Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,255,594 Δ1 bp coding (4/1278 nt) yhaO ← putative transport system permease protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,255,5930G.99.6% 2254.6 / 1.7 499coding (5/1278 nt)yhaOputative transport system permease protein
Reads supporting (aligned to +/- strand):  ref base G (0/1);  major base . (252/244);  minor base A (1/1);  total (253/246)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 544 total aligned reads displayed.

GCGCCAATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGGCACGACCCGCCGGGGTCGAAGGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTA  >  NC_000913/3255500‑3255683
                                                                                             |                                                                                          
 cgcCAATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAgc                                                                                           <  1:7718568/94‑2 (MQ=255)
 cgcCAATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAgc                                                                                           >  1:6884032/1‑93 (MQ=255)
  gcCAATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAgca                                                                                          >  1:4915242/1‑92 (MQ=255)
   ccAATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAgcac                                                                                         >  2:3993297/1‑91 (MQ=255)
       tCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGAcc                                                                                    <  1:7008810/94‑1 (MQ=255)
       tCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGAcc                                                                                    >  2:3522754/1‑94 (MQ=255)
         gCCATCCCGATACTCATATTCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACccg                                                                                  <  2:9248315/94‑1 (MQ=255)
         gCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACccg                                                                                  <  2:7368649/94‑1 (MQ=255)
         gCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACccg                                                                                  <  2:3256926/94‑1 (MQ=255)
         gCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATT‑CAAGCACGACccg                                                                                  >  2:3403751/1‑94 (MQ=255)
         gCCATCCCGATACTCATAATCACCCAGCCGGTGGCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCCCGACccg                                                                                  >  1:7819868/1‑94 (MQ=255)
          ccATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACccgc                                                                                 <  2:5531152/94‑1 (MQ=255)
           cATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACccgcc                                                                                >  2:9530192/1‑94 (MQ=255)
            ctCCCGATACTCATAATCCCCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACccgccg                                                                               <  1:3167579/93‑1 (MQ=255)
            aTCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACccgccg                                                                               >  2:6877600/1‑94 (MQ=255)
            aTCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACccgccg                                                                               <  2:2342704/94‑1 (MQ=255)
             tCCCGATACGAATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCgg                                                                              <  2:2078807/94‑1 (MQ=255)
               ccGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCgggg                                                                            >  1:3598323/1‑94 (MQ=255)
                cGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCGA‑GCACGACCCGCCGGGGt                                                                           <  2:1593546/94‑1 (MQ=255)
                  aTACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCg                                                                         <  1:5113599/94‑1 (MQ=255)
                  aTACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCg                                                                         >  1:9139002/1‑94 (MQ=255)
                  aTACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCg                                                                         >  1:8110004/1‑94 (MQ=255)
                    aCTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGaa                                                                       >  2:6252284/1‑94 (MQ=255)
                    aCTCATAACCCCCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCCCTCATTCCA‑GCACGACCCGCCGGGGTCGaa                                                                       <  2:4233305/94‑1 (MQ=255)
                     cTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCTCTCTCACTCATTCCA‑CCACGCCCCGCCGGGGCCGAAg                                                                      >  2:8115862/1‑94 (MQ=255)
                     cTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAAg                                                                      >  1:5971209/1‑94 (MQ=255)
                     cTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAAg                                                                      >  2:5065813/1‑94 (MQ=255)
                      tCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAAgc                                                                     <  1:7526175/94‑2 (MQ=255)
                       cATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAAgcg                                                                    <  2:3149396/94‑3 (MQ=255)
                         tAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAAgcgtc                                                                  >  2:6654221/1‑90 (MQ=255)
                            tCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGc                                                              >  1:5447480/1‑94 (MQ=255)
                              aCCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCaa                                                            >  2:6433481/1‑94 (MQ=255)
                              aCCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCaa                                                            >  1:2484098/1‑94 (MQ=255)
                               cccAGCCGGTGTCAGTACTGTCCAATTTGGTCGCTTCTCGCCACTCGCACTCACTCATTCCA‑GCACGGCCCGCCGGGGTCGAA‑GCGTCTGCAAt                                                           <  2:1903378/94‑1 (MQ=255)
                                ccAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATg                                                          <  1:10477275/94‑1 (MQ=255)
