Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I2 R1	1624	250.6	12620048	98.0%	12367647	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,483,536	T→C	intergenic (‑17/‑250)	pepA ← / → yjgP	aminopeptidase A/I/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,483,536	0	T	C	100.0%	1014.7 / NA	308	intergenic (‑17/‑250)	pepA/yjgP	aminopeptidase A/I/hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (136/172); total (136/172)

Only 100 of 310 total aligned reads displayed.

GGTTCGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAATCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTAACG  >  NC_000913/4483446‑4483625

   tCGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTaa                                                                                      <  2:1231618/93‑1 (MQ=255)

   tCGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTaa                                                                                      <  1:2320512/93‑1 (MQ=255)

    cGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTaaa                                                                                     <  1:4531442/93‑1 (MQ=255)

    cGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTaaa                                                                                     <  2:5277126/93‑1 (MQ=255)

     gAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTACAg                                                                                    >  2:4694402/1‑93 (MQ=255)

     gAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAg                                                                                    <  1:6212775/93‑1 (MQ=255)

     gAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAg                                                                                    <  1:3508191/93‑1 (MQ=255)

      aaGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGa                                                                                   >  2:227508/1‑93 (MQ=255)

       aGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGAc                                                                                  <  2:387382/93‑1 (MQ=255)

       aGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGAc                                                                                  <  2:3051662/93‑1 (MQ=255)

         aCGCCCACGACGATGCAGGCTCTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACaa                                                                                <  1:4509579/93‑1 (MQ=255)

         aCGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACaa                                                                                <  1:4808348/93‑1 (MQ=255)

          cGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAAc                                                                               <  1:2295172/93‑1 (MQ=255)

          cGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAAc                                                                               >  2:1469313/1‑93 (MQ=255)

           gCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAAcg                                                                              <  2:3555173/93‑1 (MQ=255)

           gCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAAcg                                                                              <  1:1805111/93‑1 (MQ=255)

            cccACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAAcgg                                                                             >  1:432976/1‑93 (MQ=255)

             ccACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAAcggc                                                                            <  2:5489379/93‑1 (MQ=255)

             ccACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAAcggc                                                                            >  1:4413655/1‑93 (MQ=255)

              cACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACCCCATGCACTACGCTCCTGAACCTTAAAGACAAcggcg                                                                           >  1:5807935/1‑93 (MQ=255)

               acgacgATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAAcggcgg                                                                          >  1:97802/1‑93 (MQ=255)

               acgacgATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAAcggcgg                                                                          <  2:322489/93‑1 (MQ=255)

                cgacgaTGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGt                                                                         <  2:3711281/93‑1 (MQ=255)

                cgacgaTGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGt                                                                         <  2:5117374/93‑1 (MQ=255)

                 gacgaTGCAGGCACTCCGCTGTTTCTCCTGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTg                                                                        <  1:6059658/93‑1 (MQ=255)

                 gacgaTGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTg                                                                        <  2:2684228/93‑1 (MQ=255)

                 gacgaTGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTg                                                                        >  1:5046872/1‑93 (MQ=255)

                     aTGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTa                                                                    <  1:302412/93‑1 (MQ=255)

                     aTGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTa                                                                    <  1:4976997/93‑1 (MQ=255)

                      tGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTAc                                                                   <  1:2589849/93‑1 (MQ=255)

                         aGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGa                                                                <  2:6306585/93‑1 (MQ=255)

                         aGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGa                                                                <  1:1186850/93‑1 (MQ=255)

                          ggCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGAt                                                               <  2:4826204/93‑1 (MQ=255)

                          ggCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGAt                                                               <  2:4564006/93‑1 (MQ=255)

                          ggCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGAt                                                               <  2:3341692/93‑1 (MQ=255)

                           gCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATa                                                              <  2:5081729/93‑1 (MQ=255)

                              cTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGTCTACAGATAGaa                                                           <  1:3402813/93‑1 (MQ=255)

                              cTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGaa                                                           >  1:5161591/1‑93 (MQ=255)

                               tCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAAt                                                          >  2:443308/1‑93 (MQ=255)

                               tCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAAt                                                          <  1:2143100/93‑1 (MQ=255)

                                 cGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTg                                                        >  2:4952390/1‑93 (MQ=255)

                                 cGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTg                                                        <  1:2887819/93‑1 (MQ=255)

                                  gCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTGCTGAACCTTAAAGACAACGGCGGAGGCTACAGATAGAATTGc                                                       >  2:4067295/1‑93 (MQ=255)

