Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,927,062 +G coding (2/1284 nt)
coding (169/183 nt)
yieM ←
b4564 ←
hypothetical protein
hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,927,0621.G100.0% 1306.9 / NA 412M1A (GTG→GCG) †
C57R (TGC→CGC) 
yieM
b4564
hypothetical protein
hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base G (173/239);  total (173/239)

Only 100 of 441 total aligned reads displayed.

ACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCACGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAGG  >  NC_000913/3926970‑3927148
                                                                                              |                                                                                      
aCTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCa                                                                                         >  1:5832304/1‑93 (MQ=255)
  tgtgGCGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCagc                                                                                       <  1:733427/93‑3 (MQ=255)
  tgtgGCGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCagc                                                                                       >  1:4500110/1‑91 (MQ=255)
   gtgGCGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCagcg                                                                                      >  1:6431864/1‑90 (MQ=255)
       cGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTc                                                                                  <  2:1824992/93‑1 (MQ=255)
       cGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTc                                                                                  <  2:7271241/93‑1 (MQ=255)
        gTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCa                                                                                 <  2:3389900/93‑1 (MQ=255)
        gTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCa                                                                                 <  2:6696787/93‑1 (MQ=255)
        gTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGAATCTTTCAGCCGACTGCGCAGCGCTTCa                                                                                 <  1:5414728/93‑1 (MQ=255)
         tGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCAc                                                                                <  1:5278364/93‑1 (MQ=255)
         tGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCAc                                                                                <  1:3039623/93‑1 (MQ=255)
          ggAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACg                                                                               >  2:3994166/1‑93 (MQ=255)
          ggAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACg                                                                               <  2:433513/93‑1 (MQ=255)
           gagaGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGc                                                                              >  2:9407253/1‑93 (MQ=255)
            agagGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGcc                                                                             <  1:7762608/93‑1 (MQ=255)
             gaggagCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCa                                                                            <  2:2649795/93‑1 (MQ=255)
             gaggagCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCa                                                                            >  2:1633276/1‑93 (MQ=255)
              aggagCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAg                                                                           >  1:3180376/1‑93 (MQ=255)
               ggagCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGc                                                                          <  1:4893461/93‑1 (MQ=255)
                gagCTGGCTTTGCTGATATCTCATCCCCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCATCg                                                                         <  2:9501166/93‑1 (MQ=255)
                gagCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCg                                                                         >  2:9293025/1‑93 (MQ=255)
                 agCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCgg                                                                        <  1:8462709/93‑1 (MQ=255)
                  gCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCggg                                                                       >  1:3600417/1‑93 (MQ=255)
                  gCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCggg                                                                       <  2:7891080/93‑1 (MQ=255)
                   cTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCgggg                                                                      >  2:3525470/1‑93 (MQ=255)
                    tGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGa                                                                     <  2:9002566/93‑1 (MQ=255)
                      gCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAAc                                                                   <  2:8221545/93‑1 (MQ=255)
                        tttGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAAcat                                                                 >  2:7662869/1‑93 (MQ=255)
                        tttGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAAcac                                                                 >  1:2227469/1‑92 (MQ=255)
                         ttGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAAcatc                                                                <  1:9492650/93‑1 (MQ=255)
                         ttGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAAcatc                                                                >  1:83017/1‑93 (MQ=255)
                         ttGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAAcatc                                                                >  2:8475325/1‑93 (MQ=255)
                            cTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACatcatc                                                             >  2:3713686/1‑93 (MQ=255)
                            cTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACatcatc                                                             <  2:77489/93‑1 (MQ=255)
                            cTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACatcatc                                                             <  2:7387320/93‑1 (MQ=255)
                              gATAGCCCATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAg                                                           <  2:5824048/93‑1 (MQ=255)
                              gATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAg                                                           <  1:6181739/93‑1 (MQ=255)
                              gATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAg                                                           <  2:8870091/93‑1 (MQ=255)
                              gATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAg                                                           >  1:10000976/1‑93 (MQ=255)
                               aTAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGt                                                          >  1:7965777/1‑93 (MQ=255)
                               aTAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGt                                                          <  1:9730566/93‑1 (MQ=255)
                                tAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTg                                                         >  2:2346370/1‑93 (MQ=255)
                                 aGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGa                                                        <  1:4642792/93‑1 (MQ=255)