                                 cAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGa                                                         >  2:8374650/1‑94 (MQ=255)
                                 cAGCCGGTGTCAGTACTGTCGAATTTGATCGCCTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGa                                                         <  2:6995982/94‑1 (MQ=255)
                                  cgCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGAc                                                        <  2:9043058/93‑1 (MQ=255)
                                  aGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGAc                                                        >  2:1742594/1‑94 (MQ=255)
                                   gCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACg                                                       <  1:6275001/94‑1 (MQ=255)
                                   gCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACg                                                       <  1:4275466/94‑1 (MQ=255)
                                     cGGTGTCCGTCCTGTCGTATTTGATCGCTTCTCGCCCCTCGCTCTCACTCATTCC‑GGCACGCCCCGCCGGGGTCG‑GGGCGTCTGCAGTGACGcc                                                     <  1:8058025/94‑1 (MQ=255)
                                     cGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGGA‑GCGTCTGCAATGACGcc                                                     <  1:10573669/94‑1 (MQ=255)
                                     cGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGcc                                                     <  1:3278844/94‑1 (MQ=255)
                                     cGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGcc                                                     <  1:2769264/94‑1 (MQ=255)
                                      ggTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCt                                                    <  2:481098/94‑1 (MQ=255)
                                       gtgtCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCtt                                                   <  2:5303551/94‑1 (MQ=255)
                                        tgtCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCttt                                                  <  2:3901874/94‑1 (MQ=255)
                                          tCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTAt                                                >  1:1514982/1‑94 (MQ=255)
                                            aGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTc                                              <  1:7360057/94‑1 (MQ=255)
                                            aGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTc                                              >  2:782315/1‑94 (MQ=255)
                                            aGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTc                                              <  2:7169675/94‑1 (MQ=255)
                                                cTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATg                                          <  1:3938523/94‑1 (MQ=255)
                                                 tGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGc                                         >  2:8920815/1‑94 (MQ=255)
                                                   tCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCaa                                       <  2:6076428/94‑1 (MQ=255)
                                                    cGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAAt                                      <  2:4658331/94‑1 (MQ=255)
                                                      aaTTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAAttt                                    >  1:7143185/1‑94 (MQ=255)
                                                       aTTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTc                                   >  1:5726843/1‑94 (MQ=255)
                                                       aTTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTc                                   <  2:7976073/94‑1 (MQ=255)
                                                        tttGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTcc                                  >  2:2998671/1‑94 (MQ=255)
                                                            aTCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATaa                              >  1:6054663/1‑94 (MQ=255)
                                                             tCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAAt                             <  1:5237493/94‑1 (MQ=255)
                                                              cGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAAtt                            <  2:1260182/94‑1 (MQ=255)
                                                              cGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAAtt                            >  1:1109358/1‑94 (MQ=255)
                                                                cTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTtc                          >  1:2531497/1‑94 (MQ=255)
                                                                 ttCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTtct                         <  1:2082511/94‑1 (MQ=255)
                                                                 ttCTCGCCACTCGCTCTCACTCATT‑CAAGCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTtct                         <  2:2822833/94‑1 (MQ=255)
                                                                   ctcGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCg                       >  2:10105834/1‑94 (MQ=255)
                                                                    tcGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCCATTTCCATAATTTCTCGc                      >  2:4368460/1‑94 (MQ=255)
                                                                     tgCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCt                     >  1:2264349/2‑94 (MQ=255)
                                                                     cGCTACTCACTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCt                     <  1:4720636/94‑1 (MQ=255)
                                                                     cGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATTACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCt                     >  2:3754554/1‑94 (MQ=255)
                                                                       ccACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCa                   <  2:6511533/94‑1 (MQ=255)
                                                                       ccACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCa                   >  1:8562517/1‑94 (MQ=255)
                                                                         aCTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAat                 <  1:832677/94‑1 (MQ=255)
                                                                         aCTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGGCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAat                 >  1:10325306/1‑94 (MQ=255)
