Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,472,167	A→C	V8G (GTA→GGA)	rpsL ←	30S ribosomal subunit protein S12

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,472,167	0	A	C	99.4%	1633.6 / ‑2.0	508	V8G (GTA→GGA)	rpsL	30S ribosomal subunit protein S12
Reads supporting (aligned to +/- strand): ref base A (2/1); new base C (237/267); total (239/269)
Fisher's exact test for biased strand distribution p-value = 6.04e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.47e-01

Only 100 of 523 total aligned reads displayed.

TATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGG  >  NC_000913/3472077‑3472256

tataCACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTccc                                                                                         <  2:8508282/93‑1 (MQ=255)

tataCACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTccc                                                                                         >  1:339938/1‑93 (MQ=255)

 ataCACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCa                                                                                        >  1:5577686/1‑93 (MQ=255)

  taCACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAg                                                                                       <  1:8915219/93‑1 (MQ=255)

  taCACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAg                                                                                       >  2:6257577/1‑93 (MQ=255)

   acacGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGc                                                                                      <  1:5019395/93‑1 (MQ=255)

    cacGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCt                                                                                     >  2:3667957/1‑93 (MQ=255)

      cGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTgg                                                                                   <  1:5866455/93‑1 (MQ=255)

       gAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGt                                                                                  >  1:4145899/1‑93 (MQ=255)

        aGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGtt                                                                                 >  1:6346489/1‑93 (MQ=255)

         gTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTa                                                                                >  1:6595342/1‑93 (MQ=255)

         gTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTa                                                                                >  1:2989382/1‑93 (MQ=255)

          tACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTaa                                                                               <  2:3018518/93‑1 (MQ=255)

           aCATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAAc                                                                              <  2:9166171/93‑1 (MQ=255)

            cATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACt                                                                             >  1:9590681/1‑93 (MQ=255)

             aTACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTg                                                                            <  2:20689/93‑1 (MQ=255)

             aTACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTg                                                                            <  2:8265194/93‑1 (MQ=255)

              tACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGt                                                                           <  2:3734243/93‑1 (MQ=255)

              tACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGt                                                                           <  1:7350074/93‑1 (MQ=255)

               aCGCCGCGTTTTTGCGGGCATGCTTCAAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGtt                                                                          <  2:2523061/93‑1 (MQ=255)

               aCGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGtt                                                                          <  2:4053349/93‑1 (MQ=255)

               aCGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGtt                                                                          >  1:459286/1‑93 (MQ=255)

                 gCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGc                                                                        <  1:611130/93‑1 (MQ=255)

                 gCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGc                                                                        >  2:9293174/1‑93 (MQ=255)

                 gCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGc                                                                        >  2:1087190/1‑93 (MQ=255)

                  ccACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGcc                                                                       >  2:1063080/1‑93 (MQ=255)

                  ccACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGcc                                                                       <  2:8169536/93‑1 (MQ=255)

                   cACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCa                                                                      >  1:4062092/1‑93 (MQ=255)

                    aCGTTTTTGCGGGCATGCTTCGAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCAt                                                                     <  2:4616778/93‑1 (MQ=255)

                    aCGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCAt                                                                     >  1:9032249/1‑93 (MQ=255)

                    aCGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCAt                                                                     >  2:8002328/1‑93 (MQ=255)

                    aCGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCAt                                                                     <  1:10014240/93‑1 (MQ=255)

                    aCGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCAt                                                                     <  1:1527094/93‑1 (MQ=255)

                    aCGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCAt                                                                     >  1:515669/1‑93 (MQ=255)

                     cGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCAtt                                                                    >  1:3214839/1‑93 (MQ=255)

                     cGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCAtt                                                                    >  2:2275156/1‑93 (MQ=255)

                     cGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCAtt                                                                    <  2:5493043/93‑1 (MQ=255)

                      gTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTa                                                                   <  2:8652103/93‑1 (MQ=255)

                      gTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTa                                                                   >  2:65767/1‑93 (MQ=255)

                       tttttGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTaa                                                                  <  1:4260047/93‑1 (MQ=255)

                       tttttGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTaa                                                                  >  2:5837874/1‑93 (MQ=255)

