.6146153/94‑1 (MQ=60)
tcCCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAA < SRR4302536.6070685/92‑1 (MQ=60)
CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATA < SRR4302536.4711664/94‑1 (MQ=60)
CCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATAT < SRR4302536.1885681/94‑1 (MQ=60)
CCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATAT < SRR4302536.4821348/94‑1 (MQ=60)
CCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATAT < SRR4302536.713053/94‑1 (MQ=60)
CCCCCCCCT‑GACTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATAT < SRR4302536.2992711/94‑1 (MQ=60)
CCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATA < SRR4302536.4774286/94‑1 (MQ=60)
CCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATA > SRR4302536.6186381/1‑94 (MQ=60)
CCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATA > SRR4302536.5023605/1‑94 (MQ=60)
CCCCCCT‑GGCTATTGTGCGCTCATACACTCAATGTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATAT < SRR4302536.6810003/94‑1 (MQ=60)
CCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATAT < SRR4302536.6215535/94‑1 (MQ=60)
CCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATA > SRR4302536.498930/1‑94 (MQ=60)
CCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATA > SRR4302536.3566431/1‑94 (MQ=60)
CCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATAT > SRR4302536.3734552/1‑94 (MQ=60)
CCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATT < SRR4302536.125585/94‑1 (MQ=60)
CCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTT < SRR4302536.4205248/94‑1 (MQ=60)
CT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTG > SRR4302536.4225081/1‑94 (MQ=60)
CT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTG > SRR4302536.2954452/1‑94 (MQ=60)
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AGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑C‑T‑‑CCCCCCCCCT‑GGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTG > NC_000913/2460816‑2461002
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