                                   cTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCa                                                      >  2:2934049/1‑93 (MQ=255)

                                    tGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCCCTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCaa                                                     <  2:2034399/93‑1 (MQ=255)

                                    tGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCaa                                                     <  1:2515914/93‑1 (MQ=255)

                                     gTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAg                                                    >  1:2951603/1‑93 (MQ=255)

                                      tttCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAgt                                                   >  2:5761590/1‑92 (MQ=255)

                                      tttCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGc                                                   <  2:4089627/93‑1 (MQ=255)

                                      tttCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGc                                                   <  2:4315181/93‑1 (MQ=255)

                                        tctcCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCtt                                                 <  2:738456/93‑1 (MQ=255)

                                          tcCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTc                                               >  1:3136864/1‑93 (MQ=255)

                                              ggCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGTATTGTAAGCTTTCGTaa                                           >  1:1510884/1‑93 (MQ=255)

                                              ggCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTaa                                           >  1:2074702/1‑93 (MQ=255)

                                               gCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAAc                                          <  1:3106184/93‑1 (MQ=255)

                                                cTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACt                                         >  2:3391314/1‑93 (MQ=255)

                                                 tACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTc                                        <  2:1596896/93‑1 (MQ=255)

                                                    cGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATg                                     <  2:4257397/93‑1 (MQ=255)

                                                     gCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGt                                    <  1:2981466/93‑1 (MQ=255)

                                                     gCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGt                                    >  2:5431101/1‑93 (MQ=255)

                                                       tttttACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTcc                                  >  1:3942315/1‑93 (MQ=255)

                                                       tttttACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTcc                                  >  2:1388343/1‑93 (MQ=255)

                                                         tttACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGc                                <  2:1853417/93‑1 (MQ=255)

                                                            acacTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGt                             <  2:5730494/93‑1 (MQ=255)

                                                            acacTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGt                             >  1:896731/1‑93 (MQ=255)

                                                            acacTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGt                             <  1:560068/93‑1 (MQ=255)

                                                             cacTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGtt                            <  2:4894728/93‑1 (MQ=255)

                                                             cacTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGtt                            <  1:3602676/93‑1 (MQ=255)

                                                              acTAAACTTCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTg                           >  2:6200137/1‑93 (MQ=255)

                                                               cTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGc                          <  1:5369587/93‑1 (MQ=255)

                                                                 aaaCTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATTTCCGCTGTTGCGa                        <  1:2701794/93‑1 (MQ=255)

                                                                 aaaCTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGa                        <  1:4879685/93‑1 (MQ=255)

                                                                 aaaCTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGa                        <  2:346600/93‑1 (MQ=255)

                                                                  aaCTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGAt                       >  2:5284152/1‑93 (MQ=255)

                                                                  aaCTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGAt                       >  2:273103/1‑93 (MQ=255)

                                                                      ccATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACt                   >  2:5539509/1‑93 (MQ=255)

                                                                      ccATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACt                   <  2:2481958/93‑1 (MQ=255)

                                                                       cATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACtt                  >  2:523885/1‑93 (MQ=255)

                                                                         tGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCg                <  2:1790407/93‑1 (MQ=255)

                                                                          gCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCgt               <  1:3275027/93‑1 (MQ=255)

                                                                          gCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCgt               >  1:6116612/1‑93 (MQ=255)

                                                                          gCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCgt               >  2:2771500/1‑93 (MQ=255)

                                                                           cACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCgtg              <  1:1326680/93‑1 (MQ=255)

                                                                           cACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCgtg              >  1:3892062/1‑93 (MQ=255)

                                                                            aCTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCgtgt             <  2:4758859/93‑1 (MQ=255)

                                                                             cTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGtt            <  1:2406175/93‑1 (MQ=255)

                                                                              tACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTTACTCATGTCCGCTGTTGCGATGACTTCGTGTTa           >  2:2415670/1‑93 (MQ=255)

                                                                              tACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTa           >  1:5996789/1‑93 (MQ=255)

                                                                                 gCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAAATCATGTCCGCTGTTGCGATGACTTCGTGTTAATc        >  2:1257211/1‑93 (MQ=255)

                                                                                  cTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCt       <  1:1644997/93‑1 (MQ=255)

                                                                                  cTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCt       <  1:4146012/93‑1 (MQ=255)