                        ttttGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTaaa                                                                 <  2:675705/93‑1 (MQ=255)

                        ttttGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTaaa                                                                 <  1:9668644/93‑1 (MQ=255)

                        ttttGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTaaa                                                                 >  1:4445423/1‑93 (MQ=255)

                            gCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGc                                                             <  2:351714/93‑1 (MQ=255)

                              gggCATGCTTCCAGCGCACGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTc                                                           >  2:1221848/1‑93 (MQ=255)

                               ggCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTcc                                                          <  2:3330128/93‑1 (MQ=255)

                               ggCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTcc                                                          <  1:3588838/93‑1 (MQ=255)

                                gCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCt                                                         <  2:6963468/93‑1 (MQ=255)

                                gCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCt                                                         >  1:5273339/1‑93 (MQ=255)

                                  aTGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTgg                                                       <  1:7097321/93‑1 (MQ=255)

                                  aTGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTgg                                                       >  1:1693571/1‑93 (MQ=255)

                                   tGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGt                                                      >  2:260649/1‑93 (MQ=255)

                                   tGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGt                                                      <  1:7188359/93‑1 (MQ=255)

                                       tCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTa                                                  >  2:6388327/1‑93 (MQ=255)

                                        ccAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAg                                                 >  1:1864663/1‑93 (MQ=255)

                                        ccAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAg                                                 >  1:9311800/1‑93 (MQ=255)

                                          aggccAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCt                                               <  2:7606199/89‑1 (MQ=255)

                                             gcAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCtttt                                            <  2:1808180/93‑1 (MQ=255)

                                             gcAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCtttt                                            <  2:7741037/93‑1 (MQ=255)

                                              cAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTg                                           <  2:6595700/93‑1 (MQ=255)

                                                  cACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTc                                       <  1:242334/93‑1 (MQ=255)

                                                  cACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTc                                       <  2:2789043/93‑1 (MQ=255)

                                                   aCGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCg                                      >  2:5632358/1‑93 (MQ=255)

                                                    cGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGt                                     <  2:1509668/93‑1 (MQ=255)

                                                    cGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGt                                     >  2:4776397/1‑93 (MQ=255)

                                                     gTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTa                                    >  1:9802767/1‑93 (MQ=255)

                                                      ttGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTaa                                   >  2:7235624/1‑93 (MQ=255)

                                                        gCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAac                                 >  2:4252990/1‑93 (MQ=255)

                                                         cTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAaca                                <  1:2563945/93‑1 (MQ=255)

                                                          ttttCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAacac                               <  1:9125665/93‑1 (MQ=255)

                                                             tCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGta                            <  1:2802794/93‑1 (MQ=255)

                                                               gCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGtaat                          >  1:2112469/1‑93 (MQ=255)

                                                                cAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGtaata                         <  2:880096/93‑1 (MQ=255)

                                                                  aCTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATaaa                       <  2:3237867/93‑1 (MQ=255)

                                                                   cTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATaaaa                      <  2:1612727/93‑1 (MQ=255)

                                                                    tttGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAAc                     >  2:7403786/1‑93 (MQ=255)

                                                                    tttGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAAc                     <  1:4829903/93‑1 (MQ=255)

                                                                    tttGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAAc                     >  1:3062887/1‑93 (MQ=255)

                                                                     ttGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACg                    <  1:8379083/93‑1 (MQ=255)

                                                                      tGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGt                   <  1:6375264/93‑1 (MQ=255)

                                                                      tGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGt                   <  1:3831123/93‑1 (MQ=255)

                                                                      tGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACATAATAAAACGt                   <  2:6346525/93‑1 (MQ=255)

                                                                       gCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTc                  <  2:4972234/93‑1 (MQ=255)

                                                                          aGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTc               <  1:865105/93‑1 (MQ=255)

                                                                          aGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTc               >  1:6839220/1‑93 (MQ=255)

                                                                           gCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCGTTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTca              <  1:5403878/93‑1 (MQ=255)

                                                                              cGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTcacac           >  1:744732/1‑93 (MQ=255)

