Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,817,967 |
A→G |
D279D (GAT→GAC) |
yicF ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,817,967 | 0 | A | G | 100.0%
| 647.9
/ NA
| 204 | D279D (GAT→GAC) | yicF | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (81/123); total (81/123) |
Only 100 of 229 total aligned reads displayed.
AGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCATCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGTATACGTCT > NC_000913/3817877‑3818055
|
agtttGATTTTCCCAGCCCCCCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTc < 2:4311535/90‑1 (MQ=255)
aGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTc > 1:963167/1‑93 (MQ=255)
aGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTc > 1:1953406/1‑93 (MQ=255)
aGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTc > 1:5362073/1‑93 (MQ=255)
aGGTTGATATTCCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTc < 2:2758015/93‑1 (MQ=255)
ggTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCg > 2:926187/1‑93 (MQ=255)
gTTGATATTCCCAGCCCCCCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCgg < 2:1294860/93‑1 (MQ=255)
ttGATCTTTCAAGCCCCCCAGCCTCTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGt < 1:3504328/93‑1 (MQ=255)
ttGAGATTCCAACGCCACCAGCCCCTCTGCCGGGCCCGGGAGCAAATGGCGGGATTCTGGCTCTTTTGCCTCTCGTCCAACTCCGCCGTGGGt < 2:5410307/93‑1 (MQ=255)
gATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGa > 2:257278/1‑93 (MQ=255)
atatTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGGCGGTGag > 2:1133892/1‑92 (MQ=255)
atatTCCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGAc < 2:4943677/93‑1 (MQ=255)
tatTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACg > 1:3678752/1‑93 (MQ=255)
atTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGa > 1:2568098/1‑93 (MQ=255)
atTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGATCGTACAACTACGCCGTCGGTGACGa > 1:387448/1‑93 (MQ=255)
tttCCAGCCCTCCAGCCACTCTGCCTGGCCCGGTAGCCAATTGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGaa < 1:3091076/93‑1 (MQ=255)
tcccAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAg < 1:5754933/91‑1 (MQ=255)
tCCAGGCCCCCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAgg < 2:4182687/93‑1 (MQ=255)
tCCAGCCCCCCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAgg < 1:1316906/93‑1 (MQ=255)
aGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAgggga > 2:4706763/1‑91 (MQ=255)
aGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTa > 1:1860691/1‑93 (MQ=255)
ggCCCCCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTaa < 1:513225/93‑1 (MQ=255)
ggCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTaa < 1:6277230/93‑1 (MQ=255)
ggCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTaa > 2:4881098/1‑93 (MQ=255)
ccaccaGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGGTTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGGGACGCAGGGGAAtt > 2:3243619/1‑93 (MQ=255)
ccccaGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTc < 1:1097574/91‑1 (MQ=255)
caccaGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTc < 2:2762832/93‑1 (MQ=255)
caccaGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTc < 1:1469667/93‑1 (MQ=255)
aGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCt > 1:1003532/1‑93 (MQ=255)
gCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCtt > 2:4795723/1‑93 (MQ=255)
gCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCtt > 2:585755/1‑93 (MQ=255)
cACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTc < 2:1850774/93‑1 (MQ=255)
cctctGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTcc < 2:2176431/92‑1 (MQ=255)
ctGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTccacc > 1:3011503/1‑93 (MQ=255)
gCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGATTTCcaccac > 2:3927884/1‑93 (MQ=255)
tGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCa < 2:2631457/93‑1 (MQ=255)
tGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCCGTGACGAAGGGGAATTCCGCTTTCCACCACTCa > 1:5233352/1‑93 (MQ=255)
gCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGCAATTCCGCTTTTCACCACTCAtt > 2:4920545/1‑93 (MQ=255)
cccGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTCATTCCGCTTTCCACCACTCATTg > 1:639725/1‑93 (MQ=255)
cccGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTg < 1:2384484/93‑1 (MQ=255)
cggatAGGCAATGGTGGGATTCTGGCTTTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGc < 2:1927157/89‑1 (MQ=255)
ccGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGc > 1:4977454/1‑93 (MQ=255)
cGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCg > 1:2228421/1‑93 (MQ=255)
ggTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGt > 2:2480377/1‑93 (MQ=255)
gTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTa < 1:5021179/93‑1 (MQ=255)
gTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTa < 2:699337/93‑1 (MQ=255)
aGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGGAATTCCGCTTTCCACCACTCATTGCGTAcg > 2:1210543/1‑93 (MQ=255)
gCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTAcgc > 1:460712/1‑93 (MQ=255)
gCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTAcgc > 2:1707725/1‑93 (MQ=255)
ccAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTAcgcg > 1:4810733/1‑93 (MQ=255)
ccAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTAcgcg < 2:6156232/93‑1 (MQ=255)
aaTGGCGGGATTCTGGCCCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTAcccgcg > 1:168031/1‑93 (MQ=255)
aTGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGGAATTTCGGTTTCCACCACTCATTGCGTACgcgcgc > 2:2741162/1‑93 (MQ=255)
tGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCa > 1:6112276/1‑93 (MQ=255)
gCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAAc < 2:3983524/93‑1 (MQ=255)
gCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAAc < 1:2439851/93‑1 (MQ=255)
cGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACt < 2:2286438/93‑1 (MQ=255)
gATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTtca < 1:2612/93‑1 (MQ=255)
gATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGGAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTtct > 2:5795306/1‑92 (MQ=255)
ttCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTtcatc < 1:6257753/93‑1 (MQ=255)
ttCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTtcatc < 2:3226058/93‑1 (MQ=255)
ttCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTtcatc < 2:5936026/93‑1 (MQ=255)
ttCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTtcatc < 2:879379/93‑1 (MQ=255)
tgtctctTTCGCCGCTCGTCCAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGc < 1:5771530/90‑1 (MQ=255)
gtctctTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCa < 2:147699/91‑1 (MQ=255)
ggCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCa < 1:5828091/93‑1 (MQ=255)
ggCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCa > 1:4726126/1‑93 (MQ=255)
gCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCAt < 2:1761211/93‑1 (MQ=255)
gCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCAt < 2:3654959/93‑1 (MQ=255)
tctTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCAttt > 1:4045687/1‑93 (MQ=255)
ctTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCAtttt > 1:228555/1‑93 (MQ=255)
ctTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCAtttt < 2:960683/93‑1 (MQ=255)
tCGCCGCTCGTGTAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCa < 2:443654/93‑1 (MQ=255)
tCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCa < 2:3521382/93‑1 (MQ=255)
tCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCa > 1:3221770/1‑93 (MQ=255)
cgccgcTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCAc < 1:78538/93‑1 (MQ=255)
gccgcTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCAcc > 1:3097712/1‑93 (MQ=255)
gccgcTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCAcc < 2:5718296/93‑1 (MQ=255)
ccgcTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCg < 1:2502670/93‑1 (MQ=255)
cgcTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGc < 1:2882397/93‑1 (MQ=255)
cTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCAc < 1:624096/93‑1 (MQ=255)
cTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCAc < 2:1501533/93‑1 (MQ=255)
cTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCAc < 2:1969376/93‑1 (MQ=255)
cTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCAc > 2:4993692/1‑93 (MQ=255)
tCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACg < 1:4832965/93‑1 (MQ=255)
tCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACg > 2:2121799/1‑93 (MQ=255)
tCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACg < 2:5527171/93‑1 (MQ=255)
gTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACggg < 2:5611367/93‑1 (MQ=255)
tACAACTACGCCGTCGGTGACGAAGGGTAATTCCGTTTTCCGCCACTCATGGCGTACGCGCGTACCTTCATCGGCATTCTTCCCCGCACggtt < 2:2037938/93‑3 (MQ=255)
tACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGt < 1:4117713/93‑1 (MQ=255)
tACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGt < 1:6227662/93‑1 (MQ=255)
tACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGt > 1:5082798/1‑93 (MQ=255)
tACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGt > 1:4850465/1‑93 (MQ=255)
tACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGt < 1:4296834/93‑1 (MQ=255)
aCAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGta < 1:3384312/93‑1 (MQ=255)
aCTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGTATAc < 2:5369229/93‑1 (MQ=255)
aCTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGTATAc < 2:3573237/93‑1 (MQ=255)
aCTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGTATAc < 1:3809693/93‑1 (MQ=255)
aCGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGTATACGTc < 2:3268136/93‑1 (MQ=255)
aCGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGTATACGTc < 2:3092670/93‑1 (MQ=255)
|
AGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCATCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGTATACGTCT > NC_000913/3817877‑3818055
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCATCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGTATACGTCTGCGT > NC_000913/3817875‑3818059
|
ACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGT > SRR4302533.4704873/1‑94 (MQ=60)
CAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTC > SRR4302533.968825/1‑94 (MQ=60)
CAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTC > SRR4302533.1965311/1‑94 (MQ=60)
CAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTC > SRR4302533.5394278/1‑94 (MQ=60)
AGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCG > SRR4302533.2622469/1‑94 (MQ=60)
TTGATCTTTCAAGCCCCCCAGCCTCTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTG < SRR4302533.3525931/94‑1 (MQ=60)
TGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACCACTACGCCGTCGGTGA > SRR4302533.4254096/1‑94 (MQ=60)
TGATATTCCCAGGCCCCCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGA < SRR4302533.4667489/94‑1 (MQ=60)
ATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACG > SRR4302533.3701365/1‑94 (MQ=60)
TATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGA > SRR4302533.2583902/1‑94 (MQ=60)
TATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGATCGTACAACTACGCCGTCGGTGACGA > SRR4302533.389784/1‑94 (MQ=60)
TTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAG > SRR4302533.2703991/1‑94 (MQ=60)
TTTCCAGCCCTCCAGCCACTCTGCCTGGCCCGGTAGCCAATTGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAG < SRR4302533.3110080/94‑1 (MQ=60)
TTTCCAGCCCCCCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAG < SRR4302533.6258264/94‑1 (MQ=60)
TTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGG < SRR4302533.521644/94‑1 (MQ=60)
TCCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGG < SRR4302533.5789656/94‑1 (MQ=60)
TCCAGCCCCCCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGG < SRR4302533.1324807/94‑1 (MQ=60)
CCAGCCCCCCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGT < SRR4302533.4503145/94‑1 (MQ=60)
CAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTA > SRR4302533.1089989/1‑94 (MQ=60)
CAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTA > SRR4302533.1872038/1‑94 (MQ=60)
GGCCCCCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAAT < SRR4302533.516275/94‑1 (MQ=60)
GCCCACCAGCCCCTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAAT < SRR4302533.6314710/94‑1 (MQ=60)
GCCCCCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATT < SRR4302533.4846637/94‑1 (MQ=60)
GCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATT < SRR4302533.3061074/94‑1 (MQ=60)
CCCCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCC < SRR4302533.1104074/94‑1 (MQ=60)
CCCCAGCCACGCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCC < SRR4302533.2405425/94‑1 (MQ=60)
CACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCC < SRR4302533.1478525/94‑1 (MQ=60)
ACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCG > SRR4302533.3111684/1‑94 (MQ=60)
CAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCT > SRR4302533.1009398/1‑94 (MQ=60)
CAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTCTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCT > SRR4302533.3351615/1‑94 (MQ=60)
