Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,592,876 |
A→G |
D146D (GAT→GAC) |
yjjM ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,592,876 | 0 | A | G | 100.0%
| 818.3
/ NA
| 252 | D146D (GAT→GAC) | yjjM | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (106/146); total (106/146) |
Only 100 of 263 total aligned reads displayed.
AAGTTGCGAGAACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGATCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAGGATTGATC > NC_000913/4592786‑4592965
|
aaGTTGCGAGAACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTc > 1:5858248/1‑93 (MQ=255)
aaGTTGCGAGAACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTc < 1:5806974/93‑1 (MQ=255)
aGTTGCGAGAACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCa < 1:3257168/93‑1 (MQ=255)
gTTGCGAGAACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCAt > 1:2811908/1‑93 (MQ=255)
ttGCGAGAACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATg > 2:4294321/1‑93 (MQ=255)
ttGCGAGAACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATg < 2:3623575/93‑1 (MQ=255)
cGAGAACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATc < 2:2076845/93‑1 (MQ=255)
agaACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGTATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATcag > 2:2319670/1‑93 (MQ=255)
agaACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATcag > 1:2216074/1‑93 (MQ=255)
agaACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATcag < 1:3176557/93‑1 (MQ=255)
aaCATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATcaggc < 2:4940412/93‑1 (MQ=255)
aaCATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATcaggc > 1:3678987/1‑93 (MQ=255)
aCATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATcaggca > 2:2864276/1‑93 (MQ=255)
aCATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATcaggca > 2:5571214/1‑93 (MQ=255)
aCATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATcaggca < 1:698550/93‑1 (MQ=255)
aTGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATcaggcagg > 1:1560048/1‑93 (MQ=255)
gCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGtt < 2:6198106/93‑1 (MQ=255)
gCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGtt < 2:3426494/93‑1 (MQ=255)
gCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGtt > 2:4717447/1‑93 (MQ=255)
gAAAGCTATTGCCGATGGTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTTGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTga > 2:4852980/1‑93 (MQ=255)
aaGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTgaga > 2:2946496/1‑93 (MQ=255)
aaGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTgaga < 2:3545417/93‑1 (MQ=255)
aaGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTgaga > 1:332296/1‑93 (MQ=255)
aGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGaa < 2:5067154/93‑1 (MQ=255)
cTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGTCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAg < 1:6145146/93‑1 (MQ=255)
cTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAg > 1:5124726/1‑93 (MQ=255)
tATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGt > 1:5731344/1‑93 (MQ=255)
tATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGt > 1:4130405/1‑93 (MQ=255)
tATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGt > 1:4705270/1‑93 (MQ=255)
aTTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTg > 1:3809764/1‑93 (MQ=255)
aTTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTg < 1:2572417/93‑1 (MQ=255)
ttGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGc > 1:1278579/1‑93 (MQ=255)
ttGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGc > 2:5701662/1‑93 (MQ=255)
tGCCGATGTTGTCACGCCGTACCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCt < 2:4565927/93‑1 (MQ=255)
tGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCt < 2:182293/93‑1 (MQ=255)
tGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCt > 1:3638928/1‑93 (MQ=255)
tGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCt < 1:2991/93‑1 (MQ=255)
aTGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGt > 2:738134/1‑93 (MQ=255)
aTGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGt > 1:1396301/1‑93 (MQ=255)
gttgtCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGa < 2:2224050/93‑1 (MQ=255)
tCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAAtgt < 2:5198488/93‑1 (MQ=255)
cACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAAtgtg < 1:1764252/93‑1 (MQ=255)
aCGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATgtgt > 1:3648260/1‑93 (MQ=255)
aCGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATgtgt < 2:2010677/93‑1 (MQ=255)
cGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGtt < 2:1385641/93‑1 (MQ=255)
gCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGttt < 2:2080097/93‑1 (MQ=255)
gCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGttt < 1:2076057/93‑1 (MQ=255)
gCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGttt > 1:5669964/1‑93 (MQ=255)
gCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGttt < 1:5472741/93‑1 (MQ=255)
gTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGa > 1:610111/1‑93 (MQ=255)
gTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGa > 2:2549184/1‑93 (MQ=255)
gTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGa > 2:3856069/1‑93 (MQ=255)
tAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGGAAGTGCTGCAGTGAATGTGTTTCGAg > 2:3413826/1‑93 (MQ=255)
gCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCa < 1:388171/93‑1 (MQ=255)
gATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCAttt > 1:5579023/1‑93 (MQ=255)
gATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCAttt < 2:5053644/93‑1 (MQ=255)
gATGACATTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCAttt < 2:3758404/93‑1 (MQ=255)
aTGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTc > 2:3997569/1‑93 (MQ=255)
tGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTcc > 2:4756432/1‑92 (MQ=255)
gACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTcgc > 2:4475449/1‑93 (MQ=255)
cGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGt > 2:655379/1‑93 (MQ=255)
gTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTa > 2:5295301/1‑93 (MQ=255)
ttCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAg < 2:4327158/93‑1 (MQ=255)
ttCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAg > 1:6006864/1‑93 (MQ=255)
tCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGc < 1:2612448/93‑1 (MQ=255)
cGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCt < 2:1029625/93‑1 (MQ=255)
gAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTc > 1:4998280/1‑93 (MQ=255)
aGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCa < 1:491312/93‑1 (MQ=255)
gCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCaa > 2:5340934/1‑93 (MQ=255)
cATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCaaa < 1:6109850/93‑1 (MQ=255)
aTGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCaaaa > 2:2344702/1‑92 (MQ=255)
gTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAgc > 1:4762268/1‑93 (MQ=255)
ttttCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAgct < 2:3193627/93‑1 (MQ=255)
ttttCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAgct < 1:4578737/93‑1 (MQ=255)
tttCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAgctg > 2:1206183/1‑93 (MQ=255)
ttCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAgctgc < 1:3964222/93‑1 (MQ=255)
ttCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAgctgc > 1:894235/1‑93 (MQ=255)
ttCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAgctgc < 1:2443865/93‑1 (MQ=255)
ttCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAgctgc < 1:1696130/93‑1 (MQ=255)
ttCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAgctgc < 1:105699/93‑1 (MQ=255)
gCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCg < 2:862055/93‑1 (MQ=255)
gCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCg > 1:4438918/1‑93 (MQ=255)
gCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCg < 1:4171507/93‑1 (MQ=255)
ccTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCgg > 2:3562060/1‑93 (MQ=255)
ccTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCgg < 1:1912850/93‑1 (MQ=255)
ccTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCgg > 2:1767639/1‑93 (MQ=255)
tGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCg > 1:4811963/1‑93 (MQ=255)
cagccagcGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTa < 1:5537845/93‑1 (MQ=255)
cagccagcGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTa < 1:3740957/93‑1 (MQ=255)
gccagcGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAgg > 2:2621979/1‑93 (MQ=255)
gccagcGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAgg < 1:2324714/93‑1 (MQ=255)
gccagcGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAgg < 1:400742/93‑1 (MQ=255)
cagcGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAGGAt < 2:270328/93‑1 (MQ=255)
cGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAGGATTGa < 2:4131649/93‑1 (MQ=255)
cGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAGGATTGa < 1:1222492/93‑1 (MQ=255)
cGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAGGATTGa < 2:4450266/93‑1 (MQ=255)
ggggGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAGGATTGAt < 1:3496652/93‑1 (MQ=255)
ggggGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAGGATTGAt > 2:4663602/1‑93 (MQ=255)
ggggGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAGGATTGAt < 1:1113693/93‑1 (MQ=255)
ggggTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAGGATTGATc > 1:422305/1‑93 (MQ=255)
|
AAGTTGCGAGAACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGATCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAGGATTGATC > NC_000913/4592786‑4592965
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCAAGTTGCGAGAACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGATCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAGGATTGATCGAAT > NC_000913/4592784‑4592969
