Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,614,238 G→T L133I (CTA→ATA)  yjjI ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,614,2380GT99.8% 1640.5 / ‑4.2 445coding (397/1551 nt)yjjIhypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base T (243/201);  minor base . (0/1);  total (243/202)
Fisher's exact test for biased strand distribution p-value = 4.54e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.28e-01

Only 100 of 452 total aligned reads displayed.

CGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTAGAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATGG  >  NC_000913/4614148‑4614327
                                                                                          |                                                                                         
cGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATaa                                                                                         <  2:7097386/93‑1 (MQ=255)
cGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATaa                                                                                         >  1:2488544/1‑93 (MQ=255)
 gATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAAt                                                                                        >  2:887818/1‑93 (MQ=255)
  atatTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAAtt                                                                                       >  2:9114613/1‑93 (MQ=255)
  atatTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAAtt                                                                                       >  1:234256/1‑93 (MQ=255)
   tatTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTc                                                                                      >  2:3002607/1‑93 (MQ=255)
     ttGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTa                                                                                    >  2:8315752/1‑93 (MQ=255)
     ttGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGGAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTa                                                                                    >  2:5299503/1‑93 (MQ=255)
       ggCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAAc                                                                                  <  2:2243986/93‑1 (MQ=255)
        gCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACa                                                                                 <  2:1207878/93‑1 (MQ=255)
         cGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACAt                                                                                <  2:3798062/93‑1 (MQ=255)
           tGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATAc                                                                              <  2:8592163/93‑1 (MQ=255)
           tGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATAc                                                                              <  2:3413088/93‑1 (MQ=255)
              aTAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGt                                                                           <  2:7814778/93‑1 (MQ=255)
               tagaGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTCTTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGtt                                                                          <  1:2918693/90‑1 (MQ=255)
               tAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGtt                                                                          <  2:474105/93‑1 (MQ=255)
                aaaGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTg                                                                         <  1:9380267/93‑1 (MQ=255)
                   ggCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAGTTTTAACATACGGTTGcaa                                                                      <  2:9561839/93‑1 (MQ=255)
                   ggCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGcaa                                                                      >  2:6982818/1‑93 (MQ=255)
                    gCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGcaac                                                                     <  1:8133527/93‑1 (MQ=255)
                      gTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGcaacaa                                                                   <  1:4700736/93‑1 (MQ=255)
                      gTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGcaacaa                                                                   <  1:2094435/93‑1 (MQ=255)
                      gTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGcaacaa                                                                   <  2:8145108/93‑1 (MQ=255)
                      gTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGcaacaa                                                                   >  1:2451043/1‑93 (MQ=255)
                       tCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCaacaac                                                                  <  2:2582091/93‑1 (MQ=255)
                       tCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCaacaac                                                                  <  2:6459335/93‑1 (MQ=255)
                         tGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGc                                                                <  2:9303550/93‑1 (MQ=255)
                          ggCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCa                                                               <  1:2992506/93‑1 (MQ=255)
                            cAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATc                                                             <  2:5377179/93‑1 (MQ=255)
                            cAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATc                                                             <  1:6307652/93‑1 (MQ=255)
                             aGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATcc                                                            <  1:7842723/93‑1 (MQ=255)
                               ggTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAg                                                          >  1:7082764/1‑93 (MQ=255)
                                gTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGt                                                         <  1:4072727/93‑1 (MQ=255)
                                gTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGt                                                         >  2:283764/1‑93 (MQ=255)
                                gTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGt                                                         >  1:6951929/1‑93 (MQ=255)
                                 ttCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGtt                                                        <  1:6629534/93‑1 (MQ=255)
                                 ttCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGtt                                                        >  1:528651/1‑93 (MQ=255)
                                 ttCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGtt                                                        <  2:7671716/93‑1 (MQ=255)
                                  tCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTg                                                       <  2:1491385/93‑1 (MQ=255)
                                      tCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGcccc                                                   >  2:4657630/1‑93 (MQ=255)
                                        gAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAg                                                 <  2:3498390/93‑1 (MQ=255)
                                        gAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAg                                                 >  1:428262/1‑93 (MQ=255)
                                         aGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAgg                                                <  1:1495505/93‑1 (MQ=255)
                                           gTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTa                                              <  2:5473242/93‑1 (MQ=255)
                                             aaCGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGa                                            >  1:1185456/1‑93 (MQ=255)
                                              aCGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGAc                                           >  2:5769961/1‑93 (MQ=255)
                                              aCGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGAc                                           <  2:6720157/93‑1 (MQ=255)
                                               cGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGAcc                                          <  2:1807669/93‑1 (MQ=255)
                                                 ccAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCgg                                        >  1:9857451/1‑93 (MQ=255)