CAGCCACTCTGCCTGGCCCGCTAGCCAATGGCGGGATTCTGGCTCTTTCTCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGGAATTCCGCT > SRR4302533.554530/1‑94 (MQ=60)
GCCACTCTGCCTGGGCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTT < SRR4302533.5287118/94‑1 (MQ=60)
GCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCTCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTT > SRR4302533.1680529/1‑94 (MQ=60)
CACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCC > SRR4302533.6070961/1‑94 (MQ=60)
TCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACC > SRR4302533.2652257/1‑94 (MQ=60)
TCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACC > SRR4302533.3029928/1‑94 (MQ=60)
TGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCAC < SRR4302533.86272/94‑1 (MQ=60)
tgCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTGTCGCCGCTCGTACAACTACCCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACT < SRR4302533.232297/92‑1 (MQ=60)
GCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACT > SRR4302533.4698990/1‑94 (MQ=60)
GCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACT < SRR4302533.2577932/94‑1 (MQ=60)
GCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACT < SRR4302533.3233704/94‑1 (MQ=60)
CTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCCGTGACGAAGGGGAATTCCGCTTTCCACCACTCA > SRR4302533.5264824/1‑94 (MQ=60)
GGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCAT < SRR4302533.5118749/94‑1 (MQ=60)
GCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTCATTCCGCTTTCCACCACTCATTG > SRR4302533.643489/1‑94 (MQ=60)
CCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGC > SRR4302533.5007635/1‑94 (MQ=60)
CCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGC < SRR4302533.2399222/94‑1 (MQ=60)
CCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCG > SRR4302533.2242174/1‑94 (MQ=60)
CCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCG > SRR4302533.6286665/1‑94 (MQ=60)
CCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCG > SRR4302533.3496889/1‑94 (MQ=60)
GTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTAC < SRR4302533.5051588/94‑1 (MQ=60)
TAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACG > SRR4302533.3858266/1‑94 (MQ=60)
AGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGC > SRR4302533.463463/1‑94 (MQ=60)
GCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCG > SRR4302533.4839891/1‑94 (MQ=60)
CCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGC > SRR4302533.5845642/1‑94 (MQ=60)
CAATGGCGGGATTCTGGCCCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACCCGCG > SRR4302533.169092/1‑94 (MQ=60)
ATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCA > SRR4302533.6149167/1‑94 (MQ=60)
GGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAAC < SRR4302533.1895120/94‑1 (MQ=60)
GCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACT < SRR4302533.2454919/94‑1 (MQ=60)
CGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTT > SRR4302533.1568372/1‑94 (MQ=60)
CGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTT < SRR4302533.1433949/94‑1 (MQ=60)
GGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTC < SRR4302533.3628747/94‑1 (MQ=60)
GATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGCCGAAAGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCCACTTCAT < SRR4302533.6347860/94‑1 (MQ=60)
GATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCAT < SRR4302533.5790254/94‑1 (MQ=60)
GATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCAT < SRR4302533.2631/94‑1 (MQ=60)
GATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCAT > SRR4302533.620472/1‑94 (MQ=60)
ATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATC > SRR4302533.6295574/1‑94 (MQ=60)
ATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACAACTCATTGCGTACGCGCGCAccttgata > SRR4302533.4868298/1‑86 (MQ=60)
TTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCA < SRR4302533.6295175/94‑1 (MQ=60)
TTCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCA < SRR4302533.4083192/94‑1 (MQ=60)
TCTGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAG < SRR4302533.4812681/94‑1 (MQ=60)
TGTCTCTTTCGCCGCTCGTCCAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCA < SRR4302533.5806379/94‑1 (MQ=60)
TGGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCA > SRR4302533.4754781/1‑94 (MQ=60)
GGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCAT > SRR4302533.5059229/1‑94 (MQ=60)
GGCTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCAT < SRR4302533.5863308/94‑1 (MQ=60)
CTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTT > SRR4302533.4070308/1‑94 (MQ=60)
CTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTT < SRR4302533.2502958/94‑1 (MQ=60)
CTCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTT < SRR4302533.5011025/94‑1 (MQ=60)
TCTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTT > SRR4302533.229974/1‑94 (MQ=60)
CTTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCAATCATTGCGTACGCGCGGAACTTCATCAGAATTTTT > SRR4302533.5141345/1‑94 (MQ=60)
TTTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTC < SRR4302533.6273067/94‑1 (MQ=60)
TTCGCCGCTCGTACAACTACGCTGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCA < SRR4302533.1648633/94‑1 (MQ=60)
TTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCA > SRR4302533.3791868/1‑94 (MQ=60)
TTCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCA > SRR4302533.3241639/1‑94 (MQ=60)
TCGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCAC > SRR4302533.2095413/1‑94 (MQ=60)
CGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACC < SRR4302533.4893864/94‑1 (MQ=60)
CGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACC < SRR4302533.79042/94‑1 (MQ=60)
CGCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACC > SRR4302533.3116757/1‑94 (MQ=60)
GCCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCG < SRR4302533.1241939/94‑1 (MQ=60)
CCGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGC < SRR4302533.2518104/94‑1 (MQ=60)
CGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCA < SRR4302533.2900127/94‑1 (MQ=60)
CGCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCA > SRR4302533.3143194/1‑94 (MQ=60)
GCTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCAC < SRR4302533.3020194/94‑1 (MQ=60)
CTCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACG < SRR4302533.627758/94‑1 (MQ=60)
TCGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGG < SRR4302533.4862257/94‑1 (MQ=60)
CGTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGG < SRR4302533.705886/94‑1 (MQ=60)
GTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGT > SRR4302533.5113519/1‑94 (MQ=60)
GTACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGT > SRR4302533.4879860/1‑94 (MQ=60)
TACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGTA < SRR4302533.5642561/94‑1 (MQ=60)
TACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGTA < SRR4302533.3614059/94‑1 (MQ=60)
TACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGTA < SRR4302533.6264971/94‑1 (MQ=60)
TACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGTA < SRR4302533.4142724/94‑1 (MQ=60)
TACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGTA < SRR4302533.4322674/94‑1 (MQ=60)
ACAACTACGCCGTCGGTGACGAAGGTTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGTAT < SRR4302533.2183942/94‑1 (MQ=60)
ACAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGTAT < SRR4302533.3405207/94‑1 (MQ=60)
CAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGTATA < SRR4302533.1703059/94‑1 (MQ=60)
CAACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGTATA < SRR4302533.495623/94‑1 (MQ=60)
AACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGTATAC > SRR4302533.4134858/1‑94 (MQ=60)
ACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGTATACG < SRR4302533.6299316/94‑1 (MQ=60)
ACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGTATACG < SRR4302533.3832997/94‑1 (MQ=60)
ACTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGTATACG < SRR4302533.2246493/94‑1 (MQ=60)
CTACGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGTATACGT < SRR4302533.3999789/94‑1 (MQ=60)
CGCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGTATACGTCTG < SRR4302533.2481625/94‑1 (MQ=60)
GCCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGGATTTTTCACCGCACGGGCATACGTCTGC > SRR4302533.2723706/1‑94 (MQ=60)
CCGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGTATACGTCTGCG < SRR4302533.732747/94‑1 (MQ=60)
CGTCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGTATACGTCTGCGT > SRR4302533.4381693/1‑94 (MQ=60)
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ACAGGTTGATATTTCCAGGCCACCAGCCACTCTGCCTGGCCCGGTAGCCAATGGCGGGATTCTGGCTCTTTCGCCGCTCGTACAACTACGCCATCGGTGACGAAGGGTAATTCCGCTTTCCACCACTCATTGCGTACGCGCGCAACTTCATCAGCATTTTTCACCGCACGGGTATACGTCTGCGT > NC_000913/3817875‑3818059
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