                                                                                  cTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCt       <  1:736276/93‑1 (MQ=255)

                                                                                   tCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCtt      >  1:4275704/1‑93 (MQ=255)

                                                                                    ccTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTa     >  1:5025571/1‑93 (MQ=255)

                                                                                    ccTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTa     >  1:191564/1‑93 (MQ=255)

                                                                                    ccTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATATTa     <  1:2775163/93‑1 (MQ=255)

                                                                                     cTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTaa    <  2:3974404/93‑1 (MQ=255)

                                                                                     cTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTaa    <  1:1121082/93‑1 (MQ=255)

                                                                                      tGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTAAc   <  2:5810884/93‑1 (MQ=255)

                                                                                       gAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTAACg  >  1:1559218/1‑93 (MQ=255)

GGTTCGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAATCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTAACG  >  NC_000913/4483446‑4483625

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CGTGGTTCGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAATCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTAACGTTAT  >  NC_000913/4483443‑4483629

CGTGGTTCGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAAC                                                                                               >  SRR4302533.4037055/1‑94 (MQ=60)

CGTGGTTCGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAAC                                                                                               <  SRR4302533.3725099/94‑1 (MQ=60)

CGTGGTTCGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAAC                                                                                               <  SRR4302533.5157688/94‑1 (MQ=60)

 GTGGTTCGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACC                                                                                              >  SRR4302533.2500831/1‑94 (MQ=60)

 GTGGTTCGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACC                                                                                              <  SRR4302533.161711/94‑1 (MQ=60)

 GTGGTTCGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACC                                                                                              <  SRR4302533.2082062/94‑1 (MQ=60)

  TGGTTCGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCT                                                                                             >  SRR4302533.5056118/1‑94 (MQ=60)

   GGTTCGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTT                                                                                            <  SRR4302533.4064447/94‑1 (MQ=60)

   GGTTCGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTT                                                                                            >  SRR4302533.3423578/1‑94 (MQ=60)

   GGTTCGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTT                                                                                            >  SRR4302533.1573745/1‑94 (MQ=60)

      TCGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAA                                                                                         <  SRR4302533.2334877/94‑1 (MQ=60)

      TCGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAA                                                                                         <  SRR4302533.827476/94‑1 (MQ=60)

       CGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAG                                                                                        <  SRR4302533.4558881/94‑1 (MQ=60)

        GAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGA                                                                                       <  SRR4302533.6250028/94‑1 (MQ=60)

        GAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGA                                                                                       >  SRR4302533.6107735/1‑94 (MQ=60)

        GAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGA                                                                                       <  SRR4302533.2693927/94‑1 (MQ=60)

        GAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGA                                                                                       >  SRR4302533.815200/1‑94 (MQ=60)

        GAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGA                                                                                       <  SRR4302533.3529823/94‑1 (MQ=60)

         AAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGAC                                                                                      <  SRR4302533.1800029/94‑1 (MQ=60)

          AGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACA                                                                                     <  SRR4302533.2231488/94‑1 (MQ=60)

            ACGCCCACGACGATGCAGGCTCTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAAC                                                                                   <  SRR4302533.4536891/94‑1 (MQ=60)

            ACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAAC                                                                                   <  SRR4302533.2397339/94‑1 (MQ=60)

            ACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAAC                                                                                   <  SRR4302533.4837459/94‑1 (MQ=60)

            ACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAAC                                                                                   <  SRR4302533.3018024/94‑1 (MQ=60)

             CGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACG                                                                                  <  SRR4302533.2477567/94‑1 (MQ=60)

             CGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACG                                                                                  <  SRR4302533.500846/94‑1 (MQ=60)

             CGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACG                                                                                  <  SRR4302533.2309386/94‑1 (MQ=60)

              GCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGG                                                                                 <  SRR4302533.1816100/94‑1 (MQ=60)

              GCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGG                                                                                 >  SRR4302533.435556/1‑94 (MQ=60)

              GACCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGG                                                                                 >  SRR4302533.1215743/1‑94 (MQ=60)

               CCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGC                                                                                >  SRR4302533.4440307/1‑94 (MQ=60)

                CCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACCCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCG                                                                               >  SRR4302533.5843007/1‑94 (MQ=60)

                 CACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGG                                                                              >  SRR4302533.98409/1‑94 (MQ=60)

                  ACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGT                                                                             <  SRR4302533.4339761/94‑1 (MQ=60)

                  ACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGT                                                                             >  SRR4302533.3183230/1‑94 (MQ=60)

