Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,533,160	A→G	L116P (CTG→CCG)	envZ ←	protein histidine kinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,533,160	0	A	G	100.0%	1049.8 / NA	325	L116P (CTG→CCG)	envZ	protein histidine kinase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (161/164); total (161/164)

Only 100 of 338 total aligned reads displayed.

CGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGA  >  NC_000913/3533070‑3533248

cgTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGt                                                                                        <  1:2574470/93‑1 (MQ=255)

   tcccAGATATTGGGCGACAGCCAGGTTTTCAGTCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTtgc                                                                                     <  2:91011/92‑1 (MQ=255)

   aCCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTtgc                                                                                     <  1:8391614/93‑1 (MQ=255)

   aCCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTtgc                                                                                     <  1:7066611/93‑1 (MQ=255)

   aCCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTtgc                                                                                     >  2:6951432/1‑93 (MQ=255)

   aCCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTtgc                                                                                     >  1:2862372/1‑93 (MQ=255)

     ccAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCACCGCGCACTTCCGTCGGGCCGCCCGGTtgctg                                                                                   >  2:7611214/1‑93 (MQ=255)

     ccAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTtgctg                                                                                   >  2:2391712/1‑93 (MQ=255)

     ccAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTtgctg                                                                                   <  2:9828676/93‑1 (MQ=255)

      cAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTtgctgc                                                                                  <  1:6629044/93‑1 (MQ=255)

      cAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGAGCACTTCCGTCGGGCCGCCCGGTtgctgc                                                                                  >  2:5198686/1‑93 (MQ=255)

        gATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTgcgc                                                                                <  2:2889267/93‑1 (MQ=255)

        gATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTgcgc                                                                                >  2:124505/1‑93 (MQ=255)

        gATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTgcgc                                                                                >  2:5631753/1‑93 (MQ=255)

        gATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTgcgc                                                                                >  1:2312026/1‑93 (MQ=255)

         atatTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGcc                                                                               <  2:4877625/93‑1 (MQ=255)

         atatTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGcc                                                                               >  2:2633735/1‑93 (MQ=255)

         atatTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGcc                                                                               <  1:6835319/93‑1 (MQ=255)

          tatTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCa                                                                              <  1:500608/93‑1 (MQ=255)

          tatTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCa                                                                              <  1:2020353/93‑1 (MQ=255)

           atTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCAt                                                                             <  2:5905875/93‑1 (MQ=255)

            ttGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATc                                                                            >  2:2844463/1‑93 (MQ=255)

            ttGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATc                                                                            <  2:1216040/93‑1 (MQ=255)

            ttGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATc                                                                            <  2:359122/93‑1 (MQ=255)

             tGGGCGACAGCCAGGTTTACAGCCAGACGACATGCGAGCTTCTGTCGCCCTAAACGCCCACTTCCGTAGGTCCCACCGGTTGCTGCGCAATCt                                                                           <  2:1691652/93‑1 (MQ=255)

              gggCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTg                                                                          <  1:4466679/93‑1 (MQ=255)

               ggCGACAGCCAGGTTTTCAGCCAGATGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGa                                                                         <  2:3886868/93‑1 (MQ=255)

               ggCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGa                                                                         <  2:773505/93‑1 (MQ=255)

                gCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGAt                                                                        >  1:1124531/1‑93 (MQ=255)

                 cGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATg                                                                       >  2:5714160/1‑93 (MQ=255)

                   aCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGc                                                                     <  1:7693473/93‑1 (MQ=255)

                   aCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGc                                                                     <  2:4382586/93‑1 (MQ=255)

                     aGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCtt                                                                   <  1:2655890/93‑1 (MQ=255)

                      gCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTa                                                                  >  1:9902334/1‑93 (MQ=255)

                        cAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAg                                                                >  2:3062211/1‑93 (MQ=255)

                         aGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGa                                                               >  1:859696/1‑93 (MQ=255)

                         aGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGa                                                               >  1:9977642/1‑93 (MQ=255)

                         aGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGa                                                               <  1:357268/93‑1 (MQ=255)

