Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,509,958 Δ1 bp intergenic (‑195/+314) yhfZ ← / ← trpS hypothetical protein/tryptophan tRNA synthetase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,509,9560T.99.8% 2363.8 / ‑3.4 521intergenic (‑193/+316)yhfZ/trpShypothetical protein/tryptophan tRNA synthetase
Reads supporting (aligned to +/- strand):  ref base T (1/0);  major base . (199/319);  minor base G (1/0);  total (202/319)
Fisher's exact test for biased strand distribution p-value = 3.85e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 572 total aligned reads displayed.

CGGCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCCTTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAG  >  NC_000913/3509864‑3510044
                                                                                            |                                                                                        
   cattcattTGCCATCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCcttct                                                                                       <  1:832659/93‑3 (MQ=255)
   cattcattTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCACCAAATAACGGGCAAGCGTCGTGATGACGAAGCcttct                                                                                       >  1:522266/1‑91 (MQ=255)
   cattcattTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCcttct                                                                                       >  2:8806638/1‑91 (MQ=255)
      tcattTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCtttt                                                                                   >  2:7765923/1‑93 (MQ=255)
       cattTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCttttt                                                                                  <  1:9063750/93‑1 (MQ=255)
       cattTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCttttt                                                                                  >  1:9195728/1‑93 (MQ=255)
       cattTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCttttt                                                                                  <  1:9316305/93‑1 (MQ=255)
        attTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCtttttt                                                                                 >  2:2961432/1‑93 (MQ=255)
         tttGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTg                                                                                >  2:9340570/1‑93 (MQ=255)
           tGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGAt                                                                              >  2:5952107/1‑93 (MQ=255)
            gCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATa                                                                             <  1:29803/93‑1 (MQ=255)
             ccAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATaa                                                                            >  1:7340242/1‑93 (MQ=255)
             ccAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATaa                                                                            <  2:354355/93‑1 (MQ=255)
             ccAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATaa                                                                            <  1:7475438/93‑1 (MQ=255)
              cAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATaaa                                                                           >  1:396700/1‑93 (MQ=255)
              cAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATaaa                                                                           >  2:4073979/1‑93 (MQ=255)
               aGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAAc                                                                          <  1:5416363/93‑1 (MQ=255)
                gCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACg                                                                         >  1:8592555/1‑93 (MQ=255)
                 cTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGt                                                                        >  1:2535367/1‑93 (MQ=255)
                  tCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCACCAAAAAACGGGCCAGCGTCGTGATGACGCCGCCTCT‑TTTTTTATTAAACGtt                                                                       >  1:6136500/1‑93 (MQ=255)
                  tCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATCAACGtt                                                                       >  2:892802/1‑93 (MQ=255)
                  tCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGtt                                                                       <  1:9518311/93‑1 (MQ=255)
                  tCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGtt                                                                       >  1:2671174/1‑93 (MQ=255)
                   cATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTc                                                                      <  1:8016738/93‑1 (MQ=255)
                    aTCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCg                                                                     >  1:4351207/1‑93 (MQ=255)
                    aTCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCg                                                                     >  2:6750194/1‑93 (MQ=255)
                     tCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGa                                                                    >  1:3219116/1‑93 (MQ=255)
                      cTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGAc                                                                   <  2:1364957/93‑1 (MQ=255)
                        aTGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCCAccc                                                                 >  2:2063496/1‑91 (MQ=255)
                         tGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCa                                                                <  2:4219157/93‑1 (MQ=255)
                             tttCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCataat                                                            <  2:7657439/93‑1 (MQ=255)
                             tttCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCataat                                                            <  1:6718948/93‑1 (MQ=255)
                              ttCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCataata                                                           >  2:5849843/1‑93 (MQ=255)
                              ttCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCataata                                                           >  2:6572994/1‑93 (MQ=255)
                                cAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAAAGTTCGACGCATAATaaa                                                         >  1:3735406/1‑93 (MQ=255)
                                 aaTCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAAt                                                        <  2:1069542/93‑1 (MQ=255)
                                      aTTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCa                                                   <  1:6901955/93‑1 (MQ=255)
                                      aTTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAAACTTTGACGCATAATAAATTTTct                                                   >  2:3783241/1‑92 (MQ=255)
                                       ttACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAg                                                  <  1:8218965/93‑1 (MQ=255)
                                         aCCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTa                                                <  1:5506939/93‑1 (MQ=255)
                                            gCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAt                                             <  2:1494098/93‑1 (MQ=255)
