Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,494,690	A→G	A17A (GCA→GCG)	nirC →	Nitrite transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,494,690	0	A	G	100.0%	1056.2 / NA	330	A17A (GCA→GCG)	nirC	Nitrite transporter
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (213/117); total (213/117)

Only 100 of 338 total aligned reads displayed.

TTGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCACGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCAC  >  NC_000913/3494600‑3494779

ttGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGcgcg                                                                                         >  1:6647093/1‑93 (MQ=255)

        ttttttGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCgg                                                                                 <  1:4405306/93‑1 (MQ=255)

          ttttGTTTTTATTTTTTAAATGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCa                                                                               <  1:7037065/93‑1 (MQ=255)

          ttttGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCa                                                                               >  2:2020585/1‑93 (MQ=255)

           tttGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCaa                                                                              >  2:2426259/1‑93 (MQ=255)

           tttGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCaa                                                                              >  2:3124456/1‑93 (MQ=255)

            ttGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCaaa                                                                             >  2:7153815/1‑93 (MQ=255)

             tGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAAt                                                                            >  2:2363675/1‑93 (MQ=255)

             tGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAAt                                                                            >  2:6289145/1‑93 (MQ=255)

              gTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATa                                                                           <  1:78739/93‑1 (MQ=255)

              gTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATa                                                                           <  2:1806049/93‑1 (MQ=255)

              gTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATa                                                                           <  2:4755140/93‑1 (MQ=255)

              gTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATa                                                                           >  2:509610/1‑93 (MQ=255)

               tttttATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATaa                                                                          >  1:8317864/1‑93 (MQ=255)

               tttttATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATaa                                                                          >  1:7622596/1‑93 (MQ=255)

                ttttATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAAc                                                                         >  1:6240503/1‑93 (MQ=255)

                ttttATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAAc                                                                         <  2:6140603/93‑1 (MQ=255)

                 tttATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAAcc                                                                        >  2:3775489/1‑93 (MQ=255)

                  ttATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAAccc                                                                       >  1:9480444/1‑93 (MQ=255)

                  ttATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAAccc                                                                       >  2:6698093/1‑93 (MQ=255)

                   tATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCg                                                                      >  2:6951776/1‑93 (MQ=255)

                   tATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCg                                                                      >  1:4998079/1‑93 (MQ=255)

                    aTTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGc                                                                     <  1:984367/93‑1 (MQ=255)

                     ttttttAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCt                                                                    >  2:6342247/1‑93 (MQ=255)

                     ttttttAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCt                                                                    <  2:5337625/93‑1 (MQ=255)

                     ttttttAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCt                                                                    >  1:9215178/1‑93 (MQ=255)

                      tttttAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTc                                                                   >  2:8426194/1‑93 (MQ=255)

                        tttAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCgg                                                                 <  2:5989902/93‑1 (MQ=255)

                         ttAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGc                                                                >  1:3801071/1‑93 (MQ=255)

                          tAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCt                                                               >  1:964123/1‑93 (MQ=255)

                          tAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCt                                                               >  2:8692462/1‑93 (MQ=255)

                           aaaGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCtt                                                              >  1:4836128/1‑93 (MQ=255)

                           aaaGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCtt                                                              >  1:9437350/1‑93 (MQ=255)

                           aaaGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCtt                                                              >  1:6791346/1‑93 (MQ=255)

                           aaaGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCtt                                                              <  1:3189116/93‑1 (MQ=255)

                             aGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCtttt                                                            >  2:3579643/1‑93 (MQ=255)

                               gATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTgg                                                          >  1:1156871/1‑93 (MQ=255)

                               gATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTgg                                                          <  1:8407868/93‑1 (MQ=255)

                               gATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTgg                                                          <  2:1620989/93‑1 (MQ=255)

                                 tAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTgggc                                                        >  2:3058147/1‑92 (MQ=255)

                                 tAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGt                                                        >  2:7242622/1‑93 (MQ=255)

                                 tAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGt                                                        >  2:3531341/1‑93 (MQ=255)

                                 tAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGt                                                        >  2:5009358/1‑93 (MQ=255)

                                 tAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGt                                                        >  2:9525026/1‑93 (MQ=255)