                          ggTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGaa                                                              <  1:8326968/93‑1 (MQ=255)

                           gTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAAt                                                             >  2:9209032/1‑93 (MQ=255)

                              ttCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCa                                                          <  1:4788967/93‑1 (MQ=255)

                               tCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCAt                                                         >  2:7255376/1‑93 (MQ=255)

                               tCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTAAt                                                         >  1:2857730/1‑93 (MQ=255)

                                 aGCCAGACGACAGGCGAACGTGTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAg                                                       <  2:2922036/93‑1 (MQ=255)

                                  gCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAgt                                                      >  2:7361689/1‑93 (MQ=255)

                                   ccAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAgtg                                                     <  2:7892260/93‑1 (MQ=255)

                                    cAGACGACCGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAgtgt                                                    <  1:2348671/93‑1 (MQ=255)

                                    cAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAgtgt                                                    >  2:9445108/1‑93 (MQ=255)

                                    cAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAgtgt                                                    >  2:8630367/1‑93 (MQ=255)

                                     aGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGtt                                                   <  2:815600/93‑1 (MQ=255)

                                      gacgacAGGCGAACTTTTGTTGTCCTCAACTCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTg                                                  <  1:6760754/93‑1 (MQ=255)

                                      gacgacAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTg                                                  >  1:9109255/1‑93 (MQ=255)

                                      gacgacAGGCGAACTTTTGTTGACCTCAACGCGCACTCCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTg                                                  <  2:8959379/93‑1 (MQ=255)

                                       acgacAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTgc                                                 <  1:60099/93‑1 (MQ=255)

                                       acgacAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTgc                                                 <  2:1997550/93‑1 (MQ=255)

                                            aGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCa                                            >  1:4316130/1‑93 (MQ=255)

                                             ggCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCaa                                           >  2:5377531/1‑93 (MQ=255)

                                               cGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACg                                         <  1:330350/93‑1 (MQ=255)

                                                gAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGc                                        <  1:3998587/93‑1 (MQ=255)

                                                gAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGGTGCGCCATTTCATGGGTTAAGCATTCATAGTGTTGCGCCCCAcca                                        >  1:5927827/1‑91 (MQ=255)

                                                 aaCTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCa                                       >  2:7104118/1‑93 (MQ=255)

                                                   cTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGa                                     >  2:3339478/1‑93 (MQ=255)

                                                    ttttGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGAc                                    >  2:6547466/1‑93 (MQ=255)

                                                     tttGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGAcc                                   >  2:464074/1‑93 (MQ=255)

                                                     tttGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGAcc                                   <  1:1287143/93‑1 (MQ=255)

                                                     tttGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGAcc                                   <  1:8828807/93‑1 (MQ=255)

                                                        gttgACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGc                                <  2:821675/93‑1 (MQ=255)

                                                          tgACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCct                              >  1:6121791/1‑93 (MQ=255)

                                                            aCCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGCCCTGCctct                            >  1:1580671/1‑93 (MQ=255)

                                                             ccTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCtt                           >  1:5125908/1‑93 (MQ=255)

                                                             ccTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCtt                           <  1:8127085/93‑1 (MQ=255)

                                                               tCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCg                         >  2:4514304/1‑93 (MQ=255)

                                                               tCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCg                         >  1:4873585/1‑93 (MQ=255)

                                                               tCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCg                         >  2:6230909/1‑93 (MQ=255)

                                                               tCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCg                         >  2:2139613/1‑93 (MQ=255)

                                                                  aCGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCa                      >  1:1922535/1‑93 (MQ=255)

                                                                  aCGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCa                      >  1:9008049/1‑93 (MQ=255)

                                                                  aCGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCa                      <  2:6712591/93‑1 (MQ=255)

                                                                  aCGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCa                      >  2:1922215/1‑93 (MQ=255)

                                                                      gcACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCt                  <  1:3896300/93‑1 (MQ=255)

                                                                       cACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTTGGCAGCCTc                 >  2:8680020/1‑93 (MQ=255)

                                                                        aCTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCg                <  1:5765987/93‑1 (MQ=255)

