Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,928,464 |
A→G |
L86P (CTT→CCT) |
yieN ← |
putative 2‑component regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,928,464 | 0 | A | G | 100.0%
| 629.2
/ NA
| 195 | L86P (CTT→CCT) | yieN | putative 2‑component regulator |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (103/92); total (103/92) |
Only 100 of 208 total aligned reads displayed.
ATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGG > NC_000913/3928374‑3928553
|
aTCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAggg < 1:4616387/93‑1 (MQ=255)
aTCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAggg > 1:3445751/1‑93 (MQ=255)
tctcATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAgggg > 1:1432770/1‑93 (MQ=255)
tctcATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAgggg < 1:2458409/93‑1 (MQ=255)
ctcATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGgggg < 2:629194/93‑1 (MQ=255)
cATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGAc < 1:51810/93‑1 (MQ=255)
cATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGAc > 1:3150288/1‑93 (MQ=255)
aTCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGAcc > 2:5007604/1‑93 (MQ=255)
tCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCa > 1:3738484/1‑93 (MQ=255)
tCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCa < 1:2150628/93‑1 (MQ=255)
ccAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCaa > 2:2130191/1‑93 (MQ=255)
cAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGAGCCTGAATAGAAGGGGGACCaaa > 2:191349/1‑93 (MQ=255)
gAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCaaaaa > 1:2018040/1‑93 (MQ=255)
aaaGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAAc > 2:735331/1‑93 (MQ=255)
gACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAActtc < 2:1543015/93‑1 (MQ=255)
aCAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAActtct < 1:2526256/93‑1 (MQ=255)
cAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAActtctt < 1:950041/93‑1 (MQ=255)
cAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAActtctt < 1:2555374/93‑1 (MQ=255)
aaTTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACttcttc < 2:5827814/93‑1 (MQ=255)
aaTTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACttcttc > 1:3121740/1‑93 (MQ=255)
aTTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTcc > 1:3014470/1‑93 (MQ=255)
aTTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTcc > 2:3330904/1‑93 (MQ=255)
tCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGc < 2:1278959/93‑1 (MQ=255)
cTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCg < 2:59016/93‑1 (MQ=255)
cTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCg > 1:3411125/1‑93 (MQ=255)
cTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTgg > 1:2383576/1‑93 (MQ=255)
ttCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGga < 1:1031694/93‑1 (MQ=255)
ttCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGga > 1:3786398/1‑93 (MQ=255)
tCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGgag < 2:3251322/93‑1 (MQ=255)
tCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGgag > 1:2907714/1‑93 (MQ=255)
ccGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGgaga > 2:108487/1‑93 (MQ=255)
cGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGaa > 2:3374215/1‑93 (MQ=255)
cGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGaa < 1:3566003/93‑1 (MQ=255)
gCAGGTAACCGCTGGTTAAACGTTCACAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGc < 2:2939045/93‑1 (MQ=255)
agttAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCgg < 2:5664154/90‑1 (MQ=255)
aGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCgg > 2:4638347/1‑93 (MQ=255)
aGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCgg > 2:3917116/1‑93 (MQ=255)
aGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCgg > 2:5539530/1‑93 (MQ=255)
aGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCgg > 2:2315980/1‑93 (MQ=255)
tAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGtc > 1:3764953/1‑93 (MQ=255)
tAACCGCTGGTTAAACGTTCAAAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGtc < 1:4937516/93‑1 (MQ=255)
aaCCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGtca < 1:1595348/93‑1 (MQ=255)
cGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGtcatca < 1:1066786/93‑1 (MQ=255)
cGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGtcatca < 2:3797353/93‑1 (MQ=255)
cGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGtcatca > 1:543411/1‑93 (MQ=255)
gCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAg < 2:4495386/93‑1 (MQ=255)
cTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGCAGCGGGTCATCAGa > 2:2752521/1‑93 (MQ=255)
cTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGa > 1:28581/1‑93 (MQ=255)
cTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGa < 1:4019211/93‑1 (MQ=255)
tGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGat > 2:352152/1‑93 (MQ=255)
tGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGat > 1:1279013/1‑93 (MQ=255)
tGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGat > 2:371727/1‑93 (MQ=255)
tGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGat < 2:4831197/93‑1 (MQ=255)
ggTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGata > 2:4772007/1‑93 (MQ=255)
gTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGatat < 1:6167395/93‑1 (MQ=255)
ttAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATAtt > 1:5003744/1‑93 (MQ=255)
tAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTc > 2:5462443/1‑93 (MQ=255)
tAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTc > 2:3142455/1‑93 (MQ=255)
tAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTc > 2:2032145/1‑93 (MQ=255)
aCGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCaaa < 2:2817726/93‑1 (MQ=255)
aCGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCaaa < 2:863744/93‑1 (MQ=255)
cGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAAc > 1:1667013/1‑93 (MQ=255)
cGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAAc > 1:4589894/1‑93 (MQ=255)
cGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAAc < 1:3052218/93‑1 (MQ=255)
ttCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAAcgc > 1:4295887/1‑93 (MQ=255)
aTAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAATCTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAAcgcgcg < 2:5357078/93‑1 (MQ=255)
aTAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAAcgcgcg < 1:3925890/93‑1 (MQ=255)
tAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCgg < 1:2644701/93‑1 (MQ=255)
aGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCggg < 2:4425708/93‑1 (MQ=255)
aGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCggg > 1:1794105/1‑93 (MQ=255)
gcCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCAt < 2:5383418/93‑1 (MQ=255)
cccTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCAtt > 1:4360172/1‑93 (MQ=255)
cccTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCAtt < 2:5560276/93‑1 (MQ=255)
ccTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTc < 1:5798736/93‑1 (MQ=255)
cgtCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCt < 1:2296296/91‑1 (MQ=255)
cTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCt > 1:6261553/1‑93 (MQ=255)
cTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCt < 1:3235940/93‑1 (MQ=255)
cTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCt < 1:5912915/93‑1 (MQ=255)
ttCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTg > 1:3036568/1‑93 (MQ=255)
ttCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTg > 1:4111751/1‑93 (MQ=255)
cATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGaa > 1:6074923/1‑93 (MQ=255)
aTCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGaaa > 2:1593656/1‑93 (MQ=255)
aTCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGaaa > 2:4011335/1‑93 (MQ=255)
tCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAg < 2:5724485/93‑1 (MQ=255)
cTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGaaatg < 2:6210741/93‑3 (MQ=255)
cTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAgg < 1:836754/93‑1 (MQ=255)
ttttAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGc > 2:4255530/1‑93 (MQ=255)
ttttAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGc < 2:832151/93‑1 (MQ=255)
tttAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCg < 2:4216888/93‑1 (MQ=255)
tAGCGCCTGAATAGAAGGGGGACCAAAAGCTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGaa < 2:1867191/93‑1 (MQ=255)
gcgcCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAAtt > 1:4872204/1‑93 (MQ=255)
gcgcCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAAtt > 1:4789788/1‑93 (MQ=255)
gcCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAAtttt > 2:1565917/1‑93 (MQ=255)
ccTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTa < 2:4102714/93‑1 (MQ=255)
cTGAATAGAAGGGTGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTaa < 1:5753984/93‑1 (MQ=255)
cTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTaa < 1:1101731/93‑1 (MQ=255)
tAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGcc > 1:862834/1‑93 (MQ=255)
tAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGcc > 2:5262124/1‑93 (MQ=255)
tAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGcc < 1:1242219/93‑1 (MQ=255)
gAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCgg > 2:3638303/1‑93 (MQ=255)
|
ATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGG > NC_000913/3928374‑3928553
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCG > NC_000913/3928371‑3928556
|
CAGATCTCATCCAGCAAGACCATTTCTGCTGCCGGCAGGTGCCCGCTGGTTAAACGTTCAGAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAG < SRR4302533.3044822/94‑1 (MQ=60)
AGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGG > SRR4302533.349492/1‑94 (MQ=60)
AGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGG < SRR4302533.3629913/94‑1 (MQ=60)
AGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGG < SRR4302533.508255/94‑1 (MQ=60)
GATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGG > SRR4302533.3467030/1‑94 (MQ=60)
ATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGG > SRR4302533.289720/1‑94 (MQ=60)
ATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGG > SRR4302533.1441427/1‑94 (MQ=60)
ATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGG < SRR4302533.4644341/94‑1 (MQ=60)
ATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCACTTTTTAGCGCCTGAATAGAAGGGG > SRR4302533.126943/1‑94 (MQ=60)
TCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCTCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGG > SRR4302533.2542195/1‑94 (MQ=60)
TCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGG < SRR4302533.2473577/94‑1 (MQ=60)
TCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGG < SRR4302533.5017286/94‑1 (MQ=60)
TCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGAC > SRR4302533.3169659/1‑94 (MQ=60)
CATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACC < SRR4302533.52160/94‑1 (MQ=60)
CATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACC > SRR4302533.2437905/1‑94 (MQ=60)
ATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCA > SRR4302533.3761411/1‑94 (MQ=60)
TCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAA < SRR4302533.2163872/94‑1 (MQ=60)
CAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAA > SRR4302533.3796549/1‑94 (MQ=60)
AGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAA > SRR4302533.2030474/1‑94 (MQ=60)
ACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTT < SRR4302533.2541809/94‑1 (MQ=60)
CAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTC < SRR4302533.955620/94‑1 (MQ=60)
CAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTC > SRR4302533.4617805/1‑94 (MQ=60)
CAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTC > SRR4302533.3140933/1‑94 (MQ=60)
CAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTC < SRR4302533.2571092/94‑1 (MQ=60)
AATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCC > SRR4302533.3032906/1‑94 (MQ=60)
ATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCG < SRR4302533.5981308/94‑1 (MQ=60)
TCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCG < SRR4302533.2478739/94‑1 (MQ=60)
TCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCG > SRR4302533.1560956/1‑94 (MQ=60)
TCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCG > SRR4302533.3432194/1‑94 (MQ=60)
CTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGT > SRR4302533.4681064/1‑94 (MQ=60)
GCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGG > SRR4302533.2398310/1‑94 (MQ=60)
CTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGA > SRR4302533.3809582/1‑94 (MQ=60)
TTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAG < SRR4302533.5807971/94‑1 (MQ=60)
TTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAG > SRR4302533.2925565/1‑94 (MQ=60)
TTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAG < SRR4302533.1037761/94‑1 (MQ=60)
TTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTACCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAG < SRR4302533.4457086/94‑1 (MQ=60)
CCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAA > SRR4302533.3988260/1‑94 (MQ=60)
CCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAA < SRR4302533.1324723/94‑1 (MQ=60)
CGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAG < SRR4302533.3587980/94‑1 (MQ=60)
CGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAG < SRR4302533.997486/94‑1 (MQ=60)
CAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGG > SRR4302533.382946/1‑94 (MQ=60)
CAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGG < SRR4302533.6164510/94‑1 (MQ=60)
GTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTC > SRR4302533.3788030/1‑94 (MQ=60)
TAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCA > SRR4302533.67508/1‑94 (MQ=60)
TAACCGCTGGTTAAACGTTCAAAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCA < SRR4302533.4967408/94‑1 (MQ=60)
AACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCAT > SRR4302533.3743588/1‑94 (MQ=60)
AACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCAT < SRR4302533.1605002/94‑1 (MQ=60)
CCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCA > SRR4302533.546637/1‑94 (MQ=60)
CCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGGCATCA > SRR4302533.3771192/1‑94 (MQ=60)
CGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAG < SRR4302533.3047654/94‑1 (MQ=60)
CGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAG < SRR4302533.1073055/94‑1 (MQ=60)
GCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGA > SRR4302533.28775/1‑94 (MQ=60)
GCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGA < SRR4302533.3065952/94‑1 (MQ=60)
CTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGAT > SRR4302533.1286698/1‑94 (MQ=60)
CTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGAT < SRR4302533.4043685/94‑1 (MQ=60)
TGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATA < SRR4302533.3203075/94‑1 (MQ=60)
TGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATA > SRR4302533.2219231/1‑94 (MQ=60)
GTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATT < SRR4302533.5505780/94‑1 (MQ=60)
GTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATT > SRR4302533.5034070/1‑94 (MQ=60)
GTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATT < SRR4302533.3160359/94‑1 (MQ=60)
GTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATT < SRR4302533.6204472/94‑1 (MQ=60)
TTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTC < SRR4302533.2138606/94‑1 (MQ=60)
TAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCA > SRR4302533.5170243/1‑94 (MQ=60)
AACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAA > SRR4302533.4343969/1‑94 (MQ=60)
ACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAAC > SRR4302533.1677084/1‑94 (MQ=60)
ACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAAC > SRR4302533.4617696/1‑94 (MQ=60)
ACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAAC < SRR4302533.2358790/94‑1 (MQ=60)
ACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAAC > SRR4302533.3100074/1‑94 (MQ=60)
CGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACG < SRR4302533.3070910/94‑1 (MQ=60)
CGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACG < SRR4302533.4243902/94‑1 (MQ=60)
GTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCCTCAGATATTCAAACGC > SRR4302533.4860023/1‑94 (MQ=60)
GTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGC > SRR4302533.3454109/1‑94 (MQ=60)
GTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGC > SRR4302533.4321725/1‑94 (MQ=60)
TCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGC > SRR4302533.3286008/1‑94 (MQ=60)
ATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGG < SRR4302533.3949860/94‑1 (MQ=60)
ATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGG < SRR4302533.4960760/94‑1 (MQ=60)
TAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGG < SRR4302533.2660952/94‑1 (MQ=60)
TAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGG > SRR4302533.1805024/1‑94 (MQ=60)
AGCGCCTTTCATCTTTTAGCGCTTGAATAGAAGGGGGACCAAAAGCTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGC < SRR4302533.859900/94‑1 (MQ=60)
CGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCAT > SRR4302533.653641/1‑94 (MQ=60)
CGCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCAT > SRR4302533.1830167/1‑94 (MQ=60)
GCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATT > SRR4302533.4386491/1‑94 (MQ=60)
GCCCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATT > SRR4302533.5330684/1‑94 (MQ=60)
CCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCT > SRR4302533.6298987/1‑94 (MQ=60)
CCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCT < SRR4302533.6207834/94‑1 (MQ=60)
CCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCT < SRR4302533.5833769/94‑1 (MQ=60)
CCTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCT < SRR4302533.1048814/94‑1 (MQ=60)
CTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTG > SRR4302533.2620599/1‑94 (MQ=60)
CTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTG > SRR4302533.3055147/1‑94 (MQ=60)
CTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTG < SRR4302533.3255880/94‑1 (MQ=60)
CTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTG > SRR4302533.4136744/1‑94 (MQ=60)
CTTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTG < SRR4302533.5948646/94‑1 (MQ=60)
CGTCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTG < SRR4302533.2310516/94‑1 (MQ=60)
TCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAA > SRR4302533.3383114/1‑94 (MQ=60)
TCATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAA > SRR4302533.6111668/1‑94 (MQ=60)
CATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAA > SRR4302533.5911664/1‑94 (MQ=60)
ATCTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAG < SRR4302533.1139653/94‑1 (MQ=60)
CTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGC < SRR4302533.841656/94‑1 (MQ=60)
CTTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGC < SRR4302533.2972987/94‑1 (MQ=60)
TTTTAGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCG < SRR4302533.947568/94‑1 (MQ=60)
AGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATT > SRR4302533.4901727/1‑94 (MQ=60)
AGCGCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATT > SRR4302533.4818802/1‑94 (MQ=60)
GCCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTA > SRR4302533.3478024/1‑94 (MQ=60)
CCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAA < SRR4302533.1096094/94‑1 (MQ=60)
CCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAA > SRR4302533.1777149/1‑94 (MQ=60)
CCTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAA < SRR4302533.4119142/94‑1 (MQ=60)
ACTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGAGAATTTTAA > SRR4302533.466996/1‑94 (MQ=60)
CTGAATAGAAGGGTGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAG < SRR4302533.5788700/94‑1 (MQ=60)
CTGAATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAG < SRR4302533.1108258/94‑1 (MQ=60)
ATAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCC > SRR4302533.867891/1‑94 (MQ=60)
TAGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCG < SRR4302533.1249639/94‑1 (MQ=60)
AGAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGG > SRR4302533.1644945/1‑94 (MQ=60)
GAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGG < SRR4302533.2775663/94‑1 (MQ=60)
GAAGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGG < SRR4302533.242345/94‑1 (MQ=60)
AGGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCG < SRR4302533.5046200/94‑1 (MQ=60)
|
CAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCG > NC_000913/3928371‑3928556
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