                                                                                tGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTcacacca         >  1:3736200/1‑91 (MQ=255)

                                                                                 ggTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAat        <  2:6066963/93‑1 (MQ=255)

                                                                                  gTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAata       <  1:2715924/93‑1 (MQ=255)

                                                                                  gTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAata       <  1:988628/93‑1 (MQ=255)

                                                                                  gTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAata       <  1:8257403/93‑1 (MQ=255)

                                                                                  gTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAata       <  1:129230/93‑1 (MQ=255)

                                                                                   tttGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAatat      >  2:9609459/1‑93 (MQ=255)

                                                                                    ttGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATg     >  1:8038833/1‑93 (MQ=255)

                                                                                    ttGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATg     <  1:6225677/93‑1 (MQ=255)

                                                                                    ttGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATg     >  1:1172014/1‑93 (MQ=255)

                                                                                     tGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGa    <  2:508381/93‑1 (MQ=255)

                                                                                       cGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAgg  >  1:790926/1‑93 (MQ=255)

TATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGG  >  NC_000913/3472077‑3472256

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 290 total aligned reads displayed.

GTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACG  >  NC_000913/3472074‑3472259

GTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTC                                                                                              >  SRR4302540.7057777/1‑94 (MQ=60)

GTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTC                                                                                              <  SRR4302540.3362926/94‑1 (MQ=60)

GTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTC                                                                                              >  SRR4302540.5871755/1‑94 (MQ=60)

 TATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCC                                                                                             <  SRR4302540.2017007/94‑1 (MQ=60)

 TATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTCTTCGCAACTTTGCGAGCACGTGGTTTGCGTCC                                                                                             >  SRR4302540.4425050/1‑94 (MQ=60)

  ATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCC                                                                                            >  SRR4302540.3982031/1‑94 (MQ=60)

  ATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCC                                                                                            >  SRR4302540.9195939/1‑94 (MQ=60)

  ATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCC                                                                                            >  SRR4302540.1145117/1‑94 (MQ=60)

   TATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCA                                                                                           >  SRR4302540.2689563/1‑94 (MQ=60)

    ATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAG                                                                                          <  SRR4302540.8716725/94‑1 (MQ=60)

     TACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTCTGCGAGCACGTGGTTTGCGTCCCAGC                                                                                         <  SRR4302540.2269894/94‑1 (MQ=60)

      ACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCT                                                                                        >  SRR4302540.473692/1‑94 (MQ=60)

      ACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCT                                                                                        <  SRR4302540.5073734/94‑1 (MQ=60)

      ACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCT                                                                                        >  SRR4302540.5402222/1‑94 (MQ=60)

      ACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCT                                                                                        <  SRR4302540.6425935/94‑1 (MQ=60)

       CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTG                                                                                       >  SRR4302540.5044429/1‑94 (MQ=60)

       CACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTG                                                                                       <  SRR4302540.6031671/94‑1 (MQ=60)

        ACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGG                                                                                      >  SRR4302540.8355045/1‑94 (MQ=60)

        ACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGG                                                                                      <  SRR4302540.6525462/94‑1 (MQ=60)

         CGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGT                                                                                     >  SRR4302540.998520/1‑94 (MQ=60)

         CGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGT                                                                                     >  SRR4302540.1329345/1‑94 (MQ=60)

          GAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTT                                                                                    <  SRR4302540.4508824/94‑1 (MQ=60)

          GAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTT                                                                                    <  SRR4302540.3051066/94‑1 (MQ=60)

           AGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTA                                                                                   <  SRR4302540.9016198/94‑1 (MQ=60)

           AGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTA                                                                                   >  SRR4302540.3022347/1‑94 (MQ=60)

            GTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAA                                                                                  >  SRR4302540.3847778/1‑94 (MQ=60)

            GTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAA                                                                                  <  SRR4302540.9198803/94‑1 (MQ=60)

             TACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAAC                                                                                 <  SRR4302540.2823772/94‑1 (MQ=60)

             TACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAAC                                                                                 >  SRR4302540.6293035/1‑94 (MQ=60)

              TCATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACT                                                                                <  SRR4302540.9919675/94‑1 (MQ=60)

              ACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGTACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACA                                                                                >  SRR4302540.9703876/1‑94 (MQ=60)

              ACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACT                                                                                >  SRR4302540.8108212/1‑94 (MQ=60)

              ACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACT                                                                                >  SRR4302540.9703875/1‑94 (MQ=60)

              ACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACT                                                                                >  SRR4302540.9968243/1‑94 (MQ=60)

              ACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACT                                                                                >  SRR4302540.4177055/1‑94 (MQ=60)

               CATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTG                                                                               >  SRR4302540.3680605/1‑94 (MQ=60)

                ATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGT                                                                              >  SRR4302540.3181347/1‑94 (MQ=60)

                ATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGT                                                                              <  SRR4302540.1698150/94‑1 (MQ=60)

                 TACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTT                                                                             >  SRR4302540.464190/1‑94 (MQ=60)

                 TACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTT                                                                             <  SRR4302540.7432068/94‑1 (MQ=60)

                  ACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTG                                                                            <  SRR4302540.3539474/94‑1 (MQ=60)

                   CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGC                                                                           <  SRR4302540.8581706/94‑1 (MQ=60)

                   CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGC                                                                           >  SRR4302540.8775518/1‑94 (MQ=60)

                    GCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCC                                                                          >  SRR4302540.3721439/1‑94 (MQ=60)

                    GCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCC                                                                          <  SRR4302540.617658/94‑1 (MQ=60)

                    GCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCC                                                                          >  SRR4302540.6275411/1‑94 (MQ=60)

                     CCACGTTTTTGCGGGCGTGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGGGGTTTGCGTCCCAGCTGGTTAACTGTTGCCA                                                                         <  SRR4302540.243224/94‑1 (MQ=60)

                     CCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCA                                                                         >  SRR4302540.4105890/1‑94 (MQ=60)

                     CCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCA                                                                         >  SRR4302540.3261550/1‑94 (MQ=60)

                     CCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCA                                                                         >  SRR4302540.4114810/1‑94 (MQ=60)

                      CACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCAT                                                                        >  SRR4302540.5679598/1‑94 (MQ=60)

                      CACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCAT                                                                        >  SRR4302540.264162/1‑94 (MQ=60)

                      CACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCAT                                                                        >  SRR4302540.1659926/1‑94 (MQ=60)

                       ACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATT                                                                       <  SRR4302540.1544008/94‑1 (MQ=60)

                       ACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATT                                                                       >  SRR4302540.3249748/1‑94 (MQ=60)

                        CGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTA                                                                      >  SRR4302540.8107489/1‑94 (MQ=60)

                         GTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAA                                                                     >  SRR4302540.5232114/1‑94 (MQ=60)

                         GTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAA                                                                     >  SRR4302540.8007212/1‑94 (MQ=60)

                         GTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAA                                                                     >  SRR4302540.7998091/1‑94 (MQ=60)

                         GTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAA                                                                     <  SRR4302540.6869525/94‑1 (MQ=60)

                         GTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCCAGCACGTGGTTTGCGTCCCAGCTGGTGAACTGTTGCCATTAA                                                                     <  SRR4302540.6869526/94‑1 (MQ=60)

                          TTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAA                                                                    <  SRR4302540.4306387/94‑1 (MQ=60)

                          TTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAA                                                                    >  SRR4302540.4493599/1‑94 (MQ=60)

                          TTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAA                                                                    <  SRR4302540.743066/94‑1 (MQ=60)

                          TTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAA                                                                    >  SRR4302540.2492700/1‑94 (MQ=60)

                           TTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAAT                                                                   <  SRR4302540.1502900/94‑1 (MQ=60)

                           TTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAAT                                                                   <  SRR4302540.6299662/94‑1 (MQ=60)

                           TTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAAT                                                                   <  SRR4302540.324811/94‑1 (MQ=60)

                           TTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTGTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAAT                                                                   <  SRR4302540.7320701/94‑1 (MQ=60)

                             TTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAG                                                                 <  SRR4302540.7315199/94‑1 (MQ=60)

                             TTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAG                                                                 <  SRR4302540.6436077/94‑1 (MQ=60)

                             TTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAG                                                                 <  SRR4302540.564047/94‑1 (MQ=60)