                  ACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGT                                                                             >  SRR4302533.4537125/1‑94 (MQ=60)

                  ACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGT                                                                             <  SRR4302533.3599809/94‑1 (MQ=60)

                   CGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTG                                                                            <  SRR4302533.3148134/94‑1 (MQ=60)

                   CGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTG                                                                            <  SRR4302533.3253126/94‑1 (MQ=60)

                   CGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTG                                                                            >  SRR4302533.5077401/1‑94 (MQ=60)

                    GACGATGCAGGCACTCCGCTGTTTCTCCTGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGG                                                                           <  SRR4302533.6096340/94‑1 (MQ=60)

                    GACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGG                                                                           >  SRR4302533.941367/1‑94 (MQ=60)

                    GACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGG                                                                           >  SRR4302533.2587137/1‑94 (MQ=60)

                       GATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTA                                                                        >  SRR4302533.5981788/1‑94 (MQ=60)

                       GATGCAGGCACTCCGCTGTTTCTCCGGCCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGAGGCTA                                                                        >  SRR4302533.2583497/1‑94 (MQ=60)

                        ATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTAC                                                                       <  SRR4302533.2072472/94‑1 (MQ=60)

                        ATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTAC                                                                       <  SRR4302533.304261/94‑1 (MQ=60)

                        ATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTAC                                                                       <  SRR4302533.5007176/94‑1 (MQ=60)

                         TGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACA                                                                      <  SRR4302533.2605765/94‑1 (MQ=60)

                            AGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGAT                                                                   >  SRR4302533.2273330/1‑94 (MQ=60)

                            AGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGAT                                                                   <  SRR4302533.1193972/94‑1 (MQ=60)

                             GGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATA                                                                  <  SRR4302533.3989561/94‑1 (MQ=60)

                             CGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATA                                                                  <  SRR4302533.978963/94‑1 (MQ=60)

                              GCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAG                                                                 <  SRR4302533.3716910/94‑1 (MQ=60)

                               CACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGA                                                                >  SRR4302533.6326853/1‑94 (MQ=60)

                                ACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAA                                                               >  SRR4302533.5192753/1‑94 (MQ=60)

                                ACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAA                                                               >  SRR4302533.6056045/1‑94 (MQ=60)

                                 CTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGTCTACAGATAGAAT                                                              <  SRR4302533.3423825/94‑1 (MQ=60)

                                 CTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAAT                                                              >  SRR4302533.5279144/1‑94 (MQ=60)

                                  TCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATT                                                             <  SRR4302533.3922165/94‑1 (MQ=60)

                                  TCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATT                                                             <  SRR4302533.3142356/94‑1 (MQ=60)

                                  TCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATT                                                             <  SRR4302533.2156302/94‑1 (MQ=60)

                                   CCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTG                                                            >  SRR4302533.2345665/1‑94 (MQ=60)

                                   CCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTG                                                            <  SRR4302533.1177343/94‑1 (MQ=60)

                                   CCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTG                                                            <  SRR4302533.1341176/94‑1 (MQ=60)

                                   CCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTG                                                            >  SRR4302533.4387253/1‑94 (MQ=60)

                                    CGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGC                                                           >  SRR4302533.5469041/1‑94 (MQ=60)

                                    CGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGC                                                           >  SRR4302533.2183540/1‑94 (MQ=60)

                                    CGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGC                                                           <  SRR4302533.2905571/94‑1 (MQ=60)

                                     GCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCA                                                          >  SRR4302533.155263/1‑94 (MQ=60)

                                       TGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAG                                                        >  SRR4302533.2969655/1‑94 (MQ=60)

                                       TGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAG                                                        <  SRR4302533.5166431/94‑1 (MQ=60)

                                       TGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAG                                                        <  SRR4302533.2531418/94‑1 (MQ=60)

                                       TGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAG                                                        <  SRR4302533.3451768/94‑1 (MQ=60)

                                         TTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAGCGGCGGTGGCTACAGATAGAATTGCAAGCT                                                      <  SRR4302533.2988091/94‑1 (MQ=60)

                                         TTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCT                                                      <  SRR4302533.4452881/94‑1 (MQ=60)

                                          TTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTT                                                     >  SRR4302533.1627011/1‑94 (MQ=60)

                                            CTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTC                                                   >  SRR4302533.3156151/1‑94 (MQ=60)

                                            CTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTC                                                   <  SRR4302533.3841674/94‑1 (MQ=60)