                                                   aGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGct                                      >  1:7317694/1‑92 (MQ=255)
                                                   aGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCa                                      >  1:9004532/1‑93 (MQ=255)
                                                   aGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCa                                      >  1:1933242/1‑93 (MQ=255)
                                                    gtaaCGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAAAATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCAt                                     >  2:10017424/3‑93 (MQ=255)
                                                    gAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCAt                                     >  1:8627881/1‑93 (MQ=255)
                                                     aaaCGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATc                                    >  1:8914674/1‑93 (MQ=255)
                                                      aaCGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCg                                   >  1:9611475/1‑93 (MQ=255)
                                                      aaCGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCg                                   <  1:6396250/93‑1 (MQ=255)
                                                      aaCGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCg                                   >  2:4839216/1‑93 (MQ=255)
                                                       aCGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGa                                  >  1:1291303/1‑93 (MQ=255)
                                                       aCGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGa                                  <  2:2737621/93‑1 (MQ=255)
                                                        cGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGAt                                 >  1:1066508/1‑93 (MQ=255)
                                                        cGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGAt                                 <  1:6046364/93‑1 (MQ=255)
                                                        cGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGAt                                 <  1:7497256/93‑1 (MQ=255)
                                                        cGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGAt                                 <  2:2004052/93‑1 (MQ=255)
                                                         gTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGAtg                                >  1:6171223/1‑93 (MQ=255)
                                                            ttATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGa                             <  2:4150081/93‑1 (MQ=255)
                                                             tATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGAc                            <  2:9430523/93‑1 (MQ=255)
                                                             tATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGAc                            <  2:7158938/93‑1 (MQ=255)
                                                             tATTCGAACATCGATCTCGTCTTGTGCTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGAc                            <  2:7595811/93‑1 (MQ=255)
                                                               ttCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCg                          >  2:8682918/1‑93 (MQ=255)
                                                                tCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGa                         <  2:4888087/93‑1 (MQ=255)
                                                                tCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGGTGCCCCAGGTAGACCGGCATCGATGTGAACGa                         >  1:555998/1‑93 (MQ=255)
                                                                  gAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACg                       >  1:7963673/1‑93 (MQ=255)
                                                                   aaCATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACgg                      <  1:3922626/93‑1 (MQ=255)
                                                                    aCATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGt                     >  2:6063969/1‑93 (MQ=255)
                                                                    aCATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGt                     <  1:8053563/93‑1 (MQ=255)
                                                                     cATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTa                    >  1:3572699/1‑93 (MQ=255)
                                                                      aTCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTAc                   >  1:3841904/1‑93 (MQ=255)
                                                                         gATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACgtg                >  1:4539499/1‑93 (MQ=255)
                                                                          aTCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACgtgg               >  2:5054622/1‑93 (MQ=255)
                                                                          aTCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACgtgg               >  2:4203226/1‑93 (MQ=255)
                                                                          aTCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACgtgg               >  1:7697689/1‑93 (MQ=255)
                                                                           tctcGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACgtggt              >  2:3665482/1‑93 (MQ=255)
                                                                              cGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTggtggt           >  1:3797291/1‑93 (MQ=255)
                                                                               gTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTa          >  2:6344120/1‑93 (MQ=255)
                                                                               gTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTa          <  2:8024981/93‑1 (MQ=255)
                                                                                tCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTaa         >  1:7204810/1‑93 (MQ=255)
                                                                                tCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTaa         <  1:9220063/93‑1 (MQ=255)
                                                                                 cTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTaaa        >  1:1623747/1‑93 (MQ=255)
                                                                                 cTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTaaa        >  2:8415944/1‑93 (MQ=255)
                                                                                 cTTGAGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTaaa        <  1:8332931/93‑1 (MQ=255)
                                                                                  ttGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAg       <  1:3346039/93‑1 (MQ=255)
                                                                                   tgtgTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGa      <  1:4451792/93‑1 (MQ=255)
                                                                                    ttgtTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGaa     <  1:2904879/92‑1 (MQ=255)
                                                                                    gtgtTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGaa     >  2:3364502/1‑93 (MQ=255)
                                                                                    gtgtTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGaa     <  1:10008444/93‑1 (MQ=255)
                                                                                     tgtTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAAt    <  1:4238133/93‑1 (MQ=255)
                                                                                      gtTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATg   <  1:669811/93‑1 (MQ=255)
                                                                                       ttATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATgg  <  2:7280708/93‑1 (MQ=255)
                                                                                       ttATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATgg  >  2:4304813/1‑93 (MQ=255)
                                                                                          |                                                                                         
CGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTAGAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATGG  >  NC_000913/4614148‑4614327

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 242 total aligned reads displayed.
GCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTAGAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATGGTCAG  >  NC_000913/4614146‑4614331
                                                                                            |                                                                                             
GCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATA                                                                                              >  SRR4302540.7927949/1‑94 (MQ=60)
 CCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAA                                                                                             >  SRR4302540.2515348/1‑94 (MQ=60)
 CCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAA                                                                                             >  SRR4302540.6324789/1‑94 (MQ=60)
  CGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAAT                                                                                            <  SRR4302540.2140806/94‑1 (MQ=60)
  CGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAAT                                                                                            >  SRR4302540.7166719/1‑94 (MQ=60)
   GATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATT                                                                                           >  SRR4302540.2021652/1‑94 (MQ=60)
    ATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTC                                                                                          >  SRR4302540.6180682/1‑94 (MQ=60)
    ATATTGGCGTGCATAAAGGCGTCTGGCAGGGCTCTGTCGAGGCAACGCCAGAAAAGTTTTATTCTCACATCGATCTCGTCTTGTCTTATAATTC                                                                                          >  SRR4302540.7279844/1‑94 (MQ=60)
      ATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTA                                                                                        <  SRR4302540.1176998/94‑1 (MQ=60)
        TGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAAC                                                                                      <  SRR4302540.2962647/94‑1 (MQ=60)
        TGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAAC                                                                                      >  SRR4302540.2194866/1‑94 (MQ=60)
          GCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACAT                                                                                    <  SRR4302540.3853525/94‑1 (MQ=60)
            GTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATAC                                                                                  <  SRR4302540.7445013/94‑1 (MQ=60)
            GTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATAC                                                                                  <  SRR4302540.3148547/94‑1 (MQ=60)
            GTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGGAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATAC                                                                                  >  SRR4302540.7840588/1‑94 (MQ=60)
             TGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACG                                                                                 <  SRR4302540.1503465/94‑1 (MQ=60)
             TGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACG                                                                                 >  SRR4302540.4367048/1‑94 (MQ=60)
             TGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACG                                                                                 <  SRR4302540.8069993/94‑1 (MQ=60)
                ATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTT                                                                              >  SRR4302540.7908653/1‑94 (MQ=60)
                ATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTT                                                                              >  SRR4302540.3481346/1‑94 (MQ=60)
                ATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTT                                                                              >  SRR4302540.1156021/1‑94 (MQ=60)
                ATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTT                                                                              >  SRR4302540.2526558/1‑94 (MQ=60)
                ATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTT                                                                              <  SRR4302540.9971405/94‑1 (MQ=60)
                ATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTT                                                                              <  SRR4302540.2937313/94‑1 (MQ=60)
                 TAGAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTCTTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTG                                                                             <  SRR4302540.2950653/94‑1 (MQ=60)
                 TAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTG                                                                             <  SRR4302540.2950651/94‑1 (MQ=60)
                 TAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTG                                                                             <  SRR4302540.5993528/94‑1 (MQ=60)
                  AAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGC                                                                            <  SRR4302540.9491928/94‑1 (MQ=60)
                  AAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGC                                                                            >  SRR4302540.3732801/1‑94 (MQ=60)
                   AAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCA                                                                           >  SRR4302540.4625882/1‑94 (MQ=60)
                   AAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCA                                                                           >  SRR4302540.4625883/1‑94 (MQ=60)
                    AGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAA                                                                          >  SRR4302540.9259195/1‑94 (MQ=60)
                    AGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAA                                                                          >  SRR4302540.5460757/1‑94 (MQ=60)
                     GGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAAC                                                                         >  SRR4302540.1573215/1‑94 (MQ=60)
                      GCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACA                                                                        <  SRR4302540.9782537/94‑1 (MQ=60)
                      GCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACA                                                                        <  SRR4302540.8227925/94‑1 (MQ=60)
                      GCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACA                                                                        >  SRR4302540.669994/1‑94 (MQ=60)
                      GCGGCTGGCAGGGTTCTGTCGAGGTAACGCCAGGAACGGTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACA                                                                        <  SRR4302540.9782536/94‑1 (MQ=60)
