Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,500,309 Δ1 bp coding (333/363 nt) b3372 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,500,3080C.99.6% 2543.2 / ‑1.8 559coding (332/363 nt)b3372hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (2/0);  new base . (300/257);  total (302/257)
Fisher's exact test for biased strand distribution p-value = 5.02e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 622 total aligned reads displayed.

GCGATGAACATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCG  >  NC_000913/3500215‑3500401
                                                                                             |                                                                                             
 cGATGAACATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGCTATGGCAAAAGAGATGAATGCGGGTTATATGCTGATTTccgcg                                                                                              >  2:9351154/1‑93 (MQ=255)
 cGATGAACATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTccgcg                                                                                              >  2:5874356/1‑93 (MQ=255)
 cGATGAACAGATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTccgcg                                                                                              <  2:10300517/94‑2 (MQ=255)
  gATGAACATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTccgcgg                                                                                             >  2:7898550/1‑92 (MQ=255)
  gATGAACATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTccgcgg                                                                                             <  1:9782412/94‑3 (MQ=255)
  gATGAACATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTccgcgc                                                                                             >  2:3480903/1‑92 (MQ=255)
   aTGAACATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTccgcggc                                                                                            >  1:7003347/1‑91 (MQ=255)
   aTGAACATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTccgcggc                                                                                            >  1:1284988/1‑91 (MQ=255)
    tGAACATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTccgcggcc                                                                                           >  1:6396867/1‑90 (MQ=255)
    tGAACATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTccgcggcc                                                                                           >  2:6238467/1‑90 (MQ=255)
      aaCATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCa                                                                                        <  2:5046924/94‑1 (MQ=255)
      aaCATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCa                                                                                        >  1:4961456/1‑94 (MQ=255)
       aCATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCAc                                                                                       <  2:3347575/94‑1 (MQ=255)
         atatGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGGTATACGCTGATTTCCG‑CGGCCCAcgc                                                                                     >  2:8856333/1‑94 (MQ=255)
          tatGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCAcgcg                                                                                    >  2:233995/1‑94 (MQ=255)
           atGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCgg                                                                                   <  2:3644552/94‑1 (MQ=255)
           atGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCgg                                                                                   >  1:1639826/1‑94 (MQ=255)
            tGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCACACGCggg                                                                                  >  1:5597526/1‑94 (MQ=255)
             gCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGc                                                                                 >  1:2175763/1‑94 (MQ=255)
               gTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTa                                                                               >  1:8838554/1‑94 (MQ=255)
               gTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTa                                                                               >  2:4597719/1‑94 (MQ=255)
                tCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTAt                                                                              <  1:7227515/94‑1 (MQ=255)
                 cgcgAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTAtc                                                                             >  1:3680706/1‑94 (MQ=255)
                  gcgAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTAtct                                                                            <  1:3354872/94‑1 (MQ=255)
                  gcgAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTAtct                                                                            >  1:3176962/1‑94 (MQ=255)
                   cgAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTAtctc                                                                           >  1:8029792/1‑94 (MQ=255)
                    gAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCa                                                                          >  1:3486009/1‑94 (MQ=255)
                     aaaGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCAc                                                                         >  2:1174697/1‑94 (MQ=255)
                     aaaGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCAc                                                                         <  2:1381352/94‑1 (MQ=255)
                     aaaGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCAc                                                                         >  1:6667066/1‑94 (MQ=255)
                     aaaGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCAc                                                                         <  1:10489579/94‑1 (MQ=255)
                      aaGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACg                                                                        <  2:1468159/94‑1 (MQ=255)
                      aaGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACg                                                                        >  1:3004915/1‑94 (MQ=255)
                      aaGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACg                                                                        >  1:9523471/1‑94 (MQ=255)
                        gCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGcc                                                                      <  2:7122265/94‑1 (MQ=255)
                         ccTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGccc                                                                     >  2:1833940/1‑93 (MQ=255)
                         ccTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGcac                                                                     >  1:9099340/1‑92 (MQ=255)
                          cTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCAc                                                                    >  1:5778933/1‑94 (MQ=255)
                            cGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCt                                                                  <  2:1543144/94‑1 (MQ=255)
                              aCATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTaa                                                                <  2:4369968/94‑1 (MQ=255)
                              aCATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTaa                                                                >  2:6796381/1‑94 (MQ=255)
                                aTGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATg                                                              >  1:7725700/1‑94 (MQ=255)
                                 tGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGt                                                             <  1:4225057/94‑1 (MQ=255)
                                     cAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATc                                                         <  1:4705480/94‑1 (MQ=255)
                                     cAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATc                                                         >  2:2746396/1‑94 (MQ=255)
                                      aaGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCt                                                        <  2:2254150/94‑1 (MQ=255)
                                       aGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTg                                                       <  1:897602/94‑1 (MQ=255)
                                          tGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTgggg                                                    >  1:8218183/1‑94 (MQ=255)
                                           ggCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTggggc                                                   >  1:10279211/1‑93 (MQ=255)