                                                                        aCTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCg                >  1:5375102/1‑93 (MQ=255)

                                                                         cTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGt               >  2:6067843/1‑93 (MQ=255)

                                                                         cTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGt               >  1:5718631/1‑93 (MQ=255)

                                                                         cTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGt               >  1:3128821/1‑93 (MQ=255)

                                                                          ttCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGtt              <  1:3389082/93‑1 (MQ=255)

                                                                           tCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTg             <  1:7175814/93‑1 (MQ=255)

                                                                            ccGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTgg            <  1:1414745/93‑1 (MQ=255)

                                                                             cGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGa           <  1:4646940/93‑1 (MQ=255)

                                                                              gTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAg          >  1:1784870/1‑93 (MQ=255)

                                                                                cGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTa        <  2:3472816/93‑1 (MQ=255)

                                                                                 gggCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTag       >  1:7378494/1‑93 (MQ=255)

                                                                                 gggCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTag       >  2:4928052/1‑93 (MQ=255)

                                                                                   gccgccCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTagag     >  1:6275685/1‑93 (MQ=255)

                                                                                   gccgccCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTagag     >  2:4172138/1‑93 (MQ=255)

                                                                                      gccCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGgagagaga  >  2:8462520/1‑93 (MQ=255)

                                                                                      gccCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTagagaga  <  1:9522930/93‑1 (MQ=255)

                                                                                      gccCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTagagaga  >  2:105954/1‑93 (MQ=255)

                                                                                      gccCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTagagaga  >  2:2286611/1‑93 (MQ=255)

CGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGA  >  NC_000913/3533070‑3533248

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

ACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCC  >  NC_000913/3533067‑3533253

ACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCG                                                                                               <  SRR4302540.4428786/94‑1 (MQ=60)

ACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCG                                                                                               >  SRR4302540.2806721/1‑94 (MQ=60)

ACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCG                                                                                               <  SRR4302540.2443986/94‑1 (MQ=60)

 CGCGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGG                                                                                              >  SRR4302540.6505112/1‑94 (MQ=60)

   CGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTT                                                                                            <  SRR4302540.2602219/94‑1 (MQ=60)

   CGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTT                                                                                            <  SRR4302540.6838458/94‑1 (MQ=60)

   CGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTT                                                                                            <  SRR4302540.6838457/94‑1 (MQ=60)

   CGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTT                                                                                            <  SRR4302540.3334913/94‑1 (MQ=60)

     TACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGC                                                                                          >  SRR4302540.2893407/1‑94 (MQ=60)

      ACCCAGATATTTGGCCACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCT                                                                                         <  SRR4302540.8489005/94‑1 (MQ=60)

      ACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCT                                                                                         <  SRR4302540.8488998/94‑1 (MQ=60)

      ACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCT                                                                                         <  SRR4302540.7145205/94‑1 (MQ=60)

       CCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTG                                                                                        >  SRR4302540.2674673/1‑94 (MQ=60)

        CCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGC                                                                                       <  SRR4302540.4669259/94‑1 (MQ=60)

        CCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGC                                                                                       <  SRR4302540.9254241/94‑1 (MQ=60)

        CCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGC                                                                                       >  SRR4302540.1843718/1‑94 (MQ=60)

         CAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCG                                                                                      >  SRR4302540.4839465/1‑94 (MQ=60)

         CAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCG                                                                                      <  SRR4302540.6702428/94‑1 (MQ=60)

          AGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGC                                                                                     >  SRR4302540.2336910/1‑94 (MQ=60)

          AGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGC                                                                                     >  SRR4302540.6813330/1‑94 (MQ=60)

            ATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCA                                                                                   <  SRR4302540.6911025/94‑1 (MQ=60)

             TATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCAT                                                                                  <  SRR4302540.505977/94‑1 (MQ=60)

             TATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCAT                                                                                  <  SRR4302540.2042194/94‑1 (MQ=60)

             TATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCAT                                                                                  <  SRR4302540.505978/94‑1 (MQ=60)

              ATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATC                                                                                 >  SRR4302540.2913422/1‑94 (MQ=60)

              ATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATC                                                                                 >  SRR4302540.3353747/1‑94 (MQ=60)

              ATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATC                                                                                 >  SRR4302540.4856436/1‑94 (MQ=60)

               TTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCT                                                                                >  SRR4302540.7661966/1‑94 (MQ=60)

               TTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCT                                                                                <  SRR4302540.562424/94‑1 (MQ=60)

                TGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTG                                                                               <  SRR4302540.1935437/94‑1 (MQ=60)

                 GGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGA                                                                              <  SRR4302540.4515107/94‑1 (MQ=60)

                  GGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGAT                                                                             <  SRR4302540.820238/94‑1 (MQ=60)

                  GGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGAT                                                                             <  SRR4302540.8950453/94‑1 (MQ=60)

                  GGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGAT                                                                             >  SRR4302540.1136223/1‑94 (MQ=60)

                  GGCGACAGCCAGGGTTTCAGCCAGACGGCAGGCGAACTTTTGGTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGAT                                                                             <  SRR4302540.8252912/94‑1 (MQ=60)

                    CGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGG                                                                           <  SRR4302540.2766513/94‑1 (MQ=60)

                      ACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCT                                                                         <  SRR4302540.7781051/94‑1 (MQ=60)

                      ACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCT                                                                         <  SRR4302540.9047365/94‑1 (MQ=60)

                      ACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCT                                                                         <  SRR4302540.3404121/94‑1 (MQ=60)

                       CAGCCAGGTTTTCAGCGAGACGACAGGCGATCTTTTGTTGACCTCAACGCGCTCTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTT                                                                        <  SRR4302540.7159543/94‑1 (MQ=60)

                       CAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTT                                                                        >  SRR4302540.1191801/1‑94 (MQ=60)

                        AGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTA                                                                       >  SRR4302540.10018027/1‑94 (MQ=60)

                        AGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTA                                                                       >  SRR4302540.1228873/1‑94 (MQ=60)

                        AGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTA                                                                       >  SRR4302540.2250660/1‑94 (MQ=60)

                        AGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTA                                                                       <  SRR4302540.2684716/94‑1 (MQ=60)

                         GCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAA                                                                      <  SRR4302540.620001/94‑1 (MQ=60)

                          CCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAG                                                                     >  SRR4302540.3248685/1‑94 (MQ=60)

                           CAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGA                                                                    >  SRR4302540.868823/1‑94 (MQ=60)

                           CAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGA                                                                    >  SRR4302540.10093992/1‑94 (MQ=60)

                           CAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGA                                                                    >  SRR4302540.10093993/1‑94 (MQ=60)

                           CAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGA                                                                    <  SRR4302540.1522265/94‑1 (MQ=60)

                           CAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGA                                                                    >  SRR4302540.6211638/1‑94 (MQ=60)

                            ccgacggaagtgcgcgttCAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAA                                                                   <  SRR4302540.8091861/76‑1 (MQ=60)

                            AGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAA                                                                   >  SRR4302540.4772529/1‑94 (MQ=60)

                            AGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAA                                                                   >  SRR4302540.8862826/1‑94 (MQ=60)

                            AGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAA                                                                   <  SRR4302540.5131555/94‑1 (MQ=60)

                            AGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAA                                                                   <  SRR4302540.360943/94‑1 (MQ=60)

                             GGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAAT                                                                  <  SRR4302540.8423612/94‑1 (MQ=60)

                             GGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAAT                                                                  <  SRR4302540.7644706/94‑1 (MQ=60)

                             GGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAAT                                                                  >  SRR4302540.9734335/1‑94 (MQ=60)

                             GGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAAT                                                                  <  SRR4302540.5688834/94‑1 (MQ=60)

                             GGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAAT                                                                  <  SRR4302540.4998936/94‑1 (MQ=60)

                               TTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTC                                                                <  SRR4302540.4419456/94‑1 (MQ=60)

                                 TTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCAT                                                              >  SRR4302540.2888694/1‑94 (MQ=60)

                                 TTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCAT                                                              <  SRR4302540.4840180/94‑1 (MQ=60)