                                                                           tCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAatat               >  2:2531438/1‑94 (MQ=255)
                                                                           ccGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAatat               <  2:5662797/93‑1 (MQ=255)
                                                                            cGCTCTCACTCATTCCA‑GCCCGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATAtt              <  2:874398/94‑1 (MQ=255)
                                                                            cGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATAtt              <  1:6711652/94‑1 (MQ=255)
                                                                             gCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATAttt             >  1:9803121/1‑94 (MQ=255)
                                                                             cgactcaataaTTCCA‑GCACTACCCGCCGGTGTCGAA‑GCGTCTGCAATGACCACTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATAttt             <  2:8581248/91‑1 (MQ=255)
                                                                              ctctCACTCATTCCA‑GCACGGCCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATAtttt            <  1:9339727/94‑1 (MQ=255)
                                                                              ctctCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATAtttt            <  1:3559573/94‑1 (MQ=255)
                                                                              ctctCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATAtttt            <  1:958297/94‑1 (MQ=255)
                                                                               tctcACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTg           <  2:9823548/94‑1 (MQ=255)
                                                                               tctcACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTg           >  1:88031/1‑94 (MQ=255)
                                                                                ctcactcaTTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGt          >  2:10611153/1‑94 (MQ=255)
                                                                                ctcactcaTTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGt          >  1:2930934/1‑94 (MQ=255)
                                                                                ctcactcaTTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGt          <  1:9680368/94‑1 (MQ=255)
                                                                                 tcactcaTTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTa         <  1:6451987/94‑1 (MQ=255)
                                                                                 tcactcaTTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTa         >  1:1709070/1‑94 (MQ=255)
                                                                                  cactcaTTCCA‑GCCCGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAg        <  1:7622689/94‑1 (MQ=255)
                                                                                  cactcaTTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAg        >  1:3400216/1‑94 (MQ=255)
                                                                                   actcaTTCCA‑GCACGACACGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAgg       >  1:10040241/1‑94 (MQ=255)
                                                                                   actcaTT‑CAAGCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAgg       >  1:4484584/1‑94 (MQ=255)
                                                                                      caTTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCt    >  2:10502625/1‑94 (MQ=255)
                                                                                       aTTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCtt   >  2:459825/1‑94 (MQ=255)
                                                                                        ttCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCtta  <  2:10278127/94‑1 (MQ=255)
                                                                                        ttCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCtta  >  1:140562/1‑94 (MQ=255)
                                                                                             |                                                                                          
GCGCCAATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGGCACGACCCGCCGGGGTCGAAGGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTA  >  NC_000913/3255500‑3255683

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 289 total aligned reads displayed.
TCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGGCACGACCCGCCGGGGTCGAAGGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCGAGCCGCATCAAGG  >  NC_000913/3255522‑3255709
                                                                                              |                                                                                             
TCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAAGC                                                                                               <  SRR4302545.7739093/94‑1 (MQ=60)
TCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAAGC                                                                                               >  SRR4302545.8285902/1‑94 (MQ=60)
TCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAAGC                                                                                               <  SRR4302545.10832472/94‑1 (MQ=60)
  ATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGT                                                                                            >  SRR4302545.4818392/1‑94 (MQ=60)
  ATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGT                                                                                            >  SRR4302545.4847850/1‑94 (MQ=60)
   TAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTC                                                                                           >  SRR4302545.9151962/1‑94 (MQ=60)
    AATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCT                                                                                          >  SRR4302545.7827857/1‑94 (MQ=60)
    AATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCT                                                                                          >  SRR4302545.7827856/1‑94 (MQ=60)
     ATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTG                                                                                         <  SRR4302545.5371148/94‑1 (MQ=60)
      TCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGC                                                                                        >  SRR4302545.5590077/1‑94 (MQ=60)
       CACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCA                                                                                       <  SRR4302545.8982737/94‑1 (MQ=60)
       CACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCA                                                                                       <  SRR4302545.7102748/94‑1 (MQ=60)
       CACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCA                                                                                       <  SRR4302545.8314559/94‑1 (MQ=60)
       CACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCA                                                                                       >  SRR4302545.3457274/1‑94 (MQ=60)
        ACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAA                                                                                      >  SRR4302545.2544161/1‑94 (MQ=60)
         CCCAGCGGGTGTCATTCCTGTCGAATTTGATCGCTCCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAAT                                                                                     <  SRR4302545.133526/94‑1 (MQ=60)
         CCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAAT                                                                                     <  SRR4302545.5032006/94‑1 (MQ=60)
          CCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATG                                                                                    <  SRR4302545.6541975/94‑1 (MQ=60)
          CCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATG                                                                                    >  SRR4302545.3675500/1‑94 (MQ=60)
          CCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATG                                                                                    <  SRR4302545.10786164/94‑1 (MQ=60)
          CCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATG                                                                                    <  SRR4302545.2715595/94‑1 (MQ=60)
          CCAGCCGGTGCCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCCCTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATG                                                                                    <  SRR4302545.5925366/94‑1 (MQ=60)
            AGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGAC                                                                                  <  SRR4302545.7999184/94‑1 (MQ=60)
             GCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACG                                                                                 <  SRR4302545.4382869/94‑1 (MQ=60)
             GCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACG                                                                                 <  SRR4302545.6446084/94‑1 (MQ=60)
             GCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACG                                                                                 <  SRR4302545.6894558/94‑1 (MQ=60)
               CGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGGA‑GCGTCTGCAATGACGCC                                                                               <  SRR4302545.10885134/94‑1 (MQ=60)
               CGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCC                                                                               <  SRR4302545.3359216/94‑1 (MQ=60)
               CGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCC                                                                               <  SRR4302545.2836096/94‑1 (MQ=60)
               CGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCCGCAATGACGGC                                                                               >  SRR4302545.4596023/1‑94 (MQ=60)
                GGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCT                                                                              >  SRR4302545.8091587/1‑94 (MQ=60)
                GGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCT                                                                              >  SRR4302545.9836738/1‑94 (MQ=60)
                GGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCT                                                                              >  SRR4302545.7360801/1‑94 (MQ=60)
                GGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCT                                                                              >  SRR4302545.7869790/1‑94 (MQ=60)
                 GTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTT                                                                             <  SRR4302545.5746418/94‑1 (MQ=60)
                 GTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTT                                                                             <  SRR4302545.5746419/94‑1 (MQ=60)
                  TGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTT                                                                            >  SRR4302545.497529/1‑94 (MQ=60)
                    TCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTAT                                                                          <  SRR4302545.4454399/94‑1 (MQ=60)
                    TCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTAT                                                                          <  SRR4302545.247543/94‑1 (MQ=60)
                    TCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTAT                                                                          >  SRR4302545.1550315/1‑94 (MQ=60)
                     CAGTACTGTCGAATTTGATCGCTTCTCGCCCCTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATT                                                                         <  SRR4302545.9085663/94‑1 (MQ=60)
                     CAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCCATGACGCCTTTATT                                                                         >  SRR4302545.3719302/1‑94 (MQ=60)
                     CAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATT                                                                         <  SRR4302545.8282162/94‑1 (MQ=60)
                     CAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATT                                                                         >  SRR4302545.3719306/1‑94 (MQ=60)
                     CAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATT                                                                         >  SRR4302545.10275612/1‑94 (MQ=60)
                      AGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTC                                                                        <  SRR4302545.1373763/94‑1 (MQ=60)
                      AGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTC                                                                        <  SRR4302545.7567145/94‑1 (MQ=60)
                      AGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTC                                                                        <  SRR4302545.7934785/94‑1 (MQ=60)
                       GTACTTTGGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCG                                                                       <  SRR4302545.2307849/94‑1 (MQ=60)
                       GTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCG                                                                       >  SRR4302545.4085406/1‑94 (MQ=60)