                                           ggCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGa                                                   <  2:10526522/94‑1 (MQ=255)
                                            gCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGAc                                                  >  2:6348743/1‑94 (MQ=255)
                                               aTGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTCTCTCACGCCACCTAATGTTATCTGGGGACGGc                                               >  2:5275132/1‑94 (MQ=255)
                                               aTGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGc                                               >  2:2843295/1‑94 (MQ=255)
                                                  gATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTgg                                            >  1:9992466/1‑94 (MQ=255)
                                                  gATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTgg                                            >  2:2525109/1‑94 (MQ=255)
                                                   atatGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGc                                           >  2:32294/1‑94 (MQ=255)
                                                    tatGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCa                                          <  1:5163847/94‑1 (MQ=255)
                                                      tGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCaga                                        >  1:4106079/1‑94 (MQ=255)
                                                        gCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAgaga                                      <  2:767588/94‑1 (MQ=255)
                                                        gCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAgaga                                      >  2:4950662/1‑94 (MQ=255)
                                                        gCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAgaga                                      <  1:6503196/94‑1 (MQ=255)
                                                         cAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGaa                                     >  2:7209388/1‑94 (MQ=255)
                                                         cAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGaa                                     >  2:9600542/1‑94 (MQ=255)
                                                            aaGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCt                                  >  1:7413897/1‑94 (MQ=255)
                                                            aaGAGAGGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCt                                  <  1:2658720/94‑1 (MQ=255)
                                                             agagATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTa                                 <  1:1003865/94‑1 (MQ=255)
                                                             agagATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTa                                 >  2:6051778/1‑94 (MQ=255)
                                                             agagATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTa                                 >  1:8513945/1‑94 (MQ=255)
                                                              gagaTGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGCGAACCTaa                                >  2:8707726/1‑94 (MQ=255)
                                                              gagaTGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTaa                                <  2:7466172/94‑1 (MQ=255)
                                                               agaTGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAg                               >  2:2154026/1‑94 (MQ=255)
                                                                gaTGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGc                              <  2:10604920/94‑1 (MQ=255)
                                                                gaTGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGc                              <  1:9651831/94‑1 (MQ=255)
                                                                  tGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGa                            <  2:8582947/94‑1 (MQ=255)
                                                                   gAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGaa                           >  1:1075698/1‑94 (MQ=255)
                                                                   gAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGaa                           >  2:1025656/1‑94 (MQ=255)
                                                                   gAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGaa                           >  2:8267680/1‑94 (MQ=255)
                                                                   gAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGaa                           <  2:2969604/94‑1 (MQ=255)
                                                                   gAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGaa                           <  2:9056280/94‑1 (MQ=255)
                                                                   gAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGaa                           <  2:4855570/94‑1 (MQ=255)
                                                                      cgcgGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACtg                        >  2:3927675/1‑94 (MQ=255)
                                                                       gcgGTTTATACGCTGATGTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACtgt                       <  1:2520/94‑1 (MQ=255)
                                                                        cgGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACtgtg                      <  1:442104/94‑1 (MQ=255)
                                                                          ggTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACtgtgtg                    <  1:8142076/94‑1 (MQ=255)
                                                                          ggTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACtgtgtg                    <  1:2793648/94‑1 (MQ=255)
                                                                            ttATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAg                  <  1:10404971/94‑1 (MQ=255)
                                                                            ttATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAg                  <  1:8679537/94‑1 (MQ=255)
                                                                            ttATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAg                  >  1:7550619/1‑94 (MQ=255)
                                                                              ataCGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTa                >  2:10371862/1‑94 (MQ=255)
                                                                              ataCGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTa                <  2:5760681/94‑1 (MQ=255)
                                                                              ataCGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTa                >  2:545435/1‑94 (MQ=255)
                                                                               taCGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTAc               >  1:3818095/1‑94 (MQ=255)
                                                                               taCGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTAc               <  1:6172633/94‑1 (MQ=255)
                                                                                aCGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTAcg              <  1:535269/94‑1 (MQ=255)
                                                                                 cGCTGATTTCCG‑CGGGCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTAcgc             >  1:9303207/1‑94 (MQ=255)
                                                                                 cGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTAcgc             >  2:8360777/1‑94 (MQ=255)
                                                                                   cTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCgg           >  2:4114952/1‑94 (MQ=255)
                                                                                    tGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGa          >  2:6550476/1‑94 (MQ=255)
                                                                                    tGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGa          >  1:1980939/1‑94 (MQ=255)
                                                                                        ttCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAAc      <  1:458190/94‑1 (MQ=255)
                                                                                             |                                                                                             
GCGATGAACATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCG  >  NC_000913/3500215‑3500401

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 376 total aligned reads displayed.
GGCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCCTTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGATG  >  NC_000913/3509865‑3510051
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GGCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCCTTC                                                                                               <  SRR4302545.3592626/94‑1 (MQ=60)
GGCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCCTTC                                                                                               <  SRR4302545.3310177/94‑1 (MQ=60)
   ATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTT                                                                                           >  SRR4302545.4446786/1‑94 (MQ=60)
   ATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTT                                                                                           >  SRR4302545.3038016/1‑94 (MQ=60)
    TTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTT                                                                                          <  SRR4302545.1867119/94‑1 (MQ=60)
    TTCATTTGCCAGCTCATCTATGGATTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTT                                                                                          >  SRR4302545.5825358/1‑94 (MQ=60)
     TCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTT                                                                                         >  SRR4302545.7282560/1‑94 (MQ=60)
     TCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTT                                                                                         >  SRR4302545.687012/1‑94 (MQ=60)
     TCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTT                                                                                         >  SRR4302545.10710092/1‑94 (MQ=60)
     TCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTT                                                                                         <  SRR4302545.6283671/94‑1 (MQ=60)
      CATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTT                                                                                        >  SRR4302545.10346882/1‑94 (MQ=60)
      CATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTT                                                                                        >  SRR4302545.8135882/1‑94 (MQ=60)
      CATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTT                                                                                        <  SRR4302545.7261152/94‑1 (MQ=60)
      CATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTT                                                                                        >  SRR4302545.7177541/1‑94 (MQ=60)
       ATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTG                                                                                       <  SRR4302545.2169733/94‑1 (MQ=60)
       ATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTG                                                                                       >  SRR4302545.8518496/1‑94 (MQ=60)
           gtcatCTCATTTATGGTTTTCAATCGATTACCGCACTCTTCACCCAACAAACAACGGGCCAGCGTCGTGATGACGATGCC‑TTCTTTTTTGATAA                                                                                   >  SRR4302545.9616743/6‑94 (MQ=60)
           GCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAA                                                                                   <  SRR4302545.1250159/94‑1 (MQ=60)
           GCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAA                                                                                   <  SRR4302545.4655897/94‑1 (MQ=60)
           GCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAA                                                                                   <  SRR4302545.10095585/94‑1 (MQ=60)
            CCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAA                                                                                  <  SRR4302545.4390554/94‑1 (MQ=60)
             CAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAAC                                                                                 <  SRR4302545.9961760/94‑1 (MQ=60)
             CAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAAC                                                                                 <  SRR4302545.4984613/94‑1 (MQ=60)
             CAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAAC                                                                                 <  SRR4302545.2998222/94‑1 (MQ=60)
             CAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAAC                                                                                 <  SRR4302545.5326253/94‑1 (MQ=60)
             CAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAAC                                                                                 <  SRR4302545.1241010/94‑1 (MQ=60)
             CAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAAC                                                                                 >  SRR4302545.7340025/1‑94 (MQ=60)
             CAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGCCCAGCGTCATGAGGACGACGCC‑TCCTTTTTTGATAAAC                                                                                 <  SRR4302545.10766561/94‑1 (MQ=60)
              AGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACG                                                                                <  SRR4302545.6163002/94‑1 (MQ=60)
               GCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGT                                                                               <  SRR4302545.8971864/94‑1 (MQ=60)
                CTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTT                                                                              <  SRR4302545.5827363/94‑1 (MQ=60)
                CTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTT                                                                              >  SRR4302545.3132358/1‑94 (MQ=60)
                CTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTT                                                                              <  SRR4302545.4159058/94‑1 (MQ=60)
                 TCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTC                                                                             <  SRR4302545.2826140/94‑1 (MQ=60)
                 TCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTC                                                                             <  SRR4302545.3184508/94‑1 (MQ=60)
                   ATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGAGGACGCCTTT‑TTTTTTGATAAAAGTTTGA                                                                           >  SRR4302545.4239476/1‑94 (MQ=60)
                   ATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGA                                                                           >  SRR4302545.10172715/1‑94 (MQ=60)
                   ATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGA                                                                           >  SRR4302545.1370936/1‑94 (MQ=60)
                     CTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACG                                                                         <  SRR4302545.7306707/94‑1 (MQ=60)
                     CTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACG                                                                         <  SRR4302545.3091600/94‑1 (MQ=60)