                       CGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAA                                                                       >  SRR4302540.2477436/1‑94 (MQ=60)
                        GTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAAC                                                                      <  SRR4302540.6385876/94‑1 (MQ=60)
                        GTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAAC                                                                      <  SRR4302540.4514525/94‑1 (MQ=60)
                        GTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAAC                                                                      <  SRR4302540.8055512/94‑1 (MQ=60)
                        GTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAAC                                                                      <  SRR4302540.4750976/94‑1 (MQ=60)
                          CTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGC                                                                    >  SRR4302540.1922562/1‑94 (MQ=60)
                          CTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGC                                                                    <  SRR4302540.5863168/94‑1 (MQ=60)
                           TGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCA                                                                   >  SRR4302540.9748772/1‑94 (MQ=60)
                            GGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCAT                                                                  <  SRR4302540.3025495/94‑1 (MQ=60)
                            GGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCAT                                                                  <  SRR4302540.7481852/94‑1 (MQ=60)
                             GCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAAAGCATC                                                                 >  SRR4302540.287635/1‑94 (MQ=60)
                              CAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCC                                                                >  SRR4302540.6494692/1‑94 (MQ=60)
                              CAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCC                                                                >  SRR4302540.7345988/1‑94 (MQ=60)
                              CAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCC                                                                >  SRR4302540.2178277/1‑94 (MQ=60)
                              CAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCC                                                                <  SRR4302540.5444272/94‑1 (MQ=60)
                              CAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCC                                                                <  SRR4302540.6377892/94‑1 (MQ=60)
                               AGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCA                                                               <  SRR4302540.622348/94‑1 (MQ=60)
                               AGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCA                                                               >  SRR4302540.6666465/1‑94 (MQ=60)
                               AGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCA                                                               >  SRR4302540.3275340/1‑94 (MQ=60)
                               AGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCA                                                               >  SRR4302540.2377615/1‑94 (MQ=60)
                                GGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAG                                                              >  SRR4302540.7161591/1‑94 (MQ=60)
                                GGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAG                                                              >  SRR4302540.5208630/1‑94 (MQ=60)
                                GGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAG                                                              <  SRR4302540.4213780/94‑1 (MQ=60)
                                 GGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGT                                                             <  SRR4302540.4319211/94‑1 (MQ=60)
                                 GGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGT                                                             >  SRR4302540.7029282/1‑94 (MQ=60)
                                 GGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGT                                                             <  SRR4302540.3671031/94‑1 (MQ=60)
                                 GGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGT                                                             <  SRR4302540.1074345/94‑1 (MQ=60)
                                  GTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTT                                                            <  SRR4302540.4116628/94‑1 (MQ=60)
                                   TTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTG                                                           <  SRR4302540.6702923/94‑1 (MQ=60)
                                   TTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTG                                                           <  SRR4302540.6702922/94‑1 (MQ=60)
                                   TTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTG                                                           <  SRR4302540.1210235/94‑1 (MQ=60)
                                    TCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGC                                                          >  SRR4302540.2041214/1‑94 (MQ=60)
                                      TGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCC                                                        >  SRR4302540.2489265/1‑94 (MQ=60)
                                       GTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCC                                                       >  SRR4302540.2026563/1‑94 (MQ=60)
                                       GTCGAGGTAACGCCACAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAAAGCATCCAGTTGCCCC                                                       >  SRR4302540.3556531/1‑94 (MQ=60)
                                        TCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCA                                                      <  SRR4302540.776354/94‑1 (MQ=60)
                                        GCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCA                                                      <  SRR4302540.3059215/94‑1 (MQ=60)
                                         CGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAG                                                     >  SRR4302540.432765/1‑94 (MQ=60)
                                         CGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAG                                                     >  SRR4302540.5513936/1‑94 (MQ=60)
                                         CGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAG                                                     >  SRR4302540.2427920/1‑94 (MQ=60)
                                          GAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGG                                                    <  SRR4302540.8389106/94‑1 (MQ=60)