                                            ccACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAATCGTTCGACGCATAATAAATTTTCAGTAAAt                                             <  2:7003158/92‑1 (MQ=255)
                                             cACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAtt                                            <  2:3224554/93‑1 (MQ=255)
                                             cACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAtt                                            <  2:4676526/93‑1 (MQ=255)
                                             cACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAtt                                            <  2:2226108/93‑1 (MQ=255)
                                              aCTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTg                                           >  2:1198941/1‑93 (MQ=255)
                                               cTTTTCACCCAACAAATAATGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGa                                          >  1:4145404/1‑93 (MQ=255)
                                               cTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGa                                          <  2:1698757/93‑1 (MQ=255)
                                                ttttCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGaa                                         >  2:7385184/1‑93 (MQ=255)
                                                 tttCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAat                                        <  2:5663943/93‑1 (MQ=255)
                                                 tttCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAat                                        <  1:4566232/93‑1 (MQ=255)
                                                  ttCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAata                                       <  1:2062164/93‑1 (MQ=255)
                                                    cACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATAtt                                     <  2:2842932/93‑1 (MQ=255)
                                                    cACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATAtt                                     <  2:4367049/93‑1 (MQ=255)
                                                    cACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATAtt                                     <  1:879421/93‑1 (MQ=255)
                                                     aCCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATAttt                                    >  1:8947699/1‑93 (MQ=255)
                                                      cccAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTta                                   <  2:8498687/93‑1 (MQ=255)
                                                      cccAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTta                                   <  2:5169789/93‑1 (MQ=255)
                                                       ccAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTtat                                  <  2:1828177/93‑1 (MQ=255)
                                                       ccAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTtaa                                  <  1:1799266/93‑2 (MQ=255)
                                                         aacaaATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTatat                                <  1:7056231/93‑1 (MQ=255)
                                                          acaaATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATc                               <  1:6260697/93‑1 (MQ=255)
                                                            aaaTAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCtt                             <  1:1530055/93‑1 (MQ=255)
                                                             aaTAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTc                            <  1:6341672/93‑1 (MQ=255)
                                                             aaTAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTc                            >  1:4968792/1‑93 (MQ=255)
                                                              aTAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCa                           >  1:1132432/1‑93 (MQ=255)
                                                              aTAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCa                           <  2:2436523/93‑1 (MQ=255)
                                                              aTAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCa                           <  2:4974892/93‑1 (MQ=255)
                                                                  cGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGaa                       <  2:9226108/93‑1 (MQ=255)
                                                                  cGGGCCAGCGTCGTGATGACGACGCC‑TTCTTGTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGaa                       <  1:7881664/93‑1 (MQ=255)
                                                                   gggCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAAt                      <  2:7224772/93‑1 (MQ=255)
                                                                     gCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAAttt                    <  2:8189893/93‑1 (MQ=255)
                                                                      ccAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTg                   >  1:5947368/1‑93 (MQ=255)
                                                                      ccAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTg                   >  2:5545586/1‑93 (MQ=255)
                                                                       cAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGa                  >  1:7772701/1‑93 (MQ=255)
                                                                       cAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGa                  >  2:6911126/1‑93 (MQ=255)
                                                                        aGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGaa                 <  1:84624/93‑1 (MQ=255)
                                                                         gCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAg                <  1:976936/93‑1 (MQ=255)
                                                                         gCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAg                <  1:2310045/93‑1 (MQ=255)
                                                                         gCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAg                >  2:6366043/1‑93 (MQ=255)
                                                                         gCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAg                >  2:6174817/1‑93 (MQ=255)
                                                                         gCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAg                >  2:539517/1‑93 (MQ=255)
                                                                         gCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAg                >  1:6195646/1‑93 (MQ=255)
                                                                         gCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAg                >  1:6549012/1‑93 (MQ=255)
                                                                          cgtcgtGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGa               <  1:3422420/93‑1 (MQ=255)
                                                                           gtcgtGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGAt              <  2:4573035/93‑1 (MQ=255)
                                                                            tcgtGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATa             <  1:285698/93‑1 (MQ=255)
                                                                            tcgtGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATa             <  1:10006264/93‑1 (MQ=255)