                                 tAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCCGCCTTTGGGt                                                        >  2:7521067/1‑93 (MQ=255)

                                  aaTCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTc                                                       <  1:1651665/93‑1 (MQ=255)

                                   aTCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCa                                                      >  1:8847346/1‑93 (MQ=255)

                                   aTCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCa                                                      <  1:3687723/93‑1 (MQ=255)

                                      aaaTGTTTACAGACACTATTAATAAGTGTGCGTCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCt                                                   >  1:5170467/1‑93 (MQ=255)

                                       aaTGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTc                                                  >  1:10046890/1‑93 (MQ=255)

                                       aaTGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCAGTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTc                                                  <  1:34958/93‑1 (MQ=255)

                                          gTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGc                                               >  2:2526011/1‑93 (MQ=255)

                                              aCAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATACCCCGCTCGGCTTTTGGGTCAGCTCCGCCATg                                           <  1:5049202/93‑1 (MQ=255)

                                                 gACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATggcg                                        <  2:9696638/93‑1 (MQ=255)

                                                 gACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATggcg                                        >  1:462103/1‑93 (MQ=255)

                                                  acacTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATggcgg                                       <  2:2637287/93‑1 (MQ=255)

                                                  acacTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATggcgg                                       >  1:5704796/1‑93 (MQ=255)

                                                  acacTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTACGCCATggcgg                                       >  1:1970364/1‑93 (MQ=255)

                                                   cacTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATggcggg                                      >  2:8848674/1‑93 (MQ=255)

                                                   cacTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATggcggg                                      <  1:4278980/93‑1 (MQ=255)

                                                   cacTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATggcggg                                      >  2:4573487/1‑93 (MQ=255)

                                                   cacTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATggcggg                                      <  2:584159/93‑1 (MQ=255)

                                                     cTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATggcgggcg                                    >  2:3262403/1‑93 (MQ=255)

                                                     cTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATggcgggcg                                    >  1:8082674/1‑93 (MQ=255)

                                                     cTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATggcgggcg                                    >  1:7490642/1‑93 (MQ=255)

                                                      tATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGgcgc                                   >  2:7952035/1‑93 (MQ=255)

                                                       aTTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGcgcg                                  <  1:2113754/93‑1 (MQ=255)

                                                         taataaGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGcgcggt                                >  1:2911082/1‑91 (MQ=255)

                                                         taataaGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGcgcgga                                >  2:647138/1‑91 (MQ=255)

                                                         taataaGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTa                                <  1:5525766/93‑1 (MQ=255)

                                                         taataaGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTa                                <  2:4093369/93‑1 (MQ=255)

                                                           ataaGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTAtg                              <  1:9033506/93‑1 (MQ=255)

                                                           ataaGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTAtg                              <  1:9316837/93‑1 (MQ=255)

                                                            taaGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTAtat                             >  1:359544/1‑91 (MQ=255)

                                                               gtgtGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTggg                          >  2:2757727/1‑93 (MQ=255)

                                                               gtgtGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTggg                          <  1:6022142/93‑1 (MQ=255)

                                                                tgtgCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGt                         <  1:1392218/93‑1 (MQ=255)

                                                                  tgCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGGGGGTCt                       >  1:4008909/1‑93 (MQ=255)

                                                                  tgCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGGATGTGGGTCt                       >  1:2659677/1‑93 (MQ=255)

                                                                   gCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCtt                      <  1:6298750/93‑1 (MQ=255)

                                                                   gCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCtt                      >  2:8082108/1‑93 (MQ=255)

                                                                   gCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCtt                      <  1:2187986/93‑1 (MQ=255)

                                                                       cTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGa                  >  2:1497197/1‑93 (MQ=255)

                                                                         aaCGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGatc                >  2:9351914/1‑93 (MQ=255)

                                                                          aCGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGGCTTGGGatca               >  2:2082425/1‑93 (MQ=255)

                                                                          aCGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGCATGTGGGTCTTGGGatct               >  2:5458097/1‑92 (MQ=255)

                                                                            gCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGatcatc             >  2:5711975/1‑93 (MQ=255)

