Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCAGGCGGCGATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CTG‑‑CTCGCAGGT‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT > NC_000913/3957456‑3957627
|
TCAGGCGGCGATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGTTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGG < SRR4302533.4098703/94‑1 (MQ=60)
TCAGGCGGCGATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATCTATGGCAAAAGCCCGGAAAATC‑‑‑‑CGG < SRR4302533.4865796/94‑1 (MQ=60)
TCAGGCGGCGATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGG < SRR4302533.3668076/94‑1 (MQ=60)
TCAGGCGGCGATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGG < SRR4302533.4293906/94‑1 (MQ=60)
GGCGGCGATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑Cgggct < SRR4302533.4000919/94‑6 (MQ=60)
GCGGCGATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑Cgggctt < SRR4302533.1101113/94‑7 (MQ=60)
CGGCGATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑Cgggcttc < SRR4302533.2119345/94‑8 (MQ=60)
CGGCGATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑Cgggcttc > SRR4302533.5252947/1‑87 (MQ=60)
GGCGATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATCTGGGAAAAGCCCGGGAAATC‑‑‑‑Cggggttcg > SRR4302533.1465880/1‑86 (MQ=60)
GGCGATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑Cgggcttcg < SRR4302533.2557162/94‑9 (MQ=60)
GGCGATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAACCCGGAAAATC‑‑‑‑Cgggcctcg > SRR4302533.4395779/1‑86 (MQ=60)
GATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑Cgggcttcgcag > SRR4302533.3362649/1‑83 (MQ=60)
GATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGACCGGAAAATC‑‑‑‑Cgggcttcgcag > SRR4302533.812267/1‑83 (MQ=60)
GATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATTTATCGCAAAAGGCCGGAAAATC‑‑‑‑Cggggctcgaag > SRR4302533.2944001/1‑83 (MQ=60)
ATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑Cgggcttcgcagg > SRR4302533.3284055/1‑82 (MQ=60)
ATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑Cgggcttcgcagg < SRR4302533.2542080/94‑13 (MQ=60)
ATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑Cgggcttcgcagg < SRR4302533.2548993/94‑13 (MQ=60)
TTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑Cgggcttcgcaggt > SRR4302533.2984323/1‑81 (MQ=60)
TTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑Cgggcttcgcaggt < SRR4302533.2057225/94‑14 (MQ=60)
TTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAACCCGGAAAATC‑‑‑‑Cgggcttcgcaggt > SRR4302533.3593202/1‑81 (MQ=60)
ATTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑Cgggcttcgcaggt < SRR4302533.2112968/94‑14 (MQ=60)
TTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑Cgggcttcgcaggtcc < SRR4302533.2895393/94‑16 (MQ=60)
TTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑Cgggcttcgcaggtcc < SRR4302533.4279778/94‑16 (MQ=60)
TAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑Cgggcttcgcaggtccc > SRR4302533.3476898/1‑78 (MQ=60)
GCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑Cgggcttcgcaggtccctc < SRR4302533.1996934/94‑19 (MQ=60)
GCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑Cgggcttcgcaggtccctc < SRR4302533.5372303/94‑19 (MQ=60)
CATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑Cgggcttcgcaggtccctca > SRR4302533.1311128/1‑75 (MQ=60)
ATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑Cgggcttcgcaggtccctcaa > SRR4302533.6196470/1‑74 (MQ=60)
ATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑Cgggcttcgcaggtccctcaa > SRR4302533.1685624/1‑74 (MQ=60)
TAATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGTTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑Cgggcttcgcaggtccctcaag < SRR4302533.1029137/94‑22 (MQ=60)
GATCCGCAGATGCTAACGTAATTGTCAGTCAGGGGGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑Cgggcttcgcaggtccctcaagg < SRR4302533.360993/94‑23 (MQ=60)
GATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑Cgggcttcgcaggtccctcaagg < SRR4302533.2424408/94‑23 (MQ=60)
GATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑Cgggcttcgcaggtccctcaagg < SRR4302533.1749609/94‑23 (MQ=60)
ATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑Cgggcttcgcaggtccctcaaggg < SRR4302533.784116/94‑24 (MQ=60)
ATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑Cgggcttcgcaggtccctcaaggg < SRR4302533.4817628/94‑24 (MQ=60)
TCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGG < SRR4302533.5007857/94‑1 (MQ=60)
CGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAG < SRR4302533.3270915/94‑1 (MQ=60)
CAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAA < SRR4302533.321457/94‑1 (MQ=60)
AGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATTGCAAAAGCCCGGAAAATA‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAA > SRR4302533.645954/1‑94 (MQ=60)
AGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAA > SRR4302533.2765271/1‑94 (MQ=60)
AGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAA > SRR4302533.3583993/1‑94 (MQ=60)
AGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCACGGACAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAA > SRR4302533.3120191/1‑94 (MQ=60)
AGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑Cgggcttcgcaggtccccccaggggaggaa > SRR4302533.3738971/1‑65 (MQ=60)
GATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAA > SRR4302533.3487808/1‑94 (MQ=60)
GATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAA > SRR4302533.4911113/1‑94 (MQ=60)
GATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAA > SRR4302533.5437849/1‑94 (MQ=60)
TGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACT < SRR4302533.1922281/94‑1 (MQ=60)
TGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACT < SRR4302533.76149/94‑1 (MQ=60)
TGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACT > SRR4302533.739827/1‑94 (MQ=60)
GCTANCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTT < SRR4302533.2110872/94‑1 (MQ=60)
CTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTA > SRR4302533.4542290/1‑94 (MQ=60)
TAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATTTGGCAAAAACCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTGCCTCAAGGGGAGAAAACTTAG > SRR4302533.2611431/1‑94 (MQ=60)
TAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCCAGGGGAGAAAACTTAG > SRR4302533.58365/1‑94 (MQ=60)
AACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGG < SRR4302533.1247558/94‑1 (MQ=60)
ACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGG < SRR4302533.738655/94‑1 (MQ=60)
ACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGG > SRR4302533.6201165/1‑94 (MQ=60)
ACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGG < SRR4302533.1186244/94‑1 (MQ=60)
GTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCC > SRR4302533.1608584/1‑94 (MQ=60)
ATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCT < SRR4302533.3880509/94‑1 (MQ=60)
TGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTAT < SRR4302533.158760/94‑1 (MQ=60)
TGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTAT < SRR4302533.6074810/94‑1 (MQ=60)
CAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGG < SRR4302533.754541/94‑1 (MQ=60)
CAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGG < SRR4302533.145383/94‑1 (MQ=60)
CAGTCAGGGAGTGGCTGGTACATATAGGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGG < SRR4302533.48747/94‑1 (MQ=60)
GTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCT > SRR4302533.2990345/1‑94 (MQ=60)
TCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTA < SRR4302533.5626963/94‑1 (MQ=60)
TCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTA > SRR4302533.154208/1‑94 (MQ=60)
CAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAC > SRR4302533.4408356/1‑94 (MQ=60)
CAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAC > SRR4302533.1028336/1‑94 (MQ=60)
CAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAC > SRR4302533.2101805/1‑94 (MQ=60)
AGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACA > SRR4302533.2884825/1‑94 (MQ=60)
GGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAA > SRR4302533.1499288/1‑94 (MQ=60)
GAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGACAACTTAGGGCCTCTATGGGCTACAAAG > SRR4302533.2456884/1‑94 (MQ=60)
GTGGCTGGTACATATATGGCAAAAGCCCGGAAAAAC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTC > SRR4302533.1437600/1‑94 (MQ=60)
TGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCA < SRR4302533.4669242/94‑1 (MQ=60)
GGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAT > SRR4302533.5875346/1‑94 (MQ=60)
GGCTGGTACATATATGACAAAAGCCGGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAT < SRR4302533.4407913/94‑1 (MQ=60)
GCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATT > SRR4302533.3911267/1‑94 (MQ=60)
CTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTA > SRR4302533.6212914/1‑94 (MQ=60)
CTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTA < SRR4302533.1927004/94‑1 (MQ=60)
TGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAT > SRR4302533.5326027/1‑94 (MQ=60)
TGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAT > SRR4302533.5671616/1‑94 (MQ=60)
TGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAT > SRR4302533.3182634/1‑94 (MQ=60)
TGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAT > SRR4302533.1991407/1‑94 (MQ=60)
TGGTACATATATGGCAAAAGCCAGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAT < SRR4302533.3575708/94‑1 (MQ=60)
GGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATC < SRR4302533.2304038/94‑1 (MQ=60)
GGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATC > SRR4302533.4768528/1‑94 (MQ=60)
GTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCG > SRR4302533.2097368/1‑94 (MQ=60)
TACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGG < SRR4302533.1079176/94‑1 (MQ=60)
TACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGG < SRR4302533.3719285/94‑1 (MQ=60)
ACATATATGGCAAAAGCCCGGAAAATCGGGGCT‑‑‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGG < SRR4302533.3538585/94‑1 (MQ=60)
ACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGG > SRR4302533.2197055/1‑94 (MQ=60)
ACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGG > SRR4302533.3810880/1‑94 (MQ=60)
CATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGG < SRR4302533.336048/94‑1 (MQ=60)
CATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGG < SRR4302533.5873103/94‑1 (MQ=60)
CATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGG < SRR4302533.5151730/94‑1 (MQ=60)
ATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGA > SRR4302533.3970120/1‑94 (MQ=60)
TATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGAT > SRR4302533.4065069/1‑94 (MQ=60)
ATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATG > SRR4302533.1265067/1‑94 (MQ=60)
ATATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATG < SRR4302533.4648385/94‑1 (MQ=60)
TATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGG < SRR4302533.5481420/94‑1 (MQ=60)
TATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGG < SRR4302533.3842755/94‑1 (MQ=60)
ATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGT > SRR4302533.3183258/1‑94 (MQ=60)
ATGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGT > SRR4302533.420815/1‑94 (MQ=60)
TGGCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTT > SRR4302533.6188781/1‑94 (MQ=60)
GCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTAT < SRR4302533.5154793/94‑1 (MQ=60)
GCAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTAT > SRR4302533.3051745/1‑94 (MQ=60)
CAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATT > SRR4302533.3360304/1‑94 (MQ=60)
CAAAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATT < SRR4302533.6099797/94‑1 (MQ=60)
ACAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTT < SRR4302533.3213383/94‑1 (MQ=60)
AAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTT < SRR4302533.6045558/94‑1 (MQ=60)
AAAGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTT < SRR4302533.4403342/94‑1 (MQ=60)
AGCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTAT < SRR4302533.2095547/94‑1 (MQ=60)
GCCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATT < SRR4302533.1998891/94‑1 (MQ=60)
CCCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTG > SRR4302533.893352/1‑94 (MQ=60)
CCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT > SRR4302533.1833644/1‑94 (MQ=60)
CCGGAAAATC‑‑‑‑CGGGCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT < SRR4302533.607732/94‑1 (MQ=60)
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TCAGGCGGCGATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATC‑‑‑‑CTG‑‑CTCGCAGGT‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT > NC_000913/3957456‑3957627
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
