Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,941,734 A→G noncoding (409/2906 nt) rrlC → 23S ribosomal RNA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,941,7340AG98.7% 1238.1 / 8.4 465noncoding (409/2906 nt)rrlC23S ribosomal RNA
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (249/210);  minor base . (1/5);  total (250/215)
Fisher's exact test for biased strand distribution p-value = 1.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.47e-01

Only 100 of 505 total aligned reads displayed.

CGATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGAGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAGG  >  NC_000913/3941643‑3941820
                                                                                            |                                                                                      
cgATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑gggggg                                                                                      <  1:9903244/94‑1 (MQ=18)
cgATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑gggggg                                                                                      >  2:338499/1‑94 (MQ=25)
  aTACGGGGTGACAGCCCCGGACACAAAAATGCACATATGGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑gggggggg                                                                                    <  2:5250569/94‑2 (MQ=11)
  aTACAGGGTGACAGCCCCGTACACAAAAATGCTCATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑gggggggg                                                                                    <  1:2062703/94‑2 (MQ=255)
  aTACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑gggggggg                                                                                    >  1:5238390/1‑93 (MQ=25)
  aTACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑gggggggg                                                                                    <  2:4473481/94‑2 (MQ=21)
  aTACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑gggggggg                                                                                    <  1:2764053/94‑2 (MQ=21)
    aCAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑gggggggggc                                                                                  >  2:8710753/1‑91 (MQ=255)
    aCAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGcc                                                                                  >  1:910101/1‑94 (MQ=255)
      aGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCAt                                                                                >  1:742840/1‑94 (MQ=255)
      aGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCAt                                                                                >  2:8355636/1‑94 (MQ=255)
         gTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCAtcct                                                                             <  2:2421486/94‑1 (MQ=255)
          tGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCAtcctc                                                                            >  2:1321535/1‑94 (MQ=255)
            aCAGGCCCGTACACAAAAATGCACATATTTGGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCa                                                                          <  2:4827551/94‑1 (MQ=14)
            aCAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCa                                                                          <  1:799460/94‑1 (MQ=255)
             cAGCCCCGTACACAAAAATGCTCATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCGCCaa                                                                         <  2:3683191/94‑1 (MQ=14)
             cAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCaa                                                                         >  1:3577139/1‑94 (MQ=255)
              aGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAg                                                                        <  2:10466584/94‑1 (MQ=255)
              aGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAg                                                                        <  1:7220691/94‑1 (MQ=255)
                ccccGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGc                                                                      >  2:782247/1‑94 (MQ=255)
                 cccGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGCATAT‑GGGGGGGGCCATCCTCCCAGGCt                                                                     >  1:7895492/1‑94 (MQ=14)
                 cccGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCt                                                                     >  1:4056383/1‑94 (MQ=255)
                 cccGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCt                                                                     >  1:9790685/1‑94 (MQ=255)
                  ccGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGGGCCATCCTCCAAGGCt                                                                     >  2:4921336/1‑94 (MQ=14)
                  ccGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTa                                                                    <  2:3933272/94‑1 (MQ=255)
                  ccGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTa                                                                    <  1:6787990/94‑1 (MQ=255)
                    gTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTaaa                                                                  <  1:1194149/94‑1 (MQ=255)
                    gTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTaaa                                                                  >  1:6245909/1‑94 (MQ=255)
                    gTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTaaa                                                                  <  1:1599559/94‑1 (MQ=255)
                    gTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTaaa                                                                  >  2:351633/1‑94 (MQ=255)
                    gTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTaaa                                                                  <  1:256643/94‑1 (MQ=255)
                    gTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGATaaa                                                                  >  2:6574949/1‑94 (MQ=255)
                     tACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAAt                                                                 <  1:1552707/94‑1 (MQ=255)
                       cacaAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATAc                                                               <  2:5357866/94‑1 (MQ=255)
                       cacaAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATAc                                                               <  2:2962151/94‑1 (MQ=255)
                        acaAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACt                                                              <  2:5480900/94‑1 (MQ=255)
                        acaAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACt                                                              <  2:4193002/94‑1 (MQ=255)
                         caAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGGGCCATCCTCCAAGGCTAAATACt                                                              <  2:5981328/94‑1 (MQ=11)
                          aaaaaTGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTcc                                                            >  1:333289/1‑94 (MQ=255)
                          aaaaaTGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTcc                                                            <  1:317493/94‑1 (MQ=255)
                            aaaTGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCctg                                                          >  1:8145781/1‑94 (MQ=255)
                            aaaTGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCctg                                                          <  1:8315950/94‑1 (MQ=255)
                            aaaTGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCctg                                                          >  2:6882875/1‑94 (MQ=255)
                            aaaTGCACATATTGTGAGCTCAATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCctg                                                          <  2:907029/94‑1 (MQ=14)
                              aTGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCctgac                                                        >  2:3179658/1‑94 (MQ=255)
                               tGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCctgact                                                       <  1:613668/94‑1 (MQ=255)
                               tGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGG‑GGGGCCATCCTCCAAGGCTAAATACTCctgactg                                                      <  1:6465164/94‑1 (MQ=255)
                                 cacaTATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCctgactga                                                     >  2:5138671/1‑94 (MQ=255)
