Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,897,445 |
T→C |
N265S (AAC→AGC) |
yieL ← |
putative xylanase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,897,445 | 0 | T | C | 100.0%
| 927.4
/ NA
| 284 | N265S (AAC→AGC) | yieL | putative xylanase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (149/135); total (149/135) |
Only 100 of 291 total aligned reads displayed.
TGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGTTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGCCC > NC_000913/3897355‑3897534
|
tGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCtc > 1:2203737/1‑93 (MQ=255)
tACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCtcatc > 1:5355787/1‑93 (MQ=255)
tACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCtcatc > 2:1521814/1‑93 (MQ=255)
tACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCtcatc < 1:3453064/93‑1 (MQ=255)
tACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCtcatc < 2:5821021/93‑1 (MQ=255)
tcctgCCTTGTGAAAGCCCTGCCAGCGCGAGCCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCtcatca < 2:3733573/89‑1 (MQ=255)
aCCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCtcatca < 2:2322631/93‑1 (MQ=255)
aCCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCtcatca > 2:3862591/1‑93 (MQ=255)
aCCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCtcatca < 2:4361889/93‑1 (MQ=255)
cccGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAg > 2:3194966/1‑93 (MQ=255)
ccGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGt > 2:6106525/1‑93 (MQ=255)
ccGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGt < 1:3941276/93‑1 (MQ=255)
cGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGtt < 2:77785/93‑1 (MQ=255)
gCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTc < 1:633083/93‑1 (MQ=255)
gCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTc > 1:3333562/1‑93 (MQ=255)
gCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTc < 1:2875552/93‑1 (MQ=255)
gCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTc > 2:3596688/1‑93 (MQ=255)
ccTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTcg > 1:6054713/1‑93 (MQ=255)
ccTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTcg < 2:3337305/93‑1 (MQ=255)
cTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTcgc > 2:1864098/1‑93 (MQ=255)
ttGTGAAAGCCCTGCCAGCGCGTGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTcgcg < 2:3930780/93‑1 (MQ=255)
tgAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATc < 2:402468/93‑1 (MQ=255)
tgAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATc < 2:3511091/93‑1 (MQ=255)
tgAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATc < 1:4545432/93‑1 (MQ=255)
gAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCt > 1:1222059/1‑93 (MQ=255)
aGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGcc < 2:1648219/93‑1 (MQ=255)
aGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGcc > 2:3275582/1‑93 (MQ=255)
gCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGccc > 2:4824774/1‑92 (MQ=255)
cTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCtt > 2:4568425/1‑93 (MQ=255)
cTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCtt > 1:2695845/1‑93 (MQ=255)
tGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCttt > 1:810762/1‑93 (MQ=255)
tGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCttt > 2:305717/1‑93 (MQ=255)
gCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTa < 1:945010/93‑1 (MQ=255)
gCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTa < 2:3223733/93‑1 (MQ=255)
ccAGCGCGCGTCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAg < 2:4160440/93‑1 (MQ=255)
aGCGCGCGGCCATCGGCATCTTTACGGACATTAAACCGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCa < 1:2031276/93‑1 (MQ=255)
gcgcgcGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCAt > 1:5894232/1‑93 (MQ=255)
cgcgcgGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCAtt < 1:4142331/93‑1 (MQ=255)
gcgGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAg < 2:4888154/93‑1 (MQ=255)
gcgGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAg > 1:1737782/1‑93 (MQ=255)
cATCGGCATCTTTACGGACATTAAAACTCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGAt < 1:5593013/93‑1 (MQ=255)
aTCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATa > 1:3020720/1‑93 (MQ=255)
aTCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATa > 2:6069966/1‑93 (MQ=255)
aTCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCACCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATa < 1:4789656/93‑1 (MQ=255)
ggCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATGATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATaaaa > 1:4446854/1‑93 (MQ=255)
gCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAg > 1:3255572/1‑93 (MQ=255)
cATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGa < 1:5807566/93‑1 (MQ=255)
cATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGa < 2:4395156/93‑1 (MQ=255)
cATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGa < 1:2270491/93‑1 (MQ=255)
cATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGa < 1:1963715/93‑1 (MQ=255)
aTCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGAc > 1:5185420/1‑93 (MQ=255)
tCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACt > 1:490036/1‑93 (MQ=255)
tCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACt > 1:4680441/1‑93 (MQ=255)
tCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACt > 2:1423282/1‑93 (MQ=255)
cTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGTATTCAGCGGATAAAAGACtt > 2:948122/1‑93 (MQ=255)
cTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACtt < 1:494719/93‑1 (MQ=255)
cTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACtt < 1:2519130/93‑1 (MQ=255)
cTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACtt < 2:5046118/93‑1 (MQ=255)
tttACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACttt > 2:1167926/1‑93 (MQ=255)
tttACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACttt > 2:4486070/1‑93 (MQ=255)
tttACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACttt > 2:4675712/1‑93 (MQ=255)
tttACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACttt > 1:2098016/1‑93 (MQ=255)
ttACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTa < 1:5211643/93‑1 (MQ=255)
tACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTAc < 1:2979942/93‑1 (MQ=255)
tACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTAc < 1:1075663/93‑1 (MQ=255)
ggACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTc > 2:2117195/1‑93 (MQ=255)
ggACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTc < 2:2274853/93‑1 (MQ=255)
gACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCt < 1:5980116/93‑1 (MQ=255)
aCATTAAACCGCTTGCTAATCAGCGGCATAATATCCCTCATCAGTCCGCGATCTGCCGCTTTACCATTCAGCGCATAAAAGACTTTACGTCtt < 2:1118740/93‑1 (MQ=255)
ttAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTcc > 1:1049496/1‑93 (MQ=255)
aaaaCGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTg < 1:1753089/93‑1 (MQ=255)
aaaaCGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTg > 2:5571246/1‑93 (MQ=255)
aaaaCGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTg > 2:2927459/1‑93 (MQ=255)
aaaCGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGa > 2:206080/1‑93 (MQ=255)
aaaCGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGa < 1:505387/93‑1 (MQ=255)
aCGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAgg > 2:2532039/1‑93 (MQ=255)
aCGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAAACTTTACGTCTTTCCTGAgg > 1:4018066/1‑93 (MQ=255)
cGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGc < 2:2419893/93‑1 (MQ=255)
gCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCa < 2:4996603/93‑1 (MQ=255)
cTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCAc > 2:1219224/1‑93 (MQ=255)
tGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGa < 2:4077377/93‑1 (MQ=255)
cTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGaaa < 1:3666642/93‑1 (MQ=255)
aaTCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATc < 1:3743362/93‑1 (MQ=255)
aTCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCt < 2:2729428/93‑1 (MQ=255)
aTCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCt < 2:2856341/93‑1 (MQ=255)
gCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCgg > 2:2618633/1‑93 (MQ=255)
gCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCgg > 1:2444619/1‑93 (MQ=255)
cGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCggg < 2:1745740/93‑1 (MQ=255)
gggATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGa < 1:2162139/93‑1 (MQ=255)
gggATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGa < 2:2638184/93‑1 (MQ=255)
ggATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAGAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGaa < 1:4610820/93‑1 (MQ=255)
gATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGaat > 1:3834227/1‑93 (MQ=255)
ataataTCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGaata < 2:64508/93‑1 (MQ=255)
ataataTCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGaata > 1:1426355/1‑93 (MQ=255)
taataTCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGaataa > 1:2580540/1‑93 (MQ=255)
taataTCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGaataa > 2:71684/1‑93 (MQ=255)
atatCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATg > 1:4269903/1‑93 (MQ=255)
atatCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATg > 1:1622144/1‑93 (MQ=255)
tatCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGc > 2:5262628/1‑93 (MQ=255)
tCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGccc < 2:1816316/93‑1 (MQ=255)
|
TGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGTTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGCCC > NC_000913/3897355‑3897534
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCCTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGTTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGCCCTTCG > NC_000913/3897352‑3897538
|
GCCTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGC > SRR4302533.1542550/1‑94 (MQ=60)
GCCTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGC > SRR4302533.794350/1‑94 (MQ=60)
CCTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCT < SRR4302533.2537092/94‑1 (MQ=60)
CCTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCT > SRR4302533.3912298/1‑94 (MQ=60)
CTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTC > SRR4302533.2217320/1‑94 (MQ=60)
TGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCA > SRR4302533.5361120/1‑94 (MQ=60)
TGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCA < SRR4302533.3340785/94‑1 (MQ=60)
GGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCAT > SRR4302533.4487623/1‑94 (MQ=60)
GTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATC > SRR4302533.2350384/1‑94 (MQ=60)
GTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATC > SRR4302533.5387937/1‑94 (MQ=60)
TACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCA < SRR4302533.3824483/94‑1 (MQ=60)
TACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCA < SRR4302533.3474383/94‑1 (MQ=60)
CCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGT > SRR4302533.2028333/1‑94 (MQ=60)
CCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTT < SRR4302533.3965325/94‑1 (MQ=60)
CCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTT < SRR4302533.175273/94‑1 (MQ=60)
CGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTC < SRR4302533.2825079/94‑1 (MQ=60)
CGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTC > SRR4302533.3354160/1‑94 (MQ=60)
GCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCG > SRR4302533.6091379/1‑94 (MQ=60)
GCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCG < SRR4302533.2464097/94‑1 (MQ=60)
GCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCG < SRR4302533.2893246/94‑1 (MQ=60)
GCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCG < SRR4302533.636808/94‑1 (MQ=60)
CCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGC > SRR4302533.4970743/1‑94 (MQ=60)
CTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCG > SRR4302533.4097993/1‑94 (MQ=60)
CTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATC < SRR4302533.6083355/94‑1 (MQ=60)
TGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCT < SRR4302533.4572960/94‑1 (MQ=60)
TGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCT > SRR4302533.1229388/1‑94 (MQ=60)
AAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGC > SRR4302533.910936/1‑94 (MQ=60)
AAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCC < SRR4302533.1068554/94‑1 (MQ=60)
AAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCC < SRR4302533.3873724/94‑1 (MQ=60)
CCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTT > SRR4302533.2712367/1‑94 (MQ=60)
CTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTT > SRR4302533.3861463/1‑94 (MQ=60)
CTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTT > SRR4302533.815516/1‑94 (MQ=60)
TGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTA > SRR4302533.5671019/1‑94 (MQ=60)
GCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATCATATCGCTCATCAGTTCGCGATCTGCCGCTTTAC > SRR4302533.4878727/1‑94 (MQ=60)
GCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAG < SRR4302533.5098908/94‑1 (MQ=60)
GCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAG < SRR4302533.5225497/94‑1 (MQ=60)
GCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAG < SRR4302533.950567/94‑1 (MQ=60)
AGCGCGCGGCCATCGGCATCTTTACGGACATTAAACCGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCAT < SRR4302533.2043813/94‑1 (MQ=60)
AGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCAT > SRR4302533.5031200/1‑94 (MQ=60)
AGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCAT > SRR4302533.5929831/1‑94 (MQ=60)
CGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTC < SRR4302533.4167447/94‑1 (MQ=60)
CGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTC > SRR4302533.4713718/1‑94 (MQ=60)
CGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTC < SRR4302533.988063/94‑1 (MQ=60)
CGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAG < SRR4302533.4707893/94‑1 (MQ=60)
CGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAG > SRR4302533.1748324/1‑94 (MQ=60)
CGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAG < SRR4302533.1750726/94‑1 (MQ=60)
CGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCATCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCG > SRR4302533.3397264/1‑94 (MQ=60)
CGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCG < SRR4302533.263935/94‑1 (MQ=60)
GGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGG > SRR4302533.3644515/1‑94 (MQ=60)
GCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGA > SRR4302533.4956876/1‑94 (MQ=60)
GCCACCGGCATCTTTACGGACATTAAAACGCTTTCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGA < SRR4302533.1362450/94‑1 (MQ=60)
CCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGAT > SRR4302533.2217138/1‑94 (MQ=60)