                                            CTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTC                                                   >  SRR4302533.2135772/1‑94 (MQ=60)

                                            CTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTC                                                   >  SRR4302533.48993/1‑94 (MQ=60)

                                             TCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCG                                                  <  SRR4302533.2913927/94‑1 (MQ=60)

                                             TCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCG                                                  >  SRR4302533.1358837/1‑94 (MQ=60)

                                               CGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTA                                                >  SRR4302533.2891649/1‑94 (MQ=60)

                                                GGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGTATTGTAAGCTTTCGTAA                                               >  SRR4302533.1519990/1‑94 (MQ=60)

                                                GGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAA                                               >  SRR4302533.2087476/1‑94 (MQ=60)

                                                  GCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACT                                             <  SRR4302533.4887905/94‑1 (MQ=60)

                                                  GCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACT                                             <  SRR4302533.3125275/94‑1 (MQ=60)

                                                    TACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCA                                           <  SRR4302533.4920909/94‑1 (MQ=60)

                                                     ACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCAT                                          <  SRR4302533.2770290/94‑1 (MQ=60)

                                                     ACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCAT                                          >  SRR4302533.5104105/1‑94 (MQ=60)

                                                      CCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATG                                         <  SRR4302533.1531974/94‑1 (MQ=60)

                                                      CCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATG                                         <  SRR4302533.4298926/94‑1 (MQ=60)

                                                      CCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATG                                         >  SRR4302533.5800476/1‑94 (MQ=60)

                                                      CCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATG                                         >  SRR4302533.3014064/1‑94 (MQ=60)

                                                       CGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACCGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGT                                        >  SRR4302533.504689/1‑94 (MQ=60)

                                                        GCTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTC                                       <  SRR4302533.2999703/94‑1 (MQ=60)

                                                         CTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCC                                      >  SRR4302533.3966369/1‑94 (MQ=60)

                                                         CTTTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCC                                      >  SRR4302533.6183872/1‑94 (MQ=60)

                                                          TTTTTACACTAAACTCCATGCATTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCG                                     >  SRR4302533.2901380/1‑94 (MQ=60)

                                                           TTTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGC                                    >  SRR4302533.5849463/1‑94 (MQ=60)

                                                            TTTACACTAAACTCCATGCTCTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCT                                   <  SRR4302533.3018891/94‑1 (MQ=60)

                                                            TTTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCT                                   <  SRR4302533.2724543/94‑1 (MQ=60)

                                                             TTACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTG                                  >  SRR4302533.2154329/1‑94 (MQ=60)

                                                              TACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGT                                 >  SRR4302533.901995/1‑94 (MQ=60)

                                                               ACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTT                                <  SRR4302533.563393/94‑1 (MQ=60)

                                                               ACACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTT                                >  SRR4302533.2940752/1‑94 (MQ=60)

                                                                CACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTG                               <  SRR4302533.3624849/94‑1 (MQ=60)

                                                                 ACTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGC                              >  SRR4302533.422552/1‑94 (MQ=60)

                                                                  CTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCG                             <  SRR4302533.5806283/94‑1 (MQ=60)

                                                                  CTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCG                             <  SRR4302533.5145112/94‑1 (MQ=60)

                                                                  CTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCG                             <  SRR4302533.4558744/94‑1 (MQ=60)

                                                                  CTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCG                             >  SRR4302533.1883444/1‑94 (MQ=60)

                                                                  CTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCG                             <  SRR4302533.1231816/94‑1 (MQ=60)

                                                                  CTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCG                             <  SRR4302533.523886/94‑1 (MQ=60)

                                                                  CTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCG                             >  SRR4302533.4348249/1‑94 (MQ=60)

                                                                  CTAAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCG                             <  SRR4302533.5401849/94‑1 (MQ=60)

                                                                    AAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATTTCCGCTGTTGCGAT                           <  SRR4302533.2718369/94‑1 (MQ=60)

                                                                    AAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGAT                           >  SRR4302533.2315584/1‑94 (MQ=60)

                                                                    AAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGAT                           <  SRR4302533.4909250/94‑1 (MQ=60)

                                                                    AAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGAT                           <  SRR4302533.4248513/94‑1 (MQ=60)

                                                                    AAACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGAT                           >  SRR4302533.969460/1‑94 (MQ=60)

                                                                     AACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATG                          >  SRR4302533.2695212/1‑94 (MQ=60)

                                                                      ACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGA                         <  SRR4302533.6177064/94‑1 (MQ=60)

