Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,077,905	A→G	S584P (TCG→CCG)	tktA ←	transketolase 1 isozyme

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,077,905	0	A	G	99.4%	1108.2 / ‑5.0	341	S584P (TCG→CCG)	tktA	transketolase 1 isozyme
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (149/190); minor base T (1/1); total (150/191)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 355 total aligned reads displayed.

CCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGACATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGA  >  NC_000913/3077815‑3077994

ccGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCa                                                                                         <  1:8704579/93‑1 (MQ=255)

ccGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCa                                                                                         <  2:2330911/93‑1 (MQ=255)

ccGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCa                                                                                         <  1:3493127/93‑1 (MQ=255)

ccGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCa                                                                                         <  1:3078783/93‑1 (MQ=255)

 cGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCAt                                                                                        <  1:7356481/93‑1 (MQ=255)

 cGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCAt                                                                                        <  1:3961107/93‑1 (MQ=255)

 cGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCAt                                                                                        <  2:7115956/93‑1 (MQ=255)

 cGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCAt                                                                                        <  1:6349597/93‑1 (MQ=255)

  gCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATg                                                                                       <  2:5168854/93‑1 (MQ=255)

   cTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATgg                                                                                      <  2:5573631/93‑1 (MQ=255)

     tCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGac                                                                                    >  2:155947/1‑93 (MQ=255)

      cTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGaca                                                                                   <  1:6505457/93‑1 (MQ=255)

      cTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGaca                                                                                   <  1:2051522/93‑1 (MQ=255)

       tACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGacac                                                                                  >  2:3014373/1‑93 (MQ=255)

        aCAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGAcacc                                                                                 >  2:6697759/1‑93 (MQ=255)

         cAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGAcacca                                                                                <  2:4173766/93‑1 (MQ=255)

          cgCAACGCCTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGAtaccac                                                                               <  1:1625374/92‑1 (MQ=255)

          aGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGAcaccac                                                                               <  1:1541738/93‑1 (MQ=255)

           gCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCAcg                                                                              >  2:6949343/1‑93 (MQ=255)

            cAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCAcgc                                                                             <  2:3810558/93‑1 (MQ=255)

             aaCGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCAcgcg                                                                            <  1:9664249/93‑1 (MQ=255)

             aaCGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCAcgcg                                                                            >  2:9443558/1‑93 (MQ=255)

              aCGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCAcgcgc                                                                           <  1:2433088/93‑1 (MQ=255)

              aCGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCAcgcgc                                                                           >  2:4759852/1‑93 (MQ=255)

               cgcgTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCAcgcgcg                                                                          <  2:6614591/93‑1 (MQ=255)

                  gTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCtt                                                                       >  2:7328942/1‑93 (MQ=255)

                   tGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCttt                                                                      >  2:6573462/1‑93 (MQ=255)

                   tGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCttt                                                                      >  2:82707/1‑93 (MQ=255)

                    gCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACAGCACGCGCGCTTTc                                                                     >  1:9948919/1‑93 (MQ=255)

                    gCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTc                                                                     >  1:2949072/1‑93 (MQ=255)

                     cAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCa                                                                    <  2:8703848/93‑1 (MQ=255)

                      aGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCAc                                                                   <  1:5173574/93‑1 (MQ=255)

                        tAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGc                                                                 >  2:1817285/1‑93 (MQ=255)

                        tAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGc                                                                 >  1:4103730/1‑93 (MQ=255)

                          aCCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCt                                                               <  2:5281692/93‑1 (MQ=255)

                          aCCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCt                                                               >  2:4081626/1‑93 (MQ=255)

                          aCCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCt                                                               >  1:8810884/1‑93 (MQ=255)

                            cGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTc                                                             >  2:6112258/1‑93 (MQ=255)

                               tttCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGc                                                          >  1:5039389/1‑93 (MQ=255)

                                ttCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGca                                                         <  2:8875768/93‑1 (MQ=255)

                                      aGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGcagtcagt                                                   >  2:2728685/1‑93 (MQ=255)

                                      aGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGcagtcagt                                                   >  1:3423201/1‑93 (MQ=255)

                                       gTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGtt                                                  >  2:5913519/1‑93 (MQ=255)

