Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,867,655 |
T→C |
Y225H (TAT→CAT) |
yidS → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,867,655 | 0 | T | C | 100.0%
| 906.9
/ NA
| 276 | Y225H (TAT→CAT) | yidS | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (157/119); total (157/119) |
Only 100 of 284 total aligned reads displayed.
CCGTTCTACTCCTGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCTATCCAATGAAAGACGGTCAGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAA > NC_000913/3867565‑3867742
|
tCTACTCCTGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCaa > 1:1170506/1‑93 (MQ=255)
tCTACTCCTGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCaa > 1:199678/1‑93 (MQ=255)
aCTCCTGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGa < 2:1127690/93‑1 (MQ=255)
cTCCTGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGaa > 2:5118869/1‑93 (MQ=255)
tCCTGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGaaa < 1:480353/93‑1 (MQ=255)
ccTGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCTGTGCCCATCCAATGAAAg > 2:5258412/1‑93 (MQ=255)
ccTGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAg < 2:6066128/93‑1 (MQ=255)
cTGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGa < 1:3678594/93‑1 (MQ=255)
tGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGAc < 2:3736991/93‑1 (MQ=255)
tGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGGATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGAc > 2:3531506/1‑93 (MQ=255)
gCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACg > 1:3157747/1‑93 (MQ=255)
gCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACg < 1:4882371/93‑1 (MQ=255)
cATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACgg < 1:988244/93‑1 (MQ=255)
aTCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGt > 2:4680540/1‑93 (MQ=255)
tCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTc < 1:6238769/93‑1 (MQ=255)
tCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTc > 2:6002993/1‑93 (MQ=255)
cTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTcg > 2:4476505/1‑92 (MQ=255)
tttGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTcgg > 1:1389826/1‑91 (MQ=255)
ttGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGa < 2:2189704/93‑1 (MQ=255)
gATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGAcg > 2:647492/1‑93 (MQ=255)
tAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGAcgcg > 1:4380060/1‑93 (MQ=255)
aTTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGtt > 1:2272422/1‑93 (MQ=255)
aTTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGtt < 1:4572648/93‑1 (MQ=255)
ttCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGttt < 1:3619585/93‑1 (MQ=255)
ttCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGttt < 2:228266/93‑1 (MQ=255)
tCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTc < 1:538402/93‑1 (MQ=255)
tCGATAACCAACTGTTATTCATCGAGTATCAGCAAAGACCGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTc < 1:1700355/93‑1 (MQ=255)
gATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTACTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCac > 1:3385421/1‑93 (MQ=255)
taactaacTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCacga > 2:333445/1‑93 (MQ=255)
aactaactGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCgcgac > 1:542377/1‑93 (MQ=255)
aactaactGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCacgac > 1:4611513/1‑93 (MQ=255)
aactaactGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCacgac < 1:2896117/93‑1 (MQ=255)
actaactGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCacgacg > 1:3351198/1‑93 (MQ=255)
ctaactGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGc < 1:5352204/93‑1 (MQ=255)
ctaactGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGc > 1:3597497/1‑93 (MQ=255)
taactGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGCCGGTCGGACGCGTTTCACGACGCt < 2:580497/93‑1 (MQ=255)
taactGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCt > 1:2061947/1‑93 (MQ=255)
aactGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTg < 2:2734489/93‑1 (MQ=255)
actGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGa > 1:252370/1‑93 (MQ=255)
ctGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGaa > 2:3909911/1‑93 (MQ=255)
ctGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGaa > 2:959416/1‑93 (MQ=255)
tGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGaaa < 2:3183599/93‑1 (MQ=255)
gTTCTTCATGGAGTATCAGCAAACACGGTTATTTTATCTTCGGCGCTGTCCATCCAATGAAAGACGGACGGACGCGATTCACGACGCTGAAag > 2:6092083/1‑93 (MQ=255)
ttATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAaga < 1:5763964/93‑1 (MQ=255)
tATTCATGGAGTATCAGCAACGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAagag < 1:4203598/93‑1 (MQ=255)
tATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAagag < 2:5492463/93‑1 (MQ=255)
tATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAagag > 2:383703/1‑93 (MQ=255)
tATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAagag > 2:3403253/1‑93 (MQ=255)
aTTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAgaga < 1:2306469/93‑1 (MQ=255)
aTTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAgaga < 1:2637763/93‑1 (MQ=255)
tCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGaaa > 1:4674576/1‑93 (MQ=255)
tCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGaaa > 2:1766459/1‑93 (MQ=255)
tGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATg > 2:5766462/1‑93 (MQ=255)
ggAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGa > 2:4578249/1‑93 (MQ=255)
gAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAg > 2:1512322/1‑93 (MQ=255)
aGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAgc < 1:1065416/93‑1 (MQ=255)
gTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAgcg > 1:3521292/1‑93 (MQ=255)
gTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAgcg < 1:5304849/93‑1 (MQ=255)
tATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAgcgc < 2:2426175/93‑1 (MQ=255)
tCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCt > 2:285203/1‑93 (MQ=255)
cAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCtt > 2:1386257/1‑93 (MQ=255)
gCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTc < 2:4111587/93‑1 (MQ=255)
gCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTc > 2:6042816/1‑93 (MQ=255)
cAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCa < 1:5140145/93‑1 (MQ=255)
aaaGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAg < 2:4886878/93‑1 (MQ=255)
aaaGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAg > 1:5551801/1‑93 (MQ=255)
aGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGtt > 1:151810/1‑93 (MQ=255)
aGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGtt < 2:292128/93‑1 (MQ=255)
aGACCGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGGTGAAAGAGAAAATGAGCGCCGTTCAGtt > 2:2212799/1‑93 (MQ=255)
gACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTc < 1:109327/93‑1 (MQ=255)
gACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTc < 1:5654793/93‑1 (MQ=255)
cGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCa > 1:1896022/1‑93 (MQ=255)
ggTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAg < 1:4993068/93‑1 (MQ=255)
ggTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAg > 1:1230164/1‑93 (MQ=255)
gTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGt > 1:1305006/1‑93 (MQ=255)
tATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGttt < 1:4095546/93‑1 (MQ=255)
tATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGttt < 2:5941421/93‑1 (MQ=255)
tATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGttt < 1:306863/93‑1 (MQ=255)
tATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGttt < 1:2948823/93‑1 (MQ=255)
tttATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGt > 1:3779490/1‑93 (MQ=255)
tttATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGt > 1:4308534/1‑93 (MQ=255)
tttATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGACTTTCAGTTCCAGTTTGGt > 1:2373294/1‑93 (MQ=255)
ttATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTa > 2:3045420/1‑93 (MQ=255)
ttATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTa > 2:4297856/1‑93 (MQ=255)
tATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTaa < 2:1686545/93‑1 (MQ=255)
tATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTaa > 2:1355605/1‑93 (MQ=255)
tATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTaa > 1:86522/1‑93 (MQ=255)
tCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGa < 2:4845460/93‑1 (MQ=255)
tCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGa < 1:325291/93‑1 (MQ=255)
tttGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACg > 2:4037362/1‑93 (MQ=255)
tttGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACg < 1:4150598/93‑1 (MQ=255)
ttGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACgg < 2:5380652/93‑1 (MQ=255)
tGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGt < 2:710934/93‑1 (MQ=255)
ggCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTg < 1:3896663/93‑1 (MQ=255)
ggCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTg > 2:1924401/1‑93 (MQ=255)
gCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGa < 1:5057647/93‑1 (MQ=255)
cGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGaa > 1:4465463/1‑93 (MQ=255)
gTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGaaaa < 1:5951587/93‑1 (MQ=255)
gTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGaaaa < 1:3031197/93‑1 (MQ=255)
gTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGaaaa < 2:2663825/93‑1 (MQ=255)
|
CCGTTCTACTCCTGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCTATCCAATGAAAGACGGTCAGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAA > NC_000913/3867565‑3867742
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTGCCGTTCTACTCCTGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCTATCCAATGAAAGACGGTCAGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAA > NC_000913/3867562‑3867747
|
GTGCCGTTCTACTCCTGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCC > SRR4302533.2046219/1‑94 (MQ=60)
TGCCGTTCTACTCCTGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCA < SRR4302533.1381242/94‑1 (MQ=60)
GCCGTTCTACTCCTGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCAT > SRR4302533.2049985/1‑94 (MQ=60)
CGTTCTACTCCTGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCC > SRR4302533.4632977/1‑94 (MQ=60)
CGTTCTACTCCTGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCC > SRR4302533.4585584/1‑94 (MQ=60)
TTCTACTCCTGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAA > SRR4302533.200942/1‑94 (MQ=60)
TTCTACTCCTGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAA > SRR4302533.1177534/1‑94 (MQ=60)
CTACTCCTGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATG < SRR4302533.2180052/94‑1 (MQ=60)
CTACTCCTGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATG < SRR4302533.3576266/94‑1 (MQ=60)
ACTCCTGCATCTTTGATAATTCGATAACTAACTGTTATTCATGAAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAA > SRR4302533.6322418/1‑94 (MQ=60)
TCCTGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAG < SRR4302533.2536359/94‑1 (MQ=60)
TCCTGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAG < SRR4302533.483224/94‑1 (MQ=60)
CTGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGAC < SRR4302533.925872/94‑1 (MQ=60)
CTGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGAC < SRR4302533.5112162/94‑1 (MQ=60)
CTGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGAC < SRR4302533.3701206/94‑1 (MQ=60)
TGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACG > SRR4302533.3177181/1‑94 (MQ=60)
TGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACG > SRR4302533.4194723/1‑94 (MQ=60)
TGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACG < SRR4302533.4907076/94‑1 (MQ=60)
TGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACG < SRR4302533.1225859/94‑1 (MQ=60)
TGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACG < SRR4302533.7947/94‑1 (MQ=60)
GCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGG < SRR4302533.4911949/94‑1 (MQ=60)
CATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGT > SRR4302533.2291356/1‑94 (MQ=60)
CATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGT < SRR4302533.994027/94‑1 (MQ=60)
ATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTC < SRR4302533.3615161/94‑1 (MQ=60)
TCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCG < SRR4302533.4872194/94‑1 (MQ=60)
TCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCG > SRR4302533.318721/1‑94 (MQ=60)
TCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCG < SRR4302533.6276130/94‑1 (MQ=60)
CTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGG > SRR4302533.1398197/1‑94 (MQ=60)
TTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGA > SRR4302533.3290156/1‑94 (MQ=60)
TTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGAC < SRR4302533.2933395/94‑1 (MQ=60)
TGATAATTCGATAACTAACTGTTATTCATGGAGAATCAGCAAAGACGGATATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACG > SRR4302533.3672038/1‑94 (MQ=60)
GATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGC > SRR4302533.4828103/1‑94 (MQ=60)
GATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGC < SRR4302533.1516799/94‑1 (MQ=60)
ATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCG > SRR4302533.3637370/1‑94 (MQ=60)
ATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCG > SRR4302533.4406505/1‑94 (MQ=60)
ATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCG > SRR4302533.5372367/1‑94 (MQ=60)
TAATTCGATAACTAACTGTTATTCATGGAGTATCAGCGAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGT > SRR4302533.1252587/1‑94 (MQ=60)
TAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGT > SRR4302533.4409725/1‑94 (MQ=60)
TAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGT > SRR4302533.5395659/1‑94 (MQ=60)
AATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTT > SRR4302533.2286486/1‑94 (MQ=60)
ATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTT < SRR4302533.4600360/94‑1 (MQ=60)
ATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTT < SRR4302533.5151922/94‑1 (MQ=60)
TTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTC < SRR4302533.3641853/94‑1 (MQ=60)
TTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTC < SRR4302533.3201021/94‑1 (MQ=60)
TCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCA < SRR4302533.541603/94‑1 (MQ=60)
TCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCA < SRR4302533.1090869/94‑1 (MQ=60)
TCGATAACCAACTGTTATTCATCGAGTATCAGCAAAGACCGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCA < SRR4302533.1710661/94‑1 (MQ=60)
CGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCAC > SRR4302533.2688694/1‑94 (MQ=60)
CGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTACTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCAC > SRR4302533.3406322/1‑94 (MQ=60)
GATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACG < SRR4302533.1994555/94‑1 (MQ=60)
TAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCGCGAC > SRR4302533.545598/1‑94 (MQ=60)
TAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGAC > SRR4302533.4639453/1‑94 (MQ=60)
TAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGAC < SRR4302533.5230621/94‑1 (MQ=60)
TAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGAC > SRR4302533.4040743/1‑94 (MQ=60)
TAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGAC > SRR4302533.5727305/1‑94 (MQ=60)
AACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACG < SRR4302533.2913925/94‑1 (MQ=60)
AACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACG > SRR4302533.3371899/1‑94 (MQ=60)
ACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGC > SRR4302533.3619632/1‑94 (MQ=60)
CTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCT < SRR4302533.124102/94‑1 (MQ=60)
CTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCT < SRR4302533.2982731/94‑1 (MQ=60)
CTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCT < SRR4302533.5384317/94‑1 (MQ=60)
CTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCT > SRR4302533.2074664/1‑94 (MQ=60)
CTAACTGTTATTCATGGAGGATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCT > SRR4302533.5444646/1‑94 (MQ=60)
TAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTG > SRR4302533.4674806/1‑94 (MQ=60)
TAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTG > SRR4302533.2061119/1‑94 (MQ=60)
AACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGA > SRR4302533.253923/1‑94 (MQ=60)
ACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAA > SRR4302533.2624572/1‑94 (MQ=60)
ACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAA > SRR4302533.312144/1‑94 (MQ=60)
CTNTNNNTNANGGAGTATCNGNNNAGACGGTTATTTTATCTTTGGNGGTGCCCATCCAATGAAAGACGGTCGGACGNGTTTCACGACGCTGAAA < SRR4302533.4593961/94‑1 (MQ=60)
CTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAA < SRR4302533.4991767/94‑1 (MQ=60)
TGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAG < SRR4302533.5397868/94‑1 (MQ=60)
GTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGA > SRR4302533.3499361/1‑94 (MQ=60)
TTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGCAAGAG > SRR4302533.1121135/1‑94 (MQ=60)
TTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAG < SRR4302533.4329213/94‑1 (MQ=60)
TTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAG < SRR4302533.4384590/94‑1 (MQ=60)
TTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAG < SRR4302533.5798750/94‑1 (MQ=60)
TTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAG > SRR4302533.2716873/1‑94 (MQ=60)
TATTCATGGAGTATCAGCAACGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGA < SRR4302533.4229027/94‑1 (MQ=60)
TATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGA > SRR4302533.1108573/1‑94 (MQ=60)
ATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAA < SRR4302533.2320758/94‑1 (MQ=60)
ATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAA < SRR4302533.2653974/94‑1 (MQ=60)
TTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAA > SRR4302533.5477832/1‑94 (MQ=60)
TTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAA > SRR4302533.3072155/1‑94 (MQ=60)
TTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAA > SRR4302533.4702901/1‑94 (MQ=60)
TCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAA > SRR4302533.3784604/1‑94 (MQ=60)
TCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAA < SRR4302533.1721413/94‑1 (MQ=60)
ATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATG > SRR4302533.1950363/1‑94 (MQ=60)
ATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATG < SRR4302533.1773883/94‑1 (MQ=60)
TGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGA < SRR4302533.5581491/94‑1 (MQ=60)
TGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGA > SRR4302533.381778/1‑94 (MQ=60)
GGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAG < SRR4302533.5916687/94‑1 (MQ=60)
GGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAG < SRR4302533.4340555/94‑1 (MQ=60)
GGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAG < SRR4302533.214604/94‑1 (MQ=60)
GAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGC > SRR4302533.2508879/1‑94 (MQ=60)
AGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCG > SRR4302533.3542999/1‑94 (MQ=60)
AGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCG > SRR4302533.4618358/1‑94 (MQ=60)
AGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCG < SRR4302533.1071674/94‑1 (MQ=60)
GTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCGATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGC > SRR4302533.3403996/1‑94 (MQ=60)
GTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGC < SRR4302533.5336639/94‑1 (MQ=60)
GTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGC > SRR4302533.441948/1‑94 (MQ=60)
TATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCC > SRR4302533.4924204/1‑94 (MQ=60)
CAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTT < SRR4302533.5634460/94‑1 (MQ=60)
AGCAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTC > SRR4302533.5679491/1‑94 (MQ=60)
CAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAG > SRR4302533.3907763/1‑94 (MQ=60)
CAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAG > SRR4302533.5585329/1‑94 (MQ=60)
CAAAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAG < SRR4302533.5171211/94‑1 (MQ=60)
AAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTT > SRR4302533.152781/1‑94 (MQ=60)
AAGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTC > SRR4302533.377412/1‑94 (MQ=60)
AGACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGAGGCTGAAAGAGAAAATGAGCGCCTTTCAGTTC > SRR4302533.2295340/1‑94 (MQ=60)
GACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCC < SRR4302533.5688968/94‑1 (MQ=60)
GACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCC < SRR4302533.110022/94‑1 (MQ=60)
ACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCA > SRR4302533.5342622/1‑94 (MQ=60)
ACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCA > SRR4302533.158453/1‑94 (MQ=60)
ACGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCA > SRR4302533.1907593/1‑94 (MQ=60)
CGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCgcg > SRR4302533.1207092/1‑91 (MQ=60)
CGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAG > SRR4302533.2948029/1‑94 (MQ=60)
CGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAG > SRR4302533.1348269/1‑94 (MQ=60)
CGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAG > SRR4302533.5432885/1‑94 (MQ=60)
CGGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAG > SRR4302533.1237527/1‑94 (MQ=60)
GGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGT > SRR4302533.1312850/1‑94 (MQ=60)
GGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGT > SRR4302533.2617215/1‑94 (MQ=60)
GGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGT < SRR4302533.5023340/94‑1 (MQ=60)
GGTTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGT > SRR4302533.4318723/1‑94 (MQ=60)
TTATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTCCAGTTCCAGTTT < SRR4302533.3538919/94‑1 (MQ=60)
TATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTG > SRR4302533.6102577/1‑94 (MQ=60)
TATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTG > SRR4302533.3340576/1‑94 (MQ=60)
TATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTG < SRR4302533.308740/94‑1 (MQ=60)
TATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTG < SRR4302533.4120478/94‑1 (MQ=60)
TATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTG < SRR4302533.2966858/94‑1 (MQ=60)
TATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTG < SRR4302533.4597404/94‑1 (MQ=60)
ATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGG > SRR4302533.5084979/1‑94 (MQ=60)
ATTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGG < SRR4302533.3028729/94‑1 (MQ=60)
TTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGT > SRR4302533.4334466/1‑94 (MQ=60)
TTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGT > SRR4302533.3802643/1‑94 (MQ=60)
TTTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGACTTTCAGTTCCAGTTTGGT > SRR4302533.2387981/1‑94 (MQ=60)
TTTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTA < SRR4302533.1333582/94‑1 (MQ=60)
TTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAA > SRR4302533.417293/1‑94 (MQ=60)
TTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAA > SRR4302533.1521644/1‑94 (MQ=60)
TTATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAA > SRR4302533.87077/1‑94 (MQ=60)
TATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGAGGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAG < SRR4302533.3403121/94‑1 (MQ=60)
TATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAG > SRR4302533.6066166/1‑94 (MQ=60)
TATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAG < SRR4302533.945276/94‑1 (MQ=60)
ATCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTGCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGA > SRR4302533.4734002/1‑94 (MQ=60)
TCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGAC < SRR4302533.327274/94‑1 (MQ=60)
TCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGAC < SRR4302533.3167110/94‑1 (MQ=60)
TCTTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGAC < SRR4302533.2368753/94‑1 (MQ=60)
TTTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGG < SRR4302533.4175741/94‑1 (MQ=60)
TTGGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGT > SRR4302533.4126924/1‑94 (MQ=60)
GGCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGA < SRR4302533.3920439/94‑1 (MQ=60)
GCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGATCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAA < SRR4302533.364473/94‑1 (MQ=60)
GCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAA < SRR4302533.5088213/94‑1 (MQ=60)
GCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAA > SRR4302533.5770254/1‑94 (MQ=60)
GCGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAA > SRR4302533.4492472/1‑94 (MQ=60)
CGGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAA > SRR4302533.5049436/1‑94 (MQ=60)
GGTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAA > SRR4302533.3978998/1‑94 (MQ=60)
GTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAG < SRR4302533.5987584/94‑1 (MQ=60)
GTGCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAG < SRR4302533.3049747/94‑1 (MQ=60)
GCCCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCG > SRR4302533.1376067/1‑94 (MQ=60)
CCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAA > SRR4302533.810689/1‑94 (MQ=60)
CCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAA < SRR4302533.1276221/94‑1 (MQ=60)
CCATCCAATGAAAGACGGTCGGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAA < SRR4302533.1842320/94‑1 (MQ=60)
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GTGCCGTTCTACTCCTGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCTATCCAATGAAAGACGGTCAGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAA > NC_000913/3867562‑3867747
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