                                                                             tgtGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATaa            <  1:4764453/92‑1 (MQ=255)
                                                                             cgtGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATaa            <  1:10047374/93‑1 (MQ=255)
                                                                              gtGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAg           >  2:9751843/1‑93 (MQ=255)
                                                                               tgatgaCGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAgg          <  1:2565326/93‑1 (MQ=255)
                                                                                gatgaCGACGCC‑TTCTTTTTTGATAACCGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGgc         <  1:9895859/93‑1 (MQ=255)
                                                                                  tgaCGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGgcgc       >  1:3625535/1‑93 (MQ=255)
                                                                                   gacgacGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATACATTTTCAGTACATTGAATATTTATATCTTCAGGACTTTGAAGATAAGgcgaa      >  1:1392060/1‑91 (MQ=255)
                                                                                   gacgacGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCa      <  2:8657163/93‑1 (MQ=255)
                                                                                    acgacgCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCaa     <  2:8074159/93‑1 (MQ=255)
                                                                                       acgCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAg  <  2:3957136/93‑1 (MQ=255)
                                                                                       acgCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAg  <  1:5753138/93‑1 (MQ=255)
                                                                                       acgCC‑TTCTTTTTTGAGAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAg  >  2:9558867/1‑93 (MQ=255)
                                                                                            |                                                                                        
CGGCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCCTTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAG  >  NC_000913/3509864‑3510044

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 320 total aligned reads displayed.
GGCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCCTTTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGATG  >  NC_000913/3509865‑3510051
                                                                                             |                                                                                              
  CATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTT                                                                                             <  SRR4302540.972940/94‑1 (MQ=60)
  CATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTT                                                                                             <  SRR4302540.6102826/94‑1 (MQ=60)
  CATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTT                                                                                             >  SRR4302540.6445706/1‑94 (MQ=60)
   ATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTT                                                                                            >  SRR4302540.7973793/1‑94 (MQ=60)
   ATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTT                                                                                            >  SRR4302540.9190202/1‑94 (MQ=60)
   ATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTT                                                                                            >  SRR4302540.2359061/1‑94 (MQ=60)
    TTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTT                                                                                           >  SRR4302540.4418744/1‑94 (MQ=60)
     TCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTT                                                                                          >  SRR4302540.8197667/1‑94 (MQ=60)
     TCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTT                                                                                          >  SRR4302540.8238387/1‑94 (MQ=60)
     TCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTT                                                                                          >  SRR4302540.9306033/1‑94 (MQ=60)
     TCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTT                                                                                          <  SRR4302540.2639168/94‑1 (MQ=60)
      CATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTT                                                                                         <  SRR4302540.9172577/94‑1 (MQ=60)
       ATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTG                                                                                        >  SRR4302540.4088952/1‑94 (MQ=60)
       ATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTG                                                                                        >  SRR4302540.2832937/1‑94 (MQ=60)
       ATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTG                                                                                        >  SRR4302540.3808844/1‑94 (MQ=60)
         TTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑T                                                                                     <  SRR4302540.5666954/94‑1 (MQ=60)
         TTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑T                                                                                     <  SRR4302540.1091728/94‑1 (MQ=60)
         TTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑T                                                                                     >  SRR4302540.4142451/1‑94 (MQ=60)
          TGCCAGCTCATCTATGGTTTTCAATCGATTACCGCCCTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TA                                                                                    >  SRR4302540.2898726/1‑94 (MQ=60)
          TGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TA                                                                                    <  SRR4302540.3965515/94‑1 (MQ=60)
          TGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TA                                                                                    >  SRR4302540.2898724/1‑94 (MQ=60)
          TGCCAGCTCATCTATGGTTTTCAATCGATTACCGCAATTTTCACCCAACAAATAACGGGCAAGCGTCGTGATGACAACGCC‑TTCTTTTTTGA‑TA                                                                                    >  SRR4302540.2608196/1‑94 (MQ=60)
           GCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAA                                                                                   >  SRR4302540.7839597/1‑94 (MQ=60)
           GCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAA                                                                                   >  SRR4302540.7422150/1‑94 (MQ=60)
            CCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAA                                                                                  <  SRR4302540.5835104/94‑1 (MQ=60)
            CCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAA                                                                                  <  SRR4302540.7558859/94‑1 (MQ=60)
            CCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAA                                                                                  >  SRR4302540.9068647/1‑94 (MQ=60)
             CAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAAC                                                                                 <  SRR4302540.3729303/94‑1 (MQ=60)
              AGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACG                                                                                >  SRR4302540.8692443/1‑94 (MQ=60)
              AGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACG                                                                                <  SRR4302540.785139/94‑1 (MQ=60)
               GCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGT                                                                               <  SRR4302540.6338797/94‑1 (MQ=60)
               GCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGT                                                                               >  SRR4302540.4726952/1‑94 (MQ=60)
               GCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGT                                                                               >  SRR4302540.2562708/1‑94 (MQ=60)
                CTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCACCAAAAAACGGGCCAGCGTCGTGATGACGCCGCC‑‑TCTTTTTTTATTAAACGTT                                                                              >  SRR4302540.6204846/1‑94 (MQ=60)
                CTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTT                                                                              <  SRR4302540.5152506/94‑1 (MQ=60)
                CTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTT                                                                              <  SRR4302540.7570465/94‑1 (MQ=60)
                CTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTT                                                                              <  SRR4302540.1926422/94‑1 (MQ=60)
                 TCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTC                                                                             <  SRR4302540.1128859/94‑1 (MQ=60)
                 TCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTC                                                                             <  SRR4302540.6930701/94‑1 (MQ=60)
                 TCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTC                                                                             >  SRR4302540.5546961/1‑94 (MQ=60)
                 TCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTC                                                                             <  SRR4302540.6568390/94‑1 (MQ=60)
                 TCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTC                                                                             <  SRR4302540.342237/94‑1 (MQ=60)
                  CATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCG                                                                            <  SRR4302540.3245782/94‑1 (MQ=60)
                  CATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCG                                                                            <  SRR4302540.8109981/94‑1 (MQ=60)
                  CATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTAG                                                                            <  SRR4302540.6622553/94‑1 (MQ=60)
                   ATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGA                                                                           <  SRR4302540.8471982/94‑1 (MQ=60)
                   ATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGA                                                                           >  SRR4302540.3163706/1‑94 (MQ=60)
                   ATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGA                                                                           >  SRR4302540.3254083/1‑94 (MQ=60)
                    TCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGAC                                                                          <  SRR4302540.7070493/94‑1 (MQ=60)
                     CTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACG                                                                         <  SRR4302540.4381051/94‑1 (MQ=60)
                     CTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACG                                                                         >  SRR4302540.4558193/1‑94 (MQ=60)
                     CTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGAAGACGCC‑TTCTTTTTTTA‑TAAAAGTTCGACC                                                                         >  SRR4302540.7539524/1‑94 (MQ=60)
                      TATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGC                                                                        >  SRR4302540.9732404/1‑94 (MQ=60)
                      TATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGC                                                                        <  SRR4302540.8657797/94‑1 (MQ=60)
                        TGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCAT                                                                      <  SRR4302540.8403368/94‑1 (MQ=60)
                        TGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCAT                                                                      >  SRR4302540.2591526/1‑94 (MQ=60)
                         GGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATA                                                                     <  SRR4302540.1027573/94‑1 (MQ=60)
                           TTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAAT                                                                   <  SRR4302540.7902781/94‑1 (MQ=60)
                           TTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAAT                                                                   <  SRR4302540.9474344/94‑1 (MQ=60)
                           TTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAAT                                                                   <  SRR4302540.7331638/94‑1 (MQ=60)
                           TTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAAT                                                                   <  SRR4302540.9250921/94‑1 (MQ=60)
                            TTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATA                                                                  <  SRR4302540.9629054/94‑1 (MQ=60)
                            TTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATA                                                                  <  SRR4302540.8865679/94‑1 (MQ=60)
                            TTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATA                                                                  <  SRR4302540.5514329/94‑1 (MQ=60)
                            TTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACG‑CGTTCTTTTTTGA‑TAAACGTTCGACGCATAATA                                                                  >  SRR4302540.3469193/1‑94 (MQ=60)
                              TCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAA                                                                >  SRR4302540.6265521/1‑94 (MQ=60)
                              TCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAAAGTTCGACGCATAATAAA                                                                >  SRR4302540.3776163/1‑94 (MQ=60)
                               CAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAAT                                                               <  SRR4302540.8920232/94‑1 (MQ=60)
                               CAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAAT                                                               <  SRR4302540.9975972/94‑1 (MQ=60)
                                AATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATT                                                              <  SRR4302540.806404/94‑1 (MQ=60)
                                 ATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTT                                                             <  SRR4302540.4303703/94‑1 (MQ=60)