                                                                      ACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGA                         >  SRR4302533.2979425/1‑94 (MQ=60)

                                                                      ACTCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGA                         <  SRR4302533.2523159/94‑1 (MQ=60)

                                                                        TCCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACT                       >  SRR4302533.310751/1‑94 (MQ=60)

                                                                         CCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTT                      <  SRR4302533.1876500/94‑1 (MQ=60)

                                                                         CCATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTT                      <  SRR4302533.3476925/94‑1 (MQ=60)

                                                                          CATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTC                     <  SRR4302533.3053934/94‑1 (MQ=60)

                                                                           ATGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCG                    <  SRR4302533.6092587/94‑1 (MQ=60)

                                                                            TGCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGT                   >  SRR4302533.6153512/1‑94 (MQ=60)

                                                                             GCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTG                  >  SRR4302533.3915818/1‑94 (MQ=60)

                                                                             GCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTG                  <  SRR4302533.3919729/94‑1 (MQ=60)

                                                                             GCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTG                  >  SRR4302533.5533993/1‑94 (MQ=60)

                                                                             GCACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTG                  <  SRR4302533.3295245/94‑1 (MQ=60)

                                                                              CACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGT                 <  SRR4302533.1801700/94‑1 (MQ=60)

                                                                              CACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGT                 <  SRR4302533.1334639/94‑1 (MQ=60)

                                                                               ACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTT                <  SRR4302533.4432807/94‑1 (MQ=60)

                                                                               ACTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTT                <  SRR4302533.5001029/94‑1 (MQ=60)

                                                                                CTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTA               <  SRR4302533.3553856/94‑1 (MQ=60)

                                                                                CTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTA               >  SRR4302533.6033110/1‑94 (MQ=60)

                                                                                CTACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTA               <  SRR4302533.2421037/94‑1 (MQ=60)

                                                                                  ACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAAT             <  SRR4302533.5067726/94‑1 (MQ=60)

                                                                                  ACGCTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAAT             <  SRR4302533.115985/94‑1 (MQ=60)

                                                                                     CTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTT          >  SRR4302533.2009836/1‑94 (MQ=60)

                                                                                     CTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTT          <  SRR4302533.740606/94‑1 (MQ=60)

                                                                                     CTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTT          >  SRR4302533.4301423/1‑94 (MQ=60)

                                                                                     CTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTT          <  SRR4302533.4171136/94‑1 (MQ=60)

                                                                                     CTCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTT          <  SRR4302533.1654958/94‑1 (MQ=60)

                                                                                      TCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTA         >  SRR4302533.192769/1‑94 (MQ=60)

                                                                                      TCCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTA         >  SRR4302533.5056003/1‑94 (MQ=60)

                                                                                       CCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTAA        >  SRR4302533.4782190/1‑94 (MQ=60)

                                                                                       CCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTAA        <  SRR4302533.4824655/94‑1 (MQ=60)

                                                                                       CCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTAA        <  SRR4302533.3335455/94‑1 (MQ=60)

                                                                                       CCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTAA        <  SRR4302533.4525952/94‑1 (MQ=60)

                                                                                       CCTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATATTAA        <  SRR4302533.2792207/94‑1 (MQ=60)

                                                                                        CTGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTAAC       <  SRR4302533.1127734/94‑1 (MQ=60)

                                                                                         TGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTAACG      <  SRR4302533.6133638/94‑1 (MQ=60)

                                                                                         TGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTAACG      >  SRR4302533.1568605/1‑94 (MQ=60)

                                                                                         TGAACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTAACG      <  SRR4302533.2319553/94‑1 (MQ=60)

                                                                                           AACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTAACGTT    >  SRR4302533.2668504/1‑94 (MQ=60)

                                                                                           AACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTAACGTT    <  SRR4302533.6107305/94‑1 (MQ=60)

                                                                                            ACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTAACGTTA   >  SRR4302533.2081482/1‑94 (MQ=60)

                                                                                            ACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTAACGTTA   >  SRR4302533.3881637/1‑94 (MQ=60)

                                                                                            ACCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTAACGTTA   <  SRR4302533.5393288/94‑1 (MQ=60)

                                                                                             CCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTAACGTTAT  <  SRR4302533.692361/94‑1 (MQ=60)

CGTGGTTCGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCATGCACTACGCTCCTGAATCTTAAAGACAACGGCGGTGGCTACAGATAGAATTGCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTAACGTTAT  >  NC_000913/4483443‑4483629

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`