                                  acaTATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCtgactgac                                                    >  1:7724647/1‑94 (MQ=255)
                                  acaTATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCtgactgac                                                    >  2:6823194/1‑94 (MQ=255)
                                      atTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGAt                                                <  2:188396/94‑1 (MQ=255)
                                      atTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGAt                                                >  1:2799814/1‑94 (MQ=255)
                                       ttGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATa                                               >  2:7114655/1‑94 (MQ=255)
                                        tgtgAGTGCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAg                                              <  1:963696/94‑1 (MQ=11)
                                         gtgAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTTCTGACTGACCGATAGt                                             >  2:6331372/1‑94 (MQ=255)
                                         gtgAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGt                                             >  1:9335359/1‑94 (MQ=16)
                                         gtgAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGt                                             <  1:5387041/94‑1 (MQ=16)
                                           gAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGa                                           >  2:10596954/1‑94 (MQ=16)
                                            aGCTCGATGAGTAGGGCGGGTCACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGaa                                          <  1:5886164/94‑1 (MQ=255)
                                            aGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGac                                          >  1:1744838/1‑93 (MQ=255)
                                             gCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAAc                                         <  1:10215895/94‑1 (MQ=12)
                                                 gATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAga                                     >  1:3793870/1‑93 (MQ=255)
                                                 gATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGt                                     >  2:9687312/1‑94 (MQ=16)
                                                  aTGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGtc                                    >  2:7252707/1‑93 (MQ=255)
                                                     aGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCg                                 <  2:7672973/94‑1 (MQ=12)
                                                     aGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCg                                 <  1:9822078/94‑1 (MQ=16)
                                                       tAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTg                               <  1:4390855/94‑1 (MQ=12)
                                                       tAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTg                               <  2:4057900/94‑1 (MQ=16)
                                                        aGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGa                              <  2:9483283/94‑1 (MQ=255)
                                                           gCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAggg                           <  2:8989593/94‑1 (MQ=16)
                                                           gCGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAggg                           <  1:4144556/94‑1 (MQ=16)
                                                            cGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGa                          >  2:5713072/1‑94 (MQ=16)
                                                            cGGGACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGa                          >  1:5639211/1‑94 (MQ=16)
                                                             gggACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGaa                         >  2:5586549/1‑94 (MQ=12)
                                                              ggACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGaaa                        >  2:8593513/1‑94 (MQ=12)
                                                               gACACGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAg                       <  1:5051361/94‑1 (MQ=16)
                                                                 cacGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGc                     <  1:10591058/94‑1 (MQ=16)
                                                                  acGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCg                    >  2:9229585/1‑94 (MQ=12)
                                                                   cGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGa                   >  2:1607552/1‑94 (MQ=12)
                                                                   cGTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGa                   >  2:1954412/1‑94 (MQ=12)
                                                                    gcggTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGaa                  >  2:7918911/3‑94 (MQ=255)
                                                                    gTGGTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGaa                  >  1:2955262/1‑94 (MQ=12)
                                                                      ggTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGaaaa                >  2:2601539/1‑94 (MQ=12)
                                                                      ggTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGaaaa                >  2:6246185/1‑94 (MQ=12)
                                                                      ggTATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGaaaa                >  2:2087805/1‑94 (MQ=12)
                                                                        tATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGa              <  2:6044828/94‑1 (MQ=16)
                                                                        tATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGa              <  1:878688/94‑1 (MQ=16)
                                                                        tATCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGa              >  1:2249849/1‑94 (MQ=12)
                                                                         aTCCTGTCTGCATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGaa             >  1:10069862/1‑94 (MQ=255)
                                                                         aTCCTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGaa             >  1:7091582/1‑94 (MQ=12)
                                                                           ccTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATCCTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAAcc           <  1:577366/94‑1 (MQ=255)
                                                                            cTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAAccc          <  1:1454948/94‑1 (MQ=16)
                                                                            cTGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAAccc          >  1:4782218/1‑94 (MQ=16)
                                                                             tGTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGACCCAGTACCGTGAGGGAAAGGCGAAAAGAAcccc         >  2:10213543/1‑94 (MQ=11)
                                                                              gTCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCg        <  2:2850858/94‑1 (MQ=16)
                                                                               tCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCgg       <  2:7472553/94‑1 (MQ=16)
                                                                               tCTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCgg       <  1:3657002/94‑1 (MQ=16)
                                                                                cTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGc      <  2:8118783/94‑1 (MQ=16)
                                                                                cTGAATAT‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGc      >  1:8541726/1‑94 (MQ=12)
                                                                                    atat‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAgg  >  1:6569390/1‑94 (MQ=9)
                                                                                            |                                                                                      
CGATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑GGGAGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAGG  >  NC_000913/3941643‑3941820

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 244 total aligned reads displayed.
TACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGAGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAGGGGAGTGAAAAA  >  NC_000913/3941646‑3941831
                                                                                              |                                                                                             
TACAGGGGGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGC                                                                                              <  SRR4302545.7724176/94‑1 (MQ=9)
 ACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCC                                                                                             >  SRR4302545.8737967/1‑94 (MQ=9)
   AGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCAT                                                                                           >  SRR4302545.10791299/1‑94 (MQ=9)
   AGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCAT                                                                                           <  SRR4302545.6330484/94‑1 (MQ=9)
   AGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCAT                                                                                           >  SRR4302545.1697186/1‑94 (MQ=9)
   AGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCAT                                                                                           >  SRR4302545.759533/1‑94 (MQ=9)
    GGGTGACAGCCCCGTACACAACAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGG‑GGGACCATCC                                                                                         <  SRR4302545.3857465/94‑1 (MQ=0)
    GGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATC                                                                                          >  SRR4302545.6381842/1‑94 (MQ=9)
    GGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATC                                                                                          >  SRR4302545.5302129/1‑94 (MQ=9)
      gtcacaacccgaTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGCGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCT                                                                                        <  SRR4302545.4486870/82‑1 (MQ=22)
        GACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGTCATCCTCC                                                                                      >  SRR4302545.10096340/1‑94 (MQ=8)
        GACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCC                                                                                      >  SRR4302545.10096339/1‑94 (MQ=26)
         ACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCA                                                                                     >  SRR4302545.3846645/1‑94 (MQ=29)
         ACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCA                                                                                     <  SRR4302545.817424/94‑1 (MQ=29)
         ACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCA                                                                                     >  SRR4302545.7983626/1‑94 (MQ=29)
         ACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCA                                                                                     <  SRR4302545.4857899/94‑1 (MQ=29)
         ACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCA                                                                                     <  SRR4302545.7251009/94‑1 (MQ=29)
         ACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCA                                                                                     <  SRR4302545.3348493/94‑1 (MQ=29)
          CAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGGGGCCATCCTCC                                                                                      <  SRR4302545.6033809/94‑1 (MQ=8)
          CAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAA                                                                                    >  SRR4302545.642763/1‑94 (MQ=31)
          CAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAA                                                                                    <  SRR4302545.1988599/94‑1 (MQ=31)
          CAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAA                                                                                    >  SRR4302545.3664468/1‑94 (MQ=31)
          CAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAA                                                                                    >  SRR4302545.1620301/1‑94 (MQ=31)
           AGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAG                                                                                   >  SRR4302545.8133121/1‑94 (MQ=31)
           AGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAG                                                                                   <  SRR4302545.7422098/94‑1 (MQ=31)
           AGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAG                                                                                   <  SRR4302545.5700778/94‑1 (MQ=31)
            GCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGG                                                                                  <  SRR4302545.5227376/94‑1 (MQ=31)
            GCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGG                                                                                  >  SRR4302545.5393186/1‑94 (MQ=31)
             CCCCGTACACAAAAATGCTCATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGC                                                                                 <  SRR4302545.6154256/94‑1 (MQ=30)
             CCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATG‑GGGGGGGGCