Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,745,316 |
C→T |
I201I (ATC→ATT) |
lyxK → |
L‑xylulose kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,745,316 | 0 | C | T | 100.0%
| 976.6
/ NA
| 267 | I201I (ATC→ATT) | lyxK | L‑xylulose kinase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (154/113); total (154/113) |
Only 100 of 279 total aligned reads displayed.
AGGCTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATCGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGTCT > NC_000913/3745226‑3745405
|
ggCTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCt > 2:1156106/1‑93 (MQ=255)
ggCTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCt > 2:555802/1‑93 (MQ=255)
ggCTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCt < 1:210336/93‑1 (MQ=255)
ggCTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATAACCCGTGCCTCACCGACTGGCTGGGGATTGCt > 1:4625938/1‑93 (MQ=255)
tgAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCAACGAGTGGCTCGGGATTGCTgcagt > 2:5888131/1‑89 (MQ=255)
gAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAaatc > 2:2933804/1‑93 (MQ=255)
gagagCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCGCCGACTGGCTGGGGATTGCTGAaatcaat < 2:1525681/93‑1 (MQ=255)
gagagCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAaatcaat > 2:3345752/1‑93 (MQ=255)
gagagCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAaatcaat < 2:2363040/93‑1 (MQ=255)
agagCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAaatcaatc < 2:3972785/93‑1 (MQ=255)
agCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCAc > 1:3699817/1‑93 (MQ=255)
cAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGGCCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGc < 1:4404270/93‑1 (MQ=255)
cAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGc < 1:2517532/93‑1 (MQ=255)
atatTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGccc > 1:1961841/1‑93 (MQ=255)
atatTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGccc > 1:5512923/1‑93 (MQ=255)
tatTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCt > 1:2434110/1‑93 (MQ=255)
tatTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCt > 2:4539332/1‑93 (MQ=255)
tttCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGTGATTGCTTAAATCCATCACGCCCTgc > 2:5968600/1‑93 (MQ=255)
tttCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGGCCTgc > 2:6245343/1‑93 (MQ=255)
ttCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTgcc > 1:2037562/1‑93 (MQ=255)
cGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCTCCGACTGGCTGTGGCTTGCTGAAATCAAGCACGCCCTgccgcc > 1:3031515/1‑93 (MQ=255)
cGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTgccgcc < 2:3436887/93‑1 (MQ=255)
cGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTgccgcc > 1:4577462/1‑93 (MQ=255)
gAGTCCAACCTCTGCAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCt > 2:6050885/1‑93 (MQ=255)
gAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCt < 2:6098209/93‑1 (MQ=255)
gTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCtgt > 1:519531/1‑93 (MQ=255)
gTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCtgt > 1:4245603/1‑93 (MQ=255)
cccATCCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCtgtt < 2:5772810/92‑1 (MQ=255)
cAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCtgttgt < 1:5866517/93‑1 (MQ=255)
aaCCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTc > 2:5649160/1‑93 (MQ=255)
aaCCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTc > 2:3015668/1‑93 (MQ=255)
aaCCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTc > 1:335999/1‑93 (MQ=255)
aCCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCg > 2:2809548/1‑93 (MQ=255)
ctctACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGa < 2:5149992/93‑1 (MQ=255)
ctctACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGa < 1:2867287/93‑1 (MQ=255)
tctACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGAt > 2:2026927/1‑93 (MQ=255)
tctACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGAt > 1:4729455/1‑93 (MQ=255)
tACACCATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCt < 1:2268897/93‑1 (MQ=255)
tACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCt < 2:917327/93‑1 (MQ=255)
tACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCt > 1:506636/1‑93 (MQ=255)
caacaTGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGc < 2:1120059/93‑1 (MQ=255)
aacaTGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGcc < 2:3619246/93‑1 (MQ=255)
acaTGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGccc > 2:3280141/1‑92 (MQ=255)
caTGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGa > 2:4139469/1‑93 (MQ=255)
tGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGaaa > 1:1114556/1‑93 (MQ=255)
tGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGaaa < 2:2319614/93‑1 (MQ=255)
tGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGaaa > 2:1370650/1‑93 (MQ=255)
gAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAAt > 2:213831/1‑93 (MQ=255)
aGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATc < 2:5251020/93‑1 (MQ=255)
gTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCt < 2:3695266/93‑1 (MQ=255)
gTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCt > 1:5987085/1‑93 (MQ=255)
gTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCt < 2:785365/93‑1 (MQ=255)
tCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTg > 2:4395722/1‑93 (MQ=255)
cTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGc < 2:2079315/93‑1 (MQ=255)
ttGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCg > 1:4163305/1‑93 (MQ=255)
ttGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCg > 1:402498/1‑93 (MQ=255)
tGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCgg < 1:699594/93‑1 (MQ=255)
tGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCgg > 1:170408/1‑93 (MQ=255)
tGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCgg > 1:233253/1‑93 (MQ=255)
gggAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCgggg > 1:5536438/1‑93 (MQ=255)
ggAATGTGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCGTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGga < 1:325801/93‑1 (MQ=255)
ggAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGga < 1:2773791/93‑1 (MQ=255)
aaTATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGgaga < 1:1022210/93‑1 (MQ=255)
atatGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGCTCTGCCGAAATCTGCgggggggt > 2:1803284/1‑89 (MQ=255)
atatGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGAt < 1:2943669/93‑1 (MQ=255)
atatGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGAt > 1:1805503/1‑93 (MQ=255)
tatCACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATc < 2:2777866/93‑1 (MQ=255)
atGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCa > 2:544640/1‑93 (MQ=255)
tGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCAc > 2:4829229/1‑93 (MQ=255)
tGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCAc < 2:3267722/93‑1 (MQ=255)
cccGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGc > 1:2840653/1‑93 (MQ=255)
cccGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGc > 1:4866034/1‑93 (MQ=255)
cccGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGc < 1:689117/93‑1 (MQ=255)
cccGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGc < 2:3493965/93‑1 (MQ=255)
cGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTc > 2:3784260/1‑93 (MQ=255)
gTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCa < 2:3167570/93‑1 (MQ=255)
gCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGa < 1:5399844/93‑1 (MQ=255)
gCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGa > 2:4263956/1‑93 (MQ=255)
gCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGa < 2:1983104/93‑1 (MQ=255)
cTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGGTCACCGCTCCGaaa > 1:6284454/1‑91 (MQ=255)
tCACCGACTGGCTTGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAg < 1:895685/93‑1 (MQ=255)
tCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAg > 2:2225035/1‑93 (MQ=255)
cACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAgc < 2:2669820/93‑1 (MQ=255)
ccGACTGGCTAGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAgccg > 2:1580691/1‑93 (MQ=255)
gctggctggGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGccc < 1:5302557/92‑1 (MQ=255)
gctggctggGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGccc < 1:3764941/92‑1 (MQ=255)
ctggctggGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCt < 2:4725762/93‑1 (MQ=255)
atggctggTGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCt < 1:1558798/92‑1 (MQ=255)
tggctggGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTg > 1:3962637/1‑93 (MQ=255)
tggctggGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTg > 2:1242327/1‑93 (MQ=255)
ggctggGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCCGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGa < 2:1890545/93‑1 (MQ=255)
gctggGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGAc > 1:1286019/1‑93 (MQ=255)
ctggGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGAcc > 2:46213/1‑93 (MQ=255)
ctggGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGAcc < 1:1490708/93‑1 (MQ=255)
ctggGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGAcc > 1:4950276/1‑93 (MQ=255)
ggggATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCgg > 1:2712816/1‑93 (MQ=255)
ggggATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCgg > 1:3126296/1‑93 (MQ=255)
gggATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCggc > 1:3553930/1‑92 (MQ=255)
ggATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGTc < 1:2161936/93‑1 (MQ=255)
ggATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGTc > 1:3458764/1‑93 (MQ=255)
|
AGGCTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATCGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGTCT > NC_000913/3745226‑3745405
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAAAGGCTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATCGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGTCTGAAA > NC_000913/3745223‑3745409
|
CAAAGGCTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATT > SRR4302533.2114021/1‑94 (MQ=60)
CAAAGGCTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATT > SRR4302533.3698508/1‑94 (MQ=60)
CAAAGGCTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATT > SRR4302533.6212357/1‑94 (MQ=60)
AGGCTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATAACCCGTGCCTCACCGACTGGCTGGGGATTGCT > SRR4302533.4653975/1‑94 (MQ=60)
GGCTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTG < SRR4302533.211664/94‑1 (MQ=60)
GCTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGA > SRR4302533.5952841/1‑94 (MQ=60)
CTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAA > SRR4302533.2753251/1‑94 (MQ=60)
GAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCA > SRR4302533.227423/1‑94 (MQ=60)
AAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAA > SRR4302533.4097465/1‑94 (MQ=60)
AAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATAAA > SRR4302533.2766533/1‑94 (MQ=60)
AAGAGAGCAATATATCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAA > SRR4302533.3426695/1‑94 (MQ=60)
GAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATC < SRR4302533.644906/94‑1 (MQ=60)
GAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATC > SRR4302533.5616781/1‑94 (MQ=60)
GAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATC < SRR4302533.288348/94‑1 (MQ=60)
AGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCA < SRR4302533.2432273/94‑1 (MQ=60)
GAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCAC > SRR4302533.3722542/1‑94 (MQ=60)
GAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCAC > SRR4302533.5424161/1‑94 (MQ=60)
aatcaaccacaccaccccccaacaaaaaagtgttcttTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACG < SRR4302533.3228123/57‑1 (MQ=60)
GCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGC > SRR4302533.2792108/1‑94 (MQ=60)
CAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGGCCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCC < SRR4302533.4430864/94‑1 (MQ=60)
CAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCC < SRR4302533.2533045/94‑1 (MQ=60)
CAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCC > SRR4302533.1531478/1‑94 (MQ=60)
CAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCC < SRR4302533.4415710/94‑1 (MQ=60)
AATATTTCCGAGTTCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCC > SRR4302533.1973818/1‑94 (MQ=60)
AATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCC > SRR4302533.1973817/1‑94 (MQ=60)
AATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCC > SRR4302533.5546202/1‑94 (MQ=60)
AATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCC < SRR4302533.6119742/94‑1 (MQ=60)
ATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCT > SRR4302533.2449147/1‑94 (MQ=60)
ATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCT < SRR4302533.3161456/94‑1 (MQ=60)
ATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCT > SRR4302533.3683699/1‑94 (MQ=60)
TTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCC > SRR4302533.2050127/1‑94 (MQ=60)
TTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCG > SRR4302533.5480158/1‑94 (MQ=60)
TTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCC > SRR4302533.3936395/1‑94 (MQ=60)
CCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCTCCGACTGGCTGTGGCTTGCTGAAATCAAGCACGCCCTGCCGCC > SRR4302533.3050065/1‑94 (MQ=60)
CCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCC > SRR4302533.3050066/1‑94 (MQ=60)
CCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCC > SRR4302533.4605206/1‑94 (MQ=60)
CGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCT > SRR4302533.3234010/1‑94 (MQ=60)
CGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCT < SRR4302533.4076660/94‑1 (MQ=60)
AGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGT > SRR4302533.522618/1‑94 (MQ=60)
AGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGT > SRR4302533.421176/1‑94 (MQ=60)
AGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGT > SRR4302533.4271234/1‑94 (MQ=60)
TCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTG > SRR4302533.5073137/1‑94 (MQ=60)
CCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGT > SRR4302533.490174/1‑94 (MQ=60)
CAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTC > SRR4302533.338052/1‑94 (MQ=60)
CAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTC < SRR4302533.5028953/94‑1 (MQ=60)
CAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTC < SRR4302533.5901980/94‑1 (MQ=60)
AACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCG > SRR4302533.2912966/1‑94 (MQ=60)
ACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGG < SRR4302533.2300141/94‑1 (MQ=60)
ACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGG > SRR4302533.1990159/1‑94 (MQ=60)
CCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGA < SRR4302533.2059000/94‑1 (MQ=60)
CTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGAT > SRR4302533.4758127/1‑94 (MQ=60)
CTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGAT < SRR4302533.2884928/94‑1 (MQ=60)
TCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATC > SRR4302533.5275381/1‑94 (MQ=60)
CTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCT > SRR4302533.509644/1‑94 (MQ=60)
TACACCATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTG < SRR4302533.2282934/94‑1 (MQ=60)
CAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCC > SRR4302533.2468913/1‑94 (MQ=60)
AACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCG < SRR4302533.3325105/94‑1 (MQ=60)
ACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGA > SRR4302533.1512388/1‑94 (MQ=60)
ACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGA > SRR4302533.1578394/1‑94 (MQ=60)
ACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGA > SRR4302533.209435/1‑94 (MQ=60)
CATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAA > SRR4302533.5726589/1‑94 (MQ=60)
ATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAA > SRR4302533.1121165/1‑94 (MQ=60)
ATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAA > SRR4302533.616379/1‑94 (MQ=60)
ATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAA > SRR4302533.1180826/1‑94 (MQ=60)
TGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAAT > SRR4302533.336525/1‑94 (MQ=60)
TGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAAT < SRR4302533.1958196/94‑1 (MQ=60)
GAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATC < SRR4302533.816594/94‑1 (MQ=60)
GAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATC < SRR4302533.4880961/94‑1 (MQ=60)
AGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCT < SRR4302533.1869520/94‑1 (MQ=60)
AGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCT > SRR4302533.6023342/1‑94 (MQ=60)
AGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCT < SRR4302533.2157933/94‑1 (MQ=60)
GTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTG > SRR4302533.4411944/1‑94 (MQ=60)
CTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCG > SRR4302533.404923/1‑94 (MQ=60)
CTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCG > SRR4302533.4188529/1‑94 (MQ=60)
TTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGG > SRR4302533.171480/1‑94 (MQ=60)
TTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGG < SRR4302533.2368545/94‑1 (MQ=60)
TTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGG > SRR4302533.234694/1‑94 (MQ=60)
TTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGG < SRR4302533.376373/94‑1 (MQ=60)
TGGGGAATATGACCCGTGCCTCACCGACTTGCTGTGGATTGCTGAAATCAAGCTCGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGG < SRR4302533.641244/94‑1 (MQ=60)
TGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGG < SRR4302533.703736/94‑1 (MQ=60)
GGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGG > SRR4302533.5569868/1‑94 (MQ=60)
GGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGA > SRR4302533.1810629/1‑94 (MQ=60)
GGAATGTGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCGTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAG < SRR4302533.327787/94‑1 (MQ=60)
GGAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAG < SRR4302533.2790822/94‑1 (MQ=60)
GAATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGA < SRR4302533.1353656/94‑1 (MQ=60)
GATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGAT > SRR4302533.5553670/1‑94 (MQ=60)
AATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGAT < SRR4302533.1028219/94‑1 (MQ=60)
AATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGAT > SRR4302533.1816492/1‑94 (MQ=60)
ATATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATC < SRR4302533.2961637/94‑1 (MQ=60)
TATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCA > SRR4302533.34982/1‑94 (MQ=60)
ATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCAC > SRR4302533.5363332/1‑94 (MQ=60)
ATGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCAC > SRR4302533.288415/1‑94 (MQ=60)
ATGACCCGTCCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCAC < SRR4302533.940587/94‑1 (MQ=60)
TGACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACC < SRR4302533.1729200/94‑1 (MQ=60)
GACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCG < SRR4302533.2341363/94‑1 (MQ=60)
ACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACGGC > SRR4302533.4895523/1‑94 (MQ=60)
ACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGC > SRR4302533.2858137/1‑94 (MQ=60)
ACCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGC > SRR4302533.4895522/1‑94 (MQ=60)
CCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCT > SRR4302533.3021331/1‑94 (MQ=60)
CCCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCT < SRR4302533.693192/94‑1 (MQ=60)
CCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTC > SRR4302533.4043570/1‑94 (MQ=60)
CCGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTC > SRR4302533.881514/1‑94 (MQ=60)
CGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCA > SRR4302533.4229363/1‑94 (MQ=60)
CGTGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCA < SRR4302533.2560358/94‑1 (MQ=60)
TGCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGA > SRR4302533.5478545/1‑94 (MQ=60)
GCCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGAC < SRR4302533.5432291/94‑1 (MQ=60)
CCTCACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGGTCACCGCTCcgaaa > SRR4302533.6321955/1‑89 (MQ=60)
TCACCGACTGGCTTGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGC < SRR4302533.900946/94‑1 (MQ=60)
CACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCC > SRR4302533.1038042/1‑94 (MQ=60)
CACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCC > SRR4302533.3131256/1‑94 (MQ=60)
CACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCC < SRR4302533.1200859/94‑1 (MQ=60)
CACCGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCC > SRR4302533.396483/1‑94 (MQ=60)
CTACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCC < SRR4302533.4664485/94‑1 (MQ=60)
CGACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCC > SRR4302533.4645490/1‑94 (MQ=60)
GACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCC > SRR4302533.4442937/1‑94 (MQ=60)
GCTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCT < SRR4302533.5334325/94‑1 (MQ=60)
GCTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCT < SRR4302533.3788018/94‑1 (MQ=60)
ACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCT > SRR4302533.4794868/1‑94 (MQ=60)
ACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCT < SRR4302533.5219272/94‑1 (MQ=60)
ACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCT > SRR4302533.1426165/1‑94 (MQ=60)
ACTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCG > SRR4302533.702184/1‑94 (MQ=60)
CTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTG > SRR4302533.5967420/1‑94 (MQ=60)
CTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTG < SRR4302533.358620/94‑1 (MQ=60)
CTGGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTG > SRR4302533.3986778/1‑94 (MQ=60)
ATGGCTGGTGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTG < SRR4302533.1568184/94‑1 (MQ=60)
GGCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGAC > SRR4302533.1293756/1‑94 (MQ=60)
GCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACC > SRR4302533.2527658/1‑94 (MQ=60)
GCTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACC > SRR4302533.4980258/1‑94 (MQ=60)
CTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCG < SRR4302533.3769045/94‑1 (MQ=60)
CTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCG < SRR4302533.1499699/94‑1 (MQ=60)
CTGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCG < SRR4302533.4702310/94‑1 (MQ=60)
TGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGG > SRR4302533.2729474/1‑94 (MQ=60)
TGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGG > SRR4302533.2818127/1‑94 (MQ=60)
TGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGG > SRR4302533.3145513/1‑94 (MQ=60)
TGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGG > SRR4302533.2957444/1‑94 (MQ=60)
TGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGG < SRR4302533.3487051/94‑1 (MQ=60)
TGGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGG > SRR4302533.5230404/1‑94 (MQ=60)
GGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGT < SRR4302533.2211479/94‑1 (MQ=60)
GGGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGC > SRR4302533.3575826/1‑94 (MQ=60)
GGGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGTC > SRR4302533.3480117/1‑94 (MQ=60)
GGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGTCT < SRR4302533.2175241/94‑1 (MQ=60)
GGATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCGGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGTCT > SRR4302533.4468059/1‑94 (MQ=60)
GATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGTCTG > SRR4302533.2979043/1‑94 (MQ=60)
GATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGTCTG > SRR4302533.1116924/1‑94 (MQ=60)
ATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGTCTGA > SRR4302533.2290206/1‑94 (MQ=60)
ATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGTCTGA > SRR4302533.696122/1‑94 (MQ=60)
ATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGTCTGA > SRR4302533.5414541/1‑94 (MQ=60)
ATTGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGATCAGACAGCCGCCCTGACCGGTCTGA > SRR4302533.1168487/1‑94 (MQ=60)
TGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGTCTGAAA > SRR4302533.3431433/1‑94 (MQ=60)
|
CAAAGGCTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATCGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGTCTGAAA > NC_000913/3745223‑3745409
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