                                        tACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGTCTTCGGCAGTCAGttt                                                 >  2:3537206/1‑93 (MQ=255)

                                        tACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGttt                                                 >  2:6831188/1‑93 (MQ=255)

                                        tACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGttt                                                 >  1:275262/1‑93 (MQ=255)

                                        tACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGttt                                                 >  1:9535491/1‑93 (MQ=255)

                                         aCGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGtttt                                                <  1:1219507/93‑1 (MQ=255)

                                         aCGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGtttt                                                <  1:7993454/93‑1 (MQ=255)

                                          cGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGttttt                                               <  1:7487629/93‑1 (MQ=255)

                                           ggATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTc                                              >  1:9367823/1‑93 (MQ=255)

                                           ggATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTc                                              <  1:1781648/93‑1 (MQ=255)

                                            gATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCg                                             <  2:631028/93‑1 (MQ=255)

                                            gATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCg                                             >  2:2281040/1‑93 (MQ=255)

                                              ttCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTa                                           >  1:7006548/1‑93 (MQ=255)

                                              ttCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTa                                           >  2:262847/1‑93 (MQ=255)

                                                 aCGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGgc                                        <  2:7808711/93‑1 (MQ=255)

                                                  cGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGgca                                       <  2:7980483/93‑1 (MQ=255)

                                                   ggTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGgcag                                      >  1:10001998/1‑93 (MQ=255)

                                                    gTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGgcagc                                     <  1:3765023/93‑1 (MQ=255)

                                                    gTAAGCAGCATCCTGCTTGTCAAATGCGTCGGGAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGgcagc                                     >  2:8419242/1‑93 (MQ=255)

                                                      aaGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCaa                                   <  1:5992591/93‑1 (MQ=255)

                                                       agcagcATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAAc                                  <  1:7676128/93‑1 (MQ=255)

                                                        gcagcaTCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACa                                 <  2:1118668/93‑1 (MQ=255)

                                                         cagcaTCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAg                                <  1:6733746/93‑1 (MQ=255)

                                                          agcaTCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGc                               <  2:1383064/93‑1 (MQ=255)

                                                          agcaTCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGc                               >  2:4860154/1‑93 (MQ=255)

                                                          agcaTCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGc                               >  2:8521922/1‑93 (MQ=255)

                                                           gcaTCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGcc                              <  1:4542393/93‑1 (MQ=255)

                                                            caTCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCa                             <  1:3855382/93‑1 (MQ=255)

                                                             aTCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAg                            >  2:3282816/1‑93 (MQ=255)

                                                             aTCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTATCGTAGGCAGCAACAGCCAg                            <  2:1925187/93‑1 (MQ=255)

                                                              tCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGt                           <  1:5658125/93‑1 (MQ=255)

                                                              tCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGt                           >  1:8961046/1‑93 (MQ=255)

                                                                  gCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCaa                       <  1:9232557/93‑1 (MQ=255)

                                                                  gCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCaa                       <  2:7392138/93‑1 (MQ=255)

                                                                    ttGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACt                     <  1:585539/93‑1 (MQ=255)

                                                                        cAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTg                 >  1:2221603/1‑93 (MQ=255)

                                                                        cAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTg                 >  2:3184974/1‑93 (MQ=255)

                                                                         aaaTGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGa                <  1:5632508/93‑1 (MQ=255)

                                                                         aaaTGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGa                >  1:4747555/1‑93 (MQ=255)

                                                                          aaTGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGaa               <  2:5106751/93‑1 (MQ=255)

                                                                          aaTGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGaa               >  2:2474656/1‑93 (MQ=255)

                                                                          aaTGCGTCGATAGACGGCATGGACACCACGCGCGCTTTCACTCCTTCGGCAGTCAGTTTTTCTTAGGCAGCAACAGCCAGTTCAACTTCTGaa               <  1:5773139/93‑1 (MQ=255)

                                                                            ttcGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAAcc             <  2:9653275/91‑1 (MQ=255)

                                                                            tGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAAcc             >  2:7657597/1‑93 (MQ=255)

                                                                               ntNGGTANACGGCATGGACACNCCGCGGTCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGt          <  1:8355824/92‑1 (MQ=255)

                                                                               gTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGt          <  2:4277412/93‑1 (MQ=255)