                                  acacaTCACCTCTTCGGTGAGTTCCGGCGGGACTCGGTCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGAt                                                       <  1:1751470/92‑1 (MQ=255)
                                   cacaTCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGAtt                                                      <  2:2191170/93‑1 (MQ=255)
                                   cacaTCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGAtt                                                      <  2:1358625/93‑1 (MQ=255)
                                     caTCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTgc                                                    <  2:5696851/93‑1 (MQ=255)
                                     caTCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTgc                                                    >  1:1382546/1‑93 (MQ=255)
                                      ctCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTgcc                                                   <  1:2445202/92‑1 (MQ=255)
                                       tCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTgccg                                                  >  2:2111147/1‑93 (MQ=255)
                                       tCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCACCGGGGAACATCATCAGTGATTgccg                                                  >  2:9806046/1‑93 (MQ=255)
                                        cACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCTCTTCACGCCAGCGGGGAACATCATCAGTGATTgccgc                                                 <  1:3756788/93‑1 (MQ=255)
                                         cccTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTgccgcc                                                <  1:8588120/92‑1 (MQ=255)
                                            tctTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTc                                             >  2:1142766/1‑93 (MQ=255)
                                             ctTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCa                                            >  1:9324127/1‑93 (MQ=255)
                                             cgtCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCa                                            <  2:2760517/91‑1 (MQ=255)
                                               tCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAgg                                          <  1:1539600/93‑1 (MQ=255)
                                               tCGGTGACTGCCGGCGGGCCTCTTGCATCTTTCCGCCGAGTGCCCGGCGCCCCACGCCAGCGGGGAGCATCATCAGTGATTTCCCCCTTCAgg                                          <  2:4735420/93‑1 (MQ=255)
                                                cGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGAGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGc                                         <  1:4003900/93‑1 (MQ=255)
                                                 ggTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCg                                        >  2:487980/1‑93 (MQ=255)
                                                  gTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGt                                       >  1:2354102/1‑93 (MQ=255)
                                                  gTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGt                                       >  1:1225413/1‑93 (MQ=255)
                                                  gTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGt                                       >  1:4394797/1‑93 (MQ=255)
                                                    gAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTgg                                     >  1:3421658/1‑93 (MQ=255)
                                                    gAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTgg                                     >  1:7428221/1‑93 (MQ=255)
                                                     aGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTggg                                    <  2:4935746/93‑1 (MQ=255)
                                                         ccGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAAtt                                <  1:384635/93‑1 (MQ=255)
                                                            gcggGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAAttttt                             >  2:10035336/1‑93 (MQ=255)
                                                              gggACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCa                           <  2:7206619/93‑1 (MQ=255)
                                                              gggACTCGGGCATCTGTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCa                           <  1:4212267/93‑1 (MQ=255)
                                                                gACTCGGGCAGTTTTCAGCCGACTGCGCAGCGCTTCTCGCCAGGGGTGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCaaa                         <  1:2914831/93‑1 (MQ=255)
                                                                 aCTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAaag                        >  1:8159786/1‑93 (MQ=255)
                                                                  cccGGGCATCTTGCAGCGGCCTGCTCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAaaga                       <  1:4726104/91‑1 (MQ=255)
                                                                  cTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAaaga                       <  2:4513707/93‑1 (MQ=255)
                                                                   tCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAaagaa                      >  1:6574757/1‑93 (MQ=255)
                                                                   tCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAaagaa                      <  1:4103918/93‑1 (MQ=255)
                                                                   tCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCAAGACAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAaagaa                      >  2:7049573/1‑93 (MQ=255)
                                                                     gggCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAagaaga                    <  1:1621802/93‑1 (MQ=255)
                                                                     gggCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAagaaga                    <  2:5110012/93‑1 (MQ=255)
                                                                     gggCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAagaaga                    >  1:2692012/1‑93 (MQ=255)
                                                                       gCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGAcc                  >  2:5948348/1‑93 (MQ=255)
                                                                         aTCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGc                >  2:9694818/1‑93 (MQ=255)
                                                                          tCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGcc               >  2:3170381/1‑93 (MQ=255)
                                                                          tCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGcc               >  2:2850307/1‑93 (MQ=255)
                                                                          tCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGcc               >  2:4175931/1‑93 (MQ=255)
                                                                          tCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGcc               <  1:5734139/93‑1 (MQ=255)
                                                                           cTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCa              <  1:7169248/93‑1 (MQ=255)
                                                                           cTTTCAGCCGACTGCGCAGCCCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGTCGTGGGAATTTTTCAAAGAAGACCGCCa              <  1:7560819/93‑1 (MQ=255)
