Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,863,429 |
T→C |
M158V (ATG→GTG) |
yidE ← |
putative transport protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,863,429 | 0 | T | C | 100.0%
| 702.9
/ NA
| 216 | M158V (ATG→GTG) | yidE | putative transport protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (122/94); total (122/94) |
Only 100 of 225 total aligned reads displayed.
TCTCGACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCATCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCGCAC > NC_000913/3863339‑3863518
|
tctcGACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCAccc > 2:4012951/1‑93 (MQ=255)
ctcGACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCAcccc > 2:5738190/1‑93 (MQ=255)
tcGACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACcccc < 2:4470087/93‑1 (MQ=255)
cGACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCa < 2:5183373/93‑1 (MQ=255)
gACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCAt > 1:2733441/1‑93 (MQ=255)
aCATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATc > 2:4055427/1‑93 (MQ=255)
aTTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTATCTCACCCCCATCTg > 1:4799291/1‑93 (MQ=255)
aTTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTg < 1:5945911/93‑1 (MQ=255)
aTTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTg > 2:1598966/1‑93 (MQ=255)
aTTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTg > 1:1588332/1‑93 (MQ=255)
ttGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGa < 2:2754795/93‑1 (MQ=255)
ttGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGa > 1:5011364/1‑93 (MQ=255)
tGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGAt > 2:4252818/1‑93 (MQ=255)
tGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGAt > 2:5542760/1‑93 (MQ=255)
cgcgGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCAGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGa > 1:3378980/1‑93 (MQ=255)
gcgGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGAc < 2:2742796/93‑1 (MQ=255)
gggAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGAcc < 1:2552105/92‑1 (MQ=255)
ggAAAATAACCCGCTACATCCAAATGGTGAACAAAACCCCGCAAATGCCGAATCGATACTCCATCGCTTAACTCACCCCCATCTGAACGTCCa < 2:1440299/93‑1 (MQ=255)
gAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCAt > 1:1046293/1‑93 (MQ=255)
aaaaTAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCAtt < 2:6254787/93‑1 (MQ=255)
aaaTAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCAttt > 1:2691496/1‑93 (MQ=255)
aaTAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTc > 2:4800054/1‑93 (MQ=255)
aaTAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTc > 2:2324444/1‑93 (MQ=255)
aaTAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTAACCCCCCTCTGATCGACCATTTc > 2:5884250/1‑93 (MQ=255)
aTAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTcc < 2:3079406/93‑1 (MQ=255)
aTAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTcc < 2:2404791/93‑1 (MQ=255)
aTAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTcc > 2:5599656/1‑93 (MQ=255)
tAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCa > 1:239095/1‑93 (MQ=255)
tAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCa > 2:627189/1‑93 (MQ=255)
aCCCGCAACATCCACATGGTGAGCAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCAtt < 1:221516/93‑1 (MQ=255)
cccGCAACATCCACATGGTGAACAAAATTCCGCAAATGCCGAATGGATATGCCATCGCGTAGCTCACCCCCATCTGATCGACCATTTCCATTg > 2:1879287/1‑93 (MQ=255)
cccGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTg < 1:883342/93‑1 (MQ=255)
ccGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTgg > 1:754253/1‑93 (MQ=255)
cGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGgt < 2:642531/93‑1 (MQ=255)
cGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGgt < 1:1399955/93‑1 (MQ=255)
gCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGgtg > 2:138641/1‑93 (MQ=255)
aCATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCCGATCGACCATTTCCATTGGTGTAc < 1:580735/93‑1 (MQ=255)
aCATCCACACGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTAc > 2:5654414/1‑93 (MQ=255)
cATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTAcc > 2:2801358/1‑93 (MQ=255)
cATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTACATTGGTGTAcc > 2:3254558/1‑93 (MQ=255)
aTCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTAccc > 1:4037491/1‑93 (MQ=255)
tCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTAcccg > 1:5695833/1‑92 (MQ=255)
tCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCa > 1:472826/1‑93 (MQ=255)
tCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCa > 1:6092330/1‑93 (MQ=255)
tCCACATGGGGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCCACCATTTCCATTGGCGTCCCCa > 2:1751444/1‑93 (MQ=255)
ccACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAg > 2:4613279/1‑93 (MQ=255)
ccACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAg < 1:3329565/93‑1 (MQ=255)
cacaTGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAgg > 1:3005288/1‑93 (MQ=255)
acaTGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGt < 2:2788779/93‑1 (MQ=255)
acaTGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGt < 1:6218527/93‑1 (MQ=255)
aTGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTcg > 2:4524606/1‑93 (MQ=255)
tGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTcgc > 1:2163525/1‑93 (MQ=255)
tGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTcgc > 1:1217/1‑93 (MQ=255)
ggTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTcgcg > 1:1191114/1‑93 (MQ=255)
gAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCaa < 2:2233214/93‑1 (MQ=255)
aCAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTTGCGCaaaa > 2:1641226/1‑93 (MQ=255)
aCAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCaaaa < 1:537508/93‑1 (MQ=255)
aCAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCaaaa < 2:2151439/93‑1 (MQ=255)
cAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAAt < 1:4068482/93‑1 (MQ=255)
aaaaTCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATc < 1:19405/93‑1 (MQ=255)
aaaTCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATct > 2:2916650/1‑93 (MQ=255)
aaaTCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATct < 1:5482512/93‑1 (MQ=255)
aaaTCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATct > 1:761884/1‑93 (MQ=255)
aTCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATctgc > 2:5950791/1‑93 (MQ=255)
aTCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATctgc > 1:1344962/1‑93 (MQ=255)
tCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATctgct > 1:424619/1‑93 (MQ=255)
cccGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATctgctg > 2:2200761/1‑93 (MQ=255)
cccGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATctgctg > 1:918214/1‑93 (MQ=255)
ccGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCtgctgc < 1:3198310/93‑1 (MQ=255)
cGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGctgcc > 1:2468734/1‑93 (MQ=255)
gCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGctgccc < 1:3914801/93‑1 (MQ=255)
cAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGctgccct < 2:2925998/93‑1 (MQ=255)
cAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGctgccct > 2:4688879/1‑93 (MQ=255)
aaTGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGctgccctgc > 1:4864438/1‑93 (MQ=255)
aaTGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGctgccctgc > 2:4562992/1‑93 (MQ=255)
aaTGCCGAATGGAGACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGctgccctgc < 2:1083510/93‑1 (MQ=255)
aTGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGctgccctgcc > 2:3529224/1‑93 (MQ=255)
gCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGcccc < 1:1489503/93‑1 (MQ=255)
cGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGcccccc > 2:2566955/1‑92 (MQ=255)
cGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCa < 2:5824096/93‑1 (MQ=255)
aaTGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAgc > 2:236083/1‑93 (MQ=255)
aaTGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAgc > 2:5274593/1‑93 (MQ=255)
aaTGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAgc > 1:3154480/1‑93 (MQ=255)
tGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAgcgc < 2:1348142/93‑1 (MQ=255)
gCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCTCTGGCGTa < 2:6163825/93‑1 (MQ=255)
cATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTAtt > 1:5473074/1‑93 (MQ=255)
cATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTAtt < 1:1705293/93‑1 (MQ=255)
cATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTAtt < 2:2136860/93‑1 (MQ=255)
cATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTAtt < 1:2088150/93‑1 (MQ=255)
aTCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTg < 1:5207576/93‑1 (MQ=255)
aTCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTg < 1:4637891/93‑1 (MQ=255)
cgTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTaa < 2:4938418/93‑1 (MQ=255)
cgTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTaa > 2:3391114/1‑93 (MQ=255)
cgTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTACCCTGCCCCCAGCGCTGGCGTATTGGTaa > 2:6188732/1‑93 (MQ=255)
gTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAAc < 2:4655476/93‑1 (MQ=255)
tAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAAcc < 1:1314197/93‑1 (MQ=255)
tAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAAcc < 1:5637440/93‑1 (MQ=255)
cTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCGCa > 2:5041121/1‑93 (MQ=255)
cTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCGCa > 1:1276075/1‑93 (MQ=255)
tCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCGCAc > 1:5243763/1‑93 (MQ=255)
|
TCTCGACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCATCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCGCAC > NC_000913/3863339‑3863518
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGTCTCGACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCATCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCGCACCGGA > NC_000913/3863337‑3863522
|
TGTCTCGACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACC > SRR4302533.1150272/1‑94 (MQ=60)
GTCTCGACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCC > SRR4302533.1241074/1‑94 (MQ=60)
TCTCGACATTGACGCGGAAAATAACCCGGAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCC < SRR4302533.3287293/94‑1 (MQ=60)
TCTCGACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCC > SRR4302533.5263691/1‑94 (MQ=60)
CTCGACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCC > SRR4302533.1310187/1‑94 (MQ=60)
CGACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCAT > SRR4302533.2750209/1‑94 (MQ=60)
CATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTATCTCACCCCCATCTG > SRR4302533.4828363/1‑94 (MQ=60)
CATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTG > SRR4302533.1597935/1‑94 (MQ=60)
ATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGA > SRR4302533.5041727/1‑94 (MQ=60)
ATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGA < SRR4302533.5981868/94‑1 (MQ=60)
ATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATACCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGA > SRR4302533.6278896/1‑94 (MQ=60)
TGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATC < SRR4302533.4781346/94‑1 (MQ=60)
GACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCG < SRR4302533.2149843/94‑1 (MQ=60)
ACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGA > SRR4302533.3044231/1‑94 (MQ=60)
ACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCAGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGA > SRR4302533.3399840/1‑94 (MQ=60)
GGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCA < SRR4302533.2567810/94‑1 (MQ=60)
GGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCAT > SRR4302533.1052441/1‑94 (MQ=60)
GAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATT < SRR4302533.3816435/94‑1 (MQ=60)
AAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTT > SRR4302533.2707993/1‑94 (MQ=60)
AAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTT > SRR4302533.1353682/1‑94 (MQ=60)
AAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTT > SRR4302533.4996251/1‑94 (MQ=60)
AATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCC > SRR4302533.1346763/1‑94 (MQ=60)
ATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCA < SRR4302533.1298377/94‑1 (MQ=60)
ATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCA > SRR4302533.240574/1‑94 (MQ=60)
TACCCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCAT < SRR4302533.2449599/94‑1 (MQ=60)
ACCCGCAACATCCACATGGTGAGCAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTG < SRR4302533.222903/94‑1 (MQ=60)
CCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGG < SRR4302533.888530/94‑1 (MQ=60)
CCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGG > SRR4302533.758692/1‑94 (MQ=60)
CGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTG > SRR4302533.5744214/1‑94 (MQ=60)
CGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTG < SRR4302533.1408393/94‑1 (MQ=60)
GCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGT < SRR4302533.5165012/94‑1 (MQ=60)
GCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGT < SRR4302533.4834268/94‑1 (MQ=60)
GCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGT < SRR4302533.2786346/94‑1 (MQ=60)
ACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCCGATCGACCATTTCCATTGGTGTACC < SRR4302533.584151/94‑1 (MQ=60)
CATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCC > SRR4302533.4062061/1‑94 (MQ=60)
CATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCC < SRR4302533.6271489/94‑1 (MQ=60)
ATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCG > SRR4302533.5730244/1‑94 (MQ=60)
ATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCA > SRR4302533.475653/1‑94 (MQ=60)
ATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCA > SRR4302533.6129146/1‑94 (MQ=60)
CCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGGCCATTTCCATTGGTGTACCCAGG > SRR4302533.2074413/1‑94 (MQ=60)
CCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGG > SRR4302533.3023672/1‑94 (MQ=60)
CCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGG > SRR4302533.3965189/1‑94 (MQ=60)
CCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGG < SRR4302533.3350144/94‑1 (MQ=60)
CACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGT > SRR4302533.765442/1‑94 (MQ=60)
ACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTC < SRR4302533.6255812/94‑1 (MQ=60)
CATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCG < SRR4302533.1606850/94‑1 (MQ=60)
CATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCG > SRR4302533.4112608/1‑94 (MQ=60)
ATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGC > SRR4302533.2485205/1‑94 (MQ=60)
ATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGC > SRR4302533.2176837/1‑94 (MQ=60)
ATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGC > SRR4302533.1228/1‑94 (MQ=60)
TGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCG > SRR4302533.1198270/1‑94 (MQ=60)
TGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCG > SRR4302533.6102284/1‑94 (MQ=60)
GAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAA > SRR4302533.5933898/1‑94 (MQ=60)
GAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAA > SRR4302533.2573640/1‑94 (MQ=60)
ACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAAT < SRR4302533.540706/94‑1 (MQ=60)
ACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAAT > SRR4302533.31857/1‑94 (MQ=60)
ACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCAAGGTCGCGCACAAT > SRR4302533.3028061/1‑94 (MQ=60)
CAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATC < SRR4302533.4093249/94‑1 (MQ=60)
AAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCT < SRR4302533.19536/94‑1 (MQ=60)
AAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCT > SRR4302533.766366/1‑94 (MQ=60)
AAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCT > SRR4302533.2498455/1‑94 (MQ=60)
AAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTG < SRR4302533.5513570/94‑1 (MQ=60)
AAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTG < SRR4302533.5515562/94‑1 (MQ=60)
AATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGC > SRR4302533.1353055/1‑94 (MQ=60)
ATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCT < SRR4302533.4911484/94‑1 (MQ=60)
ATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCT < SRR4302533.1505902/94‑1 (MQ=60)
ATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCT > SRR4302533.427155/1‑94 (MQ=60)
TCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTG > SRR4302533.923609/1‑94 (MQ=60)
CCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCC < SRR4302533.3217993/94‑1 (MQ=60)
CCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCC > SRR4302533.2483960/1‑94 (MQ=60)
CCGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCC < SRR4302533.4694358/94‑1 (MQ=60)
CGCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCC > SRR4302533.238233/1‑94 (MQ=60)
GCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCT < SRR4302533.2132105/94‑1 (MQ=60)
GCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCT < SRR4302533.3938715/94‑1 (MQ=60)
GCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCT < SRR4302533.1210800/94‑1 (MQ=60)
GCAAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCT < SRR4302533.5375549/94‑1 (MQ=60)
AAATGCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGC > SRR4302533.4893915/1‑94 (MQ=60)
GCCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCC < SRR4302533.1498487/94‑1 (MQ=60)
CCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCA > SRR4302533.903389/1‑94 (MQ=60)
CCGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCA < SRR4302533.2712133/94‑1 (MQ=60)
CGAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAG > SRR4302533.361986/1‑94 (MQ=60)
GAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGC > SRR4302533.3173873/1‑94 (MQ=60)
GAATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGC > SRR4302533.5445102/1‑94 (MQ=60)
AATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCG < SRR4302533.888486/94‑1 (MQ=60)
ATGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCTCCTAGCGC > SRR4302533.543603/1‑94 (MQ=60)
TGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCT < SRR4302533.156427/94‑1 (MQ=60)
TGGATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCT > SRR4302533.1485540/1‑94 (MQ=60)
GATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGG < SRR4302533.1827612/94‑1 (MQ=60)
ATACGCCATCGCGTAACTCACCCCCATCTTAGCGACCATTTCCATGGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGC < SRR4302533.2130718/94‑1 (MQ=60)
ATACGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCGTTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGC > SRR4302533.4476024/1‑94 (MQ=60)
CGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTA > SRR4302533.5675812/1‑94 (MQ=60)
CGCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTA > SRR4302533.2223134/1‑94 (MQ=60)
GCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTAT < SRR4302533.6222744/94‑1 (MQ=60)
GCCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTAT < SRR4302533.4087906/94‑1 (MQ=60)
CCATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATT > SRR4302533.5506061/1‑94 (MQ=60)
CATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTG < SRR4302533.2101009/94‑1 (MQ=60)
CATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTG < SRR4302533.1715619/94‑1 (MQ=60)
ATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGG < SRR4302533.5238949/94‑1 (MQ=60)
ATCGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGG < SRR4302533.4665994/94‑1 (MQ=60)
CGCGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTA > SRR4302533.94656/1‑94 (MQ=60)
CGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAAC < SRR4302533.96619/94‑1 (MQ=60)
CGTAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAAC < SRR4302533.3380267/94‑1 (MQ=60)
TAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCG < SRR4302533.5671528/94‑1 (MQ=60)
TAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCG < SRR4302533.4641224/94‑1 (MQ=60)
TAACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCG < SRR4302533.1322082/94‑1 (MQ=60)
AACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCGC < SRR4302533.116378/94‑1 (MQ=60)
ACTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCGCA > SRR4302533.1283747/1‑94 (MQ=60)
CTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCGCAC > SRR4302533.5743027/1‑94 (MQ=60)
CTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCGCAC > SRR4302533.5547792/1‑94 (MQ=60)
CTCACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCGCAC > SRR4302533.5275281/1‑94 (MQ=60)
ACCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCGCACCGG > SRR4302533.3588977/1‑94 (MQ=60)
CCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCGCACCGGA < SRR4302533.6022030/94‑1 (MQ=60)
CCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTCGCGTATTGGTAACCGCACCGGA > SRR4302533.5564834/1‑94 (MQ=60)
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TGTCTCGACATTGACGCGGAAAATAACCCGCAACATCCACATGGTGAACAAAATCCCGCAAATGCCGAATGGATACGCCATCGCGTAACTCATCCCCATCTGATCGACCATTTCCATTGGTGTACCCAGGTCGCGCAAAATCTGCTGCCCTGCCCCCAGCGCTGGCGTATTGGTAACCGCACCGGA > NC_000913/3863337‑3863522
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