CATCGGCATCTTTACGGACATTAAAACTCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATA < SRR4302533.5626801/94‑1 (MQ=60)
CATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATA > SRR4302533.3039208/1‑94 (MQ=60)
ATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCACCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAA < SRR4302533.4818669/94‑1 (MQ=60)
TCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAA < SRR4302533.4683776/94‑1 (MQ=60)
TCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAA < SRR4302533.2933657/94‑1 (MQ=60)
TCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAA > SRR4302533.2499546/1‑94 (MQ=60)
CGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATGATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAA > SRR4302533.4473749/1‑94 (MQ=60)
CGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAA < SRR4302533.5355191/94‑1 (MQ=60)
CGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAA > SRR4302533.4565848/1‑94 (MQ=60)
GGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAG > SRR4302533.3275648/1‑94 (MQ=60)
GCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGA > SRR4302533.4141461/1‑94 (MQ=60)
GCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGA < SRR4302533.2268705/94‑1 (MQ=60)
CATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGAC < SRR4302533.2284541/94‑1 (MQ=60)
CATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGAC > SRR4302533.3307938/1‑94 (MQ=60)
CATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGAC < SRR4302533.2076827/94‑1 (MQ=60)
CATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGAC > SRR4302533.5216720/1‑94 (MQ=60)
CATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGAC > SRR4302533.5229796/1‑94 (MQ=60)
CATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGAC < SRR4302533.5842635/94‑1 (MQ=60)
CATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGAC > SRR4302533.4622506/1‑94 (MQ=60)
CATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGAC < SRR4302533.1975703/94‑1 (MQ=60)
ATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACT > SRR4302533.492966/1‑94 (MQ=60)
ATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACT > SRR4302533.4708804/1‑94 (MQ=60)
CTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTT > SRR4302533.2110960/1‑94 (MQ=60)
CTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTT < SRR4302533.2534652/94‑1 (MQ=60)
CTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTT < SRR4302533.497668/94‑1 (MQ=60)
CTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTT > SRR4302533.654214/1‑94 (MQ=60)
TTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTA > SRR4302533.6007957/1‑94 (MQ=60)
TTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTA < SRR4302533.1950652/94‑1 (MQ=60)
TTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTA < SRR4302533.1904222/94‑1 (MQ=60)
TTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTA < SRR4302533.2067909/94‑1 (MQ=60)
TTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTA > SRR4302533.6311674/1‑94 (MQ=60)
TTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTAC < SRR4302533.5243029/94‑1 (MQ=60)
TACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACG < SRR4302533.2943207/94‑1 (MQ=60)
TACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACG < SRR4302533.2998176/94‑1 (MQ=60)
TACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACG < SRR4302533.1082003/94‑1 (MQ=60)
CGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTC < SRR4302533.1536229/94‑1 (MQ=60)
CGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTC < SRR4302533.1654174/94‑1 (MQ=60)
GGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCT < SRR4302533.1265184/94‑1 (MQ=60)
GACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTT < SRR4302533.2582208/94‑1 (MQ=60)
GACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTT < SRR4302533.63704/94‑1 (MQ=60)
GACATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTT < SRR4302533.6016338/94‑1 (MQ=60)
CATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTC < SRR4302533.2724579/94‑1 (MQ=60)
ATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCCTTCAGCGGATAAAAGACTTTACGTCTTTCC > SRR4302533.1207714/1‑94 (MQ=60)
ATTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCC > SRR4302533.1055666/1‑94 (MQ=60)
TTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCT < SRR4302533.3734371/94‑1 (MQ=60)
TTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCT > SRR4302533.5575059/1‑94 (MQ=60)
TTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCT < SRR4302533.5480270/94‑1 (MQ=60)
TTAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCT < SRR4302533.2285742/94‑1 (MQ=60)
TAAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGATTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTG < SRR4302533.4381005/94‑1 (MQ=60)
AAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGA > SRR4302533.1687195/1‑94 (MQ=60)
AAAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGA < SRR4302533.1763767/94‑1 (MQ=60)
AAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAG < SRR4302533.4023858/94‑1 (MQ=60)
AAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAG < SRR4302533.508386/94‑1 (MQ=60)
AAACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAG < SRR4302533.3020251/94‑1 (MQ=60)
AACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGG < SRR4302533.2152482/94‑1 (MQ=60)
AACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGG < SRR4302533.3135011/94‑1 (MQ=60)
AACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAAACTTTACGTCTTTCCTGAGG > SRR4302533.4042529/1‑94 (MQ=60)
ACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGC < SRR4302533.896685/94‑1 (MQ=60)
ACGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGC > SRR4302533.384991/1‑94 (MQ=60)
CGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCA < SRR4302533.4233547/94‑1 (MQ=60)
CGCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCA > SRR4302533.807393/1‑94 (MQ=60)
GCTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCAC > SRR4302533.5208438/1‑94 (MQ=60)
CTTGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACG > SRR4302533.5926000/1‑94 (MQ=60)
TGCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAA > SRR4302533.372935/1‑94 (MQ=60)
GCTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAA < SRR4302533.2112305/94‑1 (MQ=60)
CTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAAT < SRR4302533.3689180/94‑1 (MQ=60)
CTAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAAT > SRR4302533.1553783/1‑94 (MQ=60)
TAATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATC < SRR4302533.3363899/94‑1 (MQ=60)
AATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCT < SRR4302533.3766321/94‑1 (MQ=60)
AATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCT > SRR4302533.4293923/1‑94 (MQ=60)
AATCAGCAGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCT < SRR4302533.2618252/94‑1 (MQ=60)
ATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTT > SRR4302533.2534961/1‑94 (MQ=60)
ATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTT > SRR4302533.5056090/1‑94 (MQ=60)
ATCAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTT > SRR4302533.951008/1‑94 (MQ=60)
CAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCG > SRR4302533.5928237/1‑94 (MQ=60)
CAGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCG < SRR4302533.3064306/94‑1 (MQ=60)
AGCGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGG > SRR4302533.2459708/1‑94 (MQ=60)
CGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGA > SRR4302533.5683242/1‑94 (MQ=60)
CGGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGA > SRR4302533.4914294/1‑94 (MQ=60)
CAGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGA > SRR4302533.5978633/1‑94 (MQ=60)
GGGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAA < SRR4302533.2175445/94‑1 (MQ=60)
GGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAGAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAAT < SRR4302533.4638752/94‑1 (MQ=60)
GGATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAAT > SRR4302533.3857658/1‑94 (MQ=60)
GATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATA > SRR4302533.1434978/1‑94 (MQ=60)
ATAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAA > SRR4302533.2596419/1‑94 (MQ=60)
TAATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAAT < SRR4302533.1161573/94‑1 (MQ=60)
AATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATG > SRR4302533.1631973/1‑94 (MQ=60)
AATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATG > SRR4302533.1992625/1‑94 (MQ=60)
AATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATG < SRR4302533.4008965/94‑1 (MQ=60)
AATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATG > SRR4302533.4295606/1‑94 (MQ=60)
ATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGC > SRR4302533.4450691/1‑94 (MQ=60)
ATATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGC > SRR4302533.3019273/1‑94 (MQ=60)
TATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGCC < SRR4302533.2214453/94‑1 (MQ=60)
ATCGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGCCC > SRR4302533.4634506/1‑94 (MQ=60)
CGCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGCCCTT > SRR4302533.1967398/1‑94 (MQ=60)
GCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGCCCTTC > SRR4302533.5116326/1‑94 (MQ=60)
GCTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGCCCTTC > SRR4302533.3620129/1‑94 (MQ=60)
CTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGCCCTTCG < SRR4302533.3919250/94‑1 (MQ=60)
CTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGCCCTTCG > SRR4302533.4146117/1‑94 (MQ=60)
CTCATCAGTTCGCGACCTGCCGCTTTAGCATTCAGCGAATAAAAGACTTAACGTTTTTCCTCAGGCACGAAATCTTCGGGAATAATGCCCTTCG < SRR4302533.824759/94‑1 (MQ=60)
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GCCTGGTACCCGCCTTGTGAAAGCCCTGCCAGCGCGCGGCCATCGGCATCTTTACGGACATTAAAACGCTTGCTAATCAGCGGGATAATATCGTTCATCAGTTCGCGATCTGCCGCTTTAGCATTCAGCGGATAAAAGACTTTACGTCTTTCCTGAGGCACGAAATCTTCGGGAATAATGCCCTTCG > NC_000913/3897352‑3897538
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