                              TGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGC                                                                <  SRR4302540.5526975/94‑1 (MQ=60)

                               GCGGGCATTCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCT                                                               <  SRR4302540.9822224/94‑1 (MQ=60)

                               GCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCT                                                               <  SRR4302540.9513694/94‑1 (MQ=60)

                                 GGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCC                                                             >  SRR4302540.6413014/1‑94 (MQ=60)

                                  GGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCT                                                            <  SRR4302540.8500305/94‑1 (MQ=60)

                                  GGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCT                                                            <  SRR4302540.1813719/94‑1 (MQ=60)

                                  GGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCT                                                            >  SRR4302540.5330902/1‑94 (MQ=60)

                                  GGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCT                                                            >  SRR4302540.3080254/1‑94 (MQ=60)

                                  GGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCT                                                            <  SRR4302540.3628045/94‑1 (MQ=60)

                                   GCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTG                                                           <  SRR4302540.5505971/94‑1 (MQ=60)

                                   GCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTG                                                           <  SRR4302540.125598/94‑1 (MQ=60)

                                    CATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGG                                                          >  SRR4302540.3726217/1‑94 (MQ=60)

                                    CATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGG                                                          >  SRR4302540.944216/1‑94 (MQ=60)

                                    CATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGG                                                          >  SRR4302540.1711933/1‑94 (MQ=60)

                                     ATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGT                                                         >  SRR4302540.5649211/1‑94 (MQ=60)

                                     ATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGT                                                         >  SRR4302540.7911958/1‑94 (MQ=60)

                                     ATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGT                                                         >  SRR4302540.1231929/1‑94 (MQ=60)

                                     ATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGT                                                         >  SRR4302540.10075802/1‑94 (MQ=60)

                                     ATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTCCCATTAAATAGCTCCTGGT                                                         >  SRR4302540.3229817/1‑94 (MQ=60)

                                      TGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTT                                                        <  SRR4302540.7268487/94‑1 (MQ=60)

                                      TGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTT                                                        <  SRR4302540.3886541/94‑1 (MQ=60)

                                       GCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTT                                                       >  SRR4302540.2658485/1‑94 (MQ=60)

                                        CTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTT                                                      <  SRR4302540.977134/94‑1 (MQ=60)

                                        CTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTT                                                      <  SRR4302540.1728096/94‑1 (MQ=60)

                                        CTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTT                                                      >  SRR4302540.790347/1‑94 (MQ=60)

                                          TCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAG                                                    >  SRR4302540.4839822/1‑94 (MQ=60)

                                          TCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAG                                                    >  SRR4302540.9422954/1‑94 (MQ=60)

                                          TCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAG                                                    >  SRR4302540.1885102/1‑94 (MQ=60)

                                          TCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAG                                                    <  SRR4302540.102281/94‑1 (MQ=60)

                                          TCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGCTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAG                                                    <  SRR4302540.6131168/94‑1 (MQ=60)

                                           CCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGC                                                   >  SRR4302540.5164224/1‑94 (MQ=60)

                                             AGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTT                                                 >  SRR4302540.9871396/1‑94 (MQ=60)

                                             AGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTT                                                 >  SRR4302540.10151684/1‑94 (MQ=60)

                                              GCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTT                                                <  SRR4302540.4399021/94‑1 (MQ=60)

                                              GCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTT                                                <  SRR4302540.515674/94‑1 (MQ=60)

                                               CGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTT                                               >  SRR4302540.2277403/1‑94 (MQ=60)

                                               CGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTT                                               >  SRR4302540.904541/1‑94 (MQ=60)

                                               CGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTT                                               >  SRR4302540.4596992/1‑94 (MQ=60)

                                                GCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTG                                              <  SRR4302540.3626366/94‑1 (MQ=60)

                                                GCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGCTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTG                                              <  SRR4302540.6523552/94‑1 (MQ=60)

                                                 CAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGC                                             >  SRR4302540.6252129/1‑94 (MQ=60)

                                                  AGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCT                                            <  SRR4302540.7199973/94‑1 (MQ=60)

                                                  AGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCT                                            >  SRR4302540.4027329/1‑94 (MQ=60)

                                                   GGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTT                                           <  SRR4302540.8399084/94‑1 (MQ=60)

