Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,383,369 |
C→T |
T83M (ACG→ATG) |
yhcN → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,383,369 | 0 | C | T | 100.0%
| 788.1
/ NA
| 208 | T83M (ACG→ATG) | yhcN | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (93/115); total (93/115) |
Only 100 of 211 total aligned reads displayed.
AATCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAACGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGACG > NC_000913/3383280‑3383458
|
aaTCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGc > 1:4274554/1‑93 (MQ=255)
aaTCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGc > 1:3239060/1‑93 (MQ=255)
aTCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGcc > 2:4752758/1‑93 (MQ=255)
aTCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGcc > 1:5566753/1‑93 (MQ=255)
aTCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGcc < 2:1830655/93‑1 (MQ=255)
ggACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTAcc > 1:3829109/1‑93 (MQ=255)
ggACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTAcc < 1:3344804/93‑1 (MQ=255)
gACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCa < 1:3656175/93‑1 (MQ=255)
gACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCa < 1:5762102/93‑1 (MQ=255)
aCCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAg > 1:1791173/1‑93 (MQ=255)
cGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGAt > 1:5809438/1‑93 (MQ=255)
gTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGAtt > 2:87039/1‑93 (MQ=255)
gTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGAtt > 2:6267046/1‑93 (MQ=255)
gTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGAtt > 1:2363129/1‑93 (MQ=255)
gTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGAtt > 1:2635692/1‑93 (MQ=255)
tATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTa > 1:2554420/1‑93 (MQ=255)
tCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACt < 1:2840381/93‑1 (MQ=255)
ccGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTg < 1:4458900/93‑1 (MQ=255)
ccGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTg > 2:6178040/1‑93 (MQ=255)
ccGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTg < 2:3829275/93‑1 (MQ=255)
gTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGaa < 2:1981404/93‑1 (MQ=255)
tAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAg < 2:422645/93‑1 (MQ=255)
aaGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGc < 2:3751041/93‑1 (MQ=255)
aaGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGc > 2:2848028/1‑93 (MQ=255)
aGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCt > 2:3968099/1‑93 (MQ=255)
gtggtgTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTc < 1:5274583/93‑1 (MQ=255)
tggtgTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCg < 1:1483887/93‑1 (MQ=255)
tggtgTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCg < 1:4958213/93‑1 (MQ=255)
ggtgTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGt < 1:310786/93‑1 (MQ=255)
ggtgTGGCGTCTGCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGt < 2:1565573/93‑1 (MQ=255)
ggtaTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGt < 1:6307747/93‑1 (MQ=255)
gtgtGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTa < 1:5797217/93‑1 (MQ=255)
tgtgGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAg > 2:3435192/1‑93 (MQ=255)
gtgGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGc < 1:3603633/93‑1 (MQ=255)
gtgGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGc < 1:1350684/93‑1 (MQ=255)
tgGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCg > 2:302075/1‑93 (MQ=255)
ggCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCgg < 1:587092/93‑1 (MQ=255)
tcGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGt < 1:6048319/92‑1 (MQ=255)
gTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGa < 2:5659005/93‑1 (MQ=255)
tCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGac > 2:2446222/1‑93 (MQ=255)
tCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGac > 1:1677828/1‑93 (MQ=255)
tCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGac < 1:6109397/93‑1 (MQ=255)
ttCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGacac > 1:3909761/1‑93 (MQ=255)
tCGCTAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACAcc < 1:5899284/93‑1 (MQ=255)
cGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCt < 1:4490002/93‑1 (MQ=255)
gCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTg < 2:1629622/93‑1 (MQ=255)
gCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTg > 2:5522526/1‑93 (MQ=255)
aaTGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCa > 2:916442/1‑93 (MQ=255)
aaTGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCa > 1:963617/1‑93 (MQ=255)
aaTGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCa < 2:499767/93‑1 (MQ=255)
aTGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCAc > 1:737207/1‑93 (MQ=255)
tGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACg > 1:4677884/1‑93 (MQ=255)
atatGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTa < 2:5880977/93‑1 (MQ=255)
tatGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTAc > 2:2287903/1‑93 (MQ=255)
atGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACg > 2:1868303/1‑93 (MQ=255)
tGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACgg > 1:300151/1‑93 (MQ=255)
gCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGc < 1:3578733/93‑1 (MQ=255)
gCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGc > 2:2912408/1‑93 (MQ=255)
cGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCt > 2:2554692/1‑93 (MQ=255)
gTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCGGATAATGGAGCCTCGAAGCGGGAACACCGGGCACGCAACGGCta > 1:5857099/1‑92 (MQ=255)
gTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTg > 2:4309616/1‑93 (MQ=255)
gAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCGTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGaa > 2:6115697/1‑93 (MQ=255)
gAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGaa < 1:582137/93‑1 (MQ=255)
gAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGaa < 1:2263725/93‑1 (MQ=255)
gAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGaa < 2:4878178/93‑1 (MQ=255)
aaTGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACt < 1:2908719/93‑1 (MQ=255)
aaTGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACt > 2:1951393/1‑93 (MQ=255)
aTGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTg < 1:4492520/93‑1 (MQ=255)
cTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTAc > 1:341345/1‑93 (MQ=255)
tGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACa > 2:78732/1‑93 (MQ=255)
gAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACaa < 2:2807775/93‑1 (MQ=255)
aCAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAAt < 2:926201/93‑1 (MQ=255)
aCAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAAt < 1:2163672/93‑1 (MQ=255)
aaaaaaGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATaa < 2:1419846/93‑1 (MQ=255)
aaaaGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAAc > 1:1395454/1‑93 (MQ=255)
gCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTc < 2:1140996/93‑1 (MQ=255)
gCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTc < 2:5110004/93‑1 (MQ=255)
cGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCa < 2:3570651/93‑1 (MQ=255)
ggAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCAt > 1:4609975/1‑93 (MQ=255)
gAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATc < 2:3697912/93‑1 (MQ=255)
gAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATc < 1:1749297/93‑1 (MQ=255)
gAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATc < 1:6126889/93‑1 (MQ=255)
agagAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGt > 2:535115/1‑93 (MQ=255)
gagaAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTc > 2:1681845/1‑93 (MQ=255)
gagaAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTc > 1:6139762/1‑93 (MQ=255)
gagaAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTc < 2:663499/93‑1 (MQ=255)
agaAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCt < 1:1601979/93‑1 (MQ=255)
gaAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCtt < 1:985604/93‑1 (MQ=255)
aaaGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTg > 1:130357/1‑93 (MQ=255)
aaaGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTg > 1:1442107/1‑93 (MQ=255)
aaGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGt > 1:1051348/1‑93 (MQ=255)
aaGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGt > 2:2178536/1‑93 (MQ=255)
aaGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGt < 1:928899/93‑1 (MQ=255)
aGGCGCAATGGCCTACCAGATTACTGAAGCTAGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTc < 2:5690203/93‑1 (MQ=255)
ggCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTcc > 2:4427267/1‑93 (MQ=255)
ggCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTcc > 1:534446/1‑93 (MQ=255)
cgcAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCcga < 1:2739072/93‑1 (MQ=255)
cgcAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCcga < 2:5811179/93‑1 (MQ=255)
cgcAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCcga < 1:869368/93‑1 (MQ=255)
gcAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCcgac < 2:4357065/93‑1 (MQ=255)
|
AATCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAACGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGACG > NC_000913/3383280‑3383458
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGCAATCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAACGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGACGATAT > NC_000913/3383277‑3383462
|
gctgtatGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATG < SRR4302533.5349519/87‑1 (MQ=60)
AGCAATCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATG < SRR4302533.2344027/94‑1 (MQ=60)
AGCAATCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATG < SRR4302533.3523339/94‑1 (MQ=60)
GCAATCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGG < SRR4302533.5451954/94‑1 (MQ=60)
GCAATCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGG < SRR4302533.451925/94‑1 (MQ=60)
CAATCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGC > SRR4302533.3259023/1‑94 (MQ=60)
CAATCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGC > SRR4302533.4300270/1‑94 (MQ=60)
AATCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCC > SRR4302533.5600402/1‑94 (MQ=60)
AATCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCC < SRR4302533.3016025/94‑1 (MQ=60)
ATCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAACGGCGCAATGGCCT > SRR4302533.3296130/1‑94 (MQ=60)
ATCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCT < SRR4302533.2680058/94‑1 (MQ=60)
ATCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCT > SRR4302533.1572370/1‑94 (MQ=60)
CGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTAC < SRR4302533.4489077/94‑1 (MQ=60)
CGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTAC > SRR4302533.3377709/1‑94 (MQ=60)
GGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACC > SRR4302533.3852521/1‑94 (MQ=60)
GGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCA < SRR4302533.3365471/94‑1 (MQ=60)
GACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAG < SRR4302533.3678648/94‑1 (MQ=60)
GACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAG > SRR4302533.1802063/1‑94 (MQ=60)
GACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAG < SRR4302533.2113200/94‑1 (MQ=60)
GACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAG < SRR4302533.5796877/94‑1 (MQ=60)
CCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGAT > SRR4302533.5844521/1‑94 (MQ=60)
CGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATT > SRR4302533.2651889/1‑94 (MQ=60)
CGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATT > SRR4302533.2377749/1‑94 (MQ=60)
GTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTA > SRR4302533.2570135/1‑94 (MQ=60)
GTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTA > SRR4302533.5031357/1‑94 (MQ=60)
ATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACT > SRR4302533.5844862/1‑94 (MQ=60)
TCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTG < SRR4302533.2857861/94‑1 (MQ=60)
TCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTG < SRR4302533.4518785/94‑1 (MQ=60)
CCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGA > SRR4302533.580108/1‑94 (MQ=60)
CCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGA < SRR4302533.4485870/94‑1 (MQ=60)
CCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGA > SRR4302533.1259733/1‑94 (MQ=60)
CCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGA < SRR4302533.2910765/94‑1 (MQ=60)
CGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAA < SRR4302533.6157546/94‑1 (MQ=60)
CGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAA < SRR4302533.2466809/94‑1 (MQ=60)
AAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCT < SRR4302533.5382695/94‑1 (MQ=60)
AAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCT < SRR4302533.1357950/94‑1 (MQ=60)
AGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTC < SRR4302533.4838853/94‑1 (MQ=60)
GTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCG < SRR4302533.5306210/94‑1 (MQ=60)
TGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGT < SRR4302533.4988249/94‑1 (MQ=60)
TGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGT < SRR4302533.805912/94‑1 (MQ=60)
TGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGT < SRR4302533.1492842/94‑1 (MQ=60)
GGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTA < SRR4302533.312689/94‑1 (MQ=60)
GGTATGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTA < SRR4302533.6345576/94‑1 (MQ=60)
GTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAG < SRR4302533.5832241/94‑1 (MQ=60)
GTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCG < SRR4302533.3625811/94‑1 (MQ=60)
GTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCG < SRR4302533.3625812/94‑1 (MQ=60)
GTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCG < SRR4302533.1776559/94‑1 (MQ=60)
GTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCG < SRR4302533.1358807/94‑1 (MQ=60)
GGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGT > SRR4302533.6115326/1‑94 (MQ=60)
GGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGT > SRR4302533.934734/1‑94 (MQ=60)
GGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGT < SRR4302533.590559/94‑1 (MQ=60)
TCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTG < SRR4302533.6084965/94‑1 (MQ=60)
CGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGA > SRR4302533.5832353/1‑94 (MQ=60)
GTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGAC < SRR4302533.6237259/94‑1 (MQ=60)
GTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGAC > SRR4302533.1687987/1‑94 (MQ=60)
TCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACA < SRR4302533.6146278/94‑1 (MQ=60)
CTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACAC > SRR4302533.3933639/1‑94 (MQ=60)
TCGCTAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCT < SRR4302533.5934911/94‑1 (MQ=60)
CGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTG < SRR4302533.4517192/94‑1 (MQ=60)
CCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGC > SRR4302533.2358975/1‑94 (MQ=60)
CAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCA > SRR4302533.969277/1‑94 (MQ=60)
AATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCAC > SRR4302533.741547/1‑94 (MQ=60)
ATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACG > SRR4302533.4706232/1‑94 (MQ=60)
ATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTAC < SRR4302533.182592/94‑1 (MQ=60)
ATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTAC < SRR4302533.4676193/94‑1 (MQ=60)
TATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACG < SRR4302533.704692/94‑1 (MQ=60)
ATGCGTGAAATGCTGAACAAAAAAGCGGAAGATAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGG > SRR4302533.1651149/1‑94 (MQ=60)
ATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGG > SRR4302533.301988/1‑94 (MQ=60)
GCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCT < SRR4302533.3600784/94‑1 (MQ=60)
CGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCggataatggagcctcgaagcgggaacaccgggcacgcaacggcta > SRR4302533.5892506/1‑49 (MQ=60)
CGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTG > SRR4302533.1396568/1‑94 (MQ=60)
GTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGA > SRR4302533.45488/1‑94 (MQ=60)
GAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAAC < SRR4302533.2277732/94‑1 (MQ=60)
GAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAAC < SRR4302533.585567/94‑1 (MQ=60)
AAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACT < SRR4302533.3722474/94‑1 (MQ=60)
AATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTG < SRR4302533.2926575/94‑1 (MQ=60)
ATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGT < SRR4302533.4519726/94‑1 (MQ=60)
TGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTA > SRR4302533.538938/1‑94 (MQ=60)
GCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTAC > SRR4302533.4340590/1‑94 (MQ=60)
GCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTAC > SRR4302533.325066/1‑94 (MQ=60)
GCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTAC < SRR4302533.349726/94‑1 (MQ=60)
GCTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTAC > SRR4302533.343429/1‑94 (MQ=60)
CTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACA < SRR4302533.6172514/94‑1 (MQ=60)
CTGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACA > SRR4302533.2584363/1‑94 (MQ=60)
TGAACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAA > SRR4302533.5904090/1‑94 (MQ=60)
ACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATA < SRR4302533.4045788/94‑1 (MQ=60)
ACAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATA < SRR4302533.2176984/94‑1 (MQ=60)
CAAAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAA < SRR4302533.3058493/94‑1 (MQ=60)
AAAAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAAC > SRR4302533.1403862/1‑94 (MQ=60)
AAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCC < SRR4302533.6070753/94‑1 (MQ=60)
AAAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCC < SRR4302533.5860251/94‑1 (MQ=60)
AAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCT > SRR4302533.971953/1‑94 (MQ=60)
AAGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCT < SRR4302533.4154227/94‑1 (MQ=60)
AGCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTC > SRR4302533.3633059/1‑94 (MQ=60)
GCGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCA < SRR4302533.5931852/94‑1 (MQ=60)
CGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCAT > SRR4302533.4637894/1‑94 (MQ=60)
CGGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCAT < SRR4302533.1462360/94‑1 (MQ=60)
GGAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTaatg > SRR4302533.2260017/1‑90 (MQ=60)
GAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCG < SRR4302533.6163817/94‑1 (MQ=60)
GAAGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCG < SRR4302533.1759947/94‑1 (MQ=60)
AGAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTC > SRR4302533.6176742/1‑94 (MQ=60)
GAGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCT > SRR4302533.3933094/1‑94 (MQ=60)
AGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTT < SRR4302533.1611681/94‑1 (MQ=60)
AGAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTT < SRR4302533.6111892/94‑1 (MQ=60)
GAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTG > SRR4302533.1450807/1‑94 (MQ=60)
GAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTG > SRR4302533.131174/1‑94 (MQ=60)
GAAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTG < SRR4302533.991374/94‑1 (MQ=60)
AAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGT > SRR4302533.1057536/1‑94 (MQ=60)
AAAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGT < SRR4302533.1713814/94‑1 (MQ=60)
AAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTC < SRR4302533.934352/94‑1 (MQ=60)
AAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTC < SRR4302533.3076109/94‑1 (MQ=60)
AAGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTC < SRR4302533.567345/94‑1 (MQ=60)
AGGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCC > SRR4302533.537625/1‑94 (MQ=60)
GGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCG > SRR4302533.1447522/1‑94 (MQ=60)
GGCGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCG < SRR4302533.5348794/94‑1 (MQ=60)
CGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGAC < SRR4302533.2755868/94‑1 (MQ=60)
CGCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGAC < SRR4302533.874472/94‑1 (MQ=60)
GCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGACG > SRR4302533.932759/1‑94 (MQ=60)
GCAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGACG < SRR4302533.2795538/94‑1 (MQ=60)
CAATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGACGA > SRR4302533.6055940/1‑94 (MQ=60)
AATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGACGAT < SRR4302533.2303854/94‑1 (MQ=60)
AATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGACGAT > SRR4302533.4245428/1‑94 (MQ=60)
ATGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGACGATA > SRR4302533.3044177/1‑94 (MQ=60)
TGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGTCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGACGATAT < SRR4302533.3399938/94‑1 (MQ=60)
TGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGACGATAT > SRR4302533.5230717/1‑94 (MQ=60)
|
AGCAATCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAACGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAAACCCTCATCGTCTTGTCCGACGATAT > NC_000913/3383277‑3383462
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
