Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,876,595 |
G→C |
P385A (CCG→GCG) |
gyrB ← |
DNA gyrase subunit B |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,876,595 | 0 | G | C | 100.0%
| 513.2
/ NA
| 160 | P385A (CCG→GCG) | gyrB | DNA gyrase subunit B |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (34/126); total (34/126) |
Only 100 of 221 total aligned reads displayed.
GGATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGGCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTT > NC_000913/3876504‑3876684
|
ggATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCCTTTTACGCGCgcggcgcggc > 1:167978/1‑93 (MQ=255)
aTCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGcgccgc < 1:3964888/93‑1 (MQ=255)
aTCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCCTTTTACGCCGGCGGcgccgccc > 2:6001543/1‑91 (MQ=255)
tCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCt < 2:1614496/93‑1 (MQ=255)
gcgTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGGCGCGCCGCTTc > 2:5181301/1‑93 (MQ=255)
cgctCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTca < 2:2548152/90‑1 (MQ=255)
cgTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTca < 2:560274/93‑1 (MQ=255)
gTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTcac < 2:5875441/93‑1 (MQ=255)
ttCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTcacg < 1:4212294/93‑1 (MQ=255)
ttCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTcacg < 2:4623690/93‑1 (MQ=255)
tCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTcacgg < 2:39769/93‑1 (MQ=255)
tCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTACGCGCGCGGCGCGGCGCCTcaccg > 2:6024564/1‑91 (MQ=255)
tcTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTcacggg < 1:4538729/92‑1 (MQ=255)
tGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTcacgggca < 2:3481417/93‑1 (MQ=255)
aGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTcacgggcacggg < 1:2617379/93‑1 (MQ=255)
gTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCacgggcacgggc < 2:1102356/93‑1 (MQ=255)
gTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCCCGTCccggggccgggc > 1:2287054/1‑93 (MQ=255)
tGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGCCGCGCCGCCTcacgggcacggggcgc > 1:287356/1‑89 (MQ=255)
tGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACCGGCACGGgcagc > 2:1785787/1‑93 (MQ=255)
tGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTACGCGCGCGACGCGCCGCTTCACGGGGACGGgcagc > 2:4103494/1‑93 (MQ=255)
gCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTACGCGCGCGACGCGCCCCTTCACCGGCGCGGgccgca > 2:306930/1‑93 (MQ=255)
ccAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCTCCGCTTCACGGGCACTGGCAGCAt < 2:6199205/93‑1 (MQ=255)
cAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATc < 1:72187/93‑1 (MQ=255)
aGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACCCGCGCGACGCGCCGCTTCACGGGCACGGGCGGCATCg > 1:5713119/1‑93 (MQ=255)
gTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCCCCTTTCCGGCGGGTCATTTCACGCGGGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGa < 2:3384587/93‑1 (MQ=255)
ttGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑a < 2:786763/93‑1 (MQ=255)
tGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑aa > 1:616006/1‑93 (MQ=255)
gCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AAt < 1:3014682/93‑1 (MQ=255)
ccGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCTTCTCGCTCGCGGGACGCGCCGCTTCCCAGGGGCGGGCCGCATCGAT‑AAttt > 2:4971561/1‑93 (MQ=255)
ccGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGCCGCGCCGCCTCACCGGCACGGGCAGCATCGAT‑TAttt > 1:5288118/1‑93 (MQ=255)
cGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCCTTTCACGCGCGCGACGCCCCCGCTCACCGGCACGGGCCACAACGGA‑AAtttt > 1:1417155/1‑93 (MQ=255)
gCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTTACGCGCGCGACGCGCCGCTTCACGGGCACGGGGAGCATCGAT‑AAtttttc > 2:3858589/1‑91 (MQ=255)
aGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCa < 2:85819/93‑1 (MQ=255)
aGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCCTTTCACGCGCGCGACGGGCCGCTTCACCGGCACGGGCCGGACCCATAAATTTTGcc > 1:1158643/1‑93 (MQ=255)
ggCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCaa < 1:3736980/93‑1 (MQ=255)
gCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAAc < 1:477673/93‑1 (MQ=255)
cccGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAAcc < 1:5961539/93‑1 (MQ=255)
ccGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCa < 2:5613329/93‑1 (MQ=255)
ccGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCa < 1:1945231/93‑1 (MQ=255)
ccGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCa < 2:2013963/93‑1 (MQ=255)
ccGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTACGCGCGCGGCGCGCCGCTTTACCGGCACGGGCAGCATCGAT‑AATTTTGTCAACCa > 2:5961935/1‑93 (MQ=255)
ccGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACCGGCAGCATCGAT‑AATTTTGTccacca > 1:2701736/1‑93 (MQ=255)
gCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGTCAACCACg > 1:1295259/1‑93 (MQ=255)
cTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGa < 1:3678359/93‑1 (MQ=255)
cTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGa > 1:1956039/1‑93 (MQ=255)
tAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGAt < 2:504248/93‑1 (MQ=255)
aGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGAttt < 2:4574634/93‑1 (MQ=255)
gTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCCCGGGCACGGGCAGCATCGAT‑AATTTTTCCAACCCCGAtttt > 2:4210868/1‑93 (MQ=255)
gTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGAtttt < 2:2178841/93‑1 (MQ=255)
cGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTcg < 1:2787262/93‑1 (MQ=255)
gAGCGCACCTTTACGGCGGGGCCTTTCACGCGCGCGACGCGCCGCCTCACGGGCACGGGCAGGAACGAT‑AATTTTTTCAACCACCAttttttc > 2:1134886/1‑90 (MQ=255)
cgcACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTc < 2:1470928/93‑1 (MQ=255)
cgcACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTc < 1:660070/93‑1 (MQ=255)
cgcACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTc < 1:5746339/93‑1 (MQ=255)
gcACCTTTACGGCGGGGTATTTTCCGCGCGCGGCGCGCCGCCTCACTGGCAGCGGCAGCCTCGATCAATTTTGTCACCCA‑GAATTTCgcggcg > 2:4609100/1‑93 (MQ=255)
cACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCgg < 2:3453786/93‑1 (MQ=255)
cccTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGt < 2:3766766/92‑1 (MQ=255)
aCCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGt < 2:1666976/93‑1 (MQ=255)
ccTTTACGGCGGGTCATTTCACGCGCGCGACGTGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGtt < 2:5765850/93‑1 (MQ=255)
ccTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTTCCAACCACGATTTTCGCGGCGGtt > 2:4934237/1‑93 (MQ=255)
ccTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGtt < 1:1009609/93‑1 (MQ=255)
cTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTg < 1:1559704/93‑1 (MQ=255)
cTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTg < 1:5919793/93‑1 (MQ=255)
tttACGGCGGGTCATTTTACGCGCGCGCCGCGCCGCTTCACGGGGACGGGCAGCATCGCT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTgg > 2:447656/1‑93 (MQ=255)
tttACGGCGGGGCATTTCACGCGCGCGGCGCGCCGCTTCACGGGCACGGGGAGCATCGAT‑AATTTTGGCAACCACGATTTTTGCGTCGGGTgg > 2:872329/1‑93 (MQ=255)
ttACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTggg < 2:3577298/93‑1 (MQ=255)
ttACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTggg < 2:2475531/93‑1 (MQ=255)
ggcggGTCATTTCACGCGCGCGACGCTCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGtttt < 2:1916309/93‑1 (MQ=255)
gcggGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTc < 1:1391550/93‑1 (MQ=255)
gcggGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTc > 1:498538/1‑93 (MQ=255)
gcggGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTc < 1:5630418/93‑1 (MQ=255)
cggGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTcc > 1:1077520/1‑93 (MQ=255)
gggTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCca < 2:310683/93‑1 (MQ=255)
ggTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCcag > 1:1775354/1‑93 (MQ=255)
gTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCcagc < 1:926375/93‑1 (MQ=255)
tCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCATCCTCGATTTTCGCGTCGGTTGGGTTTTCcagca < 1:3349103/93‑1 (MQ=255)
tttCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAggg > 2:6205023/1‑92 (MQ=255)
tttCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGt > 2:2971976/1‑93 (MQ=255)
tttCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGt > 2:315031/1‑93 (MQ=255)
tttCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGt < 2:76884/93‑1 (MQ=255)
ttCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTa < 2:2845064/93‑1 (MQ=255)
cACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTAtt > 1:2103147/1‑93 (MQ=255)
cACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTAtt > 2:2800675/1‑93 (MQ=255)
aCGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTc < 1:5397705/93‑1 (MQ=255)
aCGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTc < 1:6101711/93‑1 (MQ=255)
aCGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGG‑TTTCCAGCAGGTATTCt > 1:6020440/1‑93 (MQ=255)
cgcgcgcgACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCt < 2:212302/93‑1 (MQ=255)
cgcgcgcgACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCt < 1:5039661/93‑1 (MQ=255)
cgcgcgACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGc < 1:2181776/93‑1 (MQ=255)
gcgcgACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGcc > 2:5895144/1‑93 (MQ=255)
cgcgACGCGCCGCTTCACGGGCGCGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCca < 2:1262059/93‑1 (MQ=255)
gcgACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCcag > 1:4673011/1‑93 (MQ=255)
ccgACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCcag < 1:3879882/92‑1 (MQ=255)
cgACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGGATTCTGCcagc > 2:1354568/1‑93 (MQ=255)
gACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCcagca > 1:4015478/1‑93 (MQ=255)
gACGCGCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCcagca < 2:4272582/93‑1 (MQ=255)
cgcgCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAgt > 2:5463889/1‑93 (MQ=255)
cgcgCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAgt < 2:3484986/93‑1 (MQ=255)
cgcgCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAgt < 1:1191549/93‑1 (MQ=255)
cgcgCCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAgt < 1:5998160/93‑1 (MQ=255)
|
GGATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGGCGCTTCACGGGCACGGGCAGCATCGAT‑AATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTT > NC_000913/3876504‑3876684
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGGATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGGCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTCGTT > NC_000913/3876503‑3876688
|
CGGATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCCTTTTACGCGCGCGGCGCGGC > SRR4302533.169039/1‑94 (MQ=60)
CGGATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCACTTCAACCGCGCGACGCGCC > SRR4302533.3995134/1‑94 (MQ=60)
GATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTTCCGCGCGCGTCGCGCCGC > SRR4302533.3006036/1‑94 (MQ=60)
ATCGCGTTCGTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCT < SRR4302533.3035803/94‑1 (MQ=60)
ATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCT < SRR4302533.3989041/94‑1 (MQ=60)
TCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGGCGCGCCGCTT > SRR4302533.842556/1‑94 (MQ=60)
GCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCA < SRR4302533.679776/94‑1 (MQ=60)
GTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTTACGCGCGCGGCGCGCCGCCTCACG > SRR4302533.2844046/1‑94 (MQ=60)
GTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACG < SRR4302533.4795803/94‑1 (MQ=60)
GTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACG < SRR4302533.1330625/94‑1 (MQ=60)
TTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGG < SRR4302533.4237775/94‑1 (MQ=60)
TTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACAG < SRR4302533.372707/94‑1 (MQ=60)
TTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGAATTTCACGCGCGCGCCGCCGCGCCTCACAG > SRR4302533.4875139/1‑94 (MQ=60)
TCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGG < SRR4302533.1246671/94‑1 (MQ=60)
TCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGC < SRR4302533.4566209/94‑1 (MQ=60)
CAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGG < SRR4302533.2338520/94‑1 (MQ=60)
AGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGC < SRR4302533.2633442/94‑1 (MQ=60)
GTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGGATTTCACGCGCGCGGCGCGCCGCCTCACGGGgcagggga > SRR4302533.2794207/1‑86 (MQ=60)
CTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTTACGCGCGCGGCGCGCCGCTTCACGGGCACGGGCAGC > SRR4302533.3047301/1‑94 (MQ=60)
CTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGCCGCGCCGCCTCACGGGCACGGGgcgc > SRR4302533.289114/1‑90 (MQ=60)
TGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCCTTTCACCCGCGCGACGCGCCGCTTCACGGGCccggggggca > SRR4302533.4715379/1‑84 (MQ=60)
TGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGGCGCGCCGCTTCCCGGGGACGGGCAGCC > SRR4302533.3779575/1‑94 (MQ=60)
CAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCG < SRR4302533.72650/94‑1 (MQ=60)
CAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACCCGCGCGACGCGCCGCTTCACGGGCACGGGCGGCATCG > SRR4302533.5747628/1‑94 (MQ=60)
AGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCCTTTCACGCGCGCGACGCGCCGCTTCACGGGGACGGGCAGCAccca > SRR4302533.6057324/1‑90 (MQ=60)
GTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCCTTTCAAGCGCGCGACGCGCCGCTTCCCCGGCACCGGCCGCATCGCT > SRR4302533.1314818/1‑94 (MQ=60)
GTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGGAGCATCGAT > SRR4302533.549471/1‑94 (MQ=60)
TTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA < SRR4302533.1816000/94‑1 (MQ=60)
TTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAA > SRR4302533.619625/1‑94 (MQ=60)
GCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATT < SRR4302533.3033119/94‑1 (MQ=60)
GCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATT < SRR4302533.1823294/94‑1 (MQ=60)
CCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTT < SRR4302533.3969036/94‑1 (MQ=60)
CCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGCCGCGCCGCCTCACCGGCACGGGCAGCATCGATTATTT > SRR4302533.5319788/1‑94 (MQ=60)
CCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTT < SRR4302533.1057131/94‑1 (MQ=60)
CGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTG < SRR4302533.604484/94‑1 (MQ=60)
CGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCCTTTCACGCGCGCGGCGCGCCGCCTCCCGGGCACGGGCCGCATCGATAATTTTT > SRR4302533.4004844/1‑94 (MQ=60)
GGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGGATTTTACCCGCGCGGCGCGCCGCTTCACGGGggccgggggcatcgataatttttt > SRR4302533.4666511/1‑70 (MQ=44)
GCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCC < SRR4302533.2647644/94‑1 (MQ=60)
CAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCCTTTCACGCGCGCGACGGGCCGCTTCACCGGCACGGGCcggacccataaattttgcc > SRR4302533.1165596/1‑75 (MQ=60)
GGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAAC < SRR4302533.3759903/94‑1 (MQ=60)
GCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACTCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACC < SRR4302533.3403793/94‑1 (MQ=60)
GCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACC < SRR4302533.480523/94‑1 (MQ=60)
CCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCA < SRR4302533.5997606/94‑1 (MQ=60)
CCCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACCGGCAGCATCGATAATTTTGTCCACCA > SRR4302533.2718311/1‑94 (MQ=60)
CCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCAC < SRR4302533.3963502/94‑1 (MQ=60)
CCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCAC < SRR4302533.1957094/94‑1 (MQ=60)
CCGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCAAGCGCGGGACGCGCCGCTTCACGGGCAAGGGCCGCATCGATAATTATGGCAACCCC > SRR4302533.5958466/1‑94 (MQ=60)
CGCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTTACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGTCAACCACG > SRR4302533.1303056/1‑94 (MQ=60)
GCTAAGTCGAGCGCACCTTTACGGCGGGTGATTTCACGCCGGCGACGCGCCGCATCACGGGCACGGGCAGCATCcacaattttcaccaccacga > SRR4302533.2017587/1‑74 (MQ=60)
GCTAAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGA > SRR4302533.1967962/1‑94 (MQ=60)
CTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGTCAACCACGAT > SRR4302533.5746884/1‑94 (MQ=60)
CTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGAT < SRR4302533.3700969/94‑1 (MQ=60)
CTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGAT < SRR4302533.5847957/94‑1 (MQ=60)
TAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTTTCAACCACGATT > SRR4302533.5089134/1‑94 (MQ=60)
AAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTT < SRR4302533.6151725/94‑1 (MQ=60)
AAGTCGAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGGAGCATCGATAATTTTGCCAAACACGATTT > SRR4302533.1690090/1‑94 (MQ=60)
TCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCG < SRR4302533.6011222/94‑1 (MQ=60)
TCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCG < SRR4302533.1179196/94‑1 (MQ=60)
CGAGCGCACCTTTACGGCGGGTCATTTTACGCGCGGGACGCGCCGCTTCACGGGCACGGGGCGCATCGATAATTTTGGCCACCACGATTTTCGC > SRR4302533.2119896/1‑94 (MQ=60)
CGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGC < SRR4302533.2804388/94‑1 (MQ=60)
GAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCG < SRR4302533.6206309/94‑1 (MQ=60)
GAGCGCACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCGCTTCACCGGGACGGGCGGCATCGATAATTTTGTCCACCACGCTTTTTGCG > SRR4302533.1311999/1‑94 (MQ=57)
AGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGGCGCGCCGCTTCACGGGGACGGGCAGCATCGATAATTTTTCCAACCACGATTTTTGCGT > SRR4302533.3396783/1‑94 (MQ=60)
GCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTC < SRR4302533.2236677/94‑1 (MQ=60)
CGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCG < SRR4302533.663958/94‑1 (MQ=60)
CGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCG < SRR4302533.5781012/94‑1 (MQ=60)
CGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCG < SRR4302533.140690/94‑1 (MQ=60)
CGCACCTTTACGGCGGGGCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTTTCAACCACGATTTTCGCGTCG > SRR4302533.3805825/1‑94 (MQ=60)
CACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGT < SRR4302533.528136/94‑1 (MQ=60)
ACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTT < SRR4302533.6024281/94‑1 (MQ=60)
CCTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTG < SRR4302533.1015514/94‑1 (MQ=60)
CTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGG < SRR4302533.5955576/94‑1 (MQ=60)
CTTTACGGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGG < SRR4302533.1569096/94‑1 (MQ=60)
GGCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTC > SRR4302533.501506/1‑94 (MQ=60)
GCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCC < SRR4302533.5664467/94‑1 (MQ=60)
GCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCC < SRR4302533.1399933/94‑1 (MQ=60)
GCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCC < SRR4302533.4110876/94‑1 (MQ=60)
GCGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCC > SRR4302533.1083873/1‑94 (MQ=60)
CGGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCA > SRR4302533.5609378/1‑94 (MQ=60)
GGGTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAG > SRR4302533.1786165/1‑94 (MQ=60)
GTCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCA < SRR4302533.931810/94‑1 (MQ=60)
TCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCATCCTCGATTTTCGCGTCGGTTGGGTTTTCCAGCAG < SRR4302533.3369796/94‑1 (MQ=60)
TCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAG > SRR4302533.5752453/1‑94 (MQ=60)
TCATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAG > SRR4302533.1161270/1‑94 (MQ=60)
CATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGG < SRR4302533.95948/94‑1 (MQ=60)
ATTTCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGT > SRR4302533.4767320/1‑94 (MQ=60)
tgcCGCGCGCGCCGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATT < SRR4302533.5053126/91‑1 (MQ=60)
TCACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATT > SRR4302533.2116114/1‑94 (MQ=60)
TCACGCGCGCGACGCGCCGCTTCACGGGCACGCGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATT < SRR4302533.1497844/94‑1 (MQ=60)
CACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGG‑TTTCCAGCAGGTATTCT > SRR4302533.6056921/1‑94 (MQ=60)
ACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCT < SRR4302533.5430140/94‑1 (MQ=60)
ACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCT < SRR4302533.6138551/94‑1 (MQ=60)
ACGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCT < SRR4302533.2180767/94‑1 (MQ=60)
CGCGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTG < SRR4302533.5070171/94‑1 (MQ=60)
CGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCC > SRR4302533.1617666/1‑94 (MQ=60)
CGCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCC < SRR4302533.2195227/94‑1 (MQ=60)
GCGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCA < SRR4302533.650788/94‑1 (MQ=60)
CGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAG > SRR4302533.169162/1‑94 (MQ=60)
CGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAG > SRR4302533.4701328/1‑94 (MQ=60)
CGCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAG > SRR4302533.4562313/1‑94 (MQ=60)
CCGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGC < SRR4302533.3903556/94‑1 (MQ=60)
CGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCA > SRR4302533.4039928/1‑94 (MQ=60)
CGACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCA > SRR4302533.2001027/1‑94 (MQ=60)
GACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAG > SRR4302533.1967217/1‑94 (MQ=60)
ACGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGT > SRR4302533.2583090/1‑94 (MQ=60)
CGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTT < SRR4302533.1198707/94‑1 (MQ=60)
CGCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTT < SRR4302533.6034487/94‑1 (MQ=60)
GCGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTC > SRR4302533.4732230/1‑94 (MQ=60)
CGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTCG < SRR4302533.4030198/94‑1 (MQ=60)
CGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTCG < SRR4302533.3974185/94‑1 (MQ=60)
CGCCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTCG > SRR4302533.5980441/1‑94 (MQ=60)
CCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTCGTT < SRR4302533.2183961/94‑1 (MQ=60)
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CGGATCGCGTTCCTGGCAGTCTGCCAGTTTGCCCGGCAGGCCCGCTAAGTCGAGCGCACCTTTACGGCGGGTCATTTCACGCGCGCGACGCGGCGCTTCACGGGCACGGGCAGCATCGATAATTTTGCCAACCACGATTTTCGCGTCGGTTGGGTTTTCCAGCAGGTATTCTGCCAGCAGTTCGTT > NC_000913/3876503‑3876688
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