                                                                               gTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGt          >  2:1262330/1‑93 (MQ=255)

                                                                                tCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTa         <  2:4686137/93‑1 (MQ=255)

                                                                                 cGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAg        <  1:6098227/93‑1 (MQ=255)

                                                                                 cGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAg        <  1:7099236/93‑1 (MQ=255)

                                                                                  ggTAGGCGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGc       <  1:5411665/93‑1 (MQ=255)

                                                                                  ggTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGc       <  1:4313455/93‑1 (MQ=255)

                                                                                  ggTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGc       <  1:1369031/93‑1 (MQ=255)

                                                                                  ggTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGc       <  1:9788708/93‑1 (MQ=255)

                                                                                   gTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCg      >  1:4911113/1‑93 (MQ=255)

                                                                                    tAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGa     <  2:8052943/93‑1 (MQ=255)

                                                                                      gacggcATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACATCCAGTTCAACTTCTGAACCGGTAGCGATg   >  2:9207749/1‑93 (MQ=255)

                                                                                      gacggcATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTACGGATg   >  1:3279505/1‑93 (MQ=255)

CCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGACATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGA  >  NC_000913/3077815‑3077994

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGACATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGAAAAT  >  NC_000913/3077812‑3077998

TACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGG                                                                                               <  SRR4302540.9291026/94‑1 (MQ=60)

TACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGG                                                                                               <  SRR4302540.9440063/94‑1 (MQ=60)

 ACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGC                                                                                              <  SRR4302540.5027813/94‑1 (MQ=60)

 ACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAACGCGTCGGTAGACGGC                                                                                              <  SRR4302540.5027814/94‑1 (MQ=60)

  CCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCA                                                                                             >  SRR4302540.338423/1‑94 (MQ=60)

   CCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCAT                                                                                            <  SRR4302540.8805625/94‑1 (MQ=60)

   CCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCAT                                                                                            <  SRR4302540.3531171/94‑1 (MQ=60)

   CCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCAT                                                                                            <  SRR4302540.3362218/94‑1 (MQ=60)

   CCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCAT                                                                                            <  SRR4302540.8805618/94‑1 (MQ=60)

   CCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCAT                                                                                            <  SRR4302540.3112569/94‑1 (MQ=60)

   CCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCAT                                                                                            <  SRR4302540.7467506/94‑1 (MQ=60)

    CGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATG                                                                                           <  SRR4302540.7438521/94‑1 (MQ=60)

    CGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATG                                                                                           <  SRR4302540.9719862/94‑1 (MQ=60)

    CGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATG                                                                                           <  SRR4302540.4003829/94‑1 (MQ=60)

    CGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATG                                                                                           <  SRR4302540.6420309/94‑1 (MQ=60)

    CGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATG                                                                                           <  SRR4302540.3845305/94‑1 (MQ=60)

     GCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGG                                                                                          >  SRR4302540.2836200/1‑94 (MQ=60)

     GCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGG                                                                                          >  SRR4302540.6315293/1‑94 (MQ=60)

       TTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGAC                                                                                        >  SRR4302540.3437610/1‑94 (MQ=60)

       TTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGAC                                                                                        >  SRR4302540.501731/1‑94 (MQ=60)

       TTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGAC                                                                                        >  SRR4302540.5916621/1‑94 (MQ=60)

       TTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGAC                                                                                        >  SRR4302540.6670622/1‑94 (MQ=60)

       TTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGAC                                                                                        >  SRR4302540.39572/1‑94 (MQ=60)

        TCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACA                                                                                       >  SRR4302540.4914289/1‑94 (MQ=60)

         CTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACAC                                                                                      <  SRR4302540.2073607/94‑1 (MQ=60)

         CTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACAC                                                                                      <  SRR4302540.6577762/94‑1 (MQ=60)

          TACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACC                                                                                     <  SRR4302540.2516082/94‑1 (MQ=60)

            CAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCACATGCGTCGGTAGGCGGCATGGACACCAG                                                                                   >  SRR4302540.4093174/1‑94 (MQ=60)

            CAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCAC                                                                                   <  SRR4302540.4508237/94‑1 (MQ=60)

            CAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCAC                                                                                   <  SRR4302540.8158128/94‑1 (MQ=60)

             CGCAACGCCTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGATACCACG                                                                                  <  SRR4302540.1643175/94‑1 (MQ=60)

             AGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACG                                                                                  <  SRR4302540.1558771/94‑1 (MQ=60)

              GCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGC                                                                                 <  SRR4302540.7676354/94‑1 (MQ=60)

              GCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGC                                                                                 >  SRR4302540.157377/1‑94 (MQ=60)

                AACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGC                                                                               <  SRR4302540.9777997/94‑1 (MQ=60)

                 ACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCG                                                                              <  SRR4302540.2459302/94‑1 (MQ=60)

                    CGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTT                                                                           >  SRR4302540.5926335/1‑94 (MQ=60)

                     GTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCAGGCGCGCTTT                                                                          >  SRR4302540.4184794/1‑94 (MQ=60)

                     GTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTT                                                                          >  SRR4302540.4184796/1‑94 (MQ=60)

                      TGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACAGCACGCGCGCTTTC                                                                         >  SRR4302540.10065081/1‑94 (MQ=60)

                      TGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTC                                                                         >  SRR4302540.2981526/1‑94 (MQ=60)

                      TGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTC                                                                         >  SRR4302540.2293684/1‑94 (MQ=60)

                        CAGTAACCGCTTTCGGCAGTACGGGTTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTGGGTAGACGGCATGGACACCACGAGCGCTTTCAC                                                                       >  SRR4302540.2956393/1‑94 (MQ=60)

                        CAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCAC                                                                       <  SRR4302540.6790869/94‑1 (MQ=60)

                        CAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCAC                                                                       <  SRR4302540.5145866/94‑1 (MQ=60)

                        CAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCAC                                                                       <  SRR4302540.2274211/94‑1 (MQ=60)

                        CAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCAC                                                                       >  SRR4302540.7869619/1‑94 (MQ=60)

                         AGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACG                                                                      >  SRR4302540.8607870/1‑94 (MQ=60)

                         AGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACG                                                                      <  SRR4302540.5229883/94‑1 (MQ=60)

                         AGTAACCGCTTTCGGCAGGACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACG                                                                      <  SRR4302540.3612758/94‑1 (MQ=60)

                          GTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGC                                                                     >  SRR4302540.9443302/1‑94 (MQ=60)

                          GTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGC                                                                     >  SRR4302540.7739745/1‑94 (MQ=60)

                          GTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGC                                                                     >  SRR4302540.6111226/1‑94 (MQ=60)

                          GTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGC                                                                     >  SRR4302540.4148002/1‑94 (MQ=60)

                            AACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCT                                                                   >  SRR4302540.8912754/1‑94 (MQ=60)

                            AACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCT                                                                   <  SRR4302540.5070118/94‑1 (MQ=60)

                             ACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTT                                                                  >  SRR4302540.5831841/1‑94 (MQ=60)

                             ACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTT                                                                  >  SRR4302540.5226849/1‑94 (MQ=60)

                              CCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTC                                                                 <  SRR4302540.9409100/94‑1 (MQ=60)

                               CGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCG                                                                <  SRR4302540.134830/94‑1 (MQ=60)

                               CGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCG                                                                <  SRR4302540.1278581/94‑1 (MQ=60)

                               CGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCG                                                                <  SRR4302540.2202936/94‑1 (MQ=60)

                               CGCTTGCGGCAGTACTGATTCACGGTAAGCAGCATCCTGCTTGTCAAAGGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCG                                                                <  SRR4302540.4936703/94‑1 (MQ=60)

                                GCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGG                                                               <  SRR4302540.6928291/94‑1 (MQ=60)

                                 CTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGC                                                              >  SRR4302540.5093899/1‑94 (MQ=60)

                                  TTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCA                                                             <  SRR4302540.8927796/94‑1 (MQ=60)

                                  TTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCA                                                             <  SRR4302540.7508459/94‑1 (MQ=60)

                                   TTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAG                                                            >  SRR4302540.1436915/1‑94 (MQ=60)

                                    TCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGT                                                           <  SRR4302540.157646/94‑1 (MQ=60)

                                    TCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGT                                                           <  SRR4302540.7086604/94‑1 (MQ=60)

                                    TCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGT                                                           >  SRR4302540.8898245/1‑94 (MQ=60)

                                      GGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCA                                                         >  SRR4302540.5362496/1‑94 (MQ=60)