                                                                             ttCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGc            <  1:8965068/93‑1 (MQ=255)
                                                                              tCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCt           <  2:8704950/93‑1 (MQ=255)
                                                                               cAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTg          >  2:6341057/1‑93 (MQ=255)
                                                                                aGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGc         >  1:2053669/1‑93 (MQ=255)
                                                                                 gCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCg        <  2:5352163/93‑1 (MQ=255)
                                                                                 gCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCg        >  1:129100/1‑93 (MQ=255)
                                                                                   cGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGt      >  1:7027124/1‑93 (MQ=255)
                                                                                   cGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGt      <  1:9847446/93‑1 (MQ=255)
                                                                                    gACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTg     >  1:277139/1‑93 (MQ=255)
                                                                                      cTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAg   <  2:691478/93‑1 (MQ=255)
                                                                                       tGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAgg  <  2:8022742/93‑1 (MQ=255)
                                                                                       tGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAgg  >  1:8657205/1‑93 (MQ=255)
                                                                                              |                                                                                      
ACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCACGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAGG  >  NC_000913/3926970‑3927148

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 241 total aligned reads displayed.
AACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCACGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAGGCCAGCAG  >  NC_000913/3926969‑3927155
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AACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCA                                                                                                >  SRR4302540.5896792/1‑94 (MQ=60)
AACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCA                                                                                                >  SRR4302540.55611/1‑94 (MQ=60)
 ACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAG                                                                                              <  SRR4302540.2882869/94‑1 (MQ=60)
 ACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAG                                                                                              >  SRR4302540.2990549/1‑94 (MQ=60)
  CTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAgc                                                                                              >  SRR4302540.4548894/1‑92 (MQ=60)
  CTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAgc                                                                                              <  SRR4302540.8556032/94‑3 (MQ=60)
   TGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAgcg                                                                                             >  SRR4302540.6503452/1‑91 (MQ=60)
   TGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAgcg                                                                                             <  SRR4302540.741270/94‑4 (MQ=60)
      GGCGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTT                                                                                          <  SRR4302540.2418597/94‑1 (MQ=60)
        GGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCA                                                                                        <  SRR4302540.2917977/94‑1 (MQ=60)
        CGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCA                                                                                        >  SRR4302540.3956852/1‑94 (MQ=60)
         GTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCAC                                                                                       >  SRR4302540.8647506/1‑94 (MQ=60)
         GTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCAC                                                                                       <  SRR4302540.4153153/94‑1 (MQ=60)
         GTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCAC                                                                                       <  SRR4302540.8094668/94‑1 (MQ=60)
         GTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGAATCTTTCAGCCGACTGCGCAGCGCTTCAC                                                                                       <  SRR4302540.5474267/94‑1 (MQ=60)
          TGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACG                                                                                      <  SRR4302540.5336004/94‑1 (MQ=60)
          TGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACG                                                                                      <  SRR4302540.3072980/94‑1 (MQ=60)
          GGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACG                                                                                      <  SRR4302540.7660259/94‑1 (MQ=60)
          GGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACG                                                                                      <  SRR4302540.7660261/94‑1 (MQ=60)
            GAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCC                                                                                    >  SRR4302540.4542254/1‑94 (MQ=60)
             AGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAgcgattcacggca                                                                                   >  SRR4302540.1555150/1‑81 (MQ=60)
             AGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCA                                                                                   <  SRR4302540.7853325/94‑1 (MQ=60)
              GAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAG                                                                                  >  SRR4302540.3214929/1‑94 (MQ=60)
              GAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCCGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGCCTGCGCAGCGCTTCACGCCAG                                                                                  >  SRR4302540.1865515/1‑94 (MQ=60)
                GGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCG                                                                                <  SRR4302540.2496350/94‑1 (MQ=60)
                GGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCG                                                                                <  SRR4302540.156071/94‑1 (MQ=60)
                GGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCG                                                                                >  SRR4302540.8360023/1‑94 (MQ=60)
                 GAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGG                                                                               <  SRR4302540.9624939/94‑1 (MQ=60)
                  AGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGG                                                                              <  SRR4302540.8900719/94‑1 (MQ=60)
                  AGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGG                                                                              <  SRR4302540.7016095/94‑1 (MQ=60)
                  AGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGG                                                                              >  SRR4302540.3639764/1‑94 (MQ=60)
                  AGCTGGCTTTGCTGATAGCACACCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGG                                                                              <  SRR4302540.3909075/94‑1 (MQ=60)
                   GCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGG                                                                             <  SRR4302540.9449161/94‑1 (MQ=60)
                   GCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGG                                                                             >  SRR4302540.1354909/1‑94 (MQ=60)
                    CTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGA                                                                            >  SRR4302540.1629008/1‑94 (MQ=60)
                       GCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACA                                                                         <  SRR4302540.37981/94‑1 (MQ=60)
                        CTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACAT                                                                        <  SRR4302540.8593603/94‑1 (MQ=60)
                        CTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACAC                                                                        >  SRR4302540.2251465/1‑94 (MQ=60)
                         TTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATC                                                                       >  SRR4302540.83892/1‑94 (MQ=60)
                          TTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCA                                                                      <  SRR4302540.9605167/94‑1 (MQ=60)
                            GCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATC                                                                    <  SRR4302540.391055/94‑1 (MQ=60)
                             CTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCA                                                                   >  SRR4302540.6270316/1‑94 (MQ=60)
                             CTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCA                                                                   >  SRR4302540.71082/1‑94 (MQ=60)
                             CTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCA                                                                   >  SRR4302540.6466973/1‑94 (MQ=60)
                              TGATAGCACATCGCCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAG                                                                  <  SRR4302540.9079734/94‑1 (MQ=60)
                              TGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAG                                                                  <  SRR4302540.653648/94‑1 (MQ=60)
                              TGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAG                                                                  >  SRR4302540.10117485/1‑94 (MQ=60)
                              TGATAGCACATCACCTCTTCGGAGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAG                                                                  >  SRR4302540.8904494/1‑94 (MQ=60)
                               GATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGT                                                                 >  SRR4302540.8058612/1‑94 (MQ=60)
                               GATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGT                                                                 <  SRR4302540.6250591/94‑1 (MQ=60)
                               GATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGT                                                                 <  SRR4302540.1164922/94‑1 (MQ=60)
                                  AGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGAT                                                              <  SRR4302540.4692496/94‑1 (MQ=60)
                                  AGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGAT                                                              <  SRR4302540.8693635/94‑1 (MQ=60)
                                  AGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGAT                                                              <  SRR4302540.8528026/94‑1 (MQ=60)
                                  AGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGAT                                                              <  SRR4302540.2274040/94‑1 (MQ=60)
                                   GCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATT                                                             <  SRR4302540.7249359/94‑1 (MQ=60)
                                   GCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATT                                                             >  SRR4302540.6158797/1‑94 (MQ=60)
                                   GCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATT                                                             <  SRR4302540.2447793/94‑1 (MQ=60)
                                   ACACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGTCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATT                                                             <  SRR4302540.1770445/94‑1 (MQ=60)
                                    CACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTG                                                            >  SRR4302540.7387048/1‑94 (MQ=60)
                                     ACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGC                                                           >  SRR4302540.4951456/1‑94 (MQ=60)
                                     ACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGC                                                           >  SRR4302540.1397303/1‑94 (MQ=60)
                                      CATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCC                                                          <  SRR4302540.7126534/94‑1 (MQ=60)
                                      CATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCC                                                          >  SRR4302540.7755156/1‑94 (MQ=60)
                                      CATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCC                                                          >  SRR4302540.3785997/1‑94 (MQ=60)
                                       CTCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCG                                                         <  SRR4302540.2471535/94‑1 (MQ=60)
                                        TCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGC                                                        >  SRR4302540.8514092/1‑94 (MQ=60)
                                        TCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGC                                                        <  SRR4302540.8363353/94‑1 (MQ=60)
                                         CACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCTCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCC                                                       <  SRR4302540.3797771/94‑1 (MQ=60)
                                         CACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCC                                                       >  SRR4302540.6751383/1‑94 (MQ=60)
                                          CCCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCT                                                      <  SRR4302540.7419100/94‑1 (MQ=60)
                                          CCCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCT                                                      <  SRR4302540.8687955/94‑1 (MQ=60)