                                                                            gCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGatcatc             <  1:9980414/93‑1 (MQ=255)

                                                                            gCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGatcatc             <  1:6564403/93‑1 (MQ=255)

                                                                            gCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGatcatc             >  2:2891113/1‑93 (MQ=255)

                                                                             cTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATcc            >  2:9826769/1‑93 (MQ=255)

                                                                             cTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATcc            >  1:2759068/1‑93 (MQ=255)

                                                                              tGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCt           >  2:3944630/1‑93 (MQ=255)

                                                                                 gcgcATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGGTCATCCTGAt        >  1:6395095/1‑93 (MQ=255)

                                                                                 gcgcATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGGATGTGGGGCTCGGGATCATCCTGAt        >  1:2345747/1‑93 (MQ=255)

                                                                                  cgcATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGAtt       >  1:5891296/1‑93 (MQ=255)

                                                                                   gcATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGAttt      >  2:9193185/1‑93 (MQ=255)

                                                                                    cATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTCTTGGGTCAGCTCCGACATGGCGGGCGCGTATGTGGGTCTTGAGATCATCCCGCtttt     >  1:5659937/1‑93 (MQ=255)

                                                                                      ttGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCa   >  1:9191935/1‑93 (MQ=255)

                                                                                      ttGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCa   >  1:8263293/1‑93 (MQ=255)

TTGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCACGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCAC  >  NC_000913/3494600‑3494779

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TTTTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCACGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTC  >  NC_000913/3494597‑3494783

TTTTTGGTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCG                                                                                               <  SRR4302540.5300364/94‑1 (MQ=60)

 TTTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGC                                                                                              >  SRR4302540.5410484/1‑94 (MQ=60)

 TTTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGC                                                                                              <  SRR4302540.5518217/94‑1 (MQ=60)

 TTTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGC                                                                                              <  SRR4302540.6562859/94‑1 (MQ=60)

  TTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCG                                                                                             <  SRR4302540.1369893/94‑1 (MQ=60)

  TTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCG                                                                                             >  SRR4302540.6720631/1‑94 (MQ=60)

  TTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCG                                                                                             >  SRR4302540.91609/1‑94 (MQ=60)

  TTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCG                                                                                             >  SRR4302540.7602064/1‑94 (MQ=60)

     GTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCT                                                                                          >  SRR4302540.10083291/1‑94 (MQ=60)

     GTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCT                                                                                          >  SRR4302540.5174530/1‑94 (MQ=60)

     GTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCT                                                                                          <  SRR4302540.4415370/94‑1 (MQ=60)

     GTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCT                                                                                          >  SRR4302540.9993042/1‑94 (MQ=60)

     GTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCT                                                                                          >  SRR4302540.2094722/1‑94 (MQ=60)

      TTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTG                                                                                         >  SRR4302540.9573827/1‑94 (MQ=60)

      TTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTG                                                                                         <  SRR4302540.2749014/94‑1 (MQ=60)

      TTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTG                                                                                         >  SRR4302540.9573832/1‑94 (MQ=60)

        TTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGATACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTC                                                                                       <  SRR4302540.5703863/94‑1 (MQ=60)

        TTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTC                                                                                       >  SRR4302540.7928443/1‑94 (MQ=60)

          ATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGG                                                                                     <  SRR4302540.5718070/94‑1 (MQ=60)

           TTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGC                                                                                    >  SRR4302540.2791655/1‑94 (MQ=60)

           TTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGC                                                                                    <  SRR4302540.4453070/94‑1 (MQ=60)

            TTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCA                                                                                   <  SRR4302540.9664828/94‑1 (MQ=60)

             TTTTGTTTTTATTTTTTAAATGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAA                                                                                  <  SRR4302540.7115288/94‑1 (MQ=60)

                 GTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAA                                                                              >  SRR4302540.768492/1‑94 (MQ=60)

                 GTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAA                                                                              >  SRR4302540.7708317/1‑94 (MQ=60)

                 GTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAA                                                                              >  SRR4302540.7708318/1‑94 (MQ=60)

                 GTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAA                                                                              <  SRR4302540.79565/94‑1 (MQ=60)

                 GTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAA                                                                              >  SRR4302540.8414425/1‑94 (MQ=60)

