Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,724,581 |
T→C |
Q137R (CAG→CGG) |
yiaA ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,724,581 | 0 | T | C | 99.7%
| 928.8
/ NA
| 289 | Q137R (CAG→CGG) | yiaA | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (150/138); minor base G (0/1); total (150/139) |
| Fisher's exact test for biased strand distribution p-value = 4.81e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 298 total aligned reads displayed.
AGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCA > NC_000913/3724491‑3724670
|
aaaCAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCgtgt > 2:5898535/1‑93 (MQ=255)
aaaCAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCgtgt < 2:4835383/93‑1 (MQ=255)
aaCAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGtt > 1:5828502/1‑93 (MQ=255)
aaCAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGtt > 1:5751669/1‑93 (MQ=255)
aaCAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGtt < 1:2576504/93‑1 (MQ=255)
aCAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGttt < 2:4174739/93‑1 (MQ=255)
aCAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGttt < 1:264406/93‑1 (MQ=255)
aGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCt < 2:6290805/93‑1 (MQ=255)
aGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCt < 2:5813645/93‑1 (MQ=255)
gATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCtt < 1:3251288/93‑1 (MQ=255)
ttAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCtttt < 1:4691293/93‑1 (MQ=255)
ttAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCtttt < 1:3533849/93‑1 (MQ=255)
gTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTtggt > 2:46854/1‑93 (MQ=255)
gTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTtggt > 1:1822906/1‑93 (MQ=255)
tGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTtggtg < 1:1966179/93‑1 (MQ=255)
tGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTtggtg < 2:5737591/93‑1 (MQ=255)
gAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTtggtgg > 1:5634520/1‑93 (MQ=255)
gAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTtggtgg > 1:3298676/1‑93 (MQ=255)
aGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTggg > 1:2938444/1‑93 (MQ=255)
gTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGt > 1:587188/1‑93 (MQ=255)
ttAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGtt < 2:4511859/93‑1 (MQ=255)
tAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGttt < 2:873912/93‑1 (MQ=255)
aaGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGtttt > 1:838351/1‑92 (MQ=255)
aaGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTa < 2:3857708/93‑1 (MQ=255)
aGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTAt < 2:3151010/93‑1 (MQ=255)
gTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTAtt < 2:2191646/93‑1 (MQ=255)
gTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTAtt < 1:4765411/93‑1 (MQ=255)
tAAAAGCCCGGTGACATTGGACTGAGCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCGGTGTTTCTTTTGGTGGGTTTATTc < 2:4419278/93‑1 (MQ=255)
aaaaGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTcc < 1:539580/93‑1 (MQ=255)
aaaaGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTcc < 1:5065644/93‑1 (MQ=255)
aaaGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCg < 1:1136514/93‑1 (MQ=255)
gCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCa > 2:5445071/1‑93 (MQ=255)
gCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGATTATTCAGGCa > 2:3975473/1‑93 (MQ=255)
cccGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCAt > 2:1745120/1‑93 (MQ=255)
ccGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATc > 2:5053619/1‑93 (MQ=255)
cGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCa > 2:274719/1‑93 (MQ=255)
gTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACg > 1:3940931/1‑93 (MQ=255)
gTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACg > 1:1459334/1‑93 (MQ=255)
tCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGCATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGa > 1:4973057/1‑93 (MQ=255)
caTTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAata < 2:5836893/93‑1 (MQ=255)
ttGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATAtt > 2:2321394/1‑93 (MQ=255)
gACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATAttttt < 2:296038/93‑1 (MQ=255)
gACTCACCGTGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATAttttt < 2:3722397/93‑1 (MQ=255)
aCTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTc < 2:4384080/93‑1 (MQ=255)
tGACCGTGCTTACGTGAGTTATTCGCTGTATTCTTCCTCGCTAACCCGTGTTTTTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTg < 2:4054866/93‑1 (MQ=255)
tGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTg > 1:683342/1‑93 (MQ=255)
tGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTg < 2:5601048/93‑1 (MQ=255)
gACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGc > 1:3686699/1‑93 (MQ=255)
gACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGc < 2:1950264/93‑1 (MQ=255)
aCCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCa > 1:6024589/1‑93 (MQ=255)
aCCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCa < 2:616363/93‑1 (MQ=255)
ccGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCAc < 1:4136738/93‑1 (MQ=255)
cGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCAcc < 2:462967/93‑1 (MQ=255)
cGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCAcc > 2:1127122/1‑93 (MQ=255)
cTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTa > 2:5186706/1‑93 (MQ=255)
cTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTa < 1:4389020/93‑1 (MQ=255)
cTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTa < 1:1037626/93‑1 (MQ=255)
cTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTa < 2:3652113/93‑1 (MQ=255)
tACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACt > 2:681888/1‑93 (MQ=255)
aCGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACtt > 2:1209025/1‑92 (MQ=255)
aCGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTg > 1:4509617/1‑93 (MQ=255)
aCGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTg < 2:81409/93‑1 (MQ=255)
gAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCAcc > 2:4903118/1‑93 (MQ=255)
gAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCAcc > 2:5639273/1‑93 (MQ=255)
aGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCa > 2:2524891/1‑93 (MQ=255)
gTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCaa > 1:4881477/1‑93 (MQ=255)
ttATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCaaa < 1:52241/93‑1 (MQ=255)
ttATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCaaa > 1:5524727/1‑93 (MQ=255)
ttATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCaaa > 1:5287470/1‑93 (MQ=255)
tATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAAc < 2:3068495/93‑1 (MQ=255)
tATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAAc > 2:2876409/1‑93 (MQ=255)
tATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAAc < 1:3038036/93‑1 (MQ=255)
tATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAAc < 1:2044573/93‑1 (MQ=255)
cTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCtt < 2:4992390/93‑1 (MQ=255)
tGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTAGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTa < 1:3855309/93‑1 (MQ=255)
gTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTaa < 1:2341046/93‑1 (MQ=255)
tATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTaag > 2:4309519/1‑93 (MQ=255)
tATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTaag > 2:3358595/1‑93 (MQ=255)
aTTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTaaga > 2:3478027/1‑93 (MQ=255)
aTTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTaaga < 1:4083918/93‑1 (MQ=255)
aTTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTaaga < 2:1449248/93‑1 (MQ=255)
ttcttcCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTaagaa < 2:4559426/93‑1 (MQ=255)
cttcCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAagaaga < 2:2423813/93‑1 (MQ=255)
cttcCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAagaaga > 1:743594/1‑93 (MQ=255)
cttcCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAagaaga < 1:164596/93‑1 (MQ=255)
ttcCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAgaagaa < 1:1902813/93‑1 (MQ=255)
tcCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGaaa < 1:962191/93‑1 (MQ=255)
tcCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGaaa < 1:2786930/93‑1 (MQ=255)
tcCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGaaa < 2:6227087/93‑1 (MQ=255)
tcCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGaaa > 2:2591370/1‑93 (MQ=255)
ccTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAg > 2:2018618/1‑93 (MQ=255)
cTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGc < 1:1290938/93‑1 (MQ=255)
tGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGcc < 1:5174276/93‑1 (MQ=255)
gggTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCa > 2:607278/1‑93 (MQ=255)
gggTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCa < 1:6199407/93‑1 (MQ=255)
gggTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCa > 1:2183545/1‑93 (MQ=255)
gTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGt < 2:3693835/93‑1 (MQ=255)
tAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTc < 1:4300240/93‑1 (MQ=255)
aaCCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTcc > 2:5255231/1‑93 (MQ=255)
aCCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCa > 1:4473251/1‑93 (MQ=255)
|
AGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCA > NC_000913/3724491‑3724670
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCATAAA > NC_000913/3724491‑3724674
|
AGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTG > SRR4302533.3044582/1‑94 (MQ=60)
AGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTG > SRR4302533.6017506/1‑94 (MQ=60)
AAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTT > SRR4302533.5786368/1‑94 (MQ=60)
AAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTT > SRR4302533.5863719/1‑94 (MQ=60)
AACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTT > SRR4302533.5854453/1‑94 (MQ=60)
AACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTT < SRR4302533.715873/94‑1 (MQ=60)
AACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTT < SRR4302533.649745/94‑1 (MQ=60)
AACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTT < SRR4302533.2592355/94‑1 (MQ=60)
ACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTC > SRR4302533.1444706/1‑94 (MQ=60)
ACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTC < SRR4302533.266012/94‑1 (MQ=60)
AGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTT > SRR4302533.3644304/1‑94 (MQ=60)
GATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTT < SRR4302533.3271336/94‑1 (MQ=60)
GATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTT < SRR4302533.4646644/94‑1 (MQ=60)
ATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTT < SRR4302533.1927730/94‑1 (MQ=60)
ATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTT < SRR4302533.5675257/94‑1 (MQ=60)
ATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTT < SRR4302533.980287/94‑1 (MQ=60)
TTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCTGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTG < SRR4302533.5235058/94‑1 (MQ=60)
TTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTG < SRR4302533.4719728/94‑1 (MQ=60)
TTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTG < SRR4302533.3555624/94‑1 (MQ=60)
TTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTG > SRR4302533.69961/1‑94 (MQ=60)
TAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGG > SRR4302533.80558/1‑94 (MQ=60)
TAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGG > SRR4302533.5033727/1‑94 (MQ=60)
TAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGG < SRR4302533.5295871/94‑1 (MQ=60)
TAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGG < SRR4302533.2301380/94‑1 (MQ=60)
AGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGT > SRR4302533.5583506/1‑94 (MQ=60)
AGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGT > SRR4302533.1834041/1‑94 (MQ=60)
GTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTG > SRR4302533.504607/1‑94 (MQ=60)
TGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGG < SRR4302533.1978194/94‑1 (MQ=60)
TGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGG > SRR4302533.2794014/1‑94 (MQ=60)
TGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGG > SRR4302533.3319031/1‑94 (MQ=60)
TGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGG > SRR4302533.5668591/1‑94 (MQ=60)
TGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGG < SRR4302533.1836678/94‑1 (MQ=60)
GAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGG > SRR4302533.2956399/1‑94 (MQ=60)
AGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGT < SRR4302533.2226555/94‑1 (MQ=60)
AGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGT > SRR4302533.590656/1‑94 (MQ=60)
AGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGT > SRR4302533.4542982/1‑94 (MQ=60)
AGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGT < SRR4302533.1282626/94‑1 (MQ=60)
AGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGT > SRR4302533.4760198/1‑94 (MQ=60)
TAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTT > SRR4302533.843261/1‑94 (MQ=60)
TAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTA > SRR4302533.326569/1‑94 (MQ=60)
AAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTAT < SRR4302533.493910/94‑1 (MQ=60)
GTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTC < SRR4302533.4794308/94‑1 (MQ=60)
GTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTC > SRR4302533.484465/1‑94 (MQ=60)
GTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTC > SRR4302533.4121244/1‑94 (MQ=60)
GTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTC < SRR4302533.3718523/94‑1 (MQ=60)
AAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCG < SRR4302533.5096240/94‑1 (MQ=60)
AAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCG < SRR4302533.542789/94‑1 (MQ=60)
AAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCG > SRR4302533.5575737/1‑94 (MQ=60)
AAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGCGTTATTCGCTGTATTCTTCCTGGGGAACCCGTGTTTCTCTTGGTGGGTTTATTCCGG > SRR4302533.1897421/1‑94 (MQ=60)
AAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGG < SRR4302533.1143273/94‑1 (MQ=60)
CCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATC > SRR4302533.2806297/1‑94 (MQ=60)
CCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCG > SRR4302533.6085706/1‑94 (MQ=60)
CCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCA > SRR4302533.5294118/1‑94 (MQ=60)
CCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCA > SRR4302533.1111217/1‑94 (MQ=60)
CGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCAC > SRR4302533.555312/1‑94 (MQ=60)
GGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACG > SRR4302533.2644962/1‑94 (MQ=60)
GGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACG > SRR4302533.4822770/1‑94 (MQ=60)
GGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACG > SRR4302533.1468130/1‑94 (MQ=60)
GGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACG > SRR4302533.3964980/1‑94 (MQ=60)
GGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACG > SRR4302533.1232668/1‑94 (MQ=60)
GTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGCATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGA > SRR4302533.5003211/1‑94 (MQ=60)
CACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGCTTCTTTTGGTGGGCTTCTTCCGGCATCACGAAT > SRR4302533.2191757/1‑94 (MQ=60)
ACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATA > SRR4302533.4789871/1‑94 (MQ=60)
ATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATT > SRR4302533.4455830/1‑94 (MQ=60)
ATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATT > SRR4302533.3299895/1‑94 (MQ=60)
ATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATT > SRR4302533.5422555/1‑94 (MQ=60)
ATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATT < SRR4302533.5827322/94‑1 (MQ=60)
ATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATT < SRR4302533.51925/94‑1 (MQ=60)
GGACTGACCGGGCTTGCGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTT < SRR4302533.3912502/94‑1 (MQ=60)
CTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTG > SRR4302533.687384/1‑94 (MQ=60)
TGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGC < SRR4302533.1437360/94‑1 (MQ=60)
TGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGC > SRR4302533.3709359/1‑94 (MQ=60)
GACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCA > SRR4302533.6061097/1‑94 (MQ=60)
ACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTTCGGCATTACGAATATTTTTCTGCAC > SRR4302533.4350756/1‑94 (MQ=60)
ACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCAC < SRR4302533.6312801/94‑1 (MQ=60)
CCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACC < SRR4302533.4161842/94‑1 (MQ=60)
CGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCG > SRR4302533.2026787/1‑94 (MQ=60)
CGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCG > SRR4302533.893709/1‑94 (MQ=60)
GGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGC > SRR4302533.916921/1‑94 (MQ=60)
GGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGC < SRR4302533.3121403/94‑1 (MQ=60)
GCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTA > SRR4302533.3283845/1‑94 (MQ=60)
CTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTAC < SRR4302533.1043726/94‑1 (MQ=60)
CTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTAC < SRR4302533.5511446/94‑1 (MQ=60)
CTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTAC < SRR4302533.4415518/94‑1 (MQ=60)
TTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACT > SRR4302533.2655866/1‑94 (MQ=60)
TTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACT < SRR4302533.2761946/94‑1 (MQ=60)
TACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTG > SRR4302533.4536929/1‑94 (MQ=60)
CGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCA > SRR4302533.5889650/1‑94 (MQ=60)
GTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCAC > SRR4302533.1954544/1‑94 (MQ=60)
TGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACC > SRR4302533.179384/1‑94 (MQ=60)
TGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACC > SRR4302533.3712650/1‑94 (MQ=60)
TGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACC > SRR4302533.4980016/1‑94 (MQ=60)
AGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAA > SRR4302533.4911051/1‑94 (MQ=60)
GTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAA > SRR4302533.5558080/1‑94 (MQ=60)
GTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAA > SRR4302533.5319138/1‑94 (MQ=60)
TTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAAC < SRR4302533.52594/94‑1 (MQ=60)
TTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAAC < SRR4302533.368909/94‑1 (MQ=60)
TATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACA < SRR4302533.2057175/94‑1 (MQ=60)
TATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACA < SRR4302533.4267091/94‑1 (MQ=60)
TATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACA > SRR4302533.6167803/1‑94 (MQ=60)
TATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACA < SRR4302533.3056625/94‑1 (MQ=60)
ATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAA > SRR4302533.2369723/1‑94 (MQ=60)
TGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAA > SRR4302533.3969604/1‑94 (MQ=60)
TGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTAGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAA < SRR4302533.3878851/94‑1 (MQ=60)
GTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAG < SRR4302533.2355539/94‑1 (MQ=60)
GTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAG < SRR4302533.4511424/94‑1 (MQ=60)
GTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAG > SRR4302533.5331632/1‑94 (MQ=60)
GTATTCCTCCTGGGTAACCCTTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAG < SRR4302533.2051199/94‑1 (MQ=60)
TATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGA > SRR4302533.3055794/1‑94 (MQ=60)
TATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGA < SRR4302533.1515816/94‑1 (MQ=60)
TATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGA < SRR4302533.2872212/94‑1 (MQ=60)
TATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGA > SRR4302533.392388/1‑94 (MQ=60)
ATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAA > SRR4302533.4225100/1‑94 (MQ=60)
ATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAA < SRR4302533.4108779/94‑1 (MQ=60)
TTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAG < SRR4302533.5871408/94‑1 (MQ=60)
TCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGA > SRR4302533.747970/1‑94 (MQ=60)
CTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAA < SRR4302533.165642/94‑1 (MQ=60)
CTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAA > SRR4302533.3324695/1‑94 (MQ=60)
TTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAA < SRR4302533.3462876/94‑1 (MQ=60)
TTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAA < SRR4302533.1914426/94‑1 (MQ=60)
TTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAA < SRR4302533.4138556/94‑1 (MQ=60)
TTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCAGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAA > SRR4302533.1816976/1‑94 (MQ=60)
TCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAG < SRR4302533.2081643/94‑1 (MQ=60)
TCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAG < SRR4302533.2804054/94‑1 (MQ=60)
TCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAG < SRR4302533.967844/94‑1 (MQ=60)
CCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGC > SRR4302533.6043479/1‑94 (MQ=60)
CCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGC > SRR4302533.1512674/1‑94 (MQ=60)
CTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCC < SRR4302533.1298714/94‑1 (MQ=60)
TGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCA > SRR4302533.435895/1‑94 (MQ=60)
TGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCA < SRR4302533.5716362/94‑1 (MQ=60)
TGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCA > SRR4302533.449258/1‑94 (MQ=60)
TGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCA > SRR4302533.4515410/1‑94 (MQ=60)
TGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCA < SRR4302533.818427/94‑1 (MQ=60)
TGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCA > SRR4302533.2197009/1‑94 (MQ=60)
TGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCA > SRR4302533.5253376/1‑94 (MQ=60)
TGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCA < SRR4302533.5205531/94‑1 (MQ=60)
GGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAG < SRR4302533.6236594/94‑1 (MQ=60)
GGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAG < SRR4302533.5183167/94‑1 (MQ=60)
GGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAG < SRR4302533.4103021/94‑1 (MQ=60)
TAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCC < SRR4302533.4326102/94‑1 (MQ=60)
AACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCA > SRR4302533.4500306/1‑94 (MQ=60)
ACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCAT < SRR4302533.2414393/94‑1 (MQ=60)
ACCCGTGTTTCTTTTGGTGGGGTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCAT > SRR4302533.3987532/1‑94 (MQ=60)
CCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCATA < SRR4302533.4679467/94‑1 (MQ=60)
CCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCATA < SRR4302533.5081640/94‑1 (MQ=60)
CCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCATAA > SRR4302533.884279/1‑94 (MQ=60)
CCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCATAA < SRR4302533.4826789/94‑1 (MQ=60)
CGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCATAAA > SRR4302533.6245536/1‑94 (MQ=60)
CGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCATAAA > SRR4302533.4400066/1‑94 (MQ=60)
CGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCATAAA > SRR4302533.5381787/1‑94 (MQ=60)
CGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCATAAA > SRR4302533.4825894/1‑94 (MQ=60)
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AGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCATAAA > NC_000913/3724491‑3724674
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