                       GTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCG                                                                       <  SRR4302545.7291869/94‑1 (MQ=60)
                        TACTGTTGAATTTGTTCGCTTCTCGCCACTCTCTCTCCCTCATTTCA‑GCACGCCCCGCCGGGGTCGAA‑GCCTCTGCAATGACGCCTTTATTCGA                                                                      <  SRR4302545.7189700/94‑1 (MQ=43)
                        TACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGA                                                                      <  SRR4302545.5491765/94‑1 (MQ=60)
                         ACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCCGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGAT                                                                     >  SRR4302545.2110412/1‑94 (MQ=60)
                          CTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATG                                                                    <  SRR4302545.1622798/94‑1 (MQ=60)
                          CTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATG                                                                    <  SRR4302545.4036876/94‑1 (MQ=60)
                           TGTCCAATTTGACCGCTTCTCGCCCCTCGCTCTCACTCATTCCA‑GCACGCCCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGC                                                                   <  SRR4302545.8150537/94‑1 (MQ=60)
                            GTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCA                                                                  >  SRR4302545.7101795/1‑94 (MQ=60)
                            GTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCA                                                                  >  SRR4302545.8437312/1‑94 (MQ=60)
                            GTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCA                                                                  >  SRR4302545.738332/1‑94 (MQ=60)
                             TCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAA                                                                 <  SRR4302545.2674287/94‑1 (MQ=60)
                             TCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAA                                                                 >  SRR4302545.4469809/1‑94 (MQ=60)
                              CGAATTTGATCGCTTCTCGCCCCTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAAT                                                                <  SRR4302545.10197071/94‑1 (MQ=60)
                              CGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAAT                                                                >  SRR4302545.3394177/1‑94 (MQ=60)
                                AATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTT                                                              >  SRR4302545.3264452/1‑94 (MQ=60)
                                AATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTT                                                              <  SRR4302545.5479234/94‑1 (MQ=60)
                                AATTTGACCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTT                                                              <  SRR4302545.10841714/94‑1 (MQ=60)
                                AAGTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTT                                                              <  SRR4302545.2105843/94‑1 (MQ=60)
                                 ATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTC                                                             >  SRR4302545.5880493/1‑94 (MQ=60)
                                 ATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTC                                                             >  SRR4302545.374128/1‑94 (MQ=60)
                                  TTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCC                                                            >  SRR4302545.8805673/1‑94 (MQ=60)
                                   TTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGATGCCTTTATTCGATGCAATTTCCA                                                           >  SRR4302545.7805124/1‑94 (MQ=60)
                                    TGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCAT                                                          >  SRR4302545.3248552/1‑94 (MQ=60)
                                    TGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCAT                                                          <  SRR4302545.3679164/94‑1 (MQ=60)
                                      ATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAA                                                        >  SRR4302545.1698527/1‑94 (MQ=60)
                                      ATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAA                                                        >  SRR4302545.6218800/1‑94 (MQ=60)
                                      ATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAA                                                        >  SRR4302545.5835191/1‑94 (MQ=60)
                                       TCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAAT                                                       <  SRR4302545.5372614/94‑1 (MQ=60)
                                       TCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAAT                                                       >  SRR4302545.1061896/1‑94 (MQ=60)
                                        CGCTTCTCGCCACTCGCTCTCCCTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATT                                                      <  SRR4302545.4089576/94‑1 (MQ=60)
                                        CGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATT                                                      >  SRR4302545.3269406/1‑94 (MQ=60)
                                        CGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATT                                                      >  SRR4302545.3205273/1‑94 (MQ=60)
                                        CGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATT                                                      >  SRR4302545.1133535/1‑94 (MQ=60)
                                         CCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGCCCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTT                                                     <  SRR4302545.6770596/94‑1 (MQ=60)
                                          CTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTC                                                    >  SRR4302545.8354202/1‑94 (MQ=60)
                                          CTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTC                                                    >  SRR4302545.2592649/1‑94 (MQ=60)
                                          CTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTC                                                    >  SRR4302545.10897767/1‑94 (MQ=60)