                                          ACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCT                                                      >  SRR4302540.1503907/1‑94 (MQ=60)
                                          ACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCT                                                      >  SRR4302540.7353258/1‑94 (MQ=60)
                                           CCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTT                                                     >  SRR4302540.3144618/1‑94 (MQ=60)
                                           CCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTT                                                     >  SRR4302540.5788194/1‑94 (MQ=60)
                                            CTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGCACATCATCAGTGATTGCCGCCTTC                                                    >  SRR4302540.5023844/1‑94 (MQ=60)
                                            CTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTC                                                    >  SRR4302540.4250874/1‑94 (MQ=60)
                                            CTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTC                                                    >  SRR4302540.10094709/1‑94 (MQ=60)
                                            CTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTC                                                    >  SRR4302540.1963145/1‑94 (MQ=60)
                                            CTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTC                                                    >  SRR4302540.7875718/1‑94 (MQ=60)
                                            CTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTC                                                    <  SRR4302540.9551053/94‑1 (MQ=60)
                                            CTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTC                                                    <  SRR4302540.6539259/94‑1 (MQ=60)
                                            CTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTC                                                    <  SRR4302540.3315729/94‑1 (MQ=60)
                                            CTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTC                                                    >  SRR4302540.9883598/1‑94 (MQ=60)
                                             TCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCA                                                   >  SRR4302540.8149738/1‑94 (MQ=60)
                                             TCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCA                                                   >  SRR4302540.9435352/1‑94 (MQ=60)
                                             TCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCA                                                   <  SRR4302540.4270118/94‑1 (MQ=60)
                                              CTTCGGTGAGTTCCGGCGGGACTCGGGTATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAG                                                  <  SRR4302540.2516525/94‑1 (MQ=60)
                                              CTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAG                                                  <  SRR4302540.3825001/94‑1 (MQ=60)
                                              CTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAG                                                  <  SRR4302540.466092/94‑1 (MQ=60)
                                              CTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAG                                                  <  SRR4302540.1242770/94‑1 (MQ=60)
                                              CTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAG                                                  <  SRR4302540.7368201/94‑1 (MQ=60)
                                              CTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAG                                                  <  SRR4302540.4649258/94‑1 (MQ=60)
                                              CGTCGGTGAGTTCCGGCGTGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAG                                                  <  SRR4302540.5388953/94‑1 (MQ=60)
                                               TTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGG                                                 >  SRR4302540.5808967/1‑94 (MQ=60)
                                                TCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGGGGGCAACATCATCAGTGATTGCCGCCTTCAGGC                                                <  SRR4302540.4466654/94‑1 (MQ=60)
                                                TCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGC                                                <  SRR4302540.1556622/94‑1 (MQ=60)
                                                TCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGC                                                <  SRR4302540.2764772/94‑1 (MQ=60)
                                                TCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGC                                                <  SRR4302540.4466652/94‑1 (MQ=60)
                                                TCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGC                                                >  SRR4302540.4810304/1‑94 (MQ=60)
                                                 CGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCG                                               >  SRR4302540.4898562/1‑94 (MQ=60)
                                                 CGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCG                                               >  SRR4302540.8534869/1‑94 (MQ=60)
                                                 CGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCGTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCG                                               >  SRR4302540.2158636/1‑94 (MQ=60)
                                                 CGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGAGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCG                                               <  SRR4302540.4046997/94‑1 (MQ=60)
                                                  GGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGT                                              >  SRR4302540.1237942/1‑94 (MQ=60)
                                                  GGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGT                                              >  SRR4302540.4442481/1‑94 (MQ=60)
                                                  GGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGT                                              >  SRR4302540.5453633/1‑94 (MQ=60)
                                                  GGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGT                                              >  SRR4302540.2379457/1‑94 (MQ=60)
                                                   GTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTG                                             >  SRR4302540.8967162/1‑94 (MQ=60)
                                                    TGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAAGATCATCAGTGATTGCCGCCTTCAGGCGTGG                                            >  SRR4302540.4759053/1‑94 (MQ=60)
                                                    TGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGG                                            >  SRR4302540.3458864/1‑94 (MQ=60)
                                                    GGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGG                                            <  SRR4302540.3102753/94‑1 (MQ=60)
                                                     GAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGG                                           >  SRR4302540.3773471/1‑94 (MQ=60)
                                                      AGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGA                                          >  SRR4302540.1392751/1‑94 (MQ=60)