                     CTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACG                                                                         <  SRR4302545.42551/94‑1 (MQ=60)
                     CTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACG                                                                         <  SRR4302545.5504217/94‑1 (MQ=60)
                      TATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGC                                                                        >  SRR4302545.8255781/1‑94 (MQ=60)
                      TATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGC                                                                        >  SRR4302545.8255784/1‑94 (MQ=60)
                       ATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCA                                                                       >  SRR4302545.2657144/1‑94 (MQ=60)
                       ATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCA                                                                       <  SRR4302545.570055/94‑1 (MQ=60)
                       ATGGTTTTCAATCGATGACCGCACTTTTCACCCTACAAATAACGGGCCAGCGTCGTGATGACGTGGCC‑TTCATTTTTGATAAATGTTCGACGCA                                                                       >  SRR4302545.7458100/1‑94 (MQ=60)
                         GGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATA                                                                     <  SRR4302545.1326256/94‑1 (MQ=60)
                         GGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATA                                                                     <  SRR4302545.810067/94‑1 (MQ=60)
                          GTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAA                                                                    >  SRR4302545.6098653/1‑94 (MQ=60)
                          GTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAA                                                                    >  SRR4302545.1568752/1‑94 (MQ=60)
                          GTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAA                                                                    <  SRR4302545.6874313/94‑1 (MQ=60)
                          GTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAA                                                                    <  SRR4302545.5647676/94‑1 (MQ=60)
                          GTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAA                                                                    <  SRR4302545.5336433/94‑1 (MQ=60)
                            TTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATA                                                                  <  SRR4302545.627140/94‑1 (MQ=60)
                            TTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATA                                                                  >  SRR4302545.1077549/1‑94 (MQ=60)
                            TTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATA                                                                  <  SRR4302545.784836/94‑1 (MQ=60)
                            TTTCAATCGATTACCGCACTTTGCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATA                                                                  <  SRR4302545.4050714/94‑1 (MQ=60)
                             TTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAA                                                                 >  SRR4302545.6020941/1‑94 (MQ=60)
                             TTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAA                                                                 >  SRR4302545.5064717/1‑94 (MQ=60)
                             TTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAA                                                                 >  SRR4302545.10080599/1‑94 (MQ=60)
                              TCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAA                                                                <  SRR4302545.696966/94‑1 (MQ=60)
                               CAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAAT                                                               <  SRR4302545.5523074/94‑1 (MQ=60)
                                CATCGATTACCGCACTTTTCACCCAACAAATAACGGTCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATT                                                              <  SRR4302545.2572986/94‑1 (MQ=60)
                                AATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATT                                                              <  SRR4302545.8683860/94‑1 (MQ=60)
                                AATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATT                                                              <  SRR4302545.10487749/94‑1 (MQ=60)
                                AATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATT                                                              <  SRR4302545.9396352/94‑1 (MQ=60)
                                 ATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTT                                                             >  SRR4302545.5716027/1‑94 (MQ=60)
                                 ATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTT                                                             >  SRR4302545.10623591/1‑94 (MQ=60)
                                  TCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTT                                                            <  SRR4302545.7610091/94‑1 (MQ=60)
                                  TCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTT                                                            <  SRR4302545.9562281/94‑1 (MQ=60)
                                   CGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTT                                                           >  SRR4302545.8230271/1‑94 (MQ=60)
                                   CGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTC                                                           >  SRR4302545.4766283/1‑94 (MQ=60)
                                   CGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTC                                                           >  SRR4302545.5988896/1‑94 (MQ=60)
                                   CGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTC                                                           >  SRR4302545.6356977/1‑94 (MQ=60)
                                   CGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTC                                                           <  SRR4302545.789499/94‑1 (MQ=60)
                                    GATTACCGCCCTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCA                                                          <  SRR4302545.4012342/94‑1 (MQ=60)
                                    GATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCA                                                          >  SRR4302545.10150106/1‑94 (MQ=60)
                                    GATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCA                                                          >  SRR4302545.7993798/1‑94 (MQ=60)
                                     ATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAG                                                         >  SRR4302545.8790375/1‑94 (MQ=60)
                                     ATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAG                                                         <  SRR4302545.3651577/94‑1 (MQ=60)
                                       gtcatCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTA                                                       >  SRR4302545.1984787/6‑94 (MQ=60)
                                       TACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTA                                                       >  SRR4302545.4672959/1‑94 (MQ=60)
                                       TACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTA                                                       >  SRR4302545.8885905/1‑94 (MQ=60)
                                       TACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTA                                                       <  SRR4302545.9532220/94‑1 (MQ=60)
                                       TACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTA                                                       >  SRR4302545.3566896/1‑94 (MQ=60)
                                       TACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGGGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTA                                                       >  SRR4302545.2704622/1‑94 (MQ=60)
                                        TCCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAA                                                      <  SRR4302545.10036951/94‑1 (MQ=60)
                                        ACCGCACTTTTCACCCAACAAATACCGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAA                                                      <  SRR4302545.8777997/94‑1 (MQ=60)
                                        ACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTTAGTAA                                                      >  SRR4302545.9571044/1‑94 (MQ=60)
                                        ACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAA                                                      >  SRR4302545.10708374/1‑94 (MQ=60)
                                        ACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAA                                                      <  SRR4302545.6264837/94‑1 (MQ=60)
                                        ACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTCTTGATAAACGTTCGACGCATCATACATTTTCAGTAA                                                      >  SRR4302545.6228706/1‑94 (MQ=60)
                                         CCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAA                                                     <  SRR4302545.894907/94‑1 (MQ=60)
                                         CCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAA                                                     <  SRR4302545.6524244/94‑1 (MQ=60)
                                         CCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAA                                                     <  SRR4302545.8557203/94‑1 (MQ=60)
                                          CGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAT                                                    <  SRR4302545.5603778/94‑1 (MQ=60)
                                          CGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAT                                                    <  SRR4302545.6815195/94‑1 (MQ=60)
                                          CGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAT                                                    <  SRR4302545.7668670/94‑1 (MQ=60)
                                          CGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAT                                                    <  SRR4302545.4944349/94‑1 (MQ=60)
                                          CGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAT                                                    <  SRR4302545.7426993/94‑1 (MQ=60)
                                           GCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATT                                                   <  SRR4302545.5249732/94‑1 (MQ=60)
                                           GCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATT                                                   <  SRR4302545.8149373/94‑1 (MQ=60)
                                            CACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTG                                                  >  SRR4302545.5268767/1‑94 (MQ=60)
                                            CACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTG                                                  <  SRR4302545.7068095/94‑1 (MQ=60)
                                            CACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTG                                                  <  SRR4302545.5801566/94‑1 (MQ=60)
                                            CACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTG                                                  <  SRR4302545.6769113/94‑1 (MQ=60)
                                             ACTTGACACCCACCAAATACCGGGACAGCGTCGTGATGACGACGCC‑TTCTTTGTTGATAAACGTTCGACTCATAATAAATTTTCAGTAAATTGA                                                 <  SRR4302545.4095263/94‑1 (MQ=60)
                                              CTTTTCACCCAACAAACAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAA                                                >  SRR4302545.7065232/1‑94 (MQ=60)
                                               TTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAAT                                               >  SRR4302545.10445671/1‑94 (MQ=60)
                                                ttccgCCCAACAAATAACGGTCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATA                                              <  SRR4302545.6137790/89‑1 (MQ=60)
                                                TTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATA                                              >  SRR4302545.8470316/1‑94 (MQ=60)
                                                TTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATA                                              <  SRR4302545.5820475/94‑1 (MQ=60)
                                                TTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATA                                              >  SRR4302545.9921427/1‑94 (MQ=60)
                                                 TTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATAT                                             <  SRR4302545.8018945/94‑1 (MQ=60)
                                                  TCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATT                                            >  SRR4302545.2853523/1‑94 (MQ=60)
                                                   CACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTT                                           <  SRR4302545.4115942/94‑1 (MQ=60)
                                                   CACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTT                                           <  SRR4302545.870550/94‑1 (MQ=60)
                                                   CACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTT                                           <  SRR4302545.9124263/94‑1 (MQ=60)
                                                     CCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTAT                                         <  SRR4302545.3651976/94‑1 (MQ=60)
                                                     CCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTAT                                         <  SRR4302545.8835541/94‑1 (MQ=60)
