Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,562,600 |
T→C |
T274A (ACC→GCC) |
yjiM ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,562,600 | 0 | T | C | 100.0%
| 747.3
/ NA
| 239 | T274A (ACC→GCC) | yjiM | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (138/101); total (138/101) |
Only 100 of 252 total aligned reads displayed.
AGGAGCAGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGTGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGGTGA > NC_000913/4562510‑4562689
|
aGGAGCAGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGgcgc > 2:5725334/1‑93 (MQ=255)
ggcgcagcCAATCGCCAGATATTTACCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCa < 2:1485712/90‑1 (MQ=255)
ggAGCAGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCa < 2:2681609/93‑1 (MQ=255)
ggAGCAGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCa > 1:2303240/1‑93 (MQ=255)
gAGCAGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGgcgccg > 2:2928406/1‑91 (MQ=255)
gcCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTc > 2:6090088/1‑93 (MQ=255)
ccAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCa > 2:857612/1‑93 (MQ=255)
ccAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCa > 1:2651496/1‑93 (MQ=255)
cAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCAt > 1:832971/1‑93 (MQ=255)
cAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGACACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCAt > 1:1561232/1‑93 (MQ=255)
aaTCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATa < 2:2615793/93‑1 (MQ=255)
aTCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATaa > 1:3767243/1‑93 (MQ=255)
cGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTCTCATAAcc > 2:4421775/1‑93 (MQ=255)
cAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGAc > 1:5010699/1‑93 (MQ=255)
cAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGAc < 2:767723/93‑1 (MQ=255)
aGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACa > 1:2920611/1‑93 (MQ=255)
gATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACaa > 1:3444270/1‑93 (MQ=255)
gATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACaa > 2:1433368/1‑93 (MQ=255)
gATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACaa > 1:6190136/1‑93 (MQ=255)
atatTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAAc > 1:1252508/1‑93 (MQ=255)
atatTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAAc < 2:1403894/93‑1 (MQ=255)
tatTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAAcc < 2:4703991/93‑1 (MQ=255)
tttATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCa < 1:5915607/93‑1 (MQ=255)
tttATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTAGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCa < 1:4114735/93‑1 (MQ=255)
ttATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAg < 2:3152468/93‑1 (MQ=255)
ttATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAg < 1:5645130/93‑1 (MQ=255)
tATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAgc < 2:3318832/93‑1 (MQ=255)
tATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAgc > 2:4912136/1‑93 (MQ=255)
aTCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAgcc > 1:4835302/1‑93 (MQ=255)
gCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCa > 2:1766594/1‑93 (MQ=255)
ccAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCAt > 1:5299537/1‑93 (MQ=255)
cAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCAtt < 1:1769790/93‑1 (MQ=255)
aGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATtc > 1:1356242/1‑93 (MQ=255)
aGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATtc > 1:5868300/1‑93 (MQ=255)
aGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATtc > 2:5194446/1‑93 (MQ=255)
aGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCACCCGCCATtc > 1:1461052/1‑93 (MQ=255)
aGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTAGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATtc > 1:1001546/1‑93 (MQ=255)
gcgcGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATtct > 1:3559969/1‑93 (MQ=255)
gtcgtAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTc > 2:102068/1‑93 (MQ=255)
tcgtAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCa > 2:4604808/1‑93 (MQ=255)
tcgtAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCa > 2:4874245/1‑93 (MQ=255)
cgtAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCaa < 2:2489510/93‑1 (MQ=255)
cgtAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCaa < 2:4529952/93‑1 (MQ=255)
tAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATc > 2:2809607/1‑93 (MQ=255)
tAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATc < 2:2068/93‑1 (MQ=255)
cATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATcgcgc > 1:538971/1‑93 (MQ=255)
cATCGCCCGTTTCTGCCACGCATCGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATcgcgc < 2:2144782/93‑1 (MQ=255)
tCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCgcgcgc > 1:3153897/1‑93 (MQ=255)
cGCCCCTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGca < 2:3903766/93‑1 (MQ=255)
gCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGcac > 2:3260054/1‑93 (MQ=255)
cccGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGcacc > 2:1203435/1‑93 (MQ=255)
cccGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGcacc < 2:5579757/93‑1 (MQ=255)
ccGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGcacca > 1:4350689/1‑93 (MQ=255)
ccGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGcacca < 2:3713671/93‑1 (MQ=255)
ccGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGcacca > 1:1578600/1‑93 (MQ=255)
cGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCCGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGcaccac > 2:3947447/1‑93 (MQ=255)
cGTTTCTGCCACGCAGTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGcaccac < 1:4203935/93‑1 (MQ=255)
tttCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACtt > 1:2316867/1‑93 (MQ=255)
tttCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACtt < 2:301764/93‑1 (MQ=255)
ttCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACttt < 2:2731775/93‑1 (MQ=255)
ttCTGCAACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACttt < 2:5526131/93‑1 (MQ=255)
tCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACtttt > 2:3788848/1‑93 (MQ=255)
cTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACttttt < 2:2658186/93‑1 (MQ=255)
tGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTc < 1:1626968/93‑1 (MQ=255)
ccACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTctg < 2:2398744/93‑1 (MQ=255)
cACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGGCGCCCTTCTCTTCAATCGCGCGCACCACTTTTTctgc > 1:5344259/1‑93 (MQ=255)
aCGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTctgct > 2:4277340/1‑93 (MQ=255)
aCGCATTGCCCGGTCCCTTTCGCCCCGGCGCAGTTTTAATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTctgct < 2:1224387/93‑1 (MQ=255)
gCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCtgctgc > 2:5797639/1‑93 (MQ=255)
gCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCtgctgc > 2:3348965/1‑93 (MQ=255)
gCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCtgctgc > 2:5707519/1‑93 (MQ=255)
cATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTgcg > 1:3710563/1‑93 (MQ=255)
ttGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCCCCCCTTTTTCTGCTGcccc < 2:3548629/93‑1 (MQ=255)
gCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACACCCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGcgccgc < 2:5739521/93‑1 (MQ=255)
gCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGcgccgc < 2:1615737/93‑1 (MQ=255)
cTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCgccgcc > 2:4080811/1‑93 (MQ=255)
tCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCa < 1:3013787/93‑1 (MQ=255)
tCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCa > 2:2365948/1‑93 (MQ=255)
cGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCaa < 1:54352/93‑1 (MQ=255)
cGGTCGCTTCCCCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCaa < 2:47421/93‑1 (MQ=255)
ggTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAAt > 1:5154624/1‑93 (MQ=255)
ggTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAAt < 2:4639889/93‑1 (MQ=255)
gTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATc < 2:3086377/93‑1 (MQ=255)
gTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATc > 2:3435522/1‑93 (MQ=255)
gTCGCTTTCGCCCCGGCGCAGATTTCATAACCGACAACCCATCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATc > 1:6221964/1‑93 (MQ=255)
gTCGCTTTCCCCCCGGCGCAGTTTTCATACCCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATc < 1:5447311/93‑1 (MQ=255)
tCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCg > 1:2139202/1‑93 (MQ=255)
tCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCg < 1:4634349/93‑1 (MQ=255)
cGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCgg < 1:4499041/93‑1 (MQ=255)
gCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCggg > 2:1526014/1‑93 (MQ=255)
gCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCAAATCggc > 2:5655822/1‑92 (MQ=255)
tttCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCa > 2:1965813/1‑93 (MQ=255)
tCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGc < 1:1025682/93‑1 (MQ=255)
gCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCg > 2:5764180/1‑93 (MQ=255)
cccGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGGt > 2:3657378/1‑93 (MQ=255)
cccGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGGt < 2:5374701/93‑1 (MQ=255)
ccGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGGTg > 2:2544062/1‑93 (MQ=255)
ccGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGGTg < 1:4930839/93‑1 (MQ=255)
ccGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGGTg > 1:2193569/1‑93 (MQ=255)
cGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGGTGa > 1:1162329/1‑93 (MQ=255)
|
AGGAGCAGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGTGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGGTGA > NC_000913/4562510‑4562689
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACAGGAGCAGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGTGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGGTGATTAA > NC_000913/4562508‑4562693
|
ACAGGAGCAGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATTGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCG < SRR4302533.4462390/94‑1 (MQ=60)
AGGAGCAGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCA > SRR4302533.2317509/1‑94 (MQ=60)
AGCAGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTT < SRR4302533.5394048/94‑1 (MQ=60)
GCAGCCAATCGCTAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTT < SRR4302533.4133683/94‑1 (MQ=60)
CAGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTT < SRR4302533.5164798/94‑1 (MQ=60)
CAGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTT > SRR4302533.1409386/1‑94 (MQ=60)
AGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTC > SRR4302533.3761516/1‑94 (MQ=60)
GCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCA > SRR4302533.2667783/1‑94 (MQ=60)
CCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCAT > SRR4302533.296010/1‑94 (MQ=60)
CCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCAT < SRR4302533.455545/94‑1 (MQ=60)
CCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCAT > SRR4302533.837851/1‑94 (MQ=60)
CCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGACACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCAT > SRR4302533.1570633/1‑94 (MQ=60)
AATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAC > SRR4302533.1167848/1‑94 (MQ=60)
AATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAA > SRR4302533.4735727/1‑94 (MQ=60)
AATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAA > SRR4302533.3790340/1‑94 (MQ=60)
GCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGA < SRR4302533.4275896/94‑1 (MQ=60)
CCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGAC > SRR4302533.4183495/1‑94 (MQ=60)
CCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGAC > SRR4302533.5041055/1‑94 (MQ=60)
CAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACA > SRR4302533.2938503/1‑94 (MQ=60)
CAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGCTTTCATAACCGACA > SRR4302533.5708677/1‑94 (MQ=60)
AGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAA > SRR4302533.6227283/1‑94 (MQ=60)
AGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAA > SRR4302533.3465542/1‑94 (MQ=60)
GATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAAC < SRR4302533.5039357/94‑1 (MQ=60)
GATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAAC > SRR4302533.1259997/1‑94 (MQ=60)
TATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCC < SRR4302533.5414059/94‑1 (MQ=60)
ATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCA > SRR4302533.3579154/1‑94 (MQ=60)
ATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCA > SRR4302533.712149/1‑94 (MQ=60)
TTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGcccacccac > SRR4302533.4486323/1‑85 (MQ=60)
TTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAG > SRR4302533.1546230/1‑94 (MQ=60)
TTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAG < SRR4302533.610435/94‑1 (MQ=60)
TTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAG < SRR4302533.5951357/94‑1 (MQ=60)
TTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTAGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAG < SRR4302533.4139738/94‑1 (MQ=60)
TTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGC < SRR4302533.5679258/94‑1 (MQ=60)
TTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGC < SRR4302533.3862662/94‑1 (MQ=60)
TATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCC > SRR4302533.4864610/1‑94 (MQ=60)
ATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCG > SRR4302533.3242589/1‑94 (MQ=60)
TCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGC > SRR4302533.878116/1‑94 (MQ=60)
TCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCAACGCATTGCTCGGTCGCTTTCGCCCCCGCGCAGTTTTCATAACCGACAACCCAGCCGC > SRR4302533.1667251/1‑94 (MQ=60)
CGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCA < SRR4302533.5473485/94‑1 (MQ=60)
GCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCAT < SRR4302533.1047127/94‑1 (MQ=60)
GCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCAT > SRR4302533.5331284/1‑94 (MQ=60)
GCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCAT < SRR4302533.3662791/94‑1 (MQ=60)
CAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTC > SRR4302533.5903769/1‑94 (MQ=60)
CAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTC < SRR4302533.1780566/94‑1 (MQ=60)
CAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTC > SRR4302533.1364395/1‑94 (MQ=60)
CAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCACCCGCCATTC > SRR4302533.1469857/1‑94 (MQ=60)
CAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTAGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTC > SRR4302533.1007394/1‑94 (MQ=60)
AGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCT > SRR4302533.3581903/1‑94 (MQ=60)
AGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCT > SRR4302533.2961123/1‑94 (MQ=60)
CGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCT > SRR4302533.532582/1‑94 (MQ=60)
CGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCT < SRR4302533.5908792/94‑1 (MQ=60)
GCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTT > SRR4302533.4987299/1‑94 (MQ=60)
CGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTC < SRR4302533.4290985/94‑1 (MQ=60)
GTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCA > SRR4302533.1534450/1‑94 (MQ=60)
GTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCA > SRR4302533.6212612/1‑94 (MQ=60)
CGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAAT > SRR4302533.5472595/1‑94 (MQ=60)
AGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGC > SRR4302533.2548842/1‑94 (MQ=60)
GACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCG < SRR4302533.1621285/94‑1 (MQ=60)
ACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGC > SRR4302533.2408159/1‑94 (MQ=60)
ACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGC > SRR4302533.542176/1‑94 (MQ=60)
CATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCG < SRR4302533.5309964/94‑1 (MQ=60)
CATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCG > SRR4302533.5461327/1‑94 (MQ=60)
ATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGC > SRR4302533.3173286/1‑94 (MQ=60)
TCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCA > SRR4302533.2168925/1‑94 (MQ=60)
CGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCAC < SRR4302533.1851767/94‑1 (MQ=60)
CGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCAC < SRR4302533.5615557/94‑1 (MQ=60)
CCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCA > SRR4302533.1588107/1‑94 (MQ=60)
CCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCA > SRR4302533.4376943/1‑94 (MQ=60)
CGTTTCTGCCACGCAGTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACT < SRR4302533.4229366/94‑1 (MQ=60)
GTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTT > SRR4302533.2772611/1‑94 (MQ=60)
GTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTT > SRR4302533.2331210/1‑94 (MQ=60)
GTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTT > SRR4302533.190518/1‑94 (MQ=60)
CTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTC < SRR4302533.4924311/94‑1 (MQ=60)
TGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGTGCGCACCACTTTTTCT > SRR4302533.3954498/1‑94 (MQ=60)
TGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCT < SRR4302533.1636821/94‑1 (MQ=60)
GCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTG < SRR4302533.1245450/94‑1 (MQ=60)
CCGCGCATTGCTCGGTGGCTGTCGCCCGGGCGCAGTTTTCATAACCGACACCCCAGCCGCCATTCGCTTCAATCGCGCGCACCACTTTTTCTGC < SRR4302533.5375708/94‑1 (MQ=60)
CCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGGCGCCCTTCTCTTCAATCGCGCGCACCACTTTTTCTGC > SRR4302533.5376308/1‑94 (MQ=60)
CACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCT > SRR4302533.2258510/1‑94 (MQ=60)
CACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCT > SRR4302533.3128790/1‑94 (MQ=60)
CGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGC > SRR4302533.6291470/1‑94 (MQ=60)
GCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCG > SRR4302533.3733351/1‑94 (MQ=60)
GCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCG > SRR4302533.1307594/1‑94 (MQ=60)
TCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAA < SRR4302533.3032221/94‑1 (MQ=60)
CGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAAT > SRR4302533.5185753/1‑94 (MQ=60)
CGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAAT < SRR4302533.54719/94‑1 (MQ=60)
GGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATC > SRR4302533.1299839/1‑94 (MQ=60)
GGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATC > SRR4302533.1615419/1‑94 (MQ=60)
GGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATC > SRR4302533.1571453/1‑94 (MQ=60)
GGTCGCTTTCGCCCCGGCGCAGATTTCATAACCGACAACCCATCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATC > SRR4302533.6259256/1‑94 (MQ=60)
GTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCG > SRR4302533.2152388/1‑94 (MQ=60)
GTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCG < SRR4302533.3214481/94‑1 (MQ=60)
GTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCG < SRR4302533.1028179/94‑1 (MQ=60)
GTCGCTTTCCCCCCGGCGCAGTTTTCATACCCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCG < SRR4302533.5480127/94‑1 (MQ=60)
TCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGG < SRR4302533.4662430/94‑1 (MQ=60)
CGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGG < SRR4302533.4526286/94‑1 (MQ=60)
GCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGC < SRR4302533.232510/94‑1 (MQ=60)
GCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGC < SRR4302533.4444887/94‑1 (MQ=60)
CTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCA > SRR4302533.5835270/1‑94 (MQ=60)
CTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCA > SRR4302533.6234125/1‑94 (MQ=60)
TTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAG < SRR4302533.2235480/94‑1 (MQ=60)
TCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCC < SRR4302533.1031709/94‑1 (MQ=60)
GCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGG < SRR4302533.3724053/94‑1 (MQ=60)
CCCGGCGCATTTTTCATATCCACCAACCCAGCCGCCATTCTCTTCAATCGCGCGCCCCTCTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGGTG < SRR4302533.4074023/94‑1 (MQ=60)
CCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGGTG > SRR4302533.2207087/1‑94 (MQ=60)
CCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGGTG > SRR4302533.4758632/1‑94 (MQ=60)
CCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGGTGA < SRR4302533.4960699/94‑1 (MQ=60)
CCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGGTGA > SRR4302533.1169303/1‑94 (MQ=60)
GCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGGTGATTA > SRR4302533.1185774/1‑94 (MQ=60)
CGCAGTTTTCATAACCGACAACCCAACCGCCATTCTCTTCAATCGCACGCACCACGCTTTCTGCTGCGCCGCCAATCGGGGAGCCGGGGATTAA > SRR4302533.7851/1‑94 (MQ=60)
|
ACAGGAGCAGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGTGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGGTGATTAA > NC_000913/4562508‑4562693
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
