Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAA > NC_000913/3620126‑3620312
|
CTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGG < SRR4302540.4564771/94‑1 (MQ=0)
CTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGG < SRR4302540.9628412/94‑1 (MQ=0)
TGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGT < SRR4302540.858549/94‑1 (MQ=0)
TGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGT < SRR4302540.3536335/94‑1 (MQ=0)
TGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGT > SRR4302540.3912956/1‑94 (MQ=0)
GGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTG < SRR4302540.3447268/94‑1 (MQ=0)
GGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTG < SRR4302540.6355413/94‑1 (MQ=0)
GGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTG < SRR4302540.721717/94‑1 (MQ=0)
AAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGA > SRR4302540.994349/1‑94 (MQ=0)
AAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGA < SRR4302540.5347546/94‑1 (MQ=0)
AGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACC < SRR4302540.6191797/94‑1 (MQ=0)
GTGACATCCGGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCC < SRR4302540.9175235/94‑1 (MQ=0)
GTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCC < SRR4302540.9855778/94‑1 (MQ=0)
GTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCC < SRR4302540.7924930/94‑1 (MQ=0)
TGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCG > SRR4302540.3647404/1‑94 (MQ=0)
TGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCG < SRR4302540.907683/94‑1 (MQ=0)
AATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTG > SRR4302540.7893089/1‑94 (MQ=0)
AATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTG < SRR4302540.10099983/94‑1 (MQ=0)
AATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTG > SRR4302540.8985559/1‑94 (MQ=0)
AATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTG > SRR4302540.9230716/1‑94 (MQ=0)
ATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGT < SRR4302540.2531287/94‑1 (MQ=0)
CCCTGGCTGCCCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTA < SRR4302540.3217102/94‑1 (MQ=0)
CCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTAC < SRR4302540.10068152/94‑1 (MQ=0)
CTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACA > SRR4302540.4707395/1‑94 (MQ=0)
TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACAC < SRR4302540.3516106/94‑1 (MQ=0)
TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACAC < SRR4302540.6971471/94‑1 (MQ=0)
GGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACG < SRR4302540.1789973/94‑1 (MQ=0)
GGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACG < SRR4302540.7680477/94‑1 (MQ=0)
GGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACG < SRR4302540.7261240/94‑1 (MQ=0)
CTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCC < SRR4302540.4246275/94‑1 (MQ=0)
TGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCG > SRR4302540.1528309/1‑94 (MQ=0)
ACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGC > SRR4302540.2640934/1‑94 (MQ=0)
GGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCG < SRR4302540.2746781/94‑1 (MQ=0)
GGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCG < SRR4302540.8229127/94‑1 (MQ=0)
GGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGA > SRR4302540.6494590/1‑94 (MQ=0)
GTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAA > SRR4302540.6202523/1‑94 (MQ=0)
AGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAA < SRR4302540.5374444/94‑1 (MQ=0)
AGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAA < SRR4302540.1223895/94‑1 (MQ=0)
TGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATC < SRR4302540.3066045/94‑1 (MQ=0)
GAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCC < SRR4302540.4601681/94‑1 (MQ=0)
GGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCAC < SRR4302540.7447117/94‑1 (MQ=0)
GGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCAC < SRR4302540.5996611/94‑1 (MQ=0)
GGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCAC < SRR4302540.6187955/94‑1 (MQ=0)
GAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACC > SRR4302540.4688328/1‑94 (MQ=0)
GAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACC < SRR4302540.9348673/94‑1 (MQ=0)
GAAACCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACC < SRR4302540.5387088/94‑1 (MQ=0)
AAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGCGGACACGCCGGCGCGCAAAATCCACCT > SRR4302540.5559594/1‑94 (MQ=0)
AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTG < SRR4302540.6692251/94‑1 (MQ=0)
AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTG < SRR4302540.7054729/94‑1 (MQ=0)
AAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTG < SRR4302540.3854777/94‑1 (MQ=0)
AAGCCGCCGCTGGCTGGCATCGTGAGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCCCCTG > SRR4302540.2192619/1‑94 (MQ=0)
AGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGT < SRR4302540.2322238/94‑1 (MQ=0)
AGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGT > SRR4302540.10131794/1‑94 (MQ=0)
GCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTA < SRR4302540.761069/94‑1 (MQ=0)
tctcggcattcctgctgaaccgctcttccgatctagcgcttAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCAC < SRR4302540.6092768/53‑1 (MQ=0)
CCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCAC > SRR4302540.4993625/1‑94 (MQ=0)
CTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGC > SRR4302540.3977265/1‑94 (MQ=0)
TGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCG < SRR4302540.4012215/94‑1 (MQ=0)
TGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCG > SRR4302540.1911844/1‑94 (MQ=0)
TGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCG < SRR4302540.5969831/94‑1 (MQ=0)
TGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCG > SRR4302540.8334984/1‑94 (MQ=0)
GCCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGA < SRR4302540.3006486/94‑1 (MQ=0)
CTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACC < SRR4302540.3509345/94‑1 (MQ=0)
CTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACC < SRR4302540.1902956/94‑1 (MQ=0)
TGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCA > SRR4302540.1354490/1‑94 (MQ=0)
TGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCA > SRR4302540.1376452/1‑94 (MQ=0)
GCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATC > SRR4302540.5586481/1‑94 (MQ=0)
GCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATC > SRR4302540.5586482/1‑94 (MQ=0)
GCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATC < SRR4302540.996907/94‑1 (MQ=0)
GCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATC < SRR4302540.2382501/94‑1 (MQ=0)
GCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATC < SRR4302540.130496/94‑1 (MQ=0)
CATCTTGCGGCCTGACCGTGGAGCAGATTAAAAACCAGGTGGACCCGGTGTACACTCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCG < SRR4302540.7683657/94‑1 (MQ=0)
CATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCG < SRR4302540.5286975/94‑1 (MQ=0)
ATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGCCCATCGC > SRR4302540.6550935/1‑94 (MQ=0)
TCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCG < SRR4302540.8804036/94‑1 (MQ=0)
TCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCG < SRR4302540.2605580/94‑1 (MQ=0)
GTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGC > SRR4302540.3201263/1‑94 (MQ=0)
CGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTG > SRR4302540.1285609/1‑94 (MQ=0)
CGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTG < SRR4302540.6772573/94‑1 (MQ=0)
CGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTG < SRR4302540.6772572/94‑1 (MQ=0)
CGGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTG < SRR4302540.6494919/94‑1 (MQ=0)
GGCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGC > SRR4302540.2757264/1‑94 (MQ=0)
GCCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCC < SRR4302540.1580474/94‑1 (MQ=0)
CCTGACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCG < SRR4302540.9228765/94‑1 (MQ=0)
ACCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGG < SRR4302540.2666837/94‑1 (MQ=0)
CCGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGC < SRR4302540.4448395/94‑1 (MQ=0)
CGTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCG < SRR4302540.10109734/94‑1 (MQ=0)
GTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGC > SRR4302540.1969542/1‑94 (MQ=0)
GTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGC < SRR4302540.8536934/94‑1 (MQ=0)
GTGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGC > SRR4302540.2677145/1‑94 (MQ=0)
TGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCT < SRR4302540.3653472/94‑1 (MQ=3)
TGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCT > SRR4302540.5495767/1‑94 (MQ=3)
GGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTC < SRR4302540.7779913/94‑1 (MQ=5)
GAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCA > SRR4302540.6829459/1‑94 (MQ=8)
GAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCA < SRR4302540.2716062/94‑1 (MQ=8)
AGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCAT < SRR4302540.2189143/94‑1 (MQ=12)
AGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCAT < SRR4302540.7567901/94‑1 (MQ=12)
GCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATC < SRR4302540.6878534/94‑1 (MQ=15)
CAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCA < SRR4302540.9085637/94‑1 (MQ=20)
CAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCA < SRR4302540.1087814/94‑1 (MQ=20)
AGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAG > SRR4302540.4615694/1‑94 (MQ=0)
AGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAG < SRR4302540.4679110/94‑1 (MQ=0)
AGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAG > SRR4302540.5277529/1‑94 (MQ=0)
AGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAC > SRR4302540.5359124/1‑94 (MQ=0)
AGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAG < SRR4302540.64519/94‑1 (MQ=23)
AGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCAGCTGGCGCTCATCAG > SRR4302540.6801675/1‑94 (MQ=22)
AAATGAAAAACCAGGTGGGCCCGGTGTACACGCCGGCGCGAAAAATCCCCCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAG < SRR4302540.7405245/94‑1 (MQ=20)
TGCAAACCCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCAC < SRR4302540.3134480/94‑1 (MQ=14)
TGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCAC > SRR4302540.3768819/1‑94 (MQ=12)
TGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCAC > SRR4302540.893767/1‑94 (MQ=12)
TGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCAC > SRR4302540.2253182/1‑94 (MQ=28)
TGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCAC < SRR4302540.3920724/94‑1 (MQ=28)
TGAAAAACCAGGTGGACCCGGTCTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCAC < SRR4302540.3844788/94‑1 (MQ=26)
CAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGG < SRR4302540.1018780/94‑1 (MQ=23)
AAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGG < SRR4302540.9564225/94‑1 (MQ=28)
AAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGG < SRR4302540.1407472/94‑1 (MQ=28)
AAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGA > SRR4302540.7838445/1‑94 (MQ=27)
AAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGA > SRR4302540.2581956/1‑94 (MQ=25)
AAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGA < SRR4302540.2483302/94‑1 (MQ=25)
AAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGA > SRR4302540.8332810/1‑94 (MQ=26)
AAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGA > SRR4302540.3147389/1‑94 (MQ=26)
AAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAA < SRR4302540.5771803/94‑1 (MQ=25)
AAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAA > SRR4302540.8180848/1‑94 (MQ=25)
AAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAA < SRR4302540.9377146/94‑1 (MQ=26)
AAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAA < SRR4302540.4053247/94‑1 (MQ=26)
AGCCAGGTGGACCCGGTGTACCCGCTGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAG < SRR4302540.8743410/94‑1 (MQ=23)
ACCCAGATGGCCCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAG < SRR4302540.2407229/94‑1 (MQ=25)
ACCCAGATGGACCCGGTGCACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAG < SRR4302540.5503492/94‑1 (MQ=25)
AACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTCCCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAG < SRR4302540.3436791/94‑1 (MQ=24)
AACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAG < SRR4302540.8743406/94‑1 (MQ=25)
AACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAG < SRR4302540.5917403/94‑1 (MQ=25)
AACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAG < SRR4302540.3891258/94‑1 (MQ=25)
AACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAG < SRR4302540.3165388/94‑1 (MQ=25)
AACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAG < SRR4302540.6343492/94‑1 (MQ=25)
AACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGTGCTCATCAGCACGGAAG < SRR4302540.6504938/94‑1 (MQ=25)
AACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAG < SRR4302540.9579265/94‑1 (MQ=26)
AACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAG < SRR4302540.7260599/94‑1 (MQ=26)
AACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAG > SRR4302540.6128222/1‑94 (MQ=26)
AACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAG < SRR4302540.6951608/94‑1 (MQ=26)
AACCAGATGGACCCGGGGTACACTCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAG < SRR4302540.2407225/94‑1 (MQ=24)
ACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGG < SRR4302540.9215359/94‑1 (MQ=25)
CCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATGCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGG > SRR4302540.3659841/1‑94 (MQ=24)
CCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGG < SRR4302540.4366660/94‑1 (MQ=25)
CCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGG > SRR4302540.2395843/1‑94 (MQ=25)
CCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGG < SRR4302540.271060/94‑1 (MQ=25)
CCAGAGGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGG < SRR4302540.9276099/94‑1 (MQ=25)
CAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGG < SRR4302540.8001579/94‑1 (MQ=25)
CAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGG < SRR4302540.3083393/94‑1 (MQ=25)
CAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGG > SRR4302540.9642750/1‑94 (MQ=26)
AGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGC < SRR4302540.7439198/94‑1 (MQ=26)
AGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGC < SRR4302540.9234493/94‑1 (MQ=26)
AGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGC > SRR4302540.4113478/1‑94 (MQ=26)
GGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCA < SRR4302540.1548199/94‑1 (MQ=26)
GGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCA > SRR4302540.3999536/1‑94 (MQ=26)
GATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCA > SRR4302540.2150981/1‑94 (MQ=26)
GTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAA < SRR4302540.7123310/94‑1 (MQ=26)
ATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAA > SRR4302540.9082031/1‑94 (MQ=26)
ATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAA < SRR4302540.2335381/94‑1 (MQ=26)
ATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAA > SRR4302540.5130904/1‑94 (MQ=26)
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CTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAA > NC_000913/3620126‑3620312
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