                                                      CCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATA                                        <  SRR4302545.7237491/94‑1 (MQ=60)
                                                      CCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATA                                        <  SRR4302545.6037701/94‑1 (MQ=60)
                                                      CCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATA                                        >  SRR4302545.6670634/1‑94 (MQ=60)
                                                       CAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATAT                                       >  SRR4302545.7446570/1‑94 (MQ=60)
                                                       CAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATAT                                       <  SRR4302545.8940373/94‑1 (MQ=60)
                                                       CAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATAT                                       <  SRR4302545.3202900/94‑1 (MQ=60)
                                                        AACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATTAACGTTCGACGCATAATAAATTTTCCGTAAATTGAATATTTATATC                                      >  SRR4302545.6300753/1‑94 (MQ=60)
                                                        AACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATT                                      >  SRR4302545.2313931/1‑94 (MQ=60)
                                                        AACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATC                                      >  SRR4302545.1174124/1‑94 (MQ=60)
                                                        AACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATC                                      >  SRR4302545.10913575/1‑94 (MQ=60)
                                                         ACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCT                                     <  SRR4302545.3779960/94‑1 (MQ=60)
                                                         ACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCT                                     <  SRR4302545.8184869/94‑1 (MQ=60)
                                                          CAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTT                                    >  SRR4302545.9314711/1‑94 (MQ=60)
                                                           AAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTC                                   >  SRR4302545.10580728/1‑94 (MQ=60)
                                                           AAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTC                                   >  SRR4302545.1626927/1‑94 (MQ=60)
                                                            AATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCA                                  <  SRR4302545.4534017/94‑1 (MQ=60)
                                                            AATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCA                                  <  SRR4302545.10666223/94‑1 (MQ=60)
                                                             ATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAG                                 <  SRR4302545.2350076/94‑1 (MQ=60)
                                                             ATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAG                                 <  SRR4302545.769570/94‑1 (MQ=60)
                                                              TCACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGG                                <  SRR4302545.9878634/94‑1 (MQ=60)
                                                              TAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATAATTATATCTTTAGG                                >  SRR4302545.7324/1‑94 (MQ=60)
                                                              AAACGGGACAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGG                                <  SRR4302545.8319635/94‑1 (MQ=60)
                                                               AACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGA                               >  SRR4302545.834801/1‑94 (MQ=60)
                                                               AACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGA                               <  SRR4302545.1847017/94‑1 (MQ=60)
                                                                ACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAA                              <  SRR4302545.5949408/94‑1 (MQ=60)
                                                                ACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAA                              <  SRR4302545.8202592/94‑1 (MQ=60)
                                                                ACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAA                              <  SRR4302545.3310852/94‑1 (MQ=60)
                                                                 CGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAAT                             <  SRR4302545.651926/94‑1 (MQ=60)
                                                                 CGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAAT                             <  SRR4302545.8641740/94‑1 (MQ=60)
                                                                   GGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTT                           <  SRR4302545.5169425/94‑1 (MQ=60)
                                                                   GGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTT                           <  SRR4302545.7485230/94‑1 (MQ=60)
                                                                   GGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAAAGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTTTATCTTCAGGAATTT                           >  SRR4302545.415983/1‑94 (MQ=60)
                                                                    GCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTG                          <  SRR4302545.5293830/94‑1 (MQ=60)
                                                                     CCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGA                         <  SRR4302545.3535594/94‑1 (MQ=60)
                                                                      CAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAA                        >  SRR4302545.2782477/1‑94 (MQ=60)
                                                                       AGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAG                       >  SRR4302545.1557328/1‑94 (MQ=60)
                                                                       AGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAG                       >  SRR4302545.968636/1‑94 (MQ=60)
                                                                       AGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAG                       >  SRR4302545.971952/1‑94 (MQ=60)
                                                                       AGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAG                       >  SRR4302545.3788853/1‑94 (MQ=60)
                                                                        GCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGA                      <  SRR4302545.9104841/94‑1 (MQ=60)