                                 ATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTT                                                             <  SRR4302540.2534753/94‑1 (MQ=60)
                                    GATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCA                                                          >  SRR4302540.2663204/1‑94 (MQ=60)
                                    GATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCA                                                          >  SRR4302540.9238095/1‑94 (MQ=60)
                                    GATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCA                                                          >  SRR4302540.5276347/1‑94 (MQ=60)
                                    GATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCA                                                          >  SRR4302540.1801989/1‑94 (MQ=60)
                                    GATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCA                                                          <  SRR4302540.687083/94‑1 (MQ=60)
                                    GATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCA                                                          >  SRR4302540.2426198/1‑94 (MQ=60)
                                     ATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAG                                                         <  SRR4302540.8994341/94‑1 (MQ=60)
                                     ATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAG                                                         >  SRR4302540.10148027/1‑94 (MQ=60)
                                     ATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAG                                                         <  SRR4302540.6978671/94‑1 (MQ=60)
                                     ATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAG                                                         >  SRR4302540.5846182/1‑94 (MQ=60)
                                     ATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAG                                                         >  SRR4302540.10148026/1‑94 (MQ=60)
                                     ATTACCGCACGTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAG                                                         <  SRR4302540.3988204/94‑1 (MQ=60)
                                      TTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGT                                                        <  SRR4302540.8314494/94‑1 (MQ=60)
                                      TTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGT                                                        <  SRR4302540.3759697/94‑1 (MQ=60)
                                      TTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGT                                                        <  SRR4302540.6691243/94‑1 (MQ=60)
                                       TACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTA                                                       >  SRR4302540.8565424/1‑94 (MQ=60)
                                        ACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAA                                                      >  SRR4302540.8356739/1‑94 (MQ=60)
                                          CGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAAT                                                    <  SRR4302540.4737470/94‑1 (MQ=60)
                                          CGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAAT                                                    <  SRR4302540.5491656/94‑1 (MQ=60)
                                          CGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAAT                                                    >  SRR4302540.2759605/1‑94 (MQ=60)
                                           GCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATT                                                   <  SRR4302540.3632548/94‑1 (MQ=60)
                                            CACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTG                                                  >  SRR4302540.5521032/1‑94 (MQ=60)
                                             ACTTTTCACCCAACAAATAATGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGA                                                 >  SRR4302540.4190267/1‑94 (MQ=60)
                                             ACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGA                                                 <  SRR4302540.3350207/94‑1 (MQ=60)
                                              CTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAA                                                <  SRR4302540.9453252/94‑1 (MQ=60)
                                               TTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAAT                                               <  SRR4302540.5221625/94‑1 (MQ=60)
                                               TTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAAT                                               <  SRR4302540.5574187/94‑1 (MQ=60)
                                                TTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATA                                              <  SRR4302540.4615537/94‑1 (MQ=60)
                                                TTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATA                                              <  SRR4302540.8514326/94‑1 (MQ=60)
                                                TTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATA                                              <  SRR4302540.2082602/94‑1 (MQ=60)
                                                TTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATA                                              <  SRR4302540.2985991/94‑1 (MQ=60)
                                                 TTCTCCCAACAAATAACGGGCCATCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATAT                                             <  SRR4302540.6082373/94‑1 (MQ=60)
                                                 TTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATAT                                             <  SRR4302540.2084354/94‑1 (MQ=60)
                                                 TTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATAT                                             <  SRR4302540.8829261/94‑1 (MQ=60)
                                                  TCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATT                                            >  SRR4302540.2325540/1‑94 (MQ=60)
                                                  TCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATT                                            <  SRR4302540.9130709/94‑1 (MQ=60)
                                                   CACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTT                                           <  SRR4302540.888748/94‑1 (MQ=60)
                                                   CACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTT                                           >  SRR4302540.9053021/1‑94 (MQ=60)
                                                    ACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTA                                          >  SRR4302540.4932681/1‑94 (MQ=60)
                                                     CCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTAT                                         <  SRR4302540.1616350/94‑1 (MQ=60)
                                                     CCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTAT                                         <  SRR4302540.8078292/94‑1 (MQ=60)
                                                     CCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTAT                                         >  SRR4302540.7030924/1‑94 (MQ=60)
                                                     CCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTAT                                         <  SRR4302540.3681820/94‑1 (MQ=60)