                                 TTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTAAT                                                              >  SRR4302540.2889012/1‑94 (MQ=60)

                                 TTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTAAT                                                              >  SRR4302540.2888693/1‑94 (MQ=60)

                                  TCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATA                                                             >  SRR4302540.1379555/1‑94 (MQ=60)

                                   CAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAG                                                            <  SRR4302540.4608667/94‑1 (MQ=60)

                                   CAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGCTGCTGCGCCATCTGATGGCTTAAGAATTCATAG                                                            >  SRR4302540.2281089/1‑94 (MQ=60)

                                   CAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGCCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAG                                                            <  SRR4302540.372657/94‑1 (MQ=60)

                                    AGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAag                                                           >  SRR4302540.7242878/1‑92 (MQ=60)

                                    AGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGT                                                           <  SRR4302540.203288/94‑1 (MQ=60)

                                     GCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTG                                                          <  SRR4302540.2850065/94‑1 (MQ=60)

                                      CCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGT                                                         >  SRR4302540.4022329/1‑94 (MQ=60)

                                       CAGACGACCGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTT                                                        <  SRR4302540.2373966/94‑1 (MQ=60)

                                       CAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTT                                                        >  SRR4302540.5943625/1‑94 (MQ=60)

                                       CAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTT                                                        <  SRR4302540.1946644/94‑1 (MQ=60)

                                       CAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTT                                                        >  SRR4302540.8475600/1‑94 (MQ=60)

                                       CAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTT                                                        >  SRR4302540.3548891/1‑94 (MQ=60)

                                        AGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTG                                                       >  SRR4302540.4806649/1‑94 (MQ=60)

                                        AGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTG                                                       >  SRR4302540.9218730/1‑94 (MQ=60)

                                         GACGACAGGCGAACTTTTGTTGTCCTCAACTCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGC                                                      <  SRR4302540.6835473/94‑1 (MQ=60)

                                         GACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGC                                                      <  SRR4302540.6835472/94‑1 (MQ=60)

                                         GACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGC                                                      >  SRR4302540.3578866/1‑94 (MQ=60)

                                          ACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCG                                                     <  SRR4302540.60709/94‑1 (MQ=60)

                                          ACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCACCATCTGATGGCTTAAGAATTCATAGTGTTGCG                                                     <  SRR4302540.1587323/94‑1 (MQ=60)

                                            GACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCC                                                   >  SRR4302540.2337826/1‑94 (MQ=60)

                                             ACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCC                                                  >  SRR4302540.9428358/1‑94 (MQ=60)

                                             ACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCC                                                  >  SRR4302540.541517/1‑94 (MQ=60)

                                              CAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCA                                                 >  SRR4302540.4363124/1‑94 (MQ=60)

                                              CAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCA                                                 >  SRR4302540.6004213/1‑94 (MQ=60)

                                               AGGAGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCAGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAA                                                >  SRR4302540.7210919/1‑94 (MQ=60)

                                               AGCCGAACTTTTGTTGACCTCAACGCGCACTTCTGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAA                                                <  SRR4302540.4373626/94‑1 (MQ=60)

                                                GGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTTCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAAC                                               >  SRR4302540.2881730/1‑94 (MQ=60)

                                                  CGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGC                                             <  SRR4302540.333665/94‑1 (MQ=60)

                                                  CGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGC                                             >  SRR4302540.5041819/1‑94 (MQ=60)

                                                  CGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGGTGCGCCATTTCATGGGTTAAGCATTCATAGTGTTGCGCCCcacca                                             >  SRR4302540.5993326/1‑89 (MQ=60)

                                                   GAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCA                                            <  SRR4302540.4041623/94‑1 (MQ=60)

                                                   GAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCA                                            >  SRR4302540.1001482/1‑94 (MQ=60)

                                                   GAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCA                                            >  SRR4302540.2350676/1‑94 (MQ=60)

                                                    AACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAG                                           <  SRR4302540.2544355/94‑1 (MQ=60)

                                                    AACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAG                                           <  SRR4302540.2544354/94‑1 (MQ=60)

                                                     ACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGA                                          >  SRR4302540.6546903/1‑94 (MQ=60)