                                          CTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTC                                                    >  SRR4302545.6403378/1‑94 (MQ=60)
                                          CTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTC                                                    >  SRR4302545.6522557/1‑94 (MQ=60)
                                           TTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCT                                                   <  SRR4302545.1920191/94‑1 (MQ=60)
                                           TTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCT                                                   <  SRR4302545.2590346/94‑1 (MQ=60)
                                           TCCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCT                                                   <  SRR4302545.5903594/94‑1 (MQ=60)
                                            TCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTC                                                  <  SRR4302545.9560193/94‑1 (MQ=60)
                                             CTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCG                                                 >  SRR4302545.7575284/1‑94 (MQ=60)
                                              TCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGC                                                >  SRR4302545.6165449/1‑94 (MQ=60)
                                              TCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGC                                                >  SRR4302545.3567481/1‑94 (MQ=60)
                                               TGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCT                                               >  SRR4302545.2319432/1‑94 (MQ=60)
                                               CGCTACTCACTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCT                                               <  SRR4302545.4840980/94‑1 (MQ=60)
                                               CGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCT                                               >  SRR4302545.4699622/1‑94 (MQ=60)
                                                GCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGCTGCAATTTCCATAATTTCTCGCTC                                              >  SRR4302545.2981052/1‑94 (MQ=60)
                                                GCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTC                                              >  SRR4302545.1034581/1‑94 (MQ=60)
                                                 CCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCA                                             >  SRR4302545.8810101/1‑94 (MQ=60)
                                                 CCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCA                                             >  SRR4302545.10569841/1‑94 (MQ=60)
                                                 CCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCA                                             <  SRR4302545.8317774/94‑1 (MQ=60)
                                                   CCTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAAT                                           <  SRR4302545.7402107/94‑1 (MQ=60)
                                                   ACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAAT                                           >  SRR4302545.2546697/1‑94 (MQ=60)
                                                   ACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAAT                                           <  SRR4302545.851368/94‑1 (MQ=60)
                                                   ACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAAT                                           >  SRR4302545.6601937/1‑94 (MQ=60)
                                                   ACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGGCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAAT                                           >  SRR4302545.10629743/1‑94 (MQ=60)
                                                    CTCGCTCTCACTCATTCCA‑GCTCGCCCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATA                                          <  SRR4302545.2352620/94‑1 (MQ=60)
                                                    CTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGTTCTAA‑GCGTCTGCAATGACGCCTTTATTCGTTGCAATTTCCATAATTTCTCGCTCAATA                                          >  SRR4302545.9925056/1‑94 (MQ=60)
                                                    CTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATA                                          >  SRR4302545.1449304/1‑94 (MQ=60)
                                                    CTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATA                                          >  SRR4302545.6920938/1‑94 (MQ=60)
                                                    CTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATA                                          >  SRR4302545.5305826/1‑94 (MQ=60)
                                                     TCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATAT                                         <  SRR4302545.9431129/94‑1 (MQ=60)
                                                     TCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATAT                                         <  SRR4302545.6285031/94‑1 (MQ=60)
                                                      CGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATT                                        <  SRR4302545.6160956/94‑1 (MQ=60)
                                                       GCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTT                                       >  SRR4302545.10094410/1‑94 (MQ=60)
                                                       GCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTT                                       <  SRR4302545.1490874/94‑1 (MQ=60)
                                                        CTCTCACTCATTCCA‑GCACGGCCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTT                                      <  SRR4302545.9613560/94‑1 (MQ=60)
                                                        CTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTT                                      >  SRR4302545.3663773/1‑94 (MQ=60)
                                                        CTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTT                                      <  SRR4302545.979821/94‑1 (MQ=60)
                                                        CTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTT                                      <  SRR4302545.3646585/94‑1 (MQ=60)
                                                        CTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTT                                      >  SRR4302545.3867806/1‑94 (MQ=60)
                                                        CTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GAGTCTGCAATGACCCCTTTATTCGATGCAATTTCCATAATTTCCCGCTCAATATTTT                                      <  SRR4302545.8466980/94‑1 (MQ=60)
                                                         TCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTG                                     >  SRR4302545.4570767/1‑94 (MQ=60)
