Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,800,657 |
T→C |
E10G (GAG→GGG) |
rfaI ← |
UDP‑D‑galactose:(glucosyl)lipopolysaccharide‑ alpha‑1,3‑D‑galactosyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,800,657 | 0 | T | C | 100.0%
| 709.8
/ NA
| 217 | E10G (GAG→GGG) | rfaI | UDP‑D‑galactose:(glucosyl)lipopolysaccharide‑ alpha‑1,3‑D‑galactosyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (130/87); total (130/87) |
Only 100 of 220 total aligned reads displayed.
AGAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACTCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGATT > NC_000913/3800567‑3800746
|
aGAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCa < 2:2905661/93‑1 (MQ=255)
aGAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCa < 1:3606641/93‑1 (MQ=255)
gAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAg > 2:771597/1‑93 (MQ=255)
aaaGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTTTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGt < 1:4430165/93‑1 (MQ=255)
aaaGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTGTGATCATAATCAATAACTGAATTAAGAAACCCAGt < 2:1186223/93‑1 (MQ=255)
aaaGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGt < 2:1313121/93‑1 (MQ=255)
aaaGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGt > 2:4882893/1‑93 (MQ=255)
aaGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGtt < 1:4939189/93‑1 (MQ=255)
aaGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGtt < 1:2754113/93‑1 (MQ=255)
gTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTc > 2:2985981/1‑93 (MQ=255)
tttttGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTcc > 1:3742503/1‑93 (MQ=255)
tttttGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTAAGATCATAATCAATAACTGAATTAAGAAACCCAGTTTcc < 2:3900387/93‑1 (MQ=255)
tGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGa > 1:3556306/1‑93 (MQ=255)
tGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGa < 2:3292921/93‑1 (MQ=255)
tCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGaaa > 1:5734725/1‑93 (MQ=255)
cAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGaaaa > 2:3452385/1‑93 (MQ=255)
aGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAATCCAGTTTCCTGGaaaaa > 2:1975852/1‑93 (MQ=255)
aGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGaaaaa < 1:3337665/93‑1 (MQ=255)
gTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAac < 1:4537061/93‑1 (MQ=255)
ttCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAaca > 1:5675744/1‑93 (MQ=255)
tCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAacac < 2:3275710/93‑1 (MQ=255)
cATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACct > 1:4353989/1‑93 (MQ=255)
cATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACct > 1:5195918/1‑93 (MQ=255)
cATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACct > 2:3776294/1‑93 (MQ=255)
cATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACct < 2:4066629/93‑1 (MQ=255)
cATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACct > 1:1334507/1‑93 (MQ=255)
tAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACctgc < 2:741560/93‑1 (MQ=255)
gCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCtgctgc < 1:3960483/93‑1 (MQ=255)
gCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCtgctgc < 2:1069932/93‑1 (MQ=255)
gATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCat > 2:4386524/1‑93 (MQ=255)
gATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCat > 2:5811126/1‑93 (MQ=255)
tGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCatta > 2:2166309/1‑93 (MQ=255)
gTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCattat < 1:2622542/93‑1 (MQ=255)
tCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCattatt < 1:4681853/93‑1 (MQ=255)
ccAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTAttt > 1:1908779/1‑93 (MQ=255)
ccAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTAttt > 2:543428/1‑93 (MQ=255)
aGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTtcc > 1:5621281/1‑93 (MQ=255)
aGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTtcc > 2:832600/1‑93 (MQ=255)
aGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTtcc > 2:4936919/1‑93 (MQ=255)
aGACAAAGATTTTCTGTTTCTACCTTATGATCATAATCAATAACTGAATTAAGAAATCCAGTTTCCTGGAAAAACACCTGCTGCATTATTtcc > 2:5087510/1‑93 (MQ=255)
gACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTtcct > 2:4865930/1‑93 (MQ=255)
aCAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTtcctc < 1:5868478/93‑1 (MQ=255)
aCAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTtcctc < 1:1767956/93‑1 (MQ=255)
aCAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTtcctc < 1:836609/93‑1 (MQ=255)
cAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTtcctcc < 2:5037485/93‑1 (MQ=255)
cAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTtcctcc > 2:1636938/1‑93 (MQ=255)
aaaGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCg > 1:3485964/1‑93 (MQ=255)
aaGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCgg > 2:4191441/1‑93 (MQ=255)
aaGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCgg > 2:1174022/1‑93 (MQ=255)
aaGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCgg > 1:6279616/1‑93 (MQ=255)
aGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCggg < 1:2575575/93‑1 (MQ=255)
cTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGc > 1:1918260/1‑93 (MQ=255)
cTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGc > 1:5472153/1‑93 (MQ=255)
tGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCa > 1:6171368/1‑93 (MQ=255)
tttCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGa > 1:3258838/1‑93 (MQ=255)
tttCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGa > 1:2374573/1‑93 (MQ=255)
tCTACTTTCTGATCATAATAAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGaaa > 2:6160646/1‑93 (MQ=255)
tCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGaaa > 1:680864/1‑93 (MQ=255)
tCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGaaa < 2:4890512/93‑1 (MQ=255)
cTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAaat < 1:3938965/93‑1 (MQ=255)
cTACTTTATGATCATAATCAATAACTCAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGCAATAGCAGAaat > 2:3147635/1‑93 (MQ=255)
tACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAaata > 2:200941/1‑93 (MQ=255)
tACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAaata > 1:6087470/1‑93 (MQ=255)
aCTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAaataa < 1:1412491/93‑1 (MQ=255)
cTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAaataat > 2:4517009/1‑93 (MQ=255)
cTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAaataat < 1:2554740/93‑1 (MQ=255)
tttATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAAtt < 2:4334904/93‑1 (MQ=255)
tttATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAAtt > 1:1823910/1‑93 (MQ=255)
tttATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAAtt < 1:3940892/93‑1 (MQ=255)
tttATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAAtt > 1:3381806/1‑93 (MQ=255)
tttATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAAtt > 1:1224944/1‑93 (MQ=255)
ttATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTa < 2:5258598/93‑1 (MQ=255)
tATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTAc > 1:2503940/1‑93 (MQ=255)
aTGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTAcc > 1:5023491/1‑93 (MQ=255)
gATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCtt < 2:3315755/93‑1 (MQ=255)
aaTCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACGCCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCtt < 1:4107416/92‑1 (MQ=255)
aTCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTa > 2:1797275/1‑93 (MQ=255)
tCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTAt > 2:1259282/1‑93 (MQ=255)
tCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTAt < 1:5519467/93‑1 (MQ=255)
cATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATg > 2:2513784/1‑93 (MQ=255)
aTAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGt > 2:4718896/1‑93 (MQ=255)
aaTCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATTTat > 1:4841908/1‑92 (MQ=255)
aaTCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTaa > 1:2861525/1‑93 (MQ=255)
aaTCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTaa < 2:3503359/93‑1 (MQ=255)
aTCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAAt > 2:2754809/1‑93 (MQ=255)
aaTAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTa > 1:2542722/1‑93 (MQ=255)
aaTAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTa > 2:2610539/1‑93 (MQ=255)
tAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATc > 2:711475/1‑93 (MQ=255)
cTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTa < 1:1066796/93‑1 (MQ=255)
cTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTa < 1:2174223/93‑1 (MQ=255)
tGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTaa > 1:1210860/1‑93 (MQ=255)
gAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAAt < 2:2681727/93‑1 (MQ=255)
aaTTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATa < 1:1005414/93‑1 (MQ=255)
ttAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACt > 2:5736277/1‑93 (MQ=255)
ttAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACt > 2:3964087/1‑93 (MQ=255)
aaGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTc > 2:2355093/1‑93 (MQ=255)
gAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGa < 2:5702286/93‑1 (MQ=255)
aaaCCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGAt > 2:5633267/1‑93 (MQ=255)
aaaCCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGAt > 2:150162/1‑93 (MQ=255)
aaCCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGAtt < 2:5268908/93‑1 (MQ=255)
|
AGAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACTCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGATT > NC_000913/3800567‑3800746
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AATAGAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACTCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGATTGGTA > NC_000913/3800564‑3800750
|
AATAGAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACC < SRR4302533.5971713/94‑1 (MQ=60)
ATAGAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCC < SRR4302533.506939/94‑1 (MQ=60)
TAGAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCA < SRR4302533.1330342/94‑1 (MQ=60)
AGAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAG < SRR4302533.3628845/94‑1 (MQ=60)
GAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGCTTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAAACCAGT > SRR4302533.5015510/1‑94 (MQ=60)
AAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTTTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTT < SRR4302533.4456944/94‑1 (MQ=60)
AAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTT < SRR4302533.256832/94‑1 (MQ=60)
AAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTT > SRR4302533.4039471/1‑94 (MQ=60)
AAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTT < SRR4302533.4725145/94‑1 (MQ=60)
AAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTT < SRR4302533.4969090/94‑1 (MQ=60)
AAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTT > SRR4302533.4518197/1‑94 (MQ=60)
AAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTT < SRR4302533.2771004/94‑1 (MQ=60)
GTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCC > SRR4302533.3765457/1‑94 (MQ=60)
TTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGA > SRR4302533.3578224/1‑94 (MQ=60)
TGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAA > SRR4302533.1496224/1‑94 (MQ=60)
GTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAA > SRR4302533.5769343/1‑94 (MQ=60)
CAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAA > SRR4302533.6235364/1‑94 (MQ=60)
CAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAA < SRR4302533.4600868/94‑1 (MQ=60)
AGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAAC < SRR4302533.4313195/94‑1 (MQ=60)
AGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAAC < SRR4302533.3358293/94‑1 (MQ=60)
AGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAAA > SRR4302533.1822385/1‑94 (MQ=60)
GTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACA < SRR4302533.4564530/94‑1 (MQ=60)
GTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACA > SRR4302533.5710023/1‑94 (MQ=60)
TTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACAC > SRR4302533.1229850/1‑94 (MQ=60)
TCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACC < SRR4302533.2802025/94‑1 (MQ=60)
CCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCT > SRR4302533.5227253/1‑94 (MQ=60)
CCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCT > SRR4302533.1370797/1‑94 (MQ=60)
CCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCT > SRR4302533.4380268/1‑94 (MQ=60)
CCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCT > SRR4302533.1342516/1‑94 (MQ=60)
CATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTG < SRR4302533.3966210/94‑1 (MQ=60)
ATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGC > SRR4302533.3738278/1‑94 (MQ=60)
AAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTG < SRR4302533.2574685/94‑1 (MQ=60)
AGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGC > SRR4302533.1316838/1‑94 (MQ=60)
GCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCA < SRR4302533.3984614/94‑1 (MQ=60)
CGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCAT > SRR4302533.2655428/1‑94 (MQ=60)
ATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTA > SRR4302533.5530621/1‑94 (MQ=60)
GTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATT > SRR4302533.1064842/1‑94 (MQ=60)
GTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATT < SRR4302533.2638637/94‑1 (MQ=60)
TCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTT < SRR4302533.4710222/94‑1 (MQ=60)
TCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTT > SRR4302533.1920423/1‑94 (MQ=60)
CCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTC > SRR4302533.3684208/1‑94 (MQ=60)
CAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCC > SRR4302533.5655259/1‑94 (MQ=60)
CAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCC > SRR4302533.3341992/1‑94 (MQ=60)
AGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCT < SRR4302533.2608375/94‑1 (MQ=60)
ACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCC < SRR4302533.5903949/94‑1 (MQ=60)
ACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCC < SRR4302533.1778722/94‑1 (MQ=60)
ACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCC < SRR4302533.841511/94‑1 (MQ=60)
CAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCG > SRR4302533.3337341/1‑94 (MQ=60)
CAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCG > SRR4302533.3507462/1‑94 (MQ=60)
AAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGG > SRR4302533.6317102/1‑94 (MQ=60)
AAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGG < SRR4302533.6072156/94‑1 (MQ=60)
AGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGA < SRR4302533.2591420/94‑1 (MQ=60)
GATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTCAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAA > SRR4302533.5649655/1‑94 (MQ=60)
ATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAA > SRR4302533.3841965/1‑94 (MQ=60)
TCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGC > SRR4302533.6335720/1‑94 (MQ=60)
TCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGC > SRR4302533.5554909/1‑94 (MQ=60)
TCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGC > SRR4302533.1929969/1‑94 (MQ=60)
TCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGC > SRR4302533.5505130/1‑94 (MQ=60)
CTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCA > SRR4302533.6208454/1‑94 (MQ=60)
CTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCA > SRR4302533.2408312/1‑94 (MQ=60)
GTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGA > SRR4302533.2389269/1‑94 (MQ=60)
GTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGA > SRR4302533.3278940/1‑94 (MQ=60)
TTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAA > SRR4302533.684894/1‑94 (MQ=60)
TTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAA > SRR4302533.5378901/1‑94 (MQ=60)
CTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATA < SRR4302533.3963006/94‑1 (MQ=60)
CTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATA > SRR4302533.6124270/1‑94 (MQ=60)
ACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAAT < SRR4302533.1421032/94‑1 (MQ=60)
CTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATT > SRR4302533.1232285/1‑94 (MQ=60)
CTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATT > SRR4302533.3402681/1‑94 (MQ=60)
CTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATT < SRR4302533.2570456/94‑1 (MQ=60)
CTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATT > SRR4302533.1835055/1‑94 (MQ=60)
TTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTA > SRR4302533.1119876/1‑94 (MQ=60)
TTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTA < SRR4302533.3964940/94‑1 (MQ=60)
TTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTA < SRR4302533.3964939/94‑1 (MQ=60)
TTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTA < SRR4302533.299836/94‑1 (MQ=60)
TTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTAC > SRR4302533.858276/1‑94 (MQ=60)
TTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTAC > SRR4302533.2519378/1‑94 (MQ=60)
TATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACC > SRR4302533.5053914/1‑94 (MQ=60)
ATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCT > SRR4302533.13914/1‑94 (MQ=60)
ATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCT > SRR4302533.1916381/1‑94 (MQ=60)
ATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCT < SRR4302533.719946/94‑1 (MQ=60)
GATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTA < SRR4302533.2589967/94‑1 (MQ=60)
GATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTA < SRR4302533.5751693/94‑1 (MQ=60)
AATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACGCCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTA < SRR4302533.4132389/94‑1 (MQ=60)
ATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTAT < SRR4302533.5136181/94‑1 (MQ=60)
TCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATG > SRR4302533.1925020/1‑94 (MQ=60)
TCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATG < SRR4302533.5552792/94‑1 (MQ=60)
ATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTA > SRR4302533.6137544/1‑94 (MQ=60)
TAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATttat > SRR4302533.4871253/1‑90 (MQ=60)
TAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAA > SRR4302533.2879128/1‑94 (MQ=60)
TAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAA < SRR4302533.3582877/94‑1 (MQ=60)
TCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCT < SRR4302533.2556640/94‑1 (MQ=60)
CAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTA > SRR4302533.5868071/1‑94 (MQ=60)
CAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTA > SRR4302533.2558370/1‑94 (MQ=60)
AATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTAT > SRR4302533.4949850/1‑94 (MQ=60)
AATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTAT > SRR4302533.4920555/1‑94 (MQ=60)
ACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTA > SRR4302533.5699539/1‑94 (MQ=60)
CTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAA > SRR4302533.1218129/1‑94 (MQ=60)
CTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAA < SRR4302533.1073065/94‑1 (MQ=60)
CTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAA < SRR4302533.2187621/94‑1 (MQ=60)
TGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAAT > SRR4302533.3550763/1‑94 (MQ=60)
AATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATAC > SRR4302533.2172823/1‑94 (MQ=60)
AATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATAC > SRR4302533.4321810/1‑94 (MQ=60)
AATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATAC < SRR4302533.1011294/94‑1 (MQ=60)
AATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATAC < SRR4302533.4412128/94‑1 (MQ=60)
ATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACT < SRR4302533.2290760/94‑1 (MQ=60)
ATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACT > SRR4302533.2047382/1‑94 (MQ=60)
TTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTGCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTT > SRR4302533.3413457/1‑94 (MQ=60)
TTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTT > SRR4302533.3376940/1‑94 (MQ=60)
AAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGATT > SRR4302533.6143676/1‑94 (MQ=60)
AACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGATTG > SRR4302533.3746642/1‑94 (MQ=60)
ACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGATTGG < SRR4302533.665499/94‑1 (MQ=60)
CCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGATTGGTA > SRR4302533.151558/1‑94 (MQ=60)
|
AATAGAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACTCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGATTGGTA > NC_000913/3800564‑3800750
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