                                                     ACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGA                                          <  SRR4302540.404009/94‑1 (MQ=60)

                                                      CTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGAC                                         <  SRR4302540.7305796/94‑1 (MQ=60)

                                                       TTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACC                                        <  SRR4302540.5789300/94‑1 (MQ=60)

                                                       TTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACC                                        <  SRR4302540.8934572/94‑1 (MQ=60)

                                                       TTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACC                                        <  SRR4302540.584424/94‑1 (MQ=60)

                                                       TTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACC                                        <  SRR4302540.3911786/94‑1 (MQ=60)

                                                       TTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACC                                        <  SRR4302540.5789301/94‑1 (MQ=60)

                                                        TTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCT                                       <  SRR4302540.1300422/94‑1 (MQ=60)

                                                        TTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCT                                       <  SRR4302540.8930905/94‑1 (MQ=60)

                                                          TGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGC                                     <  SRR4302540.8485220/94‑1 (MQ=60)

                                                           GTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCC                                    <  SRR4302540.4256377/94‑1 (MQ=60)

                                                            TTGACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCT                                   >  SRR4302540.6189973/1‑94 (MQ=60)

                                                              GACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGCCCTGCCTCT                                 >  SRR4302540.1597942/1‑94 (MQ=60)

                                                              GACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCT                                 >  SRR4302540.260634/1‑94 (MQ=60)

                                                              GACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCT                                 >  SRR4302540.1665057/1‑94 (MQ=60)

                                                               TCCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTT                                >  SRR4302540.5181424/1‑94 (MQ=60)

                                                               GCCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTT                                <  SRR4302540.9985371/94‑1 (MQ=60)

                                                               ACCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTT                                >  SRR4302540.5704575/1‑94 (MQ=60)

                                                               ACCTCAACGCGCACTTCCGTCGGGCCGCACGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTT                                >  SRR4302540.7899888/1‑94 (MQ=60)

                                                                CCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTC                               <  SRR4302540.8221415/94‑1 (MQ=60)

                                                                CCTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTC                               >  SRR4302540.1350275/1‑94 (MQ=60)

                                                                CCTCAACGCGCACTTCCGACGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTC                               <  SRR4302540.8576087/94‑1 (MQ=60)

                                                                 CTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCG                              <  SRR4302540.6559485/94‑1 (MQ=60)

                                                                 CTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCG                              >  SRR4302540.3446286/1‑94 (MQ=60)

                                                                 CTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCG                              >  SRR4302540.4925879/1‑94 (MQ=60)

                                                                 CTCAACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCG                              <  SRR4302540.9178490/94‑1 (MQ=60)

                                                                   CAACGCGCACTTCCGTCGGGCCGCCCGGTTACTTCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGC                            <  SRR4302540.7121651/94‑1 (MQ=60)

                                                                    AACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCA                           >  SRR4302540.9116118/1‑94 (MQ=60)

                                                                    AACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCA                           >  SRR4302540.3060342/1‑94 (MQ=60)

                                                                    AACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCA                           >  SRR4302540.9156113/1‑94 (MQ=60)

                                                                    AACGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCA                           >  SRR4302540.1943496/1‑94 (MQ=60)

                                                                      CGCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTTCGCCCAACGCAGACCTGCCTCTTCGGCAGC                         >  SRR4302540.882850/1‑94 (MQ=60)

                                                                       GCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCC                        >  SRR4302540.3307785/1‑94 (MQ=60)

                                                                       GCGCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCC                        <  SRR4302540.513032/94‑1 (MQ=60)

                                                                         GCATTTCCGCCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGCCCTGCCTCTTCGGCAGCCTC                      <  SRR4302540.8435326/94‑1 (MQ=60)

                                                                         GCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTC                      >  SRR4302540.8558421/1‑94 (MQ=60)

                                                                         GCACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTC                      <  SRR4302540.3938583/94‑1 (MQ=60)

                                                                          CACTTTCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCG                     >  SRR4302540.180225/1‑94 (MQ=60)

                                                                          CACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCG                     >  SRR4302540.6098612/1‑94 (MQ=60)

                                                                          CACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCG                     >  SRR4302540.5434201/1‑94 (MQ=60)