                                                     CCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTAT                                         <  SRR4302540.1537937/94‑1 (MQ=60)
                                                     CCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTAT                                         <  SRR4302540.5671656/94‑1 (MQ=60)
                                                      CCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTGTA                                        <  SRR4302540.2258929/94‑1 (MQ=60)
                                                      CCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATA                                        <  SRR4302540.1818854/94‑1 (MQ=60)
                                                      CCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATA                                        >  SRR4302540.7899898/1‑94 (MQ=60)
                                                      CCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATA                                        <  SRR4302540.9419721/94‑1 (MQ=60)
                                                      CCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATA                                        <  SRR4302540.6447564/94‑1 (MQ=60)
                                                       CAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATAT                                       <  SRR4302540.9576448/94‑1 (MQ=60)
                                                       CAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATAT                                       >  SRR4302540.9322038/1‑94 (MQ=60)
                                                       CAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATAT                                       <  SRR4302540.5349561/94‑1 (MQ=60)
                                                       CAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATAT                                       <  SRR4302540.1371155/94‑1 (MQ=60)
                                                       CAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATAT                                       <  SRR4302540.8452070/94‑1 (MQ=60)
                                                         ACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCT                                     <  SRR4302540.6330352/94‑1 (MQ=60)
                                                         ACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCT                                     <  SRR4302540.9915874/94‑1 (MQ=60)
                                                          CAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCCGTAAATTGAATATTTATCTCTT                                    >  SRR4302540.6265752/1‑94 (MQ=60)
                                                          CAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTT                                    >  SRR4302540.8404280/1‑94 (MQ=60)
                                                           AAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTC                                   >  SRR4302540.5022553/1‑94 (MQ=60)
                                                           AAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTC                                   <  SRR4302540.1546996/94‑1 (MQ=60)
                                                            AATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCA                                  <  SRR4302540.6412290/94‑1 (MQ=60)
                                                            AATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCA                                  <  SRR4302540.7921580/94‑1 (MQ=60)
                                                            AATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCA                                  <  SRR4302540.9910565/94‑1 (MQ=60)
                                                            AATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCA                                  >  SRR4302540.1144225/1‑94 (MQ=60)
                                                            AATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCA                                  >  SRR4302540.3215056/1‑94 (MQ=60)
                                                             ATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAG                                 >  SRR4302540.4759006/1‑94 (MQ=60)
                                                                ACGGGCCAGCGTCGTGATGACGACTCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAA                              <  SRR4302540.6330912/94‑1 (MQ=60)
                                                                 CGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAAT                             <  SRR4302540.1320816/94‑1 (MQ=60)
                                                                 CGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAAT                             >  SRR4302540.7107725/1‑94 (MQ=60)
                                                                 CGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAAT                             >  SRR4302540.3484477/1‑94 (MQ=60)
                                                                 CGGGCCAGCGTCGTGATGACGACGCC‑TTCTTGTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAAT                             <  SRR4302540.7973695/94‑1 (MQ=60)
                                                                  gggcgcgtGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATT                            <  SRR4302540.3186252/86‑1 (MQ=60)
                                                                    GCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTG                          <  SRR4302540.10035182/94‑1 (MQ=60)
                                                                    GCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTG                          <  SRR4302540.9395097/94‑1 (MQ=60)
                                                                    GCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTG                          >  SRR4302540.6013122/1‑94 (MQ=60)
                                                                     CCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGA                         <  SRR4302540.7452611/94‑1 (MQ=60)
                                                                       AGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAG                       <  SRR4302540.5894505/94‑1 (MQ=60)
                                                                       AGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAG                       >  SRR4302540.4424104/1‑94 (MQ=60)
                                                                       AGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAG                       >  SRR4302540.72497/1‑94 (MQ=60)
                                                                       AGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAG                       >  SRR4302540.6264622/1‑94 (MQ=60)
                                                                       AGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAG                       >  SRR4302540.632653/1‑94 (MQ=60)
                                                                       AGCGTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAG                       >  SRR4302540.3424881/1‑94 (MQ=60)
                                                                          GTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATA                    >  SRR4302540.9660727/1‑94 (MQ=60)
                                                                          GTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATA                    >  SRR4302540.5390480/1‑94 (MQ=60)
                                                                          GTCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATA                    <  SRR4302540.270981/94‑1 (MQ=60)
                                                                           TCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAA                   <  SRR4302540.1742701/94‑1 (MQ=60)