                 GTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAA                                                                              <  SRR4302540.5449517/94‑1 (MQ=60)

                  TTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAAC                                                                             >  SRR4302540.6309948/1‑94 (MQ=60)

                  TTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAAC                                                                             <  SRR4302540.1738428/94‑1 (MQ=60)

                  TTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAAC                                                                             >  SRR4302540.5098903/1‑94 (MQ=60)

                  TTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGCGCGGCTAACGCTGCGCGCATTGTGCGCCTGTCGGCAAATAAC                                                                             >  SRR4302540.9481774/1‑94 (MQ=60)

                    TTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCC                                                                           >  SRR4302540.9592867/1‑94 (MQ=60)

                    TTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCC                                                                           >  SRR4302540.478889/1‑94 (MQ=60)

                    TTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCC                                                                           >  SRR4302540.3688375/1‑94 (MQ=60)

                    TTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCC                                                                           >  SRR4302540.9175214/1‑94 (MQ=60)

                    TTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCC                                                                           <  SRR4302540.9625235/94‑1 (MQ=60)

                    TTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCC                                                                           >  SRR4302540.3688374/1‑94 (MQ=60)

                    TTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCC                                                                           <  SRR4302540.6771019/94‑1 (MQ=60)

                    TTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCC                                                                           <  SRR4302540.8409135/94‑1 (MQ=60)

                     TTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCG                                                                          >  SRR4302540.5052195/1‑94 (MQ=60)

                     TTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCG                                                                          <  SRR4302540.3770478/94‑1 (MQ=60)

                     TTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCG                                                                          >  SRR4302540.4791360/1‑94 (MQ=60)

                     TTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCG                                                                          <  SRR4302540.5090971/94‑1 (MQ=60)

                     TTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCG                                                                          >  SRR4302540.2116617/1‑94 (MQ=60)

                       ATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCT                                                                        >  SRR4302540.9325731/1‑94 (MQ=60)

                       ATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCT                                                                        >  SRR4302540.3219630/1‑94 (MQ=60)

                       ATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCT                                                                        >  SRR4302540.2460878/1‑94 (MQ=60)

                       ATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCT                                                                        <  SRR4302540.994433/94‑1 (MQ=60)

                         TTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCG                                                                      <  SRR4302540.9303625/94‑1 (MQ=60)

                          TTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGG                                                                     >  SRR4302540.6670709/1‑94 (MQ=60)

                           TTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGC                                                                    <  SRR4302540.3577961/94‑1 (MQ=60)

                           TTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGC                                                                    >  SRR4302540.3842482/1‑94 (MQ=60)

                            TTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCT                                                                   >  SRR4302540.1397968/1‑94 (MQ=60)

                            TTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCT                                                                   >  SRR4302540.4124062/1‑94 (MQ=60)

                            TTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCT                                                                   >  SRR4302540.9111003/1‑94 (MQ=60)

                            TTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCT                                                                   >  SRR4302540.974082/1‑94 (MQ=60)

                             TAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTT                                                                  >  SRR4302540.4887930/1‑94 (MQ=60)

                             TAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTT                                                                  >  SRR4302540.4887931/1‑94 (MQ=60)

                             TAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTT                                                                  >  SRR4302540.9549429/1‑94 (MQ=60)

                             TAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTT                                                                  >  SRR4302540.6866455/1‑94 (MQ=60)

                             TAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTT                                                                  >  SRR4302540.6866454/1‑94 (MQ=60)

                              AAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTT                                                                 <  SRR4302540.3223757/94‑1 (MQ=60)

                               AAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTT                                                                >  SRR4302540.6058840/1‑94 (MQ=60)

                                AGGATTATCAAATGTTTACAGACACTAATAATAAGTGTTCTGCTAATGCTGCGCGCATTTCTCGCCTGTCGGCAAATAACCCGCTttgtttttt                                                               >  SRR4302540.9037092/1‑85 (MQ=60)

                                AGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTG                                                               <  SRR4302540.572719/94‑1 (MQ=60)

                                AGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTG                                                               >  SRR4302540.5037949/1‑94 (MQ=60)

                                AGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTG                                                               >  SRR4302540.1555847/1‑94 (MQ=60)

                                 GGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGG                                                              >  SRR4302540.1168907/1‑94 (MQ=60)