|
TCAAGTTGCGAGAACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTCTTCGCCTGCAGCCAGCGGGGGT > SRR4302533.5174036/1‑94 (MQ=60)
CAAGTTGCGAGAACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTC > SRR4302533.5893663/1‑94 (MQ=60)
AAGTTGCGAGAACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCA < SRR4302533.5842039/94‑1 (MQ=60)
AGTTGCGAGAACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCAT > SRR4302533.2829214/1‑94 (MQ=60)
AGTTGCGAGAACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCAT < SRR4302533.3277255/94‑1 (MQ=60)
AGTTGCGAGAACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCAT < SRR4302533.6161935/94‑1 (MQ=60)
TGCGAGAACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGAT < SRR4302533.4825251/94‑1 (MQ=60)
GCGAGAACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATC < SRR4302533.5538584/94‑1 (MQ=60)
GCGAGAACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATC < SRR4302533.3672114/94‑1 (MQ=60)
CGAGAACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCA > SRR4302533.4113658/1‑94 (MQ=60)
CGAGAACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCA > SRR4302533.4052643/1‑94 (MQ=60)
GAGAACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAG > SRR4302533.5799902/1‑94 (MQ=60)
GAGAACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAG > SRR4302533.2229754/1‑94 (MQ=60)
GAGAACATGCGAAAGCTATTGCCGATGTTGACACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAG < SRR4302533.3692793/94‑1 (MQ=60)
AGAACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGG < SRR4302533.2999442/94‑1 (MQ=60)
AGAACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGG < SRR4302533.3196096/94‑1 (MQ=60)
AGAACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGG < SRR4302533.3630701/94‑1 (MQ=60)
GAACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGC > SRR4302533.3701601/1‑94 (MQ=60)
AACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCACGCA > SRR4302533.3883578/1‑94 (MQ=60)
ACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAG > SRR4302533.5103296/1‑94 (MQ=60)
ACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAG < SRR4302533.702682/94‑1 (MQ=60)
CATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGG < SRR4302533.1109522/94‑1 (MQ=60)
CATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGG > SRR4302533.1569444/1‑94 (MQ=60)
TGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTT < SRR4302533.2407123/94‑1 (MQ=60)
GCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGGGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTG > SRR4302533.3892070/1‑94 (MQ=60)
GCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTG < SRR4302533.4745385/94‑1 (MQ=60)
GCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTG < SRR4302533.1500303/94‑1 (MQ=60)
AAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGA < SRR4302533.4649839/94‑1 (MQ=60)
AAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGA > SRR4302533.334329/1‑94 (MQ=60)
AGGTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAA < SRR4302533.2439202/94‑1 (MQ=60)
GCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAG > SRR4302533.5155684/1‑94 (MQ=60)
GCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAG < SRR4302533.4009474/94‑1 (MQ=60)
GCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAG > SRR4302533.2743100/1‑94 (MQ=60)
CTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCGGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGG > SRR4302533.4155477/1‑94 (MQ=60)
CTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGTCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGT < SRR4302533.6182147/94‑1 (MQ=60)
CTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGT > SRR4302533.4733788/1‑94 (MQ=60)
CTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGT > SRR4302533.5765947/1‑94 (MQ=60)
CTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGT > SRR4302533.4155476/1‑94 (MQ=60)
CTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGT > SRR4302533.3767091/1‑94 (MQ=60)
CTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGT > SRR4302533.325345/1‑94 (MQ=60)
TATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTG < SRR4302533.5708988/94‑1 (MQ=60)
TATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTG > SRR4302533.5188119/1‑94 (MQ=60)
TATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTG > SRR4302533.3833068/1‑94 (MQ=60)
ATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGC < SRR4302533.2588244/94‑1 (MQ=60)
ATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGC > SRR4302533.1286264/1‑94 (MQ=60)
TTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCT < SRR4302533.1260903/94‑1 (MQ=60)
TTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCT > SRR4302533.3661303/1‑94 (MQ=60)
TTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCT < SRR4302533.4273288/94‑1 (MQ=60)
TGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTG < SRR4302533.5276243/94‑1 (MQ=60)
TGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTG < SRR4302533.3015/94‑1 (MQ=60)
GCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGA < SRR4302533.2927246/94‑1 (MQ=60)
GCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGA > SRR4302533.5976967/1‑94 (MQ=60)
GCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGA < SRR4302533.42282/94‑1 (MQ=60)
GATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGT > SRR4302533.3263417/1‑94 (MQ=60)
GATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGT > SRR4302533.1404716/1‑94 (MQ=60)
GATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCACCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGT > SRR4302533.4467269/1‑94 (MQ=60)
ATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTG > SRR4302533.1377119/1‑94 (MQ=60)
TGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGA > SRR4302533.4996359/1‑94 (MQ=60)
TGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGA < SRR4302533.1768507/94‑1 (MQ=60)
TTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAAT < SRR4302533.1372198/94‑1 (MQ=60)
TGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATG < SRR4302533.6214974/94‑1 (MQ=60)
TGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATG > SRR4302533.2319011/1‑94 (MQ=60)
GTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGGAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGT < SRR4302533.5953157/94‑1 (MQ=60)
GTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGT > SRR4302533.6108165/1‑94 (MQ=60)
CACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGT > SRR4302533.3670693/1‑94 (MQ=60)
CACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGT < SRR4302533.1774995/94‑1 (MQ=60)
ACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTT < SRR4302533.5815764/94‑1 (MQ=60)
ACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTT < SRR4302533.3436092/94‑1 (MQ=60)
CGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTT > SRR4302533.5704211/1‑94 (MQ=60)
CGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTT < SRR4302533.6148271/94‑1 (MQ=60)
GCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTC > SRR4302533.1222698/1‑94 (MQ=60)
GCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTC < SRR4302533.5505722/94‑1 (MQ=60)
GCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTC < SRR4302533.2088834/94‑1 (MQ=60)
GCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTC > SRR4302533.565851/1‑94 (MQ=60)
CAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCG < SRR4302533.2114554/94‑1 (MQ=60)
CAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCG < SRR4302533.781080/94‑1 (MQ=60)
AGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGA > SRR4302533.613699/1‑94 (MQ=60)
AGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGA > SRR4302533.2705879/1‑94 (MQ=60)
GTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAG < SRR4302533.5612284/94‑1 (MQ=60)
AGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCA < SRR4302533.4427557/94‑1 (MQ=60)
GCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCAT < SRR4302533.390512/94‑1 (MQ=60)
GCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCAT < SRR4302533.3670591/94‑1 (MQ=60)
GCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCAT < SRR4302533.4891888/94‑1 (MQ=60)
CGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTT > SRR4302533.5612740/1‑94 (MQ=60)
GATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGACCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTC > SRR4302533.4738339/1‑94 (MQ=60)
ATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCG > SRR4302533.6278795/1‑94 (MQ=60)
GACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCG > SRR4302533.2478248/1‑94 (MQ=60)
GTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAG < SRR4302533.99700/94‑1 (MQ=60)
GTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAG > SRR4302533.6043257/1‑94 (MQ=60)
GTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAG < SRR4302533.3724935/94‑1 (MQ=60)
TCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCT < SRR4302533.2628482/94‑1 (MQ=60)
TCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCT > SRR4302533.3029373/1‑94 (MQ=60)
CGAGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTC > SRR4302533.5028582/1‑94 (MQ=60)
AGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAA < SRR4302533.5579082/94‑1 (MQ=60)
AGCATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAA < SRR4302533.494248/94‑1 (MQ=60)
CATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAAC < SRR4302533.6146733/94‑1 (MQ=60)
ATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACA < SRR4302533.3373172/94‑1 (MQ=60)
ATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACA < SRR4302533.4848236/94‑1 (MQ=60)
ATGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACA > SRR4302533.5890967/1‑94 (MQ=60)
TGGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAG < SRR4302533.6145880/94‑1 (MQ=60)
GGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGC > SRR4302533.4791153/1‑94 (MQ=60)
GGTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGC > SRR4302533.5139/1‑94 (MQ=60)
GTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCT < SRR4302533.1937467/94‑1 (MQ=60)
GTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCT < SRR4302533.4655686/94‑1 (MQ=60)
GTTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCT < SRR4302533.5630252/94‑1 (MQ=60)
TTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTG < SRR4302533.6130282/94‑1 (MQ=60)
TTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTG < SRR4302533.3722988/94‑1 (MQ=60)
TTTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTG < SRR4302533.4606488/94‑1 (MQ=60)
TTTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGC > SRR4302533.899490/1‑94 (MQ=60)
TTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCT < SRR4302533.2458949/94‑1 (MQ=60)
TTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCT < SRR4302533.106358/94‑1 (MQ=60)
TTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCT < SRR4302533.3988371/94‑1 (MQ=60)
TTCGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCT < SRR4302533.1706402/94‑1 (MQ=60)
CGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCG > SRR4302533.4465749/1‑94 (MQ=60)
CGCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCG < SRR4302533.3613695/94‑1 (MQ=60)
GCCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGG < SRR4302533.4196786/94‑1 (MQ=60)
CCTGCAGCCGGCGGGGGTCATGGTCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACATCTGCTCGGC < SRR4302533.4199746/94‑1 (MQ=60)
CCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGC < SRR4302533.1125464/94‑1 (MQ=60)
CCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGC > SRR4302533.1663439/1‑94 (MQ=60)
CCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGC > SRR4302533.1762576/1‑94 (MQ=60)
CCTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGC < SRR4302533.1924523/94‑1 (MQ=60)
CTGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCG > SRR4302533.4841128/1‑94 (MQ=60)
TGCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGT > SRR4302533.1460402/1‑94 (MQ=60)
GCAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTA > SRR4302533.1847560/1‑94 (MQ=60)
CAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAG < SRR4302533.3763899/94‑1 (MQ=60)
CAGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAG < SRR4302533.5571288/94‑1 (MQ=60)
AGCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAGG < SRR4302533.1787835/94‑1 (MQ=60)
GCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAGGA < SRR4302533.403160/94‑1 (MQ=60)
GCCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAGGA < SRR4302533.2339105/94‑1 (MQ=60)
CCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAGGAT < SRR4302533.2583882/94‑1 (MQ=60)
CCAGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAGGAT < SRR4302533.2182841/94‑1 (MQ=60)
AGCGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAGGATTG < SRR4302533.2594135/94‑1 (MQ=60)
CGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAGGATTGAT < SRR4302533.1229823/94‑1 (MQ=60)
CGGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAGGATTGAT < SRR4302533.395345/94‑1 (MQ=60)
GGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAGGATTGATC > SRR4302533.424832/1‑94 (MQ=60)
GGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAGGATTGATC < SRR4302533.1120297/94‑1 (MQ=60)
GGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAGGATTGATC < SRR4302533.3324095/94‑1 (MQ=60)
GGGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAGGATTGATC < SRR4302533.3518214/94‑1 (MQ=60)
GGGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAGGATTGATCG > SRR4302533.6006104/1‑94 (MQ=60)
GGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCTTAGCTCAAACAGCTGCTCGGCGTAGGATTGATCGA < SRR4302533.5974573/94‑1 (MQ=60)
GGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAGGATTGATCGA > SRR4302533.4562694/1‑94 (MQ=60)
GGGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAGGATTGATCGA < SRR4302533.4194257/94‑1 (MQ=60)
GGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAGGATTGATCGAA > SRR4302533.1624941/1‑94 (MQ=60)
GGTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAGGATTGATCGAA > SRR4302533.6325681/1‑94 (MQ=60)
GTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAGGATTGATCGAAT > SRR4302533.1764070/1‑94 (MQ=60)
GTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAGGATTGATCGAAT > SRR4302533.3048222/1‑94 (MQ=60)
GTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAGGATTGATCGAAT < SRR4302533.5262708/94‑1 (MQ=60)
GTCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAGGATTGATCGAAT > SRR4302533.5227671/1‑94 (MQ=60)
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TCAAGTTGCGAGAACATGCGAAAGCTATTGCCGATGTTGTCACGCAGTAGCCGATGACGTTCGAGCATGGTTTTCGCCTGCAGCCAGCGGGGATCATGATCAGGCAGGTTGAGAAAGTGCTGAAGTGAATGTGTTTCGAGCATTTCGCGTAGCTCAAACAGCTGCTCGGCGTAGGATTGATCGAAT > NC_000913/4592784‑4592969
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