                                                      AGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGA                                          >  SRR4302540.550458/1‑94 (MQ=60)
                                                        TTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAAT                                        <  SRR4302540.9310587/94‑1 (MQ=60)
                                                          CCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGCATTT                                      >  SRR4302540.1540094/1‑94 (MQ=60)
                                                          CCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTT                                      <  SRR4302540.2209243/94‑1 (MQ=60)
                                                           CGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTT                                     >  SRR4302540.1664047/1‑94 (MQ=60)
                                                            GGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTT                                    <  SRR4302540.4180051/94‑1 (MQ=60)
                                                            GGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGGGATTGCCGCCTTCAGGCGTGGGAATTTTT                                    >  SRR4302540.1295557/1‑94 (MQ=60)
                                                             GCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTC                                   <  SRR4302540.7456285/94‑1 (MQ=60)
                                                             GCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTC                                   <  SRR4302540.1342313/94‑1 (MQ=60)
                                                              CGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCA                                  <  SRR4302540.863709/94‑1 (MQ=60)
                                                               GGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAA                                 >  SRR4302540.389680/1‑94 (MQ=60)
                                                               GGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAA                                 <  SRR4302540.38774/94‑1 (MQ=60)
                                                               GGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAA                                 <  SRR4302540.4258130/94‑1 (MQ=60)
                                                               GGGACTCGGGCATCTGTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAA                                 <  SRR4302540.4258129/94‑1 (MQ=60)
                                                                GGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAA                                >  SRR4302540.4706340/1‑94 (MQ=60)
                                                                 GACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAG                               <  SRR4302540.6155231/94‑1 (MQ=60)
                                                                 GACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAG                               <  SRR4302540.2259058/94‑1 (MQ=60)
                                                                 GACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAG                               <  SRR4302540.7727364/94‑1 (MQ=60)
                                                                 GACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAG                               >  SRR4302540.8254533/1‑94 (MQ=60)
                                                                 GACTCGGGCAGTTTTCAGCCGACTGCGCAGCGCTTCTCGCCAGGGGTGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAG                               <  SRR4302540.2946721/94‑1 (MQ=60)
                                                                  ACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGA                              <  SRR4302540.7470847/94‑1 (MQ=60)
                                                                   CTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAA                             >  SRR4302540.6647590/1‑94 (MQ=60)
                                                                    TCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAG                            <  SRR4302540.10082467/94‑1 (MQ=60)
                                                                    TCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAG                            <  SRR4302540.2450962/94‑1 (MQ=60)
                                                                    TCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAG                            <  SRR4302540.1134833/94‑1 (MQ=60)
                                                                    TCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAG                            <  SRR4302540.4148191/94‑1 (MQ=60)
                                                                     CGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGA                           >  SRR4302540.2721088/1‑94 (MQ=60)
                                                                     CGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGA                           <  SRR4302540.7605428/94‑1 (MQ=60)
                                                                     CGGGCATCATTCAGCCGACTGCGCGGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCTGCCTGCAGGCGTGGGcatgttgaaaagaagg                           >  SRR4302540.7486598/1‑78 (MQ=60)
                                                                      GGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGAC                          <  SRR4302540.6278345/94‑1 (MQ=60)
                                                                      GGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGAC                          <  SRR4302540.1639579/94‑1 (MQ=60)
                                                                      GGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGAC                          <  SRR4302540.1639580/94‑1 (MQ=60)
                                                                       GGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACC                         <  SRR4302540.7585669/94‑1 (MQ=60)
                                                                       GGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACC                         <  SRR4302540.1372474/94‑1 (MQ=60)
                                                                       GGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACC                         <  SRR4302540.7585667/94‑1 (MQ=60)
                                                                       GGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACC                         <  SRR4302540.8253713/94‑1 (MQ=60)
                                                                       GGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACC                         <  SRR4302540.3386486/94‑1 (MQ=60)
                                                                       GGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACC                         <  SRR4302540.3753340/94‑1 (MQ=60)
                                                                        GCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCG                        >  SRR4302540.4886254/1‑94 (MQ=60)
                                                                        GCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCG                        <  SRR4302540.9920412/94‑1 (MQ=60)
                                                                        GCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCG                        <  SRR4302540.968957/94‑1 (MQ=60)
                                                                        GCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCG                        <  SRR4302540.5488868/94‑1 (MQ=60)
                                                                         CATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGC                       <  SRR4302540.5805215/94‑1 (MQ=60)
                                                                         CATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGC                       >  SRR4302540.2201477/1‑94 (MQ=60)
