Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,626,106 |
A→G |
E408G (GAG→GGG) |
nadR → |
NadR |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,626,106 | 0 | A | G | 100.0%
| 739.2
/ NA
| 230 | E408G (GAG→GGG) | nadR | NadR |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (94/136); total (94/136) |
Only 100 of 237 total aligned reads displayed.
AGAACAATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTC > NC_000913/4626016‑4626194
|
agaACAATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGc > 1:2437457/1‑93 (MQ=255)
agaACAATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGc > 1:2186473/1‑93 (MQ=255)
gaACAATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCa < 2:5815564/93‑1 (MQ=255)
aaCAATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCag > 2:3485832/1‑93 (MQ=255)
aCAATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCaga < 1:4333946/93‑1 (MQ=255)
aCAATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCaga < 2:4383609/93‑1 (MQ=255)
tatCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATa < 1:544198/93‑1 (MQ=255)
tCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAAc > 1:1443418/1‑93 (MQ=255)
tCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAAc > 1:4834852/1‑93 (MQ=255)
tCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAAc > 1:4951902/1‑93 (MQ=255)
tCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGATGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAAc > 1:3612519/1‑93 (MQ=255)
gAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCg > 2:5654552/1‑93 (MQ=255)
aaTTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGt < 2:3844059/93‑1 (MQ=255)
aaTTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGt < 1:6063726/93‑1 (MQ=255)
tttGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGtga < 1:1327598/93‑1 (MQ=255)
tttGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGtga < 1:2640587/93‑1 (MQ=255)
ttGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGtgat < 2:1372527/93‑1 (MQ=255)
ttGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGtgat > 2:758717/1‑93 (MQ=255)
gCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGaaa < 2:5561450/93‑1 (MQ=255)
gCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGaaa < 2:2504329/93‑1 (MQ=255)
gCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGaaa < 1:4574841/93‑1 (MQ=255)
cGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAAc < 1:2641705/93‑1 (MQ=255)
cGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAAc < 2:1165057/93‑1 (MQ=255)
ttGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCt > 1:1815947/1‑93 (MQ=255)
tGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTc < 2:1650608/93‑1 (MQ=255)
aaGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCaa > 1:962726/1‑93 (MQ=255)
agagGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCaaa < 1:631145/93‑1 (MQ=255)
agagGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCaaa < 2:3885612/93‑1 (MQ=255)
agagGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCaaa < 2:4136503/93‑1 (MQ=255)
agagGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCaaa > 1:3066334/1‑93 (MQ=255)
agagGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCaaa < 2:5387204/93‑1 (MQ=255)
agagGAAGAATACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCaaa < 1:439685/93‑1 (MQ=255)
gagGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAg < 2:2037863/93‑1 (MQ=255)
gagGAA‑ATTACGACAGGCGTTTCCTGGGGTGCGTGGAAATGGGGCGGGAGGTGATTGGGGGGGAGAGATAACCGTGATGAAAATGCTCCAAgg > 2:374207/1‑93 (MQ=255)
aagGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGACCTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAg < 1:424514/92‑1 (MQ=255)
agGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGTGGCAGAGATAACCGTGATGAAACTGCTCAAAgg < 1:4279432/93‑1 (MQ=255)
agGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAgg < 2:3342527/93‑1 (MQ=255)
ggAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGc > 2:3380968/1‑93 (MQ=255)
ggAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGc < 1:2954430/93‑1 (MQ=255)
gAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCg < 2:5945558/93‑1 (MQ=255)
gAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCg > 1:5575830/1‑93 (MQ=255)
aaGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGa < 1:2481052/93‑1 (MQ=255)
aaGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGa < 2:3737615/93‑1 (MQ=255)
gATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAgg < 2:6015989/93‑1 (MQ=255)
gATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAgg > 2:429332/1‑93 (MQ=255)
aTTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGt > 2:2234244/1‑93 (MQ=255)
ttACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGta > 2:5835884/1‑93 (MQ=255)
ttACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGta < 1:4066699/93‑1 (MQ=255)
atACGAGAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGta < 1:2116770/92‑1 (MQ=255)
tACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGtat < 2:5738340/93‑1 (MQ=255)
tACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGtat < 2:2161406/93‑1 (MQ=255)
aCGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGtata < 1:125912/93‑1 (MQ=255)
cGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATaa < 1:1165310/93‑1 (MQ=255)
cAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAAt > 2:1897466/1‑93 (MQ=255)
aGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATg < 2:4049786/93‑1 (MQ=255)
aGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATg < 2:2818987/93‑1 (MQ=255)
aGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGGATAAAATg > 1:5109623/1‑93 (MQ=255)
gTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGa < 2:1208612/93‑1 (MQ=255)
gTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGa > 2:1546959/1‑93 (MQ=255)
gTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGa < 1:3897987/93‑1 (MQ=255)
gTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGtt < 1:3410506/93‑1 (MQ=255)
tttCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGttt < 2:2854007/93‑1 (MQ=255)
tttCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGttt > 2:2789419/1‑93 (MQ=255)
tttCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGttt > 1:4694439/1‑93 (MQ=255)
tttCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGttt > 2:1514604/1‑93 (MQ=255)
tttCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGttt > 1:3272484/1‑93 (MQ=255)
tCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGttttt > 2:3069352/1‑93 (MQ=255)
ccTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGtttttt > 1:1059116/1‑93 (MQ=255)
ctgcgctgcgTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCCAAGGCGAGGTATAAAATGAGttttttt > 1:5409404/1‑93 (MQ=255)
ctgcgctgcgTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGttttttt < 2:1083164/93‑1 (MQ=255)
ctgcgctgcgTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGttttttt < 1:5949076/93‑1 (MQ=255)
ctgcgctgcgTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGttttttt > 2:5194068/1‑93 (MQ=255)
cgctgcgTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTtgat > 1:1931380/1‑93 (MQ=255)
cgctgcgTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTtgat < 1:4103375/93‑1 (MQ=255)
gctgcgTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTtgatg < 1:1006880/93‑1 (MQ=255)
ctgcgTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAGCCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTtgatga < 1:2059659/93‑1 (MQ=255)
tgcgTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAg > 2:4098785/1‑93 (MQ=255)
cgTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTACAAAATGAGTTTTTTTGATGAGtt < 2:5073675/93‑1 (MQ=255)
gTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTg > 1:4499165/1‑93 (MQ=255)
tGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGa > 1:672202/1‑93 (MQ=255)
gAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGaaa < 2:809066/93‑1 (MQ=255)
gAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGaaa < 1:3355686/93‑1 (MQ=255)
aaCTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGaaaa < 2:4638317/93‑1 (MQ=255)
aaCTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGaaaa < 1:2792808/93‑1 (MQ=255)
aaCTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGaaaa < 2:4164338/93‑1 (MQ=255)
aCTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAAc < 2:500001/93‑1 (MQ=255)
aCTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAAc > 2:6208812/1‑93 (MQ=255)
tGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACct < 1:3764973/93‑1 (MQ=255)
ggTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACctc < 1:5182916/93‑1 (MQ=255)
gCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACctctct < 2:1587749/93‑1 (MQ=255)
gggAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTgg > 1:1139320/1‑93 (MQ=255)
gggAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTgg < 2:3141650/93‑1 (MQ=255)
ggAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGa > 2:4752424/1‑93 (MQ=255)
gagaTGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGaa < 1:1587822/93‑1 (MQ=255)
agaTGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAag < 2:2186473/93‑1 (MQ=255)
atgatgGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAagag < 1:246021/93‑1 (MQ=255)
tgatgGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAgg > 2:4011737/1‑93 (MQ=255)
atgGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCt < 2:2467927/93‑1 (MQ=255)
tgGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTg > 2:1734002/1‑93 (MQ=255)
ggggggGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGt < 1:2324265/93‑1 (MQ=255)
|
AGAACAATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTC > NC_000913/4626016‑4626194
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAGAGAACAATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAG > NC_000913/4626013‑4626197
|
AAGAGAACAATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGG > SRR4302533.4318880/1‑94 (MQ=60)
AAGAGAACAATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGG > SRR4302533.375446/1‑94 (MQ=60)
AAGAGAACAATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGG < SRR4302533.1454364/94‑1 (MQ=60)
AGAGAACAATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGG < SRR4302533.3626771/94‑1 (MQ=60)
AGAGAACAATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGG < SRR4302533.5404412/94‑1 (MQ=60)
GAGAACAATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGC > SRR4302533.2199948/1‑94 (MQ=60)
GAGAACAATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGC < SRR4302533.4634935/94‑1 (MQ=60)
GAGAACAATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGC > SRR4302533.2452504/1‑94 (MQ=60)
AACAATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGCGCGGGAGATGATGGGGGGGCAGA > SRR4302533.2375502/1‑94 (MQ=60)
ACAATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAG < SRR4302533.4360059/94‑1 (MQ=60)
AATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGAT > SRR4302533.4443344/1‑94 (MQ=60)
TATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAA < SRR4302533.547430/94‑1 (MQ=60)
TATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAA < SRR4302533.2115800/94‑1 (MQ=60)
TATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAA > SRR4302533.6073240/1‑94 (MQ=60)
ATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAAC > SRR4302533.4981891/1‑94 (MQ=60)
ATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAAC > SRR4302533.4864155/1‑94 (MQ=60)
ATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAAC > SRR4302533.1452124/1‑94 (MQ=60)
ATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGATGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAAC > SRR4302533.3634752/1‑94 (MQ=60)
CGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCG > SRR4302533.4080633/1‑94 (MQ=60)
CGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCG < SRR4302533.2481703/94‑1 (MQ=60)
AATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCGGAGATAACCGCG > SRR4302533.3318374/1‑94 (MQ=60)
AATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTG < SRR4302533.6100433/94‑1 (MQ=60)
AATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTG > SRR4302533.1538126/1‑94 (MQ=60)
ATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGA > SRR4302533.2512367/1‑94 (MQ=60)
ATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGA < SRR4302533.4365921/94‑1 (MQ=60)
ATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGA < SRR4302533.1904342/94‑1 (MQ=60)
TTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGAT < SRR4302533.2656816/94‑1 (MQ=60)
TTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGAT < SRR4302533.1335566/94‑1 (MQ=60)
GTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAA < SRR4302533.2767347/94‑1 (MQ=60)
GTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAA < SRR4302533.3532289/94‑1 (MQ=60)
TGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAA > SRR4302533.2657882/1‑94 (MQ=60)
GCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAAC < SRR4302533.4602566/94‑1 (MQ=60)
GCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAAC > SRR4302533.4258889/1‑94 (MQ=60)
CGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACT < SRR4302533.1119656/94‑1 (MQ=60)
CGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACT < SRR4302533.2877990/94‑1 (MQ=60)
CGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACT < SRR4302533.2657936/94‑1 (MQ=60)
GGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTG < SRR4302533.229235/94‑1 (MQ=60)
GTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCT < SRR4302533.4914976/94‑1 (MQ=60)
GTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCT > SRR4302533.1827033/1‑94 (MQ=60)
TTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTC > SRR4302533.3433863/1‑94 (MQ=60)
TTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTC < SRR4302533.5832383/94‑1 (MQ=60)
TTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTC < SRR4302533.1421734/94‑1 (MQ=60)
TGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCA < SRR4302533.4293846/94‑1 (MQ=60)
GAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAA > SRR4302533.968383/1‑94 (MQ=60)
AAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGTTCAAA < SRR4302533.1158596/94‑1 (MQ=60)
AAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAA > SRR4302533.3085169/1‑94 (MQ=60)
AGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAG < SRR4302533.634858/94‑1 (MQ=60)
AGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAG < SRR4302533.3774194/94‑1 (MQ=60)
AGAGGAAGAATACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAG < SRR4302533.442309/94‑1 (MQ=60)
AAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGACCTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGG < SRR4302533.427050/94‑1 (MQ=60)
AGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGTGGCAGAGATAACCGTGATGAAACTGCTCAAAGGC < SRR4302533.4305165/94‑1 (MQ=60)
AGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGC < SRR4302533.5215780/94‑1 (MQ=60)
GGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCG < SRR4302533.2972498/94‑1 (MQ=60)
GGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCG > SRR4302533.5609527/1‑94 (MQ=60)
GAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCTGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGA < SRR4302533.4124032/94‑1 (MQ=60)
AAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAG < SRR4302533.2496353/94‑1 (MQ=60)
AAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAG < SRR4302533.1205614/94‑1 (MQ=60)
AAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAG < SRR4302533.5706972/94‑1 (MQ=60)
AGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGG < SRR4302533.5212897/94‑1 (MQ=60)
GATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGT > SRR4302533.5434970/1‑94 (MQ=60)
ATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTTAAAGGCGAGGTA < SRR4302533.2520091/94‑1 (MQ=60)
ATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTA > SRR4302533.439551/1‑94 (MQ=60)
ATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTA < SRR4302533.5466642/94‑1 (MQ=60)
ATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTA < SRR4302533.3964778/94‑1 (MQ=60)
TTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTAT < SRR4302533.4091454/94‑1 (MQ=60)
ATACGAGAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTAT < SRR4302533.2129826/94‑1 (MQ=60)
ACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAA < SRR4302533.126699/94‑1 (MQ=60)
CGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAA > SRR4302533.2099170/1‑94 (MQ=60)
CGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAA < SRR4302533.1172298/94‑1 (MQ=60)
CAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATG < SRR4302533.1154271/94‑1 (MQ=60)
CAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATG > SRR4302533.303323/1‑94 (MQ=60)
CAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGGATAAAATG > SRR4302533.5140502/1‑94 (MQ=60)
AGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGA > SRR4302533.662038/1‑94 (MQ=60)
AGTCGTGTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGA < SRR4302533.1926454/94‑1 (MQ=60)
GTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAG < SRR4302533.3921770/94‑1 (MQ=60)
GTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAG < SRR4302533.4325834/94‑1 (MQ=60)
TCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGT > SRR4302533.3417003/1‑94 (MQ=60)
GTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTT > SRR4302533.4722884/1‑94 (MQ=60)
GTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTT < SRR4302533.3431570/94‑1 (MQ=60)
GTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTT > SRR4302533.3292680/1‑94 (MQ=60)
TTTCCTGCTCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTT < SRR4302533.1000339/94‑1 (MQ=60)
TTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTT > SRR4302533.1764090/1‑94 (MQ=60)
TTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCAAGGTATAAAATGAGTTTT < SRR4302533.4554341/94‑1 (MQ=60)
TTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTT > SRR4302533.2069592/1‑94 (MQ=60)
TTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTT < SRR4302533.214907/94‑1 (MQ=60)
TCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTT > SRR4302533.1065343/1‑94 (MQ=60)
TCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTT < SRR4302533.4639877/94‑1 (MQ=60)
CCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCCAAGGCGAGGTATAAAATGAGTTTTTTT > SRR4302533.5441918/1‑94 (MQ=60)
CTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTG < SRR4302533.5985055/94‑1 (MQ=60)
GCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGAT > SRR4302533.1943160/1‑94 (MQ=60)
GCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGAT > SRR4302533.4888839/1‑94 (MQ=60)
CGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATG > SRR4302533.6163374/1‑94 (MQ=60)
CGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATG < SRR4302533.4128337/94‑1 (MQ=60)
GCTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGA < SRR4302533.1012771/94‑1 (MQ=60)
CTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAGCCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAG < SRR4302533.2072358/94‑1 (MQ=60)
CTGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAG > SRR4302533.909551/1‑94 (MQ=60)
TGCGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGT < SRR4302533.2693231/94‑1 (MQ=60)
CGTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTG > SRR4302533.4526411/1‑94 (MQ=60)
GTGGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGA > SRR4302533.676170/1‑94 (MQ=60)
GGAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAA > SRR4302533.4200463/1‑94 (MQ=60)
GAACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAA < SRR4302533.3376421/94‑1 (MQ=60)
AACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAAC < SRR4302533.2809988/94‑1 (MQ=60)
AACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAAC < SRR4302533.3086744/94‑1 (MQ=60)
AACTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAAC > SRR4302533.1303048/1‑94 (MQ=60)
TGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTC < SRR4302533.3788050/94‑1 (MQ=60)
TGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTC < SRR4302533.1399044/94‑1 (MQ=60)
GGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCT < SRR4302533.5214209/94‑1 (MQ=60)
GTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTC > SRR4302533.4690207/1‑94 (MQ=60)
TGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCT < SRR4302533.5516012/94‑1 (MQ=60)
GCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTG < SRR4302533.4836273/94‑1 (MQ=60)
GCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTG < SRR4302533.1018981/94‑1 (MQ=60)
CGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGG > SRR4302533.1146099/1‑94 (MQ=60)
GGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAA > SRR4302533.3876454/1‑94 (MQ=60)
GAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAG < SRR4302533.1597407/94‑1 (MQ=60)
AGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGA < SRR4302533.6329953/94‑1 (MQ=60)
ATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGG > SRR4302533.2457187/1‑94 (MQ=60)
ATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGG < SRR4302533.3099297/94‑1 (MQ=60)
ATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGG < SRR4302533.247544/94‑1 (MQ=60)
ATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTG < SRR4302533.2341721/94‑1 (MQ=60)
ATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTG < SRR4302533.5138048/94‑1 (MQ=60)
GGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTC < SRR4302533.2338653/94‑1 (MQ=60)
GGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGA > SRR4302533.1991539/1‑94 (MQ=60)
GGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAG < SRR4302533.3037206/94‑1 (MQ=60)
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AAGAGAACAATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAG > NC_000913/4626013‑4626197
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