                                          GAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGG                                                    >  SRR4302540.4328963/1‑94 (MQ=60)
                                          GAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGG                                                    >  SRR4302540.8158188/1‑94 (MQ=60)
                                          GAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGG                                                    <  SRR4302540.4532214/94‑1 (MQ=60)
                                           AGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGT                                                   >  SRR4302540.965413/1‑94 (MQ=60)
                                           AGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGT                                                   <  SRR4302540.1511965/94‑1 (MQ=60)
                                           AGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGT                                                   >  SRR4302540.1446042/1‑94 (MQ=60)
                                            GGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTA                                                  >  SRR4302540.7200569/1‑94 (MQ=60)
                                            GGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTA                                                  >  SRR4302540.8433708/1‑94 (MQ=60)
                                             GTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAG                                                 >  SRR4302540.3488076/1‑94 (MQ=60)
                                             GTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAG                                                 <  SRR4302540.893137/94‑1 (MQ=60)
                                             GTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCAAGGTAG                                                 >  SRR4302540.3716128/1‑94 (MQ=60)
                                              TAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGA                                                >  SRR4302540.8070848/1‑94 (MQ=60)
                                              TAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGA                                                >  SRR4302540.1197687/1‑94 (MQ=60)
                                                ACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACC                                              <  SRR4302540.7973768/94‑1 (MQ=60)
                                                ACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACC                                              >  SRR4302540.2230643/1‑94 (MQ=60)
                                                 CGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCG                                             >  SRR4302540.4641960/1‑94 (MQ=60)
                                                 CGACAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCG                                             <  SRR4302540.3954719/94‑1 (MQ=60)
                                                  GCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGG                                            <  SRR4302540.2479758/94‑1 (MQ=60)
                                                   CCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGC                                           >  SRR4302540.5253631/1‑94 (MQ=60)
                                                   CCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGC                                           <  SRR4302540.5314247/94‑1 (MQ=60)
                                                   CCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGACCCAGGTAGACTGGC                                           >  SRR4302540.5654515/1‑94 (MQ=60)
                                                    CAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCT                                          >  SRR4302540.7399419/1‑94 (MQ=60)
                                                    CAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCA                                          >  SRR4302540.6801609/1‑94 (MQ=60)
                                                    CAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCA                                          >  SRR4302540.1008872/1‑94 (MQ=60)
                                                    CAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCA                                          >  SRR4302540.3881721/1‑94 (MQ=60)
                                                    CAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCA                                          >  SRR4302540.105735/1‑94 (MQ=60)
                                                    CAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCA                                          >  SRR4302540.1954311/1‑94 (MQ=60)
                                                    CAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCA                                          >  SRR4302540.9112561/1‑94 (MQ=60)
                                                     AGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCAT                                         >  SRR4302540.712447/1‑94 (MQ=60)
                                                     AGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCAT                                         >  SRR4302540.8728098/1‑94 (MQ=60)
                                                      GAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATC                                        >  SRR4302540.10025741/1‑94 (MQ=60)
                                                      GAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATC                                        <  SRR4302540.3259984/94‑1 (MQ=60)
                                                      GAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATC                                        >  SRR4302540.9017915/1‑94 (MQ=60)
                                                       AAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCG                                       >  SRR4302540.1610677/1‑94 (MQ=60)
                                                        AACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGA                                      <  SRR4302540.6467452/94‑1 (MQ=60)
                                                        AACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGA                                      >  SRR4302540.1304657/1‑94 (MQ=60)
                                                        AACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGA                                      >  SRR4302540.7028580/1‑94 (MQ=60)
                                                         ACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCcggtcgcccgccatcaat                                     >  SRR4302540.8997198/1‑76 (MQ=60)
                                                         ACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGAT                                     <  SRR4302540.1132517/94‑1 (MQ=60)
                                                         ACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGAT                                     >  SRR4302540.1077378/1‑94 (MQ=60)
                                                         ACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGAT                                     >  SRR4302540.8997196/1‑94 (MQ=60)
                                                          CGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATG                                    <  SRR4302540.1263478/94‑1 (MQ=60)
                                                          CGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATG                                    <  SRR4302540.7581012/94‑1 (MQ=60)
                                                          CGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATG                                    <  SRR4302540.1263479/94‑1 (MQ=60)
                                                          CGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATG                                    >  SRR4302540.6239975/1‑94 (MQ=60)
                                                          CGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATG                                    <  SRR4302540.6113537/94‑1 (MQ=60)
                                                          CGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATG                                    <  SRR4302540.7581013/94‑1 (MQ=60)
                                                          CGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATG                                    <  SRR4302540.7581011/94‑1 (MQ=60)
                                                           GTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGT                                   <  SRR4302540.8294783/94‑1 (MQ=60)
                                                            TTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTG                                  >  SRR4302540.9275659/1‑94 (MQ=60)
                                                            TTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTG                                  <  SRR4302540.10032115/94‑1 (MQ=60)
                                                             TTGATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCTTTAGGTAGACCGGCATCGATGTGA                                 >  SRR4302540.9071959/1‑94 (MQ=60)
                                                              TTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGAC                                >  SRR4302540.7852057/1‑94 (MQ=60)
                                                              TTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGAC                                >  SRR4302540.2944681/1‑94 (MQ=60)
                                                               TATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACC                               >  SRR4302540.9145279/1‑94 (MQ=60)
                                                               TATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACC                               <  SRR4302540.9093193/94‑1 (MQ=60)
                                                               TATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACC                               <  SRR4302540.8442361/94‑1 (MQ=60)
                                                               TATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACC                               >  SRR4302540.8333483/1‑94 (MQ=60)
                                                                ATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCG                              <  SRR4302540.9363873/94‑1 (MQ=60)
                                                                ATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCG                              >  SRR4302540.6706740/1‑94 (MQ=60)
                                                                   CGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACG                           <  SRR4302540.688906/94‑1 (MQ=60)
                                                                   CGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACG                           >  SRR4302540.8056485/1‑94 (MQ=60)
                                                                   CGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACG                           >  SRR4302540.402941/1‑94 (MQ=60)
                                                                    GAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGG                          >  SRR4302540.8208388/1‑94 (MQ=60)
                                                                     AACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGT                         <  SRR4302540.3965079/94‑1 (MQ=60)
                                                                      ACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTA                        >  SRR4302540.6838984/1‑94 (MQ=60)
                                                                      ACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTA                        >  SRR4302540.3611724/1‑94 (MQ=60)
                                                                      ACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTA                        <  SRR4302540.8147092/94‑1 (MQ=60)
                                                                      ACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTA                        >  SRR4302540.4336312/1‑94 (MQ=60)
                                                                       CATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTAC                       >  SRR4302540.3883687/1‑94 (MQ=60)
                                                                        ATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGGCCCAGGTAGACCGGCATCGAGGTGAGCGACGGTACG                      >  SRR4302540.9367568/1‑94 (MQ=60)
                                                                        ATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACG                      >  SRR4302540.4613243/1‑94 (MQ=60)
                                                                        ATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACG                      <  SRR4302540.7125627/94‑1 (MQ=60)
                                                                        ATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACG                      >  SRR4302540.566063/1‑94 (MQ=60)
                                                                         TCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGT                     >  SRR4302540.2395090/1‑94 (MQ=60)
                                                                         TCGATCTCGTCTGGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGT                     <  SRR4302540.6330938/94‑1 (MQ=60)
                                                                          CGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTG                    >  SRR4302540.4068065/1‑94 (MQ=60)
                                                                           GATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGG                   >  SRR4302540.2994360/1‑94 (MQ=60)
                                                                           GATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGG                   >  SRR4302540.4175194/1‑94 (MQ=60)
                                                                           GATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGG                   >  SRR4302540.6462854/1‑94 (MQ=60)
                                                                            ATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGG                  >  SRR4302540.8022395/1‑94 (MQ=60)
                                                                            ATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGG                  >  SRR4302540.6275620/1‑94 (MQ=60)