                                                                         CATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGC                       <  SRR4302540.3146026/94‑1 (MQ=60)
                                                                         CATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGC                       <  SRR4302540.2908175/94‑1 (MQ=60)
                                                                          ATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCC                      >  SRR4302540.3630230/1‑94 (MQ=60)
                                                                          ATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCC                      <  SRR4302540.968514/94‑1 (MQ=60)
                                                                           TCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCA                     <  SRR4302540.2039722/94‑1 (MQ=60)
                                                                           TCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCA                     >  SRR4302540.5188591/1‑94 (MQ=60)
                                                                           TCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCA                     <  SRR4302540.5797301/94‑1 (MQ=60)
                                                                            CTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAG                    >  SRR4302540.9957141/1‑94 (MQ=60)
                                                                            CTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAG                    >  SRR4302540.6054942/1‑94 (MQ=60)
                                                                            CTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAG                    <  SRR4302540.7249168/94‑1 (MQ=60)
                                                                            CTTTCAGCCGACTGCGCAGCCCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGTCGTGGGAATTTTTCAAAGAAGACCGCCAG                    <  SRR4302540.7645620/94‑1 (MQ=60)
                                                                             TTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGC                   <  SRR4302540.4637728/94‑1 (MQ=60)
                                                                             TTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGC                   <  SRR4302540.8733694/94‑1 (MQ=60)
                                                                             TTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGC                   >  SRR4302540.9519335/1‑94 (MQ=60)
                                                                              TTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCT                  <  SRR4302540.9071283/94‑1 (MQ=60)
                                                                              TTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCG                  >  SRR4302540.4135653/1‑94 (MQ=60)
                                                                                CAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGC                >  SRR4302540.2075778/1‑94 (MQ=60)
                                                                                  GCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGG              <  SRR4302540.4134067/94‑1 (MQ=60)
                                                                                  GCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGG              <  SRR4302540.167243/94‑1 (MQ=60)
                                                                                   CCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGT             >  SRR4302540.7105197/1‑94 (MQ=60)
                                                                                    CGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTG            <  SRR4302540.9962556/94‑1 (MQ=60)
                                                                                    CGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTG            <  SRR4302540.2743263/94‑1 (MQ=60)
                                                                                    CGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTG            >  SRR4302540.279867/1‑94 (MQ=60)
                                                                                    CGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTG            <  SRR4302540.3289487/94‑1 (MQ=60)
                                                                                     GACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGACTTTTTCAAAGAAGACCGCCAGCTGCGGTGA           >  SRR4302540.4810350/1‑94 (MQ=60)
                                                                                     GACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGG           >  SRR4302540.2725526/1‑94 (MQ=60)
                                                                                      ACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAG          <  SRR4302540.7995855/94‑1 (MQ=60)
                                                                                      ACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAG          <  SRR4302540.6653522/94‑1 (MQ=60)
                                                                                       CTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAGG         <  SRR4302540.3614018/94‑1 (MQ=60)
                                                                                       CTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAGG         >  SRR4302540.10018368/1‑94 (MQ=60)
                                                                                       CTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAGG         >  SRR4302540.1268163/1‑94 (MQ=60)
                                                                                       CTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAGG         >  SRR4302540.2466210/1‑94 (MQ=60)
                                                                                       CTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAGG         <  SRR4302540.3047805/94‑1 (MQ=60)
                                                                                       CTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAGG         >  SRR4302540.8757773/1‑94 (MQ=60)
                                                                                          CGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAGGCCA      <  SRR4302540.9403234/94‑1 (MQ=60)
                                                                                          CGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACAGCCAGCTGCGGTGACGCCA      >  SRR4302540.676339/1‑94 (MQ=60)
                                                                                           GCAGCGCTTGACGCCAGCGGGGAACATCATCAGTGATTGCTGCCTTAAGGCGTGGGAATTTTTCAAAGAAGACCGCCCGCTGCGGTGAGGCGAG     >  SRR4302540.5764170/1‑94 (MQ=60)
                                                                                           GCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAGGCCAG     >  SRR4302540.9150772/1‑94 (MQ=60)
                                                                                           GCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAGGCCAG     <  SRR4302540.8637497/94‑1 (MQ=60)
                                                                                              GCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAGGCCAGCAG  <  SRR4302540.9637206/94‑1 (MQ=60)
                                                                                              GCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAGGCCAGCAG  <  SRR4302540.8224113/94‑1 (MQ=60)
                                                                                              |                                                                                              
AACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCACGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAGGCCAGCAG  >  NC_000913/3926969‑3927155

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: