Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,354,166 |
(A)6→5 |
coding (1900/4554 nt) |
gltB → |
glutamate synthase large subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,354,161 | 0 | A | . | 99.5%
| 998.6
/ ‑2.9
| 217 | coding (1895/4554 nt) | gltB | glutamate synthase large subunit |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base . (115/101); total (115/102) |
| Fisher's exact test for biased strand distribution p-value = 4.70e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 247 total aligned reads displayed.
GGAGCACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGG > NC_000913/3354069‑3354247
|
ggagCACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGa < 1:5186013/93‑1 (MQ=255)
ggagCACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGa > 2:3104219/1‑93 (MQ=255)
gagCACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGaa > 1:4716539/1‑93 (MQ=255)
gagCACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGaa > 2:748778/1‑93 (MQ=255)
agCACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGaaa < 2:2770355/93‑1 (MQ=255)
gCACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGaaaa < 2:2990295/93‑1 (MQ=255)
gCACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCAGaaaa > 1:3807300/1‑93 (MQ=255)
cTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGaaaaatg < 2:5961235/93‑3 (MQ=255)
tACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGaaaaatgg < 2:1982562/93‑4 (MQ=255)
aCCGCGCAGATACGCTGGATATCCCCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGaaaaatggt < 2:1264936/93‑5 (MQ=255)
ccGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTa < 2:3244138/93‑1 (MQ=255)
cgcgCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTAc < 2:1556915/93‑1 (MQ=255)
cgcgCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTAc < 1:2340834/93‑1 (MQ=255)
cgcgCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTAc > 2:4653970/1‑93 (MQ=255)
gcgcAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACg < 1:2849665/93‑1 (MQ=255)
gcgcAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACg < 1:4301356/93‑1 (MQ=255)
cgcAGATACGCTGTATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGt < 2:2211852/93‑1 (MQ=255)
gcAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTa < 1:4928244/93‑1 (MQ=255)
gcAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTa < 2:3715311/93‑1 (MQ=255)
cAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAg > 1:27672/1‑93 (MQ=255)
cAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAg < 1:101230/93‑1 (MQ=255)
cAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAg > 1:5417931/1‑93 (MQ=255)
aGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGc < 1:1530874/93‑1 (MQ=255)
aGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGc < 1:4067669/93‑1 (MQ=255)
aGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGc > 2:5776014/1‑93 (MQ=255)
aTACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCgg < 1:5078805/93‑1 (MQ=255)
tACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGc > 2:3533374/1‑93 (MQ=255)
tACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGc > 1:2681115/1‑93 (MQ=255)
aCGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCa < 1:1259531/93‑1 (MQ=255)
cTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCg < 1:1913115/93‑1 (MQ=255)
cTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCg < 2:6067621/93‑1 (MQ=255)
tGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGt > 2:4216271/1‑93 (MQ=255)
tGGATATCACCTTTGACGTCACTAAAAACACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCCGCAccat > 1:1087408/1‑91 (MQ=255)
gATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGtgc > 2:410854/1‑93 (MQ=255)
atatCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGtgct > 1:2809019/1‑93 (MQ=255)
atatCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGtgct > 1:2275872/1‑93 (MQ=255)
tCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTgctgct > 2:664498/1‑93 (MQ=255)
cACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGctgctg > 2:4768748/1‑93 (MQ=255)
cACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGctgctg > 1:5675545/1‑93 (MQ=255)
aCCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTgg > 1:4754075/1‑93 (MQ=255)
aCCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTgg < 2:4190985/93‑1 (MQ=255)
aCCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTgg < 1:6139945/93‑1 (MQ=255)
ccTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGt > 2:3602985/1‑93 (MQ=255)
cTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTg < 2:3841247/93‑1 (MQ=255)
tttGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGc > 2:5816229/1‑93 (MQ=255)
tttGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGc > 2:1211638/1‑93 (MQ=255)
tGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGctc < 2:1018047/93‑1 (MQ=255)
cGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGctctgc > 2:243343/1‑91 (MQ=255)
cGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTcc < 2:4503490/93‑1 (MQ=255)
gTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCg < 2:6242774/93‑1 (MQ=255)
tCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGa < 2:235152/93‑1 (MQ=255)
cACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGAc < 1:4296046/93‑1 (MQ=255)
cTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTGCGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCg < 2:3139474/93‑1 (MQ=255)
tAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCgg > 1:2483563/1‑93 (MQ=255)
aaaaCCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGa > 1:4353965/1‑93 (MQ=255)
aaaCCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGaa < 1:177510/93‑1 (MQ=255)
aaaCCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGaa > 1:4159968/1‑93 (MQ=255)
aaCCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAat < 1:3184311/93‑1 (MQ=255)
aaCCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAat > 2:5420233/1‑93 (MQ=255)
aCCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAata < 1:6104359/93‑1 (MQ=255)
ccACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAatat < 2:2826512/93‑1 (MQ=255)
cACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATc > 2:3968997/1‑93 (MQ=255)
cACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATc > 2:4918109/1‑93 (MQ=255)
aCGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCg < 2:5187536/93‑1 (MQ=255)
cTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTa > 2:5285341/1‑93 (MQ=255)
tCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTaa > 1:2916897/1‑93 (MQ=255)
tCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTaa > 2:1366917/1‑93 (MQ=255)
cGAAGCGACAGTCTAAGAGCTGTGCGACAAAGCCG‑AAAAATGGCACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTaaa < 2:6216148/93‑1 (MQ=255)
cGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTaaa > 2:4980778/1‑93 (MQ=255)
aaGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGTTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGa < 2:5325361/93‑1 (MQ=255)
aGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGAt > 2:5487890/1‑93 (MQ=255)
aGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGAt < 1:2840917/93‑1 (MQ=255)
gCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATc > 2:1776984/1‑93 (MQ=255)
cGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGAttg < 2:3975729/93‑3 (MQ=255)
gACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGc > 2:943293/1‑93 (MQ=255)
aCAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGcc < 2:4306881/93‑1 (MQ=255)
aCAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGcc < 1:3711857/93‑1 (MQ=255)
gTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTg < 1:5991874/93‑1 (MQ=255)
tCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGcc < 2:2295802/93‑1 (MQ=255)
tCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGcc > 1:4521939/1‑93 (MQ=255)
aaaGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCgg > 2:2026789/1‑93 (MQ=255)
aaGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGt < 1:138355/93‑1 (MQ=255)
aaGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGt < 1:309276/93‑1 (MQ=255)
aaGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGt > 1:32270/1‑93 (MQ=255)
agagCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGtt > 2:2650210/1‑93 (MQ=255)
agCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTcc < 2:5870163/93‑1 (MQ=255)
gCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCa < 2:1677933/93‑1 (MQ=255)
gCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCa < 1:3438805/93‑1 (MQ=255)
tgtgCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGc < 1:5851558/93‑1 (MQ=255)
tgtgCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGc > 1:5711480/1‑93 (MQ=255)
tgtgCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGc > 1:2382052/1‑93 (MQ=255)
tgtgCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGc > 2:4315086/1‑93 (MQ=255)
gtgCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGcc < 2:6004374/93‑1 (MQ=255)
gCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGcccc > 1:5345398/1‑93 (MQ=255)
gACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGa < 1:3939845/93‑1 (MQ=255)
gACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGa < 2:2168703/93‑1 (MQ=255)
aCAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGAt < 2:5667288/93‑1 (MQ=255)
aCAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGAt < 2:4590611/93‑1 (MQ=255)
aCAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGAt > 1:3045317/1‑93 (MQ=255)
aCAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGAt > 1:2397489/1‑93 (MQ=255)
|
GGAGCACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGG > NC_000913/3354069‑3354247
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGGCG > NC_000913/3354073‑3354256
|
CACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAT > SRR4302533.3481794/1‑94 (MQ=60)
CACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAT > SRR4302533.327280/1‑94 (MQ=60)
CACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAT > SRR4302533.314691/1‑94 (MQ=60)
CACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAT > SRR4302533.2373081/1‑94 (MQ=60)
CACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAT > SRR4302533.2374492/1‑94 (MQ=60)
TACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGT < SRR4302533.4980599/94‑1 (MQ=60)
ACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTA < SRR4302533.874976/94‑1 (MQ=60)
CCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTAC < SRR4302533.2783044/94‑1 (MQ=60)
CGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCGCGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACG < SRR4302533.3440604/94‑1 (MQ=60)
CGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACG < SRR4302533.2355326/94‑1 (MQ=60)
CGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACG > SRR4302533.5838202/1‑94 (MQ=60)
GCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGT < SRR4302533.4327227/94‑1 (MQ=60)
GCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGT > SRR4302533.3162471/1‑94 (MQ=60)
GCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGT < SRR4302533.2867198/94‑1 (MQ=60)
GCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAG < SRR4302533.2308074/94‑1 (MQ=60)
GCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAG > SRR4302533.5450522/1‑94 (MQ=60)
GCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAG < SRR4302533.4958087/94‑1 (MQ=60)
GCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAG > SRR4302533.27859/1‑94 (MQ=60)
CAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGC > SRR4302533.4550923/1‑94 (MQ=60)
CAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGC < SRR4302533.101859/94‑1 (MQ=60)
AGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCG < SRR4302533.1540076/94‑1 (MQ=60)
AGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCG > SRR4302533.898940/1‑94 (MQ=60)
AGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCG < SRR4302533.4092430/94‑1 (MQ=60)
ATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGC > SRR4302533.2697542/1‑94 (MQ=60)
ATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGC < SRR4302533.5109500/94‑1 (MQ=60)
ATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGC < SRR4302533.4188484/94‑1 (MQ=60)
ACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCAC < SRR4302533.1267064/94‑1 (MQ=60)
CGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACC < SRR4302533.4749841/94‑1 (MQ=60)
GCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCG > SRR4302533.6082338/1‑94 (MQ=60)
CTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGT > SRR4302533.2977208/1‑94 (MQ=60)
CTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGT < SRR4302533.1924790/94‑1 (MQ=60)
CTGGATATCACCTTTGACGTCACTAAAAACACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCCGCACCAT > SRR4302533.1093814/1‑94 (MQ=60)
GATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCT > SRR4302533.2289964/1‑94 (MQ=60)
GATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCT > SRR4302533.2826304/1‑94 (MQ=60)
ATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTG < SRR4302533.1292435/94‑1 (MQ=60)
TATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGC < SRR4302533.5753643/94‑1 (MQ=60)
TCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTG > SRR4302533.5709823/1‑94 (MQ=60)
CACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGG > SRR4302533.4782893/1‑94 (MQ=60)
ACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGT > SRR4302533.2856355/1‑94 (MQ=60)
ACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGT > SRR4302533.2856356/1‑94 (MQ=60)
ACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGT < SRR4302533.6176925/94‑1 (MQ=60)
CCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTG < SRR4302533.1654348/94‑1 (MQ=60)
CCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTG < SRR4302533.2456138/94‑1 (MQ=60)
CCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTG > SRR4302533.5946207/1‑94 (MQ=60)
TTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCT < SRR4302533.3050671/94‑1 (MQ=60)
TGACGTCACTAAAGCCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCT < SRR4302533.2866938/94‑1 (MQ=60)
GACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTC > SRR4302533.2748756/1‑94 (MQ=60)
ACGTCACTAACACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCTCCGTGCTGCTGGTGCTCTCC < SRR4302533.1283550/94‑1 (MQ=60)
GTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGccccccccccccccccccc > SRR4302533.1647936/1‑75 (MQ=60)
TCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGAC < SRR4302533.4050636/94‑1 (MQ=60)
CACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACC > SRR4302533.3088355/1‑94 (MQ=60)
CACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACC < SRR4302533.4321884/94‑1 (MQ=60)
CTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGG > SRR4302533.2498874/1‑94 (MQ=60)
TAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGA > SRR4302533.4380244/1‑94 (MQ=60)
AAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAA > SRR4302533.4185181/1‑94 (MQ=60)
AAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAAT > SRR4302533.4563869/1‑94 (MQ=60)
AAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAAT > SRR4302533.5041106/1‑94 (MQ=60)
AAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAAT < SRR4302533.5256568/94‑1 (MQ=60)
AAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAAT < SRR4302533.178621/94‑1 (MQ=60)
AACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATA < SRR4302533.3203897/94‑1 (MQ=60)
AACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATA > SRR4302533.4374325/1‑94 (MQ=60)
AACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATA > SRR4302533.4368130/1‑94 (MQ=60)
ACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATAT < SRR4302533.6141205/94‑1 (MQ=60)
CTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAA > SRR4302533.1026960/1‑94 (MQ=60)
CTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAA > SRR4302533.2934779/1‑94 (MQ=60)
TCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAA < SRR4302533.6102870/94‑1 (MQ=60)
CGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAG > SRR4302533.1206454/1‑94 (MQ=60)
AGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATC > SRR4302533.4317320/1‑94 (MQ=60)
AGCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATC < SRR4302533.2858402/94‑1 (MQ=60)
GCGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCG < SRR4302533.6159537/94‑1 (MQ=60)
CGACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGC > SRR4302533.5522347/1‑94 (MQ=60)
GACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCC < SRR4302533.3784419/94‑1 (MQ=60)
GACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCC > SRR4302533.1883871/1‑94 (MQ=60)
GACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCC < SRR4302533.4829902/94‑1 (MQ=60)
ACAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCT < SRR4302533.3734652/94‑1 (MQ=60)
CAGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTG < SRR4302533.5696048/94‑1 (MQ=60)
AGTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGC > SRR4302533.3887266/1‑94 (MQ=60)
GTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGC < SRR4302533.6028168/94‑1 (MQ=60)
GTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCC > SRR4302533.2403122/1‑94 (MQ=60)
GTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCC > SRR4302533.4549317/1‑94 (MQ=60)
GTCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCC > SRR4302533.4534747/1‑94 (MQ=60)
TCAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCG > SRR4302533.4325252/1‑94 (MQ=60)
CAAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGG > SRR4302533.5165204/1‑94 (MQ=60)
AAAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGT > SRR4302533.32492/1‑94 (MQ=60)
AAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTT < SRR4302533.139236/94‑1 (MQ=60)
AAGAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTT < SRR4302533.311170/94‑1 (MQ=60)
GAGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCC < SRR4302533.5720411/94‑1 (MQ=60)
AGCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCA > SRR4302533.5367586/1‑94 (MQ=60)
GCTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAG < SRR4302533.3460041/94‑1 (MQ=60)
CTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGC > SRR4302533.2190150/1‑94 (MQ=60)
CTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGC > SRR4302533.2396783/1‑94 (MQ=60)
CTGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGC > SRR4302533.5745979/1‑94 (MQ=60)
TGTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCC < SRR4302533.5886936/94‑1 (MQ=60)
GTGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCC > SRR4302533.5397392/1‑94 (MQ=60)
TGCGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCC > SRR4302533.5377457/1‑94 (MQ=60)
CGACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGA > SRR4302533.3736201/1‑94 (MQ=60)
GACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGAT < SRR4302533.4164523/94‑1 (MQ=60)
GACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGAT < SRR4302533.3963887/94‑1 (MQ=60)
GACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGAT > SRR4302533.2412288/1‑94 (MQ=60)
GACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGAT < SRR4302533.2481709/94‑1 (MQ=60)
GACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGAT > SRR4302533.3063960/1‑94 (MQ=60)
GACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGAT > SRR4302533.1539031/1‑94 (MQ=60)
GACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCACCTGCCGGTTCCAGCCCCGAT > SRR4302533.3231167/1‑94 (MQ=60)
ACAAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATG > SRR4302533.1754199/1‑94 (MQ=60)
AAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGC < SRR4302533.2040790/94‑1 (MQ=60)
AAAGCCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGC < SRR4302533.2681365/94‑1 (MQ=60)
CCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTT > SRR4302533.1515490/1‑94 (MQ=60)
CCG‑AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTT > SRR4302533.933705/1‑94 (MQ=60)
cgAAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTG < SRR4302533.6003670/92‑1 (MQ=60)
AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGGC < SRR4302533.2260831/94‑1 (MQ=60)
AAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGGC < SRR4302533.3154618/94‑1 (MQ=60)
AAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGGCG < SRR4302533.2561635/94‑1 (MQ=60)
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CACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGGCG > NC_000913/3354073‑3354256
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