                                      GGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCA                                                         <  SRR4302540.3680794/94‑1 (MQ=60)

                                       GCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAG                                                        <  SRR4302540.1725669/94‑1 (MQ=60)

                                       GCAGTACGGATTCACGGTAAGCAGCATCCTGCGTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAG                                                        <  SRR4302540.1725365/94‑1 (MQ=60)

                                        CAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGT                                                       >  SRR4302540.3460421/1‑94 (MQ=60)

                                        CAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGT                                                       >  SRR4302540.3278847/1‑94 (MQ=60)

                                        CAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGT                                                       <  SRR4302540.652041/94‑1 (MQ=60)

                                         AGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTT                                                      >  SRR4302540.607821/1‑94 (MQ=60)

                                          GTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTT                                                     >  SRR4302540.4593617/1‑94 (MQ=60)

                                          GTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTT                                                     >  SRR4302540.9648364/1‑94 (MQ=60)

                                          GTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTT                                                     >  SRR4302540.277972/1‑94 (MQ=60)

                                          GTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTT                                                     >  SRR4302540.3841683/1‑94 (MQ=60)

                                          GTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTT                                                     <  SRR4302540.6867489/94‑1 (MQ=60)

                                           TACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTT                                                    <  SRR4302540.3666048/94‑1 (MQ=60)

                                            ACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTT                                                   <  SRR4302540.8086509/94‑1 (MQ=60)

                                            ACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTT                                                   <  SRR4302540.1231987/94‑1 (MQ=60)

                                             CGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTC                                                  <  SRR4302540.7571213/94‑1 (MQ=60)

                                             CGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTC                                                  <  SRR4302540.7571212/94‑1 (MQ=60)

                                             CGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTC                                                  >  SRR4302540.9479363/1‑94 (MQ=60)

                                             CGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTC                                                  <  SRR4302540.398215/94‑1 (MQ=60)

                                              GGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCG                                                 <  SRR4302540.1801001/94‑1 (MQ=60)

                                               GATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGT                                                <  SRR4302540.6350756/94‑1 (MQ=60)

                                                ATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTA                                               >  SRR4302540.7084310/1‑94 (MQ=60)

                                                ATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTA                                               >  SRR4302540.863961/1‑94 (MQ=60)

                                                 TTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAG                                              <  SRR4302540.7132684/94‑1 (MQ=60)

                                                  TCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGG                                             <  SRR4302540.1413249/94‑1 (MQ=60)

                                                  TCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGG                                             <  SRR4302540.4668820/94‑1 (MQ=60)

                                                  TCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGG                                             <  SRR4302540.4199270/94‑1 (MQ=60)

                                                    ACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCTGTTTTTCGTAGGCA                                           >  SRR4302540.566932/1‑94 (MQ=60)

                                                    ACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCA                                           <  SRR4302540.7413308/94‑1 (MQ=60)

                                                    ACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGCAGGCA                                           >  SRR4302540.5313758/1‑94 (MQ=60)

                                                     CGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAG                                          >  SRR4302540.10118513/1‑94 (MQ=60)

                                                     CGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAG                                          <  SRR4302540.5906918/94‑1 (MQ=60)

                                                      GGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTCGGCAGC                                         >  SRR4302540.10012363/1‑94 (MQ=60)

                                                       GTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCA                                        >  SRR4302540.8331412/1‑94 (MQ=60)

                                                       GTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCA                                        >  SRR4302540.6045712/1‑94 (MQ=60)

                                                       GTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCA                                        <  SRR4302540.3806102/94‑1 (MQ=60)

                                                         AAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAAC                                      <  SRR4302540.5778896/94‑1 (MQ=60)

                                                         AAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAAC                                      <  SRR4302540.6058980/94‑1 (MQ=60)

                                                         AAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAAC                                      <  SRR4302540.4020517/94‑1 (MQ=60)

                                                          AGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACA                                     <  SRR4302540.7762872/94‑1 (MQ=60)

                                                           GCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAG                                    <  SRR4302540.3063323/94‑1 (MQ=60)

                                                           ACAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAG                                    <  SRR4302540.9277035/94‑1 (MQ=60)

                                                            CAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGC                                   >  SRR4302540.9025558/1‑94 (MQ=60)

                                                            CAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGC                                   <  SRR4302540.6808110/94‑1 (MQ=60)

                                                            CAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGC                                   <  SRR4302540.9401616/94‑1 (MQ=60)

                                                              GCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCA                                 <  SRR4302540.4591552/94‑1 (MQ=60)

                                                               CATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAG                                >  SRR4302540.5976168/1‑94 (MQ=60)

                                                               CATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAG                                <  SRR4302540.1613421/94‑1 (MQ=60)

                                                               CATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAG                                <  SRR4302540.3897299/94‑1 (MQ=60)

                                                                ATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGTCTTCGGCAGTCAGGTTTTCGTAGGCAGCAACAGCCAGT                               >  SRR4302540.6980137/1‑94 (MQ=60)

                                                                ATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGT                               >  SRR4302540.6495953/1‑94 (MQ=60)

                                                                ATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGT                               >  SRR4302540.9067073/1‑94 (MQ=60)

                                                                ATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGT                               >  SRR4302540.3474694/1‑94 (MQ=60)

                                                                ATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGT                               <  SRR4302540.3072260/94‑1 (MQ=60)

                                                                ATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGT                               >  SRR4302540.2238152/1‑94 (MQ=60)

                                                                 TCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTTAGTTTTTCGTAGGCAGCAACAGCCAGTT                              >  SRR4302540.4852681/1‑94 (MQ=60)

                                                                 TCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTT                              <  SRR4302540.6159780/94‑1 (MQ=60)

                                                                 TCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTT                              <  SRR4302540.554661/94‑1 (MQ=60)

                                                                 TCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTT                              <  SRR4302540.9689316/94‑1 (MQ=60)

                                                                 TCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTT                              <  SRR4302540.5720429/94‑1 (MQ=60)

                                                                  CCTGCTTGTCAAATGCGTCGGTAGACGTCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTC                             >  SRR4302540.3041239/1‑94 (MQ=60)

                                                                  CCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTC                             <  SRR4302540.3118828/94‑1 (MQ=60)

                                                                  CCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTC                             >  SRR4302540.7372386/1‑94 (MQ=60)

                                                                   CTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCA                            <  SRR4302540.3528165/94‑1 (MQ=60)

                                                                    TGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAC                           >  SRR4302540.5520745/1‑94 (MQ=60)

                                                                     GCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAAC                          <  SRR4302540.9343209/94‑1 (MQ=60)

                                                                      CTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACT                         <  SRR4302540.1958601/94‑1 (MQ=60)

                                                                      CTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACT                         >  SRR4302540.5723396/1‑94 (MQ=60)

                                                                      CTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACT                         <  SRR4302540.2383013/94‑1 (MQ=60)

                                                                       TTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTT                        <  SRR4302540.591858/94‑1 (MQ=60)

                                                                         GTCAAATGCGTCGGTGGACGGCATGGACCCCCCGCGCGCTTTCACGGCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCT                      <  SRR4302540.2674661/94‑1 (MQ=60)

                                                                         GTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCT                      <  SRR4302540.439243/94‑1 (MQ=60)

                                                                          TCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTG                     >  SRR4302540.2245553/1‑94 (MQ=60)

                                                                           CAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGA                    >  SRR4302540.4798217/1‑94 (MQ=60)

                                                                            AAATGCGTCGGTAGACGGCATGGACACCACGCGGGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAA                   <  SRR4302540.7825148/94‑1 (MQ=60)

                                                                            AAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCGGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAA                   <  SRR4302540.1828064/94‑1 (MQ=60)

                                                                            AAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAA                   <  SRR4302540.5694501/94‑1 (MQ=60)

                                                                            AAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAA                   <  SRR4302540.7825147/94‑1 (MQ=60)

                                                                            AAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAA                   <  SRR4302540.5694502/94‑1 (MQ=60)

                                                                            AAATGCGTCGGT‑GACGGCATGGACACCACGCGCGCTTTCACGCCCTCGGCAGTCAGGTTTTCGTAGGCAGCAACAGCCAGTTCCACTTCTTAAC                  >  SRR4302540.9602617/1‑94 (MQ=60)

                                                                             AATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCCGTTTTTCGTAGGATGCAACAGCCAGTTCACCTTCTGAAC                  >  SRR4302540.2776175/1‑94 (MQ=60)

