Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,722,558 |
T→C |
G130G (GGA→GGG) |
glyQ ← |
glycine tRNA synthetase alpha subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,722,558 | 0 | T | C | 100.0%
| 769.5
/ NA
| 238 | G130G (GGA→GGG) | glyQ | glycine tRNA synthetase alpha subunit |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (121/117); total (121/117) |
Only 100 of 255 total aligned reads displayed.
GTAACCGGTTTACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGTCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGCTCTTTCAGAGA > NC_000913/3722469‑3722647
|
gTAACCGGTTTACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGcccc > 1:5441920/1‑93 (MQ=255)
aaCCGGTTTACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCa < 1:928097/93‑1 (MQ=255)
aaCCGGTTTACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCa > 2:1949104/1‑93 (MQ=255)
cGGTTTACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGc > 2:2815993/1‑93 (MQ=255)
ggTTTACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCa > 2:2166168/1‑93 (MQ=255)
gTTTACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCAc > 2:1671759/1‑93 (MQ=255)
tttACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCAcc > 1:6145793/1‑93 (MQ=255)
ttACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCAccc < 2:4528263/93‑1 (MQ=255)
tACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCa > 1:4476556/1‑93 (MQ=255)
tACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCa < 2:410984/93‑1 (MQ=255)
cacTCCAGACCACCAACCGGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGc < 2:5685925/93‑1 (MQ=255)
acTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCg > 1:5993226/1‑93 (MQ=255)
cTCCAGCCCACCAACCTGCTGGAAGTAAGTGACCTGCGTCACGTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGt < 2:26671/93‑1 (MQ=255)
cTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGt > 2:1631782/1‑93 (MQ=255)
tCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTc > 2:2705337/1‑93 (MQ=255)
tCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTc > 2:2549411/1‑93 (MQ=255)
tCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTc < 2:2015640/93‑1 (MQ=255)
ccAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCg < 2:3963708/93‑1 (MQ=255)
ccAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCg > 2:664614/1‑93 (MQ=255)
aGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCggg > 1:1599355/1‑93 (MQ=255)
aGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCggg > 1:5693102/1‑93 (MQ=255)
gACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGt > 2:1872666/1‑93 (MQ=255)
gACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGt < 2:4639469/93‑1 (MQ=255)
gACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGt < 1:4811283/93‑1 (MQ=255)
gACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGt < 1:1101936/93‑1 (MQ=255)
gACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGt > 1:3479031/1‑93 (MQ=255)
accaccAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGtt < 2:4891076/93‑1 (MQ=255)
ccaccaACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGttt > 1:4140085/1‑93 (MQ=255)
caccaACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGtttt < 1:2436885/93‑1 (MQ=255)
accaATCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTc > 2:3636991/1‑93 (MQ=255)
accaACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTc > 1:1760906/1‑93 (MQ=255)
accaACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTc > 1:1014712/1‑93 (MQ=255)
accaACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTc < 2:3553338/93‑1 (MQ=255)
caACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTccc < 2:232707/93‑1 (MQ=255)
aaCCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCa > 1:5543703/1‑93 (MQ=255)
ccTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGt > 2:3723423/1‑93 (MQ=255)
ctgctgGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGtt < 2:4936733/93‑1 (MQ=255)
tgctgGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTa > 1:5320360/1‑93 (MQ=255)
tgctgGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTa < 1:6112346/93‑1 (MQ=255)
gctgGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTAt > 2:3119935/1‑93 (MQ=255)
ggAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCtt < 2:55889/93‑1 (MQ=255)
ggAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCtt > 1:4341213/1‑93 (MQ=255)
gAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTc > 2:1415518/1‑93 (MQ=255)
aagtaagtGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTcc < 1:241850/93‑1 (MQ=255)
agtaagtGAACTGCGTCACTTCCATGCCGTTCAACCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCa > 2:4799070/1‑93 (MQ=255)
gtaagtGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCAc > 1:366846/1‑93 (MQ=255)
ataagtGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCAc < 2:3684272/92‑1 (MQ=255)
taagtGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACg < 2:3821871/93‑1 (MQ=255)
taagtGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACg > 2:117730/1‑93 (MQ=255)
agtGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCGCGaa < 2:4085477/93‑1 (MQ=255)
agtGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGaa < 1:4385155/93‑1 (MQ=255)
gtGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGaaa < 2:5052896/93‑1 (MQ=255)
tGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGaaa < 1:5405786/92‑1 (MQ=255)
tGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGaaa > 2:5405786/1‑92 (MQ=255)
tGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAAc > 2:1535264/1‑93 (MQ=255)
aCTGTGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGa < 2:1369747/93‑1 (MQ=255)
aCTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGa < 1:452227/93‑1 (MQ=255)
tGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATg < 2:5111618/93‑1 (MQ=255)
tGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATg > 1:2646498/1‑93 (MQ=255)
gTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCg > 1:3988568/1‑93 (MQ=255)
tcgcTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGt < 1:496614/90‑1 (MQ=255)
tCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGt < 2:749821/93‑1 (MQ=255)
cACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTg > 2:2259882/1‑93 (MQ=255)
cACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTg > 1:2229046/1‑93 (MQ=255)
cTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGaa < 1:1625358/93‑1 (MQ=255)
cTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGaa > 1:2063539/1‑93 (MQ=255)
cTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGaa > 1:5275210/1‑93 (MQ=255)
cTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGaa > 1:4212540/1‑93 (MQ=255)
ttCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAAt > 1:3929812/1‑93 (MQ=255)
tCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATa > 2:3380646/1‑93 (MQ=255)
tCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATa > 1:2403378/1‑93 (MQ=255)
ccATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAg < 2:1746790/93‑1 (MQ=255)
cATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGt < 1:3161094/93‑1 (MQ=255)
cATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGt > 2:3069468/1‑93 (MQ=255)
cATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGt > 2:5929320/1‑93 (MQ=255)
cATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGt < 2:6019323/93‑1 (MQ=255)
gCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCgg < 2:5336900/93‑1 (MQ=255)
gCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCgg < 2:4592508/93‑1 (MQ=255)
cGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGt < 1:3043998/93‑1 (MQ=255)
gTTCAGCCCCACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTc > 2:6148792/1‑93 (MQ=255)
gTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTc < 2:2776527/93‑1 (MQ=255)
gTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTc < 2:4370930/93‑1 (MQ=255)
gTTCAGCCACACTTCCCAGCCCAGCACCCAGGCACCCAGCGTCGGGGTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTc > 1:3225601/1‑93 (MQ=255)
tCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCa < 1:351729/93‑1 (MQ=255)
cAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCAt < 2:4024545/93‑1 (MQ=255)
aGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATg < 2:3003959/93‑1 (MQ=255)
aGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATg < 2:1232823/93‑1 (MQ=255)
aGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATg < 1:992477/93‑1 (MQ=255)
ccACACTTCCCAGCCCAGCCCCCAGGCACCCCGCGTCGGGGTTTCCCAGTTATCTTCCACGAAACAGATGTCGTCAATAATCGGGTCCATGcc > 2:6039824/1‑93 (MQ=255)
cacaCTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGccc > 1:5841874/1‑93 (MQ=255)
cacaCTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGcca < 1:2311917/93‑2 (MQ=255)
acacTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGcccc > 2:4336124/1‑92 (MQ=255)
acacTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCa < 2:5649868/93‑1 (MQ=255)
cTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGCTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGct > 1:5611525/1‑93 (MQ=255)
ttCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGctc < 1:2815993/93‑1 (MQ=255)
ccagcccagcCCCCAGGCACCCAGCGTCGGTTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGCTCttt < 2:2311464/93‑1 (MQ=255)
cagcccagccCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGCTCTTTc < 1:3242231/93‑1 (MQ=255)
agcccagcccCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGCTCTTTCa < 1:5902950/93‑1 (MQ=255)
gcccacCCCCCAGGCACCCAGCGTCGGTTTTCCCCAGTTATCTCCCACGAAACGGATGTCGTAAATAGTGGGGTCCATCCCCAGCTTTTTCag < 2:473789/93‑1 (MQ=255)
cccagCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGCTCTTTCaga < 2:9210/93‑1 (MQ=255)
|
GTAACCGGTTTACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGTCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGCTCTTTCAGAGA > NC_000913/3722469‑3722647
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCCGGTAACCGGTTTACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGTCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGCTCTTTCAGAGAACCG > NC_000913/3722465‑3722651
|
GCCGGTAACCGGTTTACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGC > SRR4302533.3335405/1‑94 (MQ=60)
GCCGGTAACCGGTTTACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGC > SRR4302533.3857281/1‑94 (MQ=60)
GGTAACCGGTTTACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCC > SRR4302533.5474699/1‑94 (MQ=60)
GGTAACCGGTTTACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCC > SRR4302533.4492051/1‑94 (MQ=60)
TAACCGGTTTACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCA < SRR4302533.3596265/94‑1 (MQ=60)
TAACCGGTTTACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCA < SRR4302533.2357443/94‑1 (MQ=60)
TAACCGGTTTACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCA < SRR4302533.3494469/94‑1 (MQ=60)
AACCGGTTTACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAG < SRR4302533.933547/94‑1 (MQ=60)
ACCGGTTTACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGG > SRR4302533.2506392/1‑94 (MQ=60)
GTTTACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACC < SRR4302533.2439839/94‑1 (MQ=60)
GTTTACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACC > SRR4302533.6182794/1‑94 (MQ=60)
TTTACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCC > SRR4302533.2241171/1‑94 (MQ=60)
TTACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCA > SRR4302533.4503632/1‑94 (MQ=60)
TTACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCA < SRR4302533.3224685/94‑1 (MQ=60)
TACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAG > SRR4302533.670756/1‑94 (MQ=60)
TACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAG > SRR4302533.1724962/1‑94 (MQ=60)
TACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAG > SRR4302533.5892859/1‑94 (MQ=60)
ACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGC < SRR4302533.6038871/94‑1 (MQ=60)
CACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCG > SRR4302533.6029529/1‑94 (MQ=60)
ACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGT > SRR4302533.2857387/1‑94 (MQ=60)
CTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTC < SRR4302533.5627609/94‑1 (MQ=60)
TCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCG < SRR4302533.732046/94‑1 (MQ=60)
TCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCG < SRR4302533.1569699/94‑1 (MQ=60)
CCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGG < SRR4302533.386338/94‑1 (MQ=60)
CCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGG > SRR4302533.519141/1‑94 (MQ=60)
CCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGG < SRR4302533.5713361/94‑1 (MQ=60)
CAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGG > SRR4302533.5727482/1‑94 (MQ=60)
CAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGG > SRR4302533.6178361/1‑94 (MQ=60)
CAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGG < SRR4302533.2434355/94‑1 (MQ=60)
CAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGG > SRR4302533.24071/1‑94 (MQ=60)
CAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGG > SRR4302533.1609036/1‑94 (MQ=60)
AGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGT > SRR4302533.3500497/1‑94 (MQ=60)
GACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTT < SRR4302533.1622498/94‑1 (MQ=60)
GACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTT < SRR4302533.1108464/94‑1 (MQ=60)
GACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTT < SRR4302533.4840442/94‑1 (MQ=60)
GACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGGT > SRR4302533.3517192/1‑94 (MQ=60)
ACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGctc > SRR4302533.4165196/1‑91 (MQ=60)
ACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTT < SRR4302533.3628571/94‑1 (MQ=60)
ACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTT > SRR4302533.4165195/1‑94 (MQ=60)
ACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTT < SRR4302533.958080/94‑1 (MQ=60)
CCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGGTTT > SRR4302533.3240848/1‑94 (MQ=60)
CACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTC > SRR4302533.1020672/1‑94 (MQ=60)
CACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTC < SRR4302533.2451931/94‑1 (MQ=60)
CACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTC > SRR4302533.1771637/1‑94 (MQ=60)
CAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCA > SRR4302533.2555213/1‑94 (MQ=60)
CAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCA > SRR4302533.5577185/1‑94 (MQ=60)
AACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAG < SRR4302533.6103998/94‑1 (MQ=60)
AACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAG > SRR4302533.4490214/1‑94 (MQ=60)
AACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAG < SRR4302533.5471285/94‑1 (MQ=60)
CTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTA > SRR4302533.5352246/1‑94 (MQ=60)
TGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTAT < SRR4302533.3960075/94‑1 (MQ=60)
TGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTAT < SRR4302533.6149238/94‑1 (MQ=60)
GCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATC < SRR4302533.4368423/94‑1 (MQ=60)
GCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATC > SRR4302533.1055217/1‑94 (MQ=60)
TGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTT > SRR4302533.4367377/1‑94 (MQ=60)
GGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTC > SRR4302533.3255357/1‑94 (MQ=60)
GAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCC < SRR4302533.4281997/94‑1 (MQ=60)
AAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCA < SRR4302533.243348/94‑1 (MQ=60)
AGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCAC > SRR4302533.369065/1‑94 (MQ=60)
TAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGA > SRR4302533.1674783/1‑94 (MQ=60)
AAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAA < SRR4302533.4867897/94‑1 (MQ=60)
AAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAA > SRR4302533.2096881/1‑94 (MQ=60)
AGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAA < SRR4302533.4411633/94‑1 (MQ=60)
AGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAA > SRR4302533.5604713/1‑94 (MQ=60)
GTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAAC < SRR4302533.5438270/94‑1 (MQ=60)
GTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAAC < SRR4302533.2268043/94‑1 (MQ=60)
TGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACG < SRR4302533.3953428/94‑1 (MQ=60)
ACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGAT < SRR4302533.4023962/94‑1 (MQ=60)
ACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGAT < SRR4302533.454935/94‑1 (MQ=60)
CTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATG > SRR4302533.2662759/1‑94 (MQ=60)
CGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCG < SRR4302533.2731903/94‑1 (MQ=60)
CGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCG > SRR4302533.4012864/1‑94 (MQ=60)
GTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGT > SRR4302533.5529638/1‑94 (MQ=60)
TCGCTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTG < SRR4302533.499576/94‑1 (MQ=60)
TCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTG > SRR4302533.2242804/1‑94 (MQ=60)
ACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAA > SRR4302533.2076259/1‑94 (MQ=60)
ACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAA > SRR4302533.5306840/1‑94 (MQ=60)
ACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAA > SRR4302533.4238022/1‑94 (MQ=60)
CTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAAT > SRR4302533.5741476/1‑94 (MQ=60)
CTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAAT > SRR4302533.3953804/1‑94 (MQ=60)
CTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAAT < SRR4302533.1635203/94‑1 (MQ=60)
CTTCCATGCCGTTCAGCCACACTTCCCACCCCAGCCCCCAGGCACCCAGCGTCGGGATTTCCCAGTTATCTTCCACGAAACGGATGTTGTGAAT > SRR4302533.405008/1‑94 (MQ=60)
TTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATA < SRR4302533.5143397/94‑1 (MQ=60)
TTCCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATA > SRR4302533.2418221/1‑94 (MQ=60)
CCATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGT < SRR4302533.1469025/94‑1 (MQ=60)
CATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTC > SRR4302533.5327523/1‑94 (MQ=60)
CATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTC < SRR4302533.243278/94‑1 (MQ=60)
CATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTC < SRR4302533.4781707/94‑1 (MQ=60)
CATGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTC < SRR4302533.3180546/94‑1 (MQ=60)
TGCCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGG > SRR4302533.6025246/1‑94 (MQ=60)
CCGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGT < SRR4302533.3155541/94‑1 (MQ=60)
CGTTCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTC < SRR4302533.3062632/94‑1 (MQ=60)
CGTTCAGCCACACTTCCCAGCCCAGCACCCAGGCACCCAGCGTCGGGGTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTC > SRR4302533.3245488/1‑94 (MQ=60)
TCAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCAT < SRR4302533.353875/94‑1 (MQ=60)
CAGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGACCATG > SRR4302533.600667/1‑94 (MQ=60)
AGCCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGC < SRR4302533.998279/94‑1 (MQ=60)
ACCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCC < SRR4302533.4696369/94‑1 (MQ=60)
CCACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCC > SRR4302533.5877195/1‑94 (MQ=60)
CACACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCAA < SRR4302533.2326239/94‑1 (MQ=60)
ACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGCT > SRR4302533.4326160/1‑94 (MQ=60)
ACTTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGCTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGCT > SRR4302533.5645442/1‑94 (MQ=60)
TTCCCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGCTCT < SRR4302533.2833330/94‑1 (MQ=60)
CCAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGCTCTTTC < SRR4302533.295858/94‑1 (MQ=60)
CAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGCTCTTTCA < SRR4302533.3262212/94‑1 (MQ=60)
CAGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGCTCTTTCA < SRR4302533.5415617/94‑1 (MQ=60)
AGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGCTCTTTCAG < SRR4302533.5938598/94‑1 (MQ=60)
AGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGCTCTTTCAG > SRR4302533.5735339/1‑94 (MQ=60)
AGCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGCTCTTTCAG < SRR4302533.3333272/94‑1 (MQ=60)
GCCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGCTCTTTCAGA < SRR4302533.5342870/94‑1 (MQ=60)
CCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGCTCTTTCAGAG < SRR4302533.5467377/94‑1 (MQ=60)
CCCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGCTCTTTCAGAG < SRR4302533.1900653/94‑1 (MQ=60)
CCAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGCTCTTTCAGAGA < SRR4302533.453999/94‑1 (MQ=60)
CAGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGCTCTTTCAGAGAA > SRR4302533.2600655/1‑94 (MQ=60)
AGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGCTCTTTCAGAGAAC > SRR4302533.2208561/1‑94 (MQ=60)
AGCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGCTCTTTCAGAGAAC < SRR4302533.2063480/94‑1 (MQ=60)
GCCCCCAGGCACCCAGCGTCGGGTTTTCCCAGGTATCTTCCACGAAACGGATGTCGTGAAGAGTCGGGTCCATGCCCAGCTTTTTCAGAaaatc > SRR4302533.3294172/1‑89 (MQ=60)
CCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGCTCTTTCAGAGAACCG > SRR4302533.2700674/1‑94 (MQ=60)
|
GCCGGTAACCGGTTTACACTCCAGACCACCAACCTGCTGGAAGTAAGTGAACTGCGTCACTTCCATGCCGTTCAGCCACACTTCCCAGCCCAGTCCCCAGGCACCCAGCGTCGGGTTTTCCCAGTTATCTTCCACGAAACGGATGTCGTGAATAGTCGGGTCCATGCCCAGCTCTTTCAGAGAACCG > NC_000913/3722465‑3722651
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