                                                                           TCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAA                   <  SRR4302540.2571699/94‑1 (MQ=60)
                                                                           TCGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAA                   <  SRR4302540.10122804/94‑1 (MQ=60)
                                                                            TGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAG                  <  SRR4302540.4815308/94‑1 (MQ=60)
                                                                            CGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAG                  <  SRR4302540.5390490/94‑1 (MQ=60)
                                                                            CGTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAG                  <  SRR4302540.10164169/94‑1 (MQ=60)
                                                                             GTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGG                 <  SRR4302540.6770710/94‑1 (MQ=60)
                                                                             GTGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGG                 <  SRR4302540.8810981/94‑1 (MQ=60)
                                                                              TGATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGC                <  SRR4302540.2592983/94‑1 (MQ=60)
                                                                               GATGACGACGCC‑TTCTTTTTTGA‑TAACCGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCG               <  SRR4302540.10011425/94‑1 (MQ=60)
                                                                               GATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCG               <  SRR4302540.7478264/94‑1 (MQ=60)
                                                                               GATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCG               >  SRR4302540.6025529/1‑94 (MQ=60)
                                                                                ATGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGC              >  SRR4302540.9022151/1‑94 (MQ=60)
                                                                                 TGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATACATTTTCAGTACATTGAATATTTATATCTTCAGGACTTTGAAGATAAGGCGAA             >  SRR4302540.1406968/1‑94 (MQ=60)
                                                                                 TGACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCA             >  SRR4302540.1406970/1‑94 (MQ=60)
                                                                                  GACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAA            >  SRR4302540.2257645/1‑94 (MQ=60)
                                                                                  GACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAA            >  SRR4302540.9436523/1‑94 (MQ=60)
                                                                                   ACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAAC           <  SRR4302540.8306103/94‑1 (MQ=60)
                                                                                   ACGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATACCTTCAGGAATTTGAAGATAAGGCGCAAC           >  SRR4302540.5004076/1‑94 (MQ=60)
                                                                                    CGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACA          >  SRR4302540.6254400/1‑94 (MQ=60)
                                                                                    CGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACA          <  SRR4302540.6829796/94‑1 (MQ=60)
                                                                                    CGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACA          >  SRR4302540.2579158/1‑94 (MQ=60)
                                                                                    CGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACA          >  SRR4302540.2998176/1‑94 (MQ=60)
                                                                                    CGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACA          >  SRR4302540.6254401/1‑94 (MQ=60)
                                                                                    CGACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACA          >  SRR4302540.8647108/1‑94 (MQ=60)
                                                                                     GACGCC‑TTCTTTTTTGA‑TAAACGTTCGACGAATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAG         <  SRR4302540.4207443/94‑1 (MQ=60)
                                                                                       CGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCG       >  SRR4302540.7075205/1‑94 (MQ=60)
                                                                                       CGCC‑TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCG       >  SRR4302540.10029271/1‑94 (MQ=60)
                                                                                          CCTTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAG     >  SRR4302540.662153/1‑94 (MQ=60)
                                                                                          CCTTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAG     <  SRR4302540.18903/94‑1 (MQ=60)
                                                                                          CCTTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAG     <  SRR4302540.4069009/94‑1 (MQ=60)
                                                                                          CCTTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAG     <  SRR4302540.516723/94‑1 (MQ=60)
                                                                                           CTTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGA    >  SRR4302540.9328292/1‑94 (MQ=60)
                                                                                            TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGAT   <  SRR4302540.7185549/94‑1 (MQ=60)
                                                                                            TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGAT   <  SRR4302540.4471999/94‑1 (MQ=60)
                                                                                            TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGAT   <  SRR4302540.7185550/94‑1 (MQ=60)
                                                                                            TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGAT   <  SRR4302540.10065509/94‑1 (MQ=60)
                                                                                            TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGAT   <  SRR4302540.135559/94‑1 (MQ=60)
                                                                                            TTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGAT   <  SRR4302540.5468642/94‑1 (MQ=60)
                                                                                             TCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGATG  >  SRR4302540.8560262/1‑94 (MQ=60)
                                                                                             TCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGATG  <  SRR4302540.2529956/94‑1 (MQ=60)
                                                                                             TCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGATG  <  SRR4302540.4253748/94‑1 (MQ=60)
                                                                                             |                                                                                              
GGCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCCTTTCTTTTTTGA‑TAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGATG  >  NC_000913/3509865‑3510051

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