                                                         TCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTG                                     >  SRR4302545.2210707/1‑94 (MQ=60)
                                                         TCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTG                                     >  SRR4302545.90060/1‑94 (MQ=60)
                                                          ttcttTCATTCCA‑GCACGACCCGCCGGAGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGT                                    <  SRR4302545.10094257/89‑1 (MQ=60)
                                                          CTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGT                                    >  SRR4302545.2913822/1‑94 (MQ=60)
                                                          CTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGT                                    >  SRR4302545.3002170/1‑94 (MQ=60)
                                                          CTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGT                                    <  SRR4302545.9967737/94‑1 (MQ=60)
                                                          CTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGT                                    >  SRR4302545.5931998/1‑94 (MQ=60)
                                                          CTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGT                                    >  SRR4302545.10463502/1‑94 (MQ=60)
                                                           TCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTA                                   >  SRR4302545.1749728/1‑94 (MQ=60)
                                                           TCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTA                                   <  SRR4302545.6628377/94‑1 (MQ=60)
                                                            CACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAG                                  <  SRR4302545.7656567/94‑1 (MQ=60)
                                                            CACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAG                                  <  SRR4302545.2740781/94‑1 (MQ=60)
                                                            CACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAG                                  >  SRR4302545.3483117/1‑94 (MQ=60)
                                                            CACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAG                                  >  SRR4302545.529394/1‑94 (MQ=60)
                                                            CACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAG                                  <  SRR4302545.6224784/94‑1 (MQ=60)
                                                             CCTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGG                                 <  SRR4302545.10858424/94‑1 (MQ=60)
                                                             ACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGG                                 <  SRR4302545.6984917/94‑1 (MQ=60)
                                                             ACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGG                                 <  SRR4302545.9856179/94‑1 (MQ=60)
                                                             ACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGG                                 <  SRR4302545.6930448/94‑1 (MQ=60)
                                                              CTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGG                                <  SRR4302545.3054994/94‑1 (MQ=60)
                                                              CTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGG                                <  SRR4302545.865510/94‑1 (MQ=60)
                                                               TCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGC                               <  SRR4302545.4482558/94‑1 (MQ=60)
                                                                 ATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTT                             >  SRR4302545.3619992/1‑94 (MQ=60)
                                                                 ATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTT                             <  SRR4302545.7865491/94‑1 (MQ=60)
                                                                 ATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTT                             >  SRR4302545.9068772/1‑94 (MQ=60)
                                                                  TTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTA                            <  SRR4302545.1706009/94‑1 (MQ=60)
                                                                   TCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTAT                           >  SRR4302545.7623285/1‑94 (MQ=60)
                                                                    CCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATT                          >  SRR4302545.9577410/1‑94 (MQ=60)
                                                                    CCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATT                          >  SRR4302545.5473628/1‑94 (MQ=60)
                                                                      caGCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTA                         <  SRR4302545.6550324/92‑1 (MQ=60)
                                                                       AGCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTAT                        <  SRR4302545.7760186/94‑1 (MQ=60)
                                                                       AGCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTAT                        >  SRR4302545.2297560/1‑94 (MQ=60)
                                                                       AGCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTAT                        <  SRR4302545.4863929/94‑1 (MQ=60)
                                                                       AGCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTAT                        <  SRR4302545.9810817/94‑1 (MQ=60)
                                                                       AGCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTAT                        <  SRR4302545.9742795/94‑1 (MQ=60)
                                                                         CACGACCCTCCGGGGTCTAA‑TCGGCTGCAAGGACGCCTATATTCGAGGCATTTTCCATAATTTTTCGCTCAATATTTTGTAGGGCagaataggt                      >  SRR4302545.9975643/1‑85 (MQ=28)
                                                                         CACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTT                      <  SRR4302545.10099936/94‑1 (MQ=60)
                                                                         CACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTT                      <  SRR4302545.729092/94‑1 (MQ=60)
                                                                         CACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTT                      <  SRR4302545.8779312/94‑1 (MQ=60)
                                                                          ACGACCCGCCGGAGTAGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTAAATATTTTGTAGGGCTTATTATTTT                     <  SRR4302545.9651424/94‑1 (MQ=60)
                                                                           CGCCCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTT                    <  SRR4302545.5586128/94‑1 (MQ=60)
                                                                            GACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTT                   >  SRR4302545.8126927/1‑94 (MQ=60)
                                                                            GACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTT                   <  SRR4302545.1546677/94‑1 (MQ=60)
                                                                            GACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTT                   >  SRR4302545.4370109/1‑94 (MQ=60)
                                                                             CCCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTT                  <  SRR4302545.8017596/94‑1 (MQ=60)
                                                                             ACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTT                  >  SRR4302545.5338662/1‑94 (MQ=60)
                                                                             ACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTT                  <  SRR4302545.8017594/94‑1 (MQ=60)
                                                                              CCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTC                 <  SRR4302545.6454771/94‑1 (MQ=60)
                                                                              CCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTC                 <  SRR4302545.7179548/94‑1 (MQ=60)
                                                                               CCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCC                <  SRR4302545.5174882/94‑1 (MQ=60)
                                                                               CCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCC                <  SRR4302545.40133/94‑1 (MQ=60)
                                                                               CCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCC                <  SRR4302545.4019153/94‑1 (MQ=60)
                                                                                CGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCG               <  SRR4302545.5726595/94‑1 (MQ=60)
                                                                                 GCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCTATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCGA              >  SRR4302545.6474860/1‑94 (MQ=60)
                                                                                 GCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCGA              >  SRR4302545.9725618/1‑94 (MQ=60)
                                                                                   CGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCGAGC            <  SRR4302545.2020917/94‑1 (MQ=60)
                                                                                   CGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCGAGC            >  SRR4302545.9338776/1‑94 (MQ=60)
                                                                                   CGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCGAGC            >  SRR4302545.9908909/1‑94 (MQ=60)
                                                                                   CGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCGAGC            >  SRR4302545.10203123/1‑94 (MQ=60)
                                                                                    GGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCGAGCC           >  SRR4302545.4728366/1‑94 (MQ=60)
                                                                                    GGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCGAGCC           >  SRR4302545.1576491/1‑94 (MQ=60)
                                                                                    GGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCGAGCC           >  SRR4302545.2183662/1‑94 (MQ=60)
                                                                                      GGTCGAA‑GCGTCGGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCGAGCCGC         <  SRR4302545.4909481/94‑1 (MQ=60)
                                                                                       GTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCGAGCCGCA        >  SRR4302545.6715701/1‑94 (MQ=60)
                                                                                        TCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCGAGCCGCAT       <  SRR4302545.5039229/94‑1 (MQ=60)
                                                                                         CGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCGAGCCGCATC      >  SRR4302545.9894586/1‑94 (MQ=60)
                                                                                         CGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCGAGCCGCATC      <  SRR4302545.4219846/94‑1 (MQ=60)
                                                                                         CGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCGAGCCGCATC      >  SRR4302545.5934644/1‑94 (MQ=60)
                                                                                         CGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCGAGCCGCATC      <  SRR4302545.641002/94‑1 (MQ=60)
                                                                                           AAAGCTTCTGCAATGACGCTATTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTGCCGAGCCGCATCA     <  SRR4302545.4840571/94‑1 (MQ=60)
                                                                                            AAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATTTTTTGCAGGGCTTATTTTTTTTTTCCGAGCCGCATCAA    <  SRR4302545.8383274/94‑1 (MQ=60)
                                                                                            AAGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCGAGCCGCATCAA    >  SRR4302545.4341128/1‑94 (MQ=60)
                                                                                             AGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCGAGCCGCATCAAG   <  SRR4302545.3580477/94‑1 (MQ=60)
                                                                                              GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCGAGCCGCATCAAGG  <  SRR4302545.10322590/94‑1 (MQ=60)
                                                                                              |                                                                                             
TCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGGCACGACCCGCCGGGGTCGAAGGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTATTTTTTTCCGAGCCGCATCAAGG  >  NC_000913/3255522‑3255709

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