                                                    GCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTC                                          >  SRR4302540.5954992/1‑94 (MQ=60)

                                                     CACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCG                                         <  SRR4302540.4394683/94‑1 (MQ=60)

                                                     CACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCG                                         <  SRR4302540.244674/94‑1 (MQ=60)

                                                     CACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCG                                         >  SRR4302540.1895408/1‑94 (MQ=60)

                                                      ACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGT                                        >  SRR4302540.2008581/1‑94 (MQ=60)

                                                      ACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGT                                        >  SRR4302540.4278383/1‑94 (MQ=60)

                                                      ACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGT                                        >  SRR4302540.9288707/1‑94 (MQ=60)

                                                       CGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTA                                       >  SRR4302540.9917525/1‑94 (MQ=60)

                                                       CGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTA                                       >  SRR4302540.6359270/1‑94 (MQ=60)

                                                        GTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAA                                      >  SRR4302540.9179409/1‑94 (MQ=60)

                                                        GTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAA                                      <  SRR4302540.717924/94‑1 (MQ=60)

                                                          TGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTGCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAAC                                    <  SRR4302540.4181138/94‑1 (MQ=60)

                                                          TGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAAC                                    <  SRR4302540.8218407/94‑1 (MQ=60)

                                                           GCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACA                                   >  SRR4302540.8194112/1‑94 (MQ=60)

                                                            CTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACAC                                  >  SRR4302540.1002480/1‑94 (MQ=60)

                                                             TTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACG                                 <  SRR4302540.7098356/94‑1 (MQ=60)

                                                             TTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACG                                 <  SRR4302540.6963641/94‑1 (MQ=60)

                                                             TTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACG                                 <  SRR4302540.9235355/94‑1 (MQ=60)

                                                             TTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACG                                 <  SRR4302540.2463693/94‑1 (MQ=60)

                                                             TTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACG                                 <  SRR4302540.4819934/94‑1 (MQ=60)

                                                              TTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGT                                >  SRR4302540.5401802/1‑94 (MQ=60)

                                                              TTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGT                                <  SRR4302540.3276821/94‑1 (MQ=60)

                                                                TCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAA                              <  SRR4302540.2094002/94‑1 (MQ=60)

                                                                TCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAA                              <  SRR4302540.2833067/94‑1 (MQ=60)

                                                                 CGGAACTTTGCGAGCACGTGGTGTGCGTCTCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAAT                             <  SRR4302540.3232215/94‑1 (MQ=60)

                                                                 CGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAAT                             >  SRR4302540.2135140/1‑94 (MQ=60)

                                                                  GCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATA                            <  SRR4302540.2776490/94‑1 (MQ=60)

                                                                   CAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAA                           >  SRR4302540.2674171/1‑94 (MQ=60)

                                                                   CAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAA                           <  SRR4302540.2904603/94‑1 (MQ=60)

                                                                    AACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAA                          >  SRR4302540.4582122/1‑94 (MQ=60)

                                                                    AACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAA                          >  SRR4302540.3487438/1‑94 (MQ=60)

                                                                     ACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAA                         >  SRR4302540.9126674/1‑94 (MQ=60)

                                                                     ACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAA                         <  SRR4302540.8947394/94‑1 (MQ=60)

                                                                     ACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAA                         <  SRR4302540.6423499/94‑1 (MQ=60)

                                                                      CTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAAC                        <  SRR4302540.6749701/94‑1 (MQ=60)

                                                                      CTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAAC                        >  SRR4302540.3815634/1‑94 (MQ=60)

                                                                      CTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAAC                        <  SRR4302540.151625/94‑1 (MQ=60)

                                                                       TTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACG                       <  SRR4302540.4881631/94‑1 (MQ=60)

                                                                       TTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACG                       >  SRR4302540.9720946/1‑94 (MQ=60)

                                                                        TTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGT                      <  SRR4302540.5489698/94‑1 (MQ=60)

                                                                        TTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGT                      <  SRR4302540.8476314/94‑1 (MQ=60)

                                                                        TTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGT                      >  SRR4302540.9425969/1‑94 (MQ=60)