                                                                        GCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGA                      <  SRR4302545.1445785/94‑1 (MQ=60)
                                                                        GCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGA                      <  SRR4302545.2938534/94‑1 (MQ=60)
                                                                        GCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGA                      <  SRR4302545.8668310/94‑1 (MQ=60)
                                                                         CGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGAT                     <  SRR4302545.5119137/94‑1 (MQ=60)
                                                                         CGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGAT                     >  SRR4302545.1598024/1‑94 (MQ=60)
                                                                          GTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATA                    >  SRR4302545.7630012/1‑94 (MQ=60)
                                                                          GTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATA                    >  SRR4302545.3258848/1‑94 (MQ=60)
                                                                          GTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATA                    >  SRR4302545.2537610/1‑94 (MQ=60)
                                                                            CGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAG                  <  SRR4302545.5903197/94‑1 (MQ=60)
                                                                            CGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAG                  <  SRR4302545.10338958/94‑1 (MQ=60)
                                                                             GTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGG                 >  SRR4302545.1527883/1‑94 (MQ=60)
                                                                             GTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGG                 >  SRR4302545.2276070/1‑94 (MQ=60)
                                                                              TGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGC                >  SRR4302545.2499828/1‑94 (MQ=60)
                                                                               GATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCG               <  SRR4302545.302153/94‑1 (MQ=60)
                                                                                ATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGACTTTGAAGATAAGGCGC              >  SRR4302545.3847025/1‑94 (MQ=60)
                                                                                ATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGC              >  SRR4302545.6385155/1‑94 (MQ=60)
                                                                                ATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGC              >  SRR4302545.10053031/1‑94 (MQ=60)
                                                                                 TGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCA             >  SRR4302545.9504638/1‑94 (MQ=60)
                                                                                 TGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCA             >  SRR4302545.8365880/1‑94 (MQ=60)
                                                                                  GACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAA            <  SRR4302545.4308966/94‑1 (MQ=60)
                                                                                    CGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACA          >  SRR4302545.5757654/1‑94 (MQ=60)
                                                                                    CGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACA          >  SRR4302545.3443945/1‑94 (MQ=60)
                                                                                     GACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAG         <  SRR4302545.10878483/94‑1 (MQ=60)
                                                                                     GACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAG         >  SRR4302545.2057456/1‑94 (MQ=60)
                                                                                     GACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAG         >  SRR4302545.858624/1‑94 (MQ=60)
                                                                                      ACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGC        <  SRR4302545.6939302/94‑1 (MQ=60)
                                                                                      ACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGC        >  SRR4302545.3392652/1‑94 (MQ=60)
                                                                                       CGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCG       >  SRR4302545.1762058/1‑94 (MQ=60)
                                                                                        GCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGA      <  SRR4302545.4762013/94‑1 (MQ=60)
                                                                                        GCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGA      >  SRR4302545.6399047/1‑94 (MQ=60)
                                                                                        GCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGA      >  SRR4302545.7107467/1‑94 (MQ=60)
                                                                                          CCTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAG     >  SRR4302545.5431373/1‑94 (MQ=60)
                                                                                          CCTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAG     >  SRR4302545.454017/1‑94 (MQ=60)
                                                                                          CCTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAG     >  SRR4302545.3400658/1‑94 (MQ=60)
                                                                                          CCTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAG     <  SRR4302545.10468202/94‑1 (MQ=60)
                                                                                           CTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGA    >  SRR4302545.1486082/1‑94 (MQ=60)
                                                                                            TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGAT   >  SRR4302545.6119460/1‑94 (MQ=60)
                                                                                            TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGAT   <  SRR4302545.4342492/94‑1 (MQ=60)
                                                                                             TCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCCTCAGGAATTTGAAGATAAGGCGCAACAGCGAGATG  <  SRR4302545.6871563/94‑1 (MQ=60)
                                                                                             |                                                                                             
GGCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCCTTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGATG  >  NC_000913/3509865‑3510051

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