                                                                            ATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGG                  >  SRR4302540.2829975/1‑94 (MQ=60)
                                                                             TCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTG                 >  SRR4302540.4163082/1‑94 (MQ=60)
                                                                             TCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTG                 <  SRR4302540.2512523/94‑1 (MQ=60)
                                                                              CTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGG                <  SRR4302540.9662868/94‑1 (MQ=60)
                                                                              CTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGG                >  SRR4302540.4461772/1‑94 (MQ=60)
                                                                              CTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGG                <  SRR4302540.7773014/94‑1 (MQ=60)
                                                                              CTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGG                >  SRR4302540.4016832/1‑94 (MQ=60)
                                                                               TCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGT               <  SRR4302540.7303954/94‑1 (MQ=60)
                                                                               TCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGT               >  SRR4302540.3838669/1‑94 (MQ=60)
                                                                                CGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTA              >  SRR4302540.7843708/1‑94 (MQ=60)
                                                                                 GTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAA             >  SRR4302540.7285130/1‑94 (MQ=60)
                                                                                 GTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAA             <  SRR4302540.622550/94‑1 (MQ=60)
                                                                                  TCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAA            >  SRR4302540.1641843/1‑94 (MQ=60)
                                                                                  TCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAA            >  SRR4302540.1641534/1‑94 (MQ=60)
                                                                                  TCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAA            <  SRR4302540.9330646/94‑1 (MQ=60)
                                                                                  TCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAA            >  SRR4302540.7254121/1‑94 (MQ=60)
                                                                                   CTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAG           >  SRR4302540.4548980/1‑94 (MQ=60)
                                                                                   CTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAG           >  SRR4302540.954341/1‑94 (MQ=60)
                                                                                   CTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAG           <  SRR4302540.8429658/94‑1 (MQ=60)
                                                                                   CTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGCAAAG           >  SRR4302540.3906220/1‑94 (MQ=60)
                                                                                   CTTGAGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAG           <  SRR4302540.8429657/94‑1 (MQ=60)
                                                                                    TTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGA          >  SRR4302540.3919133/1‑94 (MQ=60)
                                                                                     TGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTTACCGACGGTACGTGGTGGTAAAGAA         <  SRR4302540.9646530/94‑1 (MQ=60)
                                                                                     TGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAA         <  SRR4302540.4500050/94‑1 (MQ=60)
                                                                                      TTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAAT        <  SRR4302540.2936588/94‑1 (MQ=60)
                                                                                      GTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAAT        <  SRR4302540.10124996/94‑1 (MQ=60)
                                                                                      GTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAAT        >  SRR4302540.1761118/1‑94 (MQ=60)
                                                                                       TGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATG       <  SRR4302540.4284249/94‑1 (MQ=60)
                                                                                       TGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATG       <  SRR4302540.8132116/94‑1 (MQ=60)
                                                                                       TGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATG       >  SRR4302540.6413603/1‑94 (MQ=60)
                                                                                       TGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATG       >  SRR4302540.138951/1‑94 (MQ=60)
                                                                                        GTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATGG      <  SRR4302540.676991/94‑1 (MQ=60)
                                                                                         TTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATGGT     >  SRR4302540.273217/1‑94 (MQ=60)
                                                                                          TATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATGGTC    <  SRR4302540.7514522/94‑1 (MQ=60)
                                                                                          TATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATGGTC    >  SRR4302540.9040225/1‑94 (MQ=60)
                                                                                          TATAATTCTAACATACGGTTGCAACAACGAATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATGGTC    <  SRR4302540.5357487/94‑1 (MQ=60)
                                                                                           ATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATGGTCA   <  SRR4302540.5422736/94‑1 (MQ=60)
                                                                                           ATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATGGTCA   <  SRR4302540.2195775/94‑1 (MQ=60)
                                                                                            TAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATGGTCAG  <  SRR4302540.5279611/94‑1 (MQ=60)
                                                                                            |                                                                                             
GCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTAGAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATGGTCAG  >  NC_000913/4614146‑4614331

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