                                                                        TTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCCTAAACACGAAATAACACGT                      >  SRR4302540.7234872/1‑94 (MQ=60)

                                                                         TGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTC                     <  SRR4302540.3872810/94‑1 (MQ=60)

                                                                         TGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTC                     <  SRR4302540.6446246/94‑1 (MQ=60)

                                                                          GCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCC                    >  SRR4302540.8579847/1‑94 (MQ=60)

                                                                           CGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCT                   <  SRR4302540.2749058/94‑1 (MQ=60)

                                                                            GAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTC                  <  SRR4302540.6990647/94‑1 (MQ=60)

                                                                            GAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTC                  <  SRR4302540.4191635/94‑1 (MQ=60)

                                                                             AGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCA                 <  SRR4302540.874291/94‑1 (MQ=60)

                                                                             AGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCA                 >  SRR4302540.5296357/1‑94 (MQ=60)

                                                                             AGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCA                 <  SRR4302540.7573775/94‑1 (MQ=60)

                                                                              GCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCGTTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCAC                <  SRR4302540.5463289/94‑1 (MQ=60)

                                                                               CACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACA               >  SRR4302540.8241308/1‑94 (MQ=60)

                                                                               CACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACA               <  SRR4302540.6785285/94‑1 (MQ=60)

                                                                                ACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACAC              >  SRR4302540.752666/1‑94 (MQ=60)

                                                                                ACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACAC              <  SRR4302540.1845866/94‑1 (MQ=60)

                                                                                  GTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAA            >  SRR4302540.7475246/1‑94 (MQ=60)

                                                                                  GTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAA            >  SRR4302540.3044826/1‑94 (MQ=60)

                                                                                  GTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAA            >  SRR4302540.3776964/1‑94 (MQ=60)

                                                                                   TGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAAT           >  SRR4302540.7367886/1‑94 (MQ=60)

                                                                                   TGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAAT           <  SRR4302540.9020546/94‑1 (MQ=60)

                                                                                    GGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATA          <  SRR4302540.9742859/94‑1 (MQ=60)

                                                                                     GTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATAT         <  SRR4302540.130593/94‑1 (MQ=60)

                                                                                     GTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATAT         <  SRR4302540.8353364/94‑1 (MQ=60)

                                                                                      TTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATG        >  SRR4302540.1184144/1‑94 (MQ=60)

                                                                                      TTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATG        >  SRR4302540.8132256/1‑94 (MQ=60)

                                                                                       TTTCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGA       <  SRR4302540.6595467/94‑1 (MQ=60)

                                                                                       TTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGA       <  SRR4302540.9378748/94‑1 (MQ=60)

                                                                                       TTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGA       <  SRR4302540.5206068/94‑1 (MQ=60)

                                                                                       TTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGA       <  SRR4302540.6294918/94‑1 (MQ=60)

                                                                                       TTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGA       <  SRR4302540.4250275/94‑1 (MQ=60)

                                                                                        TGCGTCTCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTCGCTTCGTTAACATGTAATAAAACGTTCTCACACAATATGAG      >  SRR4302540.9093673/1‑94 (MQ=60)

                                                                                        TGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAG      <  SRR4302540.5370640/94‑1 (MQ=60)

                                                                                        TGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAG      <  SRR4302540.2575024/94‑1 (MQ=60)

                                                                                        TGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAG      <  SRR4302540.2860575/94‑1 (MQ=60)

                                                                                         GCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGG     <  SRR4302540.523325/94‑1 (MQ=60)

                                                                                         GCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGG     <  SRR4302540.496943/94‑1 (MQ=60)

                                                                                         GCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGG     <  SRR4302540.9256356/94‑1 (MQ=60)

                                                                                           GTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGAC   <  SRR4302540.2859503/94‑1 (MQ=60)

                                                                                           GTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGAC   >  SRR4302540.3399279/1‑94 (MQ=60)

                                                                                           GTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGAC   <  SRR4302540.1958955/94‑1 (MQ=60)

                                                                                           GTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGAC   <  SRR4302540.5794559/94‑1 (MQ=60)

                                                                                           GTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGAC   >  SRR4302540.10074475/1‑94 (MQ=60)

GTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACG  >  NC_000913/3472074‑3472259

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`