                                 GGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGG                                                              <  SRR4302540.8713918/94‑1 (MQ=60)

                                 GGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGG                                                              >  SRR4302540.1074986/1‑94 (MQ=60)

                                  GATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGG                                                             <  SRR4302540.6641377/94‑1 (MQ=60)

                                  GATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGG                                                             <  SRR4302540.9866301/94‑1 (MQ=60)

                                  GATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGG                                                             <  SRR4302540.8505457/94‑1 (MQ=60)

                                   ATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTTGGCTTTTGGGT                                                            >  SRR4302540.5958773/1‑94 (MQ=60)

                                   ATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGT                                                            <  SRR4302540.7181118/94‑1 (MQ=60)

                                   ATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGT                                                            >  SRR4302540.2789800/1‑94 (MQ=60)

                                    TAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTC                                                           >  SRR4302540.8477774/1‑94 (MQ=60)

                                    TAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTC                                                           >  SRR4302540.3284937/1‑94 (MQ=60)

                                     AATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCA                                                          <  SRR4302540.1669673/94‑1 (MQ=60)

                                     AATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCA                                                          >  SRR4302540.8949694/1‑94 (MQ=60)

                                      ATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAG                                                         <  SRR4302540.3728016/94‑1 (MQ=60)

                                      ATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAG                                                         <  SRR4302540.3728015/94‑1 (MQ=60)

                                       TCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGC                                                        <  SRR4302540.635173/94‑1 (MQ=60)

                                        CAAATGTTTACAGACACTATTAATAAGTGTGCGTCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCT                                                       >  SRR4302540.5226724/1‑94 (MQ=60)

                                        CAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCT                                                       >  SRR4302540.6560393/1‑94 (MQ=60)

                                         AAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTC                                                      >  SRR4302540.10163681/1‑94 (MQ=60)

                                         AAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTC                                                      >  SRR4302540.7883457/1‑94 (MQ=60)

                                         AAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTC                                                      >  SRR4302540.3365320/1‑94 (MQ=60)

                                         AAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTC                                                      <  SRR4302540.448777/94‑1 (MQ=60)

                                          AATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCC                                                     >  SRR4302540.2524796/1‑94 (MQ=60)

                                          AATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCAGTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCC                                                     <  SRR4302540.35325/94‑1 (MQ=60)

                                           ATGTTTACAGACACTATTAATCAGTGTGCGGCTAAGGCTGAGCGCATTGCGCGCCTGTgggaaactaaccacgccgcctcttgggtacgctacg                                                    >  SRR4302540.2388877/1‑58 (MQ=47)

                                            TGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGC                                                   >  SRR4302540.6270003/1‑94 (MQ=60)

                                            TGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGC                                                   >  SRR4302540.6270004/1‑94 (MQ=60)

                                            TGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGC                                                   >  SRR4302540.2451081/1‑94 (MQ=60)

                                             GTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCC                                                  >  SRR4302540.5065399/1‑94 (MQ=60)

                                             GTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCC                                                  >  SRR4302540.8547880/1‑94 (MQ=60)

                                               TTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCAT                                                >  SRR4302540.6762645/1‑94 (MQ=60)

                                               TTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCAT                                                <  SRR4302540.5918566/94‑1 (MQ=60)

                                               TTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCAT                                                <  SRR4302540.220843/94‑1 (MQ=60)

                                                TACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATG                                               <  SRR4302540.1655344/94‑1 (MQ=60)

                                                TACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATG                                               >  SRR4302540.9671751/1‑94 (MQ=60)

                                                 ACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATACCCCGCTCGGCTTTTGGGTCAGCTCCGCCATGG                                              <  SRR4302540.5103800/94‑1 (MQ=60)

                                                  CAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCGTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGC                                             <  SRR4302540.4677573/94‑1 (MQ=60)

                                                  CAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGC                                             <  SRR4302540.8276739/94‑1 (MQ=60)

                                                  CAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGC                                             >  SRR4302540.9292645/1‑94 (MQ=60)

                                                  CAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGC                                             >  SRR4302540.9496882/1‑94 (MQ=60)

                                                   AGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCG                                            >  SRR4302540.467031/1‑94 (MQ=60)

                                                    GACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGG                                           >  SRR4302540.5767603/1‑94 (MQ=60)

