Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,561,348 |
A→G |
C49C (TGT→TGC) |
b4563 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,561,348 | 0 | A | G | 99.5%
| 608.5
/ ‑3.8
| 194 | coding (147/258 nt) | b4563 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (92/101); minor base . (0/1); total (92/102) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.80e-01 |
Only 100 of 201 total aligned reads displayed.
ATGTGCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGACAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAACGC > NC_000913/4561258‑4561437
|
aTGTGCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCa > 1:3453006/1‑93 (MQ=255)
tgtgCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAg < 1:6278673/93‑1 (MQ=255)
tgtgCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAg > 1:2054702/1‑93 (MQ=255)
gtgCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAgg > 2:111323/1‑93 (MQ=255)
tgCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGt < 1:4806732/93‑1 (MQ=255)
gCAATTCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTc < 2:1941685/93‑1 (MQ=255)
cAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCa < 1:1539698/93‑1 (MQ=255)
cAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCa < 1:1608516/93‑1 (MQ=255)
cAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCa < 1:3036156/93‑1 (MQ=255)
aTGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGc > 1:3279144/1‑93 (MQ=255)
aTGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGc > 2:5274818/1‑93 (MQ=255)
tGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGcc > 2:6130317/1‑93 (MQ=255)
tGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGcc > 2:5457515/1‑93 (MQ=255)
aGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCaaa < 1:3565555/93‑1 (MQ=255)
gcgcCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAAt > 1:5360778/1‑93 (MQ=255)
ccAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCa > 1:4712725/1‑93 (MQ=255)
gACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATaa < 2:4402347/93‑1 (MQ=255)
acacCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAAc < 1:4595486/93‑1 (MQ=255)
cacCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAAcc > 1:6126470/1‑93 (MQ=255)
cacCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAAcc > 1:3902649/1‑93 (MQ=255)
acCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGTATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAAccc < 2:4064471/93‑1 (MQ=255)
acCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAAccc > 2:1424440/1‑93 (MQ=255)
acCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAAccc < 1:4635230/93‑1 (MQ=255)
acCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAAccc > 2:253781/1‑93 (MQ=255)
acCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAAccc < 1:5715719/93‑1 (MQ=255)
cATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGc < 1:4949973/93‑1 (MQ=255)
cATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGc < 1:402296/93‑1 (MQ=255)
aTCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCa < 1:179684/93‑1 (MQ=255)
aTCCTGCTGGCAAAAAATTGCCTCAGTCAGCCCAGGGATCCCCCATTGTATTTCCCCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCa < 1:284239/93‑1 (MQ=255)
gctgGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAgccgc > 2:2145723/1‑93 (MQ=255)
ctgGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAgccgcc > 1:6205233/1‑93 (MQ=255)
tgGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGccgccg > 1:845663/1‑93 (MQ=255)
tgGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGccgccg < 1:1863360/93‑1 (MQ=255)
gCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCcgcg > 2:2046011/1‑93 (MQ=255)
aaTAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTa < 2:5740890/93‑1 (MQ=255)
aTAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTaa > 1:1898641/1‑93 (MQ=255)
aTAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTaa > 1:4530558/1‑93 (MQ=255)
tAAATTGACTCAGTCAGCCCAGGGATCTCCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTaaa < 1:2708762/93‑1 (MQ=255)
tAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTaaa < 2:5192122/93‑1 (MQ=255)
tAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTaaa < 2:5970663/93‑1 (MQ=255)
aTTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCa > 2:3587766/1‑93 (MQ=255)
aTTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCa > 2:4487365/1‑93 (MQ=255)
tGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGG‑CAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACgg < 2:626806/93‑1 (MQ=255)
gACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACgg < 1:3779866/93‑1 (MQ=255)
gACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACgg > 1:250122/1‑93 (MQ=255)
cagtcagCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGaa < 2:5005137/93‑1 (MQ=255)
cagtcagCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCAAGGGGaa > 2:4301161/1‑93 (MQ=255)
cagtcagCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCACAGCCGCCGCGTAAATCACGGGGaa < 2:3142237/93‑1 (MQ=255)
gtcagCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAata < 1:713248/93‑1 (MQ=255)
tcagCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAatat > 2:1712296/1‑93 (MQ=255)
tcagCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAatat < 2:2068961/93‑1 (MQ=255)
tcagCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAatat < 1:5598173/93‑1 (MQ=255)
cagCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATc < 2:785003/93‑1 (MQ=255)
agCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCg < 1:972203/93‑1 (MQ=255)
agCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCg > 2:201754/1‑93 (MQ=255)
gCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGc < 1:2347400/93‑1 (MQ=255)
cccAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCt < 2:2183198/93‑1 (MQ=255)
cccAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCt < 1:4839244/93‑1 (MQ=255)
cccAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCt < 2:6084859/93‑1 (MQ=255)
cAGGGATCCCCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGa < 1:5272239/93‑1 (MQ=255)
cAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATACCCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGa < 2:3676008/93‑1 (MQ=255)
cAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGa < 2:189255/93‑1 (MQ=255)
cAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGa < 2:4855978/93‑1 (MQ=255)
aGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGAc < 1:4409142/93‑1 (MQ=255)
gATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGGAGCCGCCGCGTAAATCACGGGGAATATCGCTGAcggg > 2:2321573/1‑91 (MQ=255)
tCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATCACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGaa < 2:5358835/93‑1 (MQ=255)
tCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGaa > 1:412831/1‑93 (MQ=255)
cACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGaaa > 1:2979855/1‑93 (MQ=255)
ccccATTGTATTTCCGCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGaaaa < 2:1802415/92‑1 (MQ=255)
aCCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGaaaa < 2:5581263/93‑1 (MQ=255)
aCCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGaaaa > 1:3310366/1‑93 (MQ=255)
cccATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAg > 1:5226785/1‑93 (MQ=255)
ccATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATTACCCGCAGCCGCCGCGTAAATCACGGGGAATATTGATGACGCGAACAgc > 2:5932977/1‑92 (MQ=255)
cATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTc < 2:1358205/93‑1 (MQ=255)
cATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTc < 1:1196462/93‑1 (MQ=255)
cATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTc > 1:1003351/1‑93 (MQ=255)
cATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTc < 1:5438338/93‑1 (MQ=255)
aTTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCa < 1:381223/93‑1 (MQ=255)
aTTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCa < 2:3526168/93‑1 (MQ=255)
aTTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCa < 2:1497502/93‑1 (MQ=255)
aTTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCa > 1:631719/1‑93 (MQ=255)
ttGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTGAt > 1:3817352/1‑93 (MQ=255)
ttGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCAt > 1:3139165/1‑93 (MQ=255)
ttGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAAACCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCAt > 1:4432670/1‑93 (MQ=255)
tGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATg < 2:4137405/93‑1 (MQ=255)
tGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATg < 1:1932033/93‑1 (MQ=255)
tGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATg < 1:2759690/93‑1 (MQ=255)
gcaTTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGc > 2:2851756/3‑93 (MQ=255)
tttCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCg > 2:4436638/1‑93 (MQ=255)
ttCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCACCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGc > 1:3383894/1‑93 (MQ=255)
ccTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGctg < 2:46088/93‑1 (MQ=255)
ccTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGctg < 1:5549699/93‑1 (MQ=255)
cTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGAAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATCCCCGctgc > 1:3955617/1‑93 (MQ=255)
tCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGctgcc > 2:3050086/1‑93 (MQ=255)
gCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGctgcctg > 1:6026411/1‑93 (MQ=255)
cGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCa > 1:1386180/1‑93 (MQ=255)
ggggggGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCaa > 2:2943173/1‑93 (MQ=255)
ggggggCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAAc > 2:3506671/1‑93 (MQ=255)
ggggggCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAAc < 1:5975140/93‑1 (MQ=255)
ggggGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAACg > 1:2185523/1‑93 (MQ=255)
|
ATGTGCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGACAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAACGC > NC_000913/4561258‑4561437
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTAATGTGCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGACAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAACGCTTTG > NC_000913/4561255‑4561441
|
GTAATGTGCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGG > SRR4302533.1061078/1‑94 (MQ=60)
GTAATGTGCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGG > SRR4302533.1573757/1‑94 (MQ=60)
TAATGTGCAATGCAGCGCCAGACGCCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGC > SRR4302533.99891/1‑94 (MQ=60)
TAATGTGCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGC < SRR4302533.3576604/94‑1 (MQ=60)
AATGTGCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCA > SRR4302533.5735352/1‑94 (MQ=60)
AATGTGCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCA > SRR4302533.3474325/1‑94 (MQ=60)
AATGTGCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCA > SRR4302533.1621475/1‑94 (MQ=60)
ATGTGCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAG > SRR4302533.2067377/1‑94 (MQ=60)
ATGTGCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAG > SRR4302533.1558048/1‑94 (MQ=60)
ATGTGCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAG > SRR4302533.3420895/1‑94 (MQ=60)
TGTGCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGG < SRR4302533.6316158/94‑1 (MQ=60)
TGTGCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGG < SRR4302533.3934067/94‑1 (MQ=60)
TGCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTC < SRR4302533.4835836/94‑1 (MQ=60)
CAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAG > SRR4302533.2459358/1‑94 (MQ=60)
CAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAG < SRR4302533.1618275/94‑1 (MQ=60)
CAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAG < SRR4302533.3054734/94‑1 (MQ=60)
CAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAG < SRR4302533.1548970/94‑1 (MQ=60)
AATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGC > SRR4302533.3299389/1‑94 (MQ=60)
AATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGC > SRR4302533.5283852/1‑94 (MQ=60)
AGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAAT < SRR4302533.3587529/94‑1 (MQ=60)
AGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAAT > SRR4302533.5392976/1‑94 (MQ=60)
CGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGC < SRR4302533.72581/94‑1 (MQ=60)
CGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGC < SRR4302533.382501/94‑1 (MQ=60)
GCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCA > SRR4302533.4741287/1‑94 (MQ=60)
AGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAA > SRR4302533.6318194/1‑94 (MQ=60)
ACGCCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACC < SRR4302533.2735644/94‑1 (MQ=60)
ACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACC < SRR4302533.4507227/94‑1 (MQ=60)
ACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACC < SRR4302533.4623325/94‑1 (MQ=60)
ACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACC > SRR4302533.6163395/1‑94 (MQ=60)
ACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACC > SRR4302533.1521811/1‑94 (MQ=60)
ACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACC > SRR4302533.3926483/1‑94 (MQ=60)
ACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCG < SRR4302533.4663316/94‑1 (MQ=60)
ACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCG > SRR4302533.2089577/1‑94 (MQ=60)
ACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCG < SRR4302533.5750241/94‑1 (MQ=60)
CATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCA < SRR4302533.404721/94‑1 (MQ=60)
CATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCA > SRR4302533.6245795/1‑94 (MQ=60)
CATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCA < SRR4302533.4979953/94‑1 (MQ=60)
CATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCA < SRR4302533.1888885/94‑1 (MQ=60)
CATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCA > SRR4302533.4703727/1‑94 (MQ=60)
ATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAG > SRR4302533.1917076/1‑94 (MQ=60)
ATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAG < SRR4302533.180808/94‑1 (MQ=60)
ATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAG < SRR4302533.4924744/94‑1 (MQ=60)
ATCCTGCTGGCAAAAAATTGCCTCAGTCAGCCCAGGGATCCCCCATTGTATTTCCCCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAG < SRR4302533.285978/94‑1 (MQ=60)
CCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCC > SRR4302533.4655469/1‑94 (MQ=60)
GCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCC > SRR4302533.6242447/1‑94 (MQ=60)
CTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCG < SRR4302533.484772/94‑1 (MQ=60)
CTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCG > SRR4302533.850610/1‑94 (MQ=60)
TGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGC < SRR4302533.1874727/94‑1 (MQ=60)
GCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGT < SRR4302533.1871211/94‑1 (MQ=60)
GCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGT > SRR4302533.3361159/1‑94 (MQ=60)
AATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAA < SRR4302533.3151672/94‑1 (MQ=60)
AATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAA > SRR4302533.1910232/1‑94 (MQ=60)
AATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAA > SRR4302533.4557992/1‑94 (MQ=60)
ATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAA > SRR4302533.2887805/1‑94 (MQ=60)
TAAATTGACTCAGTCAGCCCAGGGATCTCCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAAT < SRR4302533.2725384/94‑1 (MQ=60)
AATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCA < SRR4302533.6212847/94‑1 (MQ=60)
AATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCA < SRR4302533.4442863/94‑1 (MQ=60)
TGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGG > SRR4302533.251666/1‑94 (MQ=60)
GACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGG < SRR4302533.3803023/94‑1 (MQ=60)
GACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGG < SRR4302533.5416113/94‑1 (MQ=60)
ACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGG < SRR4302533.4412286/94‑1 (MQ=60)
CTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGA < SRR4302533.5814426/94‑1 (MQ=60)
TCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAA < SRR4302533.947475/94‑1 (MQ=60)
GTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATAT < SRR4302533.717456/94‑1 (MQ=60)
GTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATAT < SRR4302533.3892652/94‑1 (MQ=60)
GTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATAT < SRR4302533.3019812/94‑1 (MQ=60)
TCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATC < SRR4302533.5631997/94‑1 (MQ=60)
AGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGC < SRR4302533.977912/94‑1 (MQ=60)
GCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCT < SRR4302533.2361924/94‑1 (MQ=60)
GCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCT < SRR4302533.4101109/94‑1 (MQ=60)
GCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCT < SRR4302533.1945833/94‑1 (MQ=60)
CCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTG < SRR4302533.4868576/94‑1 (MQ=60)
CCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCGAAATGCATAACCCGCAGCAGCCGCGTAAATCACGGGGCATATAGCTGA > SRR4302533.1270580/1‑94 (MQ=60)
CCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGA < SRR4302533.4602682/94‑1 (MQ=60)
CCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCAGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGA > SRR4302533.5615525/1‑94 (MQ=60)
CAGGGATCCCCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGAC < SRR4302533.5303856/94‑1 (MQ=60)
CAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGAC < SRR4302533.4008285/94‑1 (MQ=60)
CAGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGAC < SRR4302533.3292173/94‑1 (MQ=60)
AGGGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACG < SRR4302533.4435768/94‑1 (MQ=60)
GGATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCG < SRR4302533.4995883/94‑1 (MQ=60)
ATCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAA > SRR4302533.415312/1‑94 (MQ=60)
TCACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAA > SRR4302533.2998089/1‑94 (MQ=60)
CACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAA > SRR4302533.3330806/1‑94 (MQ=60)
ACCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAG > SRR4302533.5258235/1‑94 (MQ=60)
CCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGT > SRR4302533.5472263/1‑94 (MQ=60)
CCCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGT > SRR4302533.2704486/1‑94 (MQ=60)
CCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTC > SRR4302533.1009215/1‑94 (MQ=60)
CCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTC > SRR4302533.658920/1‑94 (MQ=60)
CCATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTC > SRR4302533.383768/1‑94 (MQ=60)
CATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCA < SRR4302533.1203651/94‑1 (MQ=60)
CATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCA > SRR4302533.635439/1‑94 (MQ=60)
CATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCA < SRR4302533.5471093/94‑1 (MQ=60)
CATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCA > SRR4302533.6063800/1‑94 (MQ=60)
ATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTGAT > SRR4302533.3840693/1‑94 (MQ=60)
ATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCAT > SRR4302533.3158463/1‑94 (MQ=60)
ATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCAT < SRR4302533.383519/94‑1 (MQ=60)
ATTGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAAACCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCAT > SRR4302533.4459465/1‑94 (MQ=60)
TGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGC < SRR4302533.1943818/94‑1 (MQ=60)
TGTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGC < SRR4302533.2776604/94‑1 (MQ=60)
GTATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCC > SRR4302533.380018/1‑94 (MQ=60)
TATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCC > SRR4302533.3567/1‑94 (MQ=60)
ATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCG > SRR4302533.4803006/1‑94 (MQ=60)
ATTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCG > SRR4302533.6034479/1‑94 (MQ=60)
TTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGC < SRR4302533.2216229/94‑1 (MQ=60)
TTTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCACCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGC > SRR4302533.3404785/1‑94 (MQ=60)
TTCCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCT < SRR4302533.3325274/94‑1 (MQ=60)
CCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGC < SRR4302533.5583211/94‑1 (MQ=60)
CCTCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGAAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATCCCCGCTGC > SRR4302533.3979731/1‑94 (MQ=60)
TCGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCT < SRR4302533.2822430/94‑1 (MQ=60)
CGCCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTG > SRR4302533.6062929/1‑94 (MQ=60)
CCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCA > SRR4302533.1394521/1‑94 (MQ=60)
CCGGGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCA > SRR4302533.1093728/1‑94 (MQ=60)
GGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAACG < SRR4302533.6011309/94‑1 (MQ=60)
GGGGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAACG > SRR4302533.2198995/1‑94 (MQ=60)
GGGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAACGCT < SRR4302533.5383595/94‑1 (MQ=60)
GGGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAACGCTT > SRR4302533.4303682/1‑94 (MQ=60)
GGCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAACGCTTT < SRR4302533.2312865/94‑1 (MQ=60)
GCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAACGCTTTG < SRR4302533.875825/94‑1 (MQ=60)
GCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAACGCTTTG < SRR4302533.1439517/94‑1 (MQ=60)
GCAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAACGCTTTG < SRR4302533.5062026/94‑1 (MQ=60)
GCAGGCCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAACGCTTTG > SRR4302533.3124364/1‑94 (MQ=60)
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GTAATGTGCAATGCAGCGCCAGACACCATCCTGCTGGCAATAAATTGACTCAGTCAGCCCAGGGATCACCCATTGTATTTCCTCGCCGGGGGGACAGGTCAGCCAAATGCATAACCCGCAGCCGCCGCGTAAATCACGGGGAATATCGCTGACGCGAAAAGTCATGCCCGCTGCCTGCAACGCTTTG > NC_000913/4561255‑4561441
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
