Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,484,261 |
T→C |
L159P (CTG→CCG) |
yjgP → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,484,261 | 0 | T | C | 100.0%
| 668.9
/ NA
| 206 | L159P (CTG→CCG) | yjgP | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (82/124); total (82/124) |
Only 100 of 217 total aligned reads displayed.
ATGAAGTGTTAGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCTGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCTTCTGTGGTGG > NC_000913/4484171‑4484350
|
gAAGTGTTAGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTc > 1:176133/1‑93 (MQ=255)
gAAGTGTTAGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTc > 2:3200339/1‑93 (MQ=255)
aaGTGTTAGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCa < 2:4947587/93‑1 (MQ=255)
aGTGTTAGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCAt > 1:5022805/1‑93 (MQ=255)
aGTGTTAGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCAt < 2:4317409/93‑1 (MQ=255)
tgtTAGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCg > 1:4187306/1‑93 (MQ=255)
tgtTAGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCg > 2:1811493/1‑93 (MQ=255)
tgtTAGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCg > 2:3982955/1‑93 (MQ=255)
ttAGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGaa > 2:3024755/1‑93 (MQ=255)
ttAGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGaa > 1:2004918/1‑93 (MQ=255)
tAGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGaaa < 2:5379517/93‑1 (MQ=255)
tAGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGaaa > 2:3120247/1‑93 (MQ=255)
tAGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGaaa < 1:16139/93‑1 (MQ=255)
aGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAg < 1:373634/93‑1 (MQ=255)
aGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGGTCATCGAAAg > 2:2130932/1‑93 (MQ=255)
aGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGGGCCGTTCATCGAAAg > 1:3843658/1‑93 (MQ=255)
gCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGc < 2:1217394/93‑1 (MQ=255)
aGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGt < 1:1462332/93‑1 (MQ=255)
aGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGt > 2:5717282/1‑93 (MQ=255)
gAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGtt < 1:3180525/93‑1 (MQ=255)
agcgaaagcgaaCCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGa < 2:1091908/93‑1 (MQ=255)
agcgaaagcgaaCCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGa < 1:4033399/93‑1 (MQ=255)
agcgaaagcgaaCCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGa < 2:4154686/93‑1 (MQ=255)
gcgaaagcgatCCCTGTCATGGCGGCGCTGGCGCAAGGGCATGTACAGAAAGCGACTAAGGGAAGCTCGGTGCTGTTCATCGAAAGCATTGAc < 2:6086510/93‑1 (MQ=255)
gcgaaagcgaaCCCTGGCATGGCGGCGCTTGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGAc > 1:2592191/1‑93 (MQ=255)
gcgaaagcgaaCCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGAc > 2:3877477/1‑93 (MQ=255)
gcgaaagcgaaCCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGAc < 2:4654167/93‑1 (MQ=255)
gcgaaagcgaaCCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGAc > 1:4280686/1‑93 (MQ=255)
cgaaagcgaaCCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACg < 1:138792/93‑1 (MQ=255)
aaagcgaaCCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGACAGCGTTGACGGc > 2:2472337/1‑93 (MQ=255)
aaagcgaaCCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGc > 1:107274/1‑93 (MQ=255)
aaagcgaaCCCTGGCATGGCGGAGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGc < 2:5889613/93‑1 (MQ=255)
aagcgaaCCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACggga > 1:5493840/1‑91 (MQ=255)
aagcgaaCCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCa < 2:531043/93‑1 (MQ=255)
agcgacCCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAg < 1:4521636/93‑1 (MQ=255)
agcgaaCCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAg > 1:3650316/1‑93 (MQ=255)
agcgaaCCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACCGccg > 2:3757961/1‑91 (MQ=255)
gcgaaCCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGc < 2:2566088/93‑1 (MQ=255)
gaaCCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGa < 1:1646455/93‑1 (MQ=255)
gaaCCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGa > 1:2164492/1‑93 (MQ=255)
aaCCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGAt < 2:4577093/93‑1 (MQ=255)
cTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCa > 1:3822893/1‑93 (MQ=255)
ggCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCaaa > 2:2753399/1‑93 (MQ=255)
ggCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCaaa < 1:180049/93‑1 (MQ=255)
cATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGa < 2:2387880/93‑1 (MQ=255)
aTGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGAt < 2:4070983/93‑1 (MQ=255)
aTGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGAt > 2:4701258/1‑93 (MQ=255)
tGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGAtg < 2:2826222/93‑1 (MQ=255)
gggcggcGCTGGCGGAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGAtg < 1:853585/92‑1 (MQ=255)
cggcgCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATgtgt < 2:1305877/93‑1 (MQ=255)
cgcTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTcc < 1:673205/93‑1 (MQ=255)
cgcTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTcc < 1:4450200/93‑1 (MQ=255)
gcTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCt > 2:856566/1‑93 (MQ=255)
cTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTc < 2:1188899/93‑1 (MQ=255)
cTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATCTGTTCCTc < 2:6120139/93‑1 (MQ=255)
tGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTcg < 2:3394705/93‑1 (MQ=255)
tGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTcg < 1:4135863/93‑1 (MQ=255)
gcgcAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTcgcg < 1:5535542/93‑1 (MQ=255)
gcAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCa < 2:652929/93‑1 (MQ=255)
cAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCaa < 1:5941196/93‑1 (MQ=255)
aaGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCaaa > 1:1568784/1‑93 (MQ=255)
aaGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCaaa > 1:3439092/1‑93 (MQ=255)
gggCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAAtt < 2:1648125/93‑1 (MQ=255)
gggCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAAtt < 2:2412983/93‑1 (MQ=255)
gggCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAAtt > 1:5588910/1‑93 (MQ=255)
ggCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTc < 1:1365291/93‑1 (MQ=255)
gCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCg > 1:243030/1‑93 (MQ=255)
cAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGa < 2:5285354/93‑1 (MQ=255)
cAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGa > 2:2534905/1‑93 (MQ=255)
aaTGCCAGCAAGCGACTAATGTCAGCTCGGTGCCGTTCATCGAAAGCATTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGAc < 1:3911735/93‑1 (MQ=255)
aTTCCAGCAAGCGACTATTGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGAcc < 1:3373682/93‑1 (MQ=255)
aTTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGAcc > 1:6048590/1‑93 (MQ=255)
ttCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCa > 2:1449093/1‑93 (MQ=255)
ccAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCaaa > 1:103052/1‑93 (MQ=255)
cAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCaaaa < 2:547565/93‑1 (MQ=255)
cAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCaaaa > 2:520225/1‑93 (MQ=255)
aGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAg > 2:3380938/1‑93 (MQ=255)
aGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAg > 1:5180002/1‑93 (MQ=255)
gCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAgg < 1:2316560/93‑1 (MQ=255)
aGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTaa < 2:4207922/93‑1 (MQ=255)
aGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTaa < 1:1979341/93‑1 (MQ=255)
aGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTaa < 1:939548/93‑1 (MQ=255)
gCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAAt > 2:4429644/1‑93 (MQ=255)
gCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAAt > 2:939131/1‑93 (MQ=255)
aCTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCa > 1:4888859/1‑93 (MQ=255)
cTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCAc < 2:5081062/93‑1 (MQ=255)
aTGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTc > 1:6019148/1‑93 (MQ=255)
tGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTcc < 1:3024525/93‑1 (MQ=255)
tGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTcc > 2:6022362/1‑93 (MQ=255)
ggCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCt < 2:3504802/93‑1 (MQ=255)
ggCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCt < 1:6200781/93‑1 (MQ=255)
ggCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCt < 2:4268028/93‑1 (MQ=255)
gCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCTTCtg < 1:1172190/93‑1 (MQ=255)
gCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCTTCtg > 1:3777406/1‑93 (MQ=255)
cTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCTTCtgt < 1:1148080/93‑1 (MQ=255)
cTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCTTCtgt < 1:2894505/93‑1 (MQ=255)
tCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCTTCtgtg > 2:5005460/1‑93 (MQ=255)
cGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCTTCTgtgg < 2:1929427/93‑1 (MQ=255)
gTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCTTCTgtggtg > 2:1006244/1‑93 (MQ=255)
tGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCTTCTgtggtgg < 1:3311510/93‑1 (MQ=255)
|
ATGAAGTGTTAGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCTGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCTTCTGTGGTGG > NC_000913/4484171‑4484350
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GATGAAGTGTTAGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCTGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCTTCTGTGGTGGTGGC > NC_000913/4484170‑4484354
|
GATGAAGTGTTAGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGT < SRR4302533.4163049/94‑1 (MQ=60)
TGAAGTGTTAGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTC > SRR4302533.177240/1‑94 (MQ=60)
GAAGTGTTAGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCA < SRR4302533.1802292/94‑1 (MQ=60)
AAGTGTTAGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCAT > SRR4302533.5053223/1‑94 (MQ=60)
AAGTGTTAGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGGTCAT > SRR4302533.3898447/1‑94 (MQ=60)
AGTGTTAGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATC < SRR4302533.3279277/94‑1 (MQ=60)
GTGTTAGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCG > SRR4302533.4212662/1‑94 (MQ=60)
GTTAGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAA < SRR4302533.923018/94‑1 (MQ=60)
GTTAGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAA > SRR4302533.1158811/1‑94 (MQ=60)
GTTAGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAA > SRR4302533.2017266/1‑94 (MQ=60)
TAGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAG < SRR4302533.16254/94‑1 (MQ=60)
TAGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGGGCCGTTCATCGAAAG > SRR4302533.3867136/1‑94 (MQ=60)
AGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGC < SRR4302533.375892/94‑1 (MQ=60)
AGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTT < SRR4302533.4274640/94‑1 (MQ=60)
AGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTT < SRR4302533.1895156/94‑1 (MQ=60)
AGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTT < SRR4302533.1471149/94‑1 (MQ=60)
GAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTG < SRR4302533.3200090/94‑1 (MQ=60)
GAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTG < SRR4302533.3821820/94‑1 (MQ=60)
AGCGAAAGCGAACCCTGGCATGGCGGCGCTTGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGAC > SRR4302533.2608117/1‑94 (MQ=60)
AGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGAC < SRR4302533.4057950/94‑1 (MQ=60)
AGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGAC > SRR4302533.4306420/1‑94 (MQ=60)
AGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGAC < SRR4302533.4519032/94‑1 (MQ=60)
AGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGAC < SRR4302533.3343328/94‑1 (MQ=60)
GCGAAAGCGAACCCTGGCATGGCGGTGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACG < SRR4302533.767981/94‑1 (MQ=60)
GCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACG < SRR4302533.5062415/94‑1 (MQ=60)
CGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGG > SRR4302533.2848373/1‑94 (MQ=60)
CGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGG < SRR4302533.139674/94‑1 (MQ=60)
GAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGC > SRR4302533.107950/1‑94 (MQ=60)
AAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGGA > SRR4302533.5526978/1‑94 (MQ=60)
AAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCA < SRR4302533.932654/94‑1 (MQ=60)
AAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAG > SRR4302533.3672761/1‑94 (MQ=60)
AGCGACCCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGC < SRR4302533.4549014/94‑1 (MQ=60)
GCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCG < SRR4302533.6011197/94‑1 (MQ=60)
CGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGA > SRR4302533.3774405/1‑94 (MQ=60)
CGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGA > SRR4302533.2177808/1‑94 (MQ=60)
GAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGAT < SRR4302533.1656425/94‑1 (MQ=60)
ACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTT < SRR4302533.224333/94‑1 (MQ=60)
ACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTT > SRR4302533.4835684/1‑94 (MQ=60)
CCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCA > SRR4302533.1105427/1‑94 (MQ=60)
CCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCA > SRR4302533.3846264/1‑94 (MQ=60)
CTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAA > SRR4302533.3548372/1‑94 (MQ=60)
GGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAG < SRR4302533.5287427/94‑1 (MQ=60)
GGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAG < SRR4302533.1387479/94‑1 (MQ=60)
GGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAG < SRR4302533.181173/94‑1 (MQ=60)
GCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGA < SRR4302533.6101017/94‑1 (MQ=60)
GGGCGGCGCTGGCGGAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGT < SRR4302533.858584/94‑1 (MQ=60)
GGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTG < SRR4302533.2738877/94‑1 (MQ=60)
GCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGT < SRR4302533.1433002/94‑1 (MQ=60)
GCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGT < SRR4302533.1605876/94‑1 (MQ=60)
GGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTC < SRR4302533.4074466/94‑1 (MQ=60)
GGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTC > SRR4302533.3728635/1‑94 (MQ=60)
GCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCC < SRR4302533.3170246/94‑1 (MQ=60)
CGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCT < SRR4302533.677180/94‑1 (MQ=60)
CGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCT < SRR4302533.3651970/94‑1 (MQ=60)
CGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCT < SRR4302533.4477109/94‑1 (MQ=60)
CGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCT > SRR4302533.1887314/1‑94 (MQ=60)
GCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTC > SRR4302533.437632/1‑94 (MQ=60)
CTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAATGATGTGTTCCTCG < SRR4302533.3428015/94‑1 (MQ=60)
CTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCG > SRR4302533.985481/1‑94 (MQ=60)
TGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGC < SRR4302533.4160964/94‑1 (MQ=60)
GCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGC < SRR4302533.5568965/94‑1 (MQ=60)
CAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAA > SRR4302533.3460331/1‑94 (MQ=60)
CAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAA > SRR4302533.1578231/1‑94 (MQ=60)
CAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAA < SRR4302533.5977124/94‑1 (MQ=60)
AAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAAT < SRR4302533.2928318/94‑1 (MQ=60)
AAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAAT < SRR4302533.4631080/94‑1 (MQ=60)
AGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATT > SRR4302533.5622676/1‑94 (MQ=60)
GTCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCG < SRR4302533.1060017/94‑1 (MQ=60)
GGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCG < SRR4302533.1373500/94‑1 (MQ=60)
GGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCG > SRR4302533.244536/1‑94 (MQ=60)
AATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACC > SRR4302533.6085236/1‑94 (MQ=60)
AATGCCAGCAAGCGACTAATGTCAGCTCGGTGCCGTTCATCGAAAGCATTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACC < SRR4302533.3935624/94‑1 (MQ=60)
ATTCCAGCAAGCGACTATTGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCA < SRR4302533.3394517/94‑1 (MQ=60)
ATTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCA < SRR4302533.5542553/94‑1 (MQ=60)
TTCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAA < SRR4302533.5570183/94‑1 (MQ=60)
TCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAA > SRR4302533.5842356/1‑94 (MQ=60)
TCCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAA > SRR4302533.103697/1‑94 (MQ=60)
CCAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAA > SRR4302533.2012465/1‑94 (MQ=60)
CAGCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAG > SRR4302533.5211284/1‑94 (MQ=60)
GCAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGT < SRR4302533.2330902/94‑1 (MQ=60)
CAAGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTA < SRR4302533.1195127/94‑1 (MQ=60)
AGCGACTAATGGCCGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAAT < SRR4302533.2040499/94‑1 (MQ=60)
AGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAAT < SRR4302533.945069/94‑1 (MQ=60)
AGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAAT < SRR4302533.1683943/94‑1 (MQ=60)
AGCGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAAT < SRR4302533.1991462/94‑1 (MQ=60)
CGACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGC < SRR4302533.6065559/94‑1 (MQ=60)
GACTAATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCA > SRR4302533.4918481/1‑94 (MQ=60)
CTAATGGCAGCTCGGTGCCGTGCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACG < SRR4302533.2359908/94‑1 (MQ=60)
AATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTC > SRR4302533.6055622/1‑94 (MQ=60)
AATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTC < SRR4302533.2450613/94‑1 (MQ=60)
ATGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCC > SRR4302533.6309756/1‑94 (MQ=60)
TGGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCT < SRR4302533.3043029/94‑1 (MQ=60)
GGCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCTT < SRR4302533.6237973/94‑1 (MQ=60)
GCAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCTTC > SRR4302533.3856719/1‑94 (MQ=60)
CAGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCTTCT > SRR4302533.3946148/1‑94 (MQ=60)
AGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCTTCTG > SRR4302533.3800553/1‑94 (MQ=60)
AGCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCTTCTG > SRR4302533.5018894/1‑94 (MQ=60)
GCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCTTCTGT < SRR4302533.163768/94‑1 (MQ=60)
GCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCTTCTGT < SRR4302533.1179227/94‑1 (MQ=60)
GCTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCTTCTGT > SRR4302533.1520994/1‑94 (MQ=60)
CTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCTTCTGTG < SRR4302533.4056376/94‑1 (MQ=60)
CTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCTTCTGTG < SRR4302533.1154935/94‑1 (MQ=60)
CTCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCTTCTGTG < SRR4302533.2912290/94‑1 (MQ=60)
TCGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCTTCTGTGG > SRR4302533.5956686/1‑94 (MQ=60)
CGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCTTCTGTGGT < SRR4302533.1436090/94‑1 (MQ=60)
CGGTGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGAACGTCCTTCTGTGGG > SRR4302533.4191571/1‑94 (MQ=60)
TGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCTTCTGTGGTGGT < SRR4302533.3331960/94‑1 (MQ=60)
TGCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCTTCTGTGGTGGT > SRR4302533.5337019/1‑94 (MQ=60)
GCCGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCTTCTGTGGTGGTG < SRR4302533.681371/94‑1 (MQ=60)
CGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCTTCTGTGGTGGTGGC < SRR4302533.1875076/94‑1 (MQ=60)
|
GATGAAGTGTTAGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCTGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCTTCTGTGGTGGTGGC > NC_000913/4484170‑4484354
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