                                                    GACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTACGCCATGGCGG                                           >  SRR4302540.1991755/1‑94 (MQ=60)

                                                     ACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGG                                          >  SRR4302540.8142590/1‑94 (MQ=60)

                                                     ACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGG                                          >  SRR4302540.2332880/1‑94 (MQ=60)

                                                      aacgATTAATAAGTGGGGGGCTAGCGCTGCGCGCTTTGCGCGGCTGTCGGCAAATATCCCGCCCGGCTTTTGGGTCAGCTCCGCCATGGCGGGC                                         <  SRR4302540.3919868/90‑1 (MQ=57)

                                                      CACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGC                                         <  SRR4302540.6967698/94‑1 (MQ=60)

                                                      CACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGC                                         <  SRR4302540.4325521/94‑1 (MQ=60)

                                                      CACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGC                                         <  SRR4302540.9359737/94‑1 (MQ=60)

                                                       ACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCG                                        >  SRR4302540.7574272/1‑94 (MQ=60)

                                                       ACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCG                                        >  SRR4302540.5904663/1‑94 (MQ=60)

                                                       ACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCG                                        <  SRR4302540.2217475/94‑1 (MQ=60)

                                                       ACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCG                                        >  SRR4302540.8176484/1‑94 (MQ=60)

                                                        CTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGC                                       >  SRR4302540.8685840/1‑94 (MQ=60)

                                                          ATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGT                                     <  SRR4302540.2136440/94‑1 (MQ=60)

                                                          ATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGT                                     >  SRR4302540.2208907/1‑94 (MQ=60)

                                                           TTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGgt                                    >  SRR4302540.2942905/1‑92 (MQ=60)

                                                            TAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTAT                                   <  SRR4302540.5586616/94‑1 (MQ=60)

                                                            TAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTAT                                   <  SRR4302540.9422815/94‑1 (MQ=60)

                                                            TAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTAT                                   <  SRR4302540.9309250/94‑1 (MQ=60)

                                                            TAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTAT                                   <  SRR4302540.609972/94‑1 (MQ=60)

                                                            TAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTAT                                   <  SRR4302540.4474677/94‑1 (MQ=60)

                                                            TAATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCCGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTAT                                   <  SRR4302540.4474678/94‑1 (MQ=60)

                                                            TAATAAGGGGGGGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTAT                                   <  SRR4302540.7428169/94‑1 (MQ=60)

                                                             AATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATG                                  <  SRR4302540.6344392/94‑1 (MQ=60)

                                                             AATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATG                                  >  SRR4302540.3928822/1‑94 (MQ=60)

                                                             AATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATG                                  <  SRR4302540.1845541/94‑1 (MQ=60)

                                                              ATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGT                                 <  SRR4302540.3129474/94‑1 (MQ=60)

                                                              ATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGT                                 >  SRR4302540.363239/1‑94 (MQ=60)

                                                              ATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGT                                 <  SRR4302540.9428019/94‑1 (MQ=60)

                                                              ATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGT                                 >  SRR4302540.646901/1‑94 (MQ=60)

                                                              ATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGT                                 <  SRR4302540.9141916/94‑1 (MQ=60)

                                                              ATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGT                                 >  SRR4302540.8177963/1‑94 (MQ=60)

                                                              ATAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATAT                                 >  SRR4302540.363240/1‑94 (MQ=60)

                                                               TAAGTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTG                                <  SRR4302540.946642/94‑1 (MQ=60)

                                                                  GTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGT                             <  SRR4302540.6088950/94‑1 (MQ=60)

                                                                  GTGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGC                             >  SRR4302540.840638/1‑94 (MQ=60)

                                                                   TGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTC                            <  SRR4302540.1407128/94‑1 (MQ=60)

                                                                   TGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTC                            <  SRR4302540.1407129/94‑1 (MQ=60)

                                                                   TGTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTC                            >  SRR4302540.3942609/1‑94 (MQ=60)

                                                                    GTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCT                           >  SRR4302540.6454619/1‑94 (MQ=60)

                                                                    GTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCT                           >  SRR4302540.4282376/1‑94 (MQ=60)

                                                                    GTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGGGGGTCT                           >  SRR4302540.4052072/1‑94 (MQ=60)