                                                                             AATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAAC                  >  SRR4302540.9665778/1‑94 (MQ=60)

                                                                             AATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAAC                  <  SRR4302540.9985470/94‑1 (MQ=60)

                                                                             AATGCGTCGATAGACGGCATGGACACCACGCGCGCTTTCACTCCTTCGGCAGTCAGTTTTTCTTAGGCAGCAACAGCCAGTTCAACTTCTGAAC                  <  SRR4302540.5836910/94‑1 (MQ=60)

                                                                              ATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACC                 >  SRR4302540.1200610/1‑94 (MQ=60)

                                                                              ATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACC                 >  SRR4302540.9580573/1‑94 (MQ=60)

                                                                                 CGTCGGTAGGCGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGT              <  SRR4302540.391806/94‑1 (MQ=60)

                                                                                 CGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGT              >  SRR4302540.7434141/1‑94 (MQ=60)

                                                                                 CGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGT              >  SRR4302540.2964928/1‑94 (MQ=60)

                                                                                  NTNGGTANACGGCATGGACACNCCGCGGTCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTA             <  SRR4302540.8452802/94‑1 (MQ=60)

                                                                                  NTNGGTANACGGCATGGACACNACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTA             <  SRR4302540.8452803/94‑1 (MQ=60)

                                                                                  GTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTA             >  SRR4302540.511529/1‑94 (MQ=60)

                                                                                  GTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTA             >  SRR4302540.9820537/1‑94 (MQ=60)

                                                                                  GTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTA             >  SRR4302540.9820391/1‑94 (MQ=60)

                                                                                  GTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTA             >  SRR4302540.4368046/1‑94 (MQ=60)

                                                                                   GCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAG            <  SRR4302540.1279943/94‑1 (MQ=60)

                                                                                    CGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGC           <  SRR4302540.7178233/94‑1 (MQ=60)

                                                                                    CGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGC           <  SRR4302540.5710388/94‑1 (MQ=60)

                                                                                    CGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGC           <  SRR4302540.6166116/94‑1 (MQ=60)

                                                                                    CGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGC           >  SRR4302540.654159/1‑94 (MQ=60)

                                                                                     GGTAGGCGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCG          <  SRR4302540.5471167/94‑1 (MQ=60)

                                                                                     GGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCG          <  SRR4302540.9903387/94‑1 (MQ=60)

                                                                                     GGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCG          <  SRR4302540.9903386/94‑1 (MQ=60)

                                                                                     GGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCG          >  SRR4302540.4963989/1‑94 (MQ=60)

                                                                                     GGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCG          <  SRR4302540.1383532/94‑1 (MQ=60)

                                                                                     GGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCG          <  SRR4302540.4360418/94‑1 (MQ=60)

                                                                                     GGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCG          >  SRR4302540.1801824/1‑94 (MQ=60)

                                                                                      GTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGA         >  SRR4302540.9193321/1‑94 (MQ=60)

                                                                                      GTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGA         >  SRR4302540.1178155/1‑94 (MQ=60)

                                                                                       TAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGAT        <  SRR4302540.9643554/94‑1 (MQ=60)

                                                                                       TAGACGGCATGGAAACCACGCGAACTTTAACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCCACTTCTGAACCGGTAGCGCT        <  SRR4302540.9051415/94‑1 (MQ=60)

                                                                                        AGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTACGGATG       >  SRR4302540.3315326/1‑94 (MQ=60)

                                                                                            GGCATGGACACCACGCGCGCTTTCCCGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGCAGCGCTGAAAA   >  SRR4302540.5262636/1‑94 (MQ=60)

                                                                                            GGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGAAAA   >  SRR4302540.5262635/1‑94 (MQ=60)

                                                                                            GGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGAAAA   >  SRR4302540.7371445/1‑94 (MQ=60)

                                                                                            GGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGAAAA   >  SRR4302540.9218178/1‑94 (MQ=60)

                                                                                            GGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGAAAA   >  SRR4302540.5512676/1‑94 (MQ=60)

                                                                                             GCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGAAAAT  <  SRR4302540.6703233/94‑1 (MQ=60)

                                                                                             GCATGGACACCACGCGCGCTTTCACCCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGAAAAT  <  SRR4302540.8309590/94‑1 (MQ=60)

TACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGACATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGAAAAT  >  NC_000913/3077812‑3077998

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`