                                                                           CCTTCCTTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGT                    <  SRR4302540.5836438/94‑1 (MQ=60)

                                                                           CCTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGT                    <  SRR4302540.6079498/94‑1 (MQ=60)

                                                                           ACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGT                    >  SRR4302540.5215934/1‑94 (MQ=60)

                                                                           ACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGT                    >  SRR4302540.3162974/1‑94 (MQ=60)

                                                                           ACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGT                    <  SRR4302540.6191384/94‑1 (MQ=60)

                                                                           ACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGT                    <  SRR4302540.5829653/94‑1 (MQ=60)

                                                                           ACTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGT                    >  SRR4302540.5781574/1‑94 (MQ=60)

                                                                            CTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTT                   >  SRR4302540.6983776/1‑94 (MQ=60)

                                                                            CTTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTT                   >  SRR4302540.8420857/1‑94 (MQ=60)

                                                                             TTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTG                  >  SRR4302540.2366711/1‑94 (MQ=60)

                                                                             TTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTG                  <  SRR4302540.3426061/94‑1 (MQ=60)

                                                                             TTCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTGGCGCCCAACGCAGACCTGCCTCTTCGGCAGGCTCGTTG                  >  SRR4302540.3114728/1‑94 (MQ=60)

                                                                              TCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGG                 <  SRR4302540.7255806/94‑1 (MQ=60)

                                                                              TCCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGG                 <  SRR4302540.7815248/94‑1 (MQ=60)

                                                                               CCGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGA                <  SRR4302540.1430013/94‑1 (MQ=60)

                                                                                CGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAG               >  SRR4302540.1804257/1‑94 (MQ=60)

                                                                                CGTCGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAG               <  SRR4302540.4696678/94‑1 (MQ=60)

                                                                                   CGGGCCGCCGGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAG            <  SRR4302540.999488/94‑1 (MQ=60)

                                                                                   CGGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAG            >  SRR4302540.7460722/1‑94 (MQ=60)

                                                                                    GGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGGGTAGA           >  SRR4302540.4899996/1‑94 (MQ=60)

                                                                                    GGGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGA           <  SRR4302540.4259601/94‑1 (MQ=60)

                                                                                     GGCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAG          >  SRR4302540.6345501/1‑94 (MQ=60)

                                                                                      GCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGA         <  SRR4302540.838953/94‑1 (MQ=60)

                                                                                      GCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGA         <  SRR4302540.603485/94‑1 (MQ=60)

                                                                                      GCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGA         <  SRR4302540.7446708/94‑1 (MQ=60)

                                                                                      GCCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGA         <  SRR4302540.1436558/94‑1 (MQ=60)

                                                                                       CCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAG        <  SRR4302540.689565/94‑1 (MQ=60)

                                                                                       CCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAG        <  SRR4302540.2010182/94‑1 (MQ=60)

                                                                                       CCGCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAG        <  SRR4302540.4288766/94‑1 (MQ=60)

                                                                                         GCCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAG      <  SRR4302540.9635693/94‑1 (MQ=60)

                                                                                          CCCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGA     >  SRR4302540.6661126/1‑94 (MQ=60)

                                                                                           CCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGAT    <  SRR4302540.6895586/94‑1 (MQ=60)

                                                                                           CCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGAT    >  SRR4302540.6394702/1‑94 (MQ=60)

                                                                                           CCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGAT    <  SRR4302540.4791978/94‑1 (MQ=60)

                                                                                           CCGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGAT    <  SRR4302540.4296181/94‑1 (MQ=60)

                                                                                            CGGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATC   >  SRR4302540.1609465/1‑94 (MQ=60)

                                                                                             GGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCC  >  SRR4302540.1352719/1‑94 (MQ=60)

                                                                                             GGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCC  >  SRR4302540.9153031/1‑94 (MQ=60)

                                                                                             GGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCC  <  SRR4302540.4016756/94‑1 (MQ=60)

                                                                                             GGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCC  <  SRR4302540.3575846/94‑1 (MQ=60)

ACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGGAGTAGAGAGAGATCC  >  NC_000913/3533067‑3533253

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`