                                                                    GTGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGGATGTGGGTCT                           >  SRR4302540.2688534/1‑94 (MQ=60)

                                                                     TGCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTT                          >  SRR4302540.3050434/1‑94 (MQ=60)

                                                                      GCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTG                         <  SRR4302540.2211608/94‑1 (MQ=60)

                                                                      GCGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTG                         <  SRR4302540.6368893/94‑1 (MQ=60)

                                                                       CGGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGG                        >  SRR4302540.5279289/1‑94 (MQ=60)

                                                                        GGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGG                       >  SRR4302540.8413952/1‑94 (MQ=60)

                                                                        GGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGG                       >  SRR4302540.6391054/1‑94 (MQ=60)

                                                                        GGCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGG                       >  SRR4302540.4406862/1‑94 (MQ=60)

                                                                         GCTAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGA                      >  SRR4302540.5908637/1‑94 (MQ=60)

                                                                          CTAACGCTACGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGAC                     >  SRR4302540.1119401/1‑94 (MQ=60)

                                                                           TAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATC                    >  SRR4302540.7078649/1‑94 (MQ=60)

                                                                           TAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATC                    >  SRR4302540.5324955/1‑94 (MQ=60)

                                                                           TAACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCGTGGGATC                    >  SRR4302540.6468140/1‑94 (MQ=60)

                                                                           TAACGCTGCGCGCATTGCGCGCCCGTCGGCAAATAACCCGCTCGTCTTGTCGGTCATCTCCCCCATGGCCGCCGCGTATGGGGTGCTTGGGATC                    >  SRR4302540.8204900/1‑94 (MQ=25)

                                                                             ACGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCAT                  <  SRR4302540.1415500/94‑1 (MQ=60)

                                                                              CGCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATC                 >  SRR4302540.2691170/1‑94 (MQ=60)

                                                                               GCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCC                <  SRR4302540.10096792/94‑1 (MQ=60)

                                                                               GCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCC                >  SRR4302540.2788876/1‑94 (MQ=60)

                                                                               GCTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCC                <  SRR4302540.6637155/94‑1 (MQ=60)

                                                                                CTGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCT               >  SRR4302540.5195490/1‑94 (MQ=60)

                                                                                 TGCGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTG              <  SRR4302540.3845131/94‑1 (MQ=60)

                                                                                   CGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGGTCATCCTGAT            >  SRR4302540.6466281/1‑94 (MQ=60)

                                                                                   CGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGAT            <  SRR4302540.9764061/94‑1 (MQ=60)

                                                                                   CGCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGGATGTGGGGCTCGGGATCATCCTGAT            >  SRR4302540.2371015/1‑94 (MQ=60)

                                                                                    GCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATT           >  SRR4302540.214477/1‑94 (MQ=60)

                                                                                    GCGCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATT           >  SRR4302540.5956379/1‑94 (MQ=60)

                                                                                      GCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTT         >  SRR4302540.5722258/1‑94 (MQ=60)

                                                                                      GCATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTCTTGGGTCAGCTCCGACATGGCGGGCGCGTATGTGGGTCTTGAGATCATCCCGCTTTT         >  SRR4302540.5722257/1‑94 (MQ=60)

                                                                                       CATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTC        >  SRR4302540.8158207/1‑94 (MQ=60)

                                                                                        ATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCA       >  SRR4302540.9302181/1‑94 (MQ=60)

                                                                                        ATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCA       >  SRR4302540.8359314/1‑94 (MQ=60)

                                                                                        ATTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGGGGGTCTTGGGATCATCCTGATTTTCC       >  SRR4302540.8359313/1‑94 (MQ=60)

                                                                                         TTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCAC      <  SRR4302540.3807911/94‑1 (MQ=60)

                                                                                         TTGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCAC      <  SRR4302540.8991485/94‑1 (MQ=60)

                                                                                          TGCGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACG     >  SRR4302540.3675631/1‑94 (MQ=60)

                                                                                            CGCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCT   <  SRR4302540.6735665/94‑1 (MQ=60)

                                                                                             GCGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTC  >  SRR4302540.9910881/1‑94 (MQ=60)

TTTTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCACGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTC  >  NC_000913/3494597‑3494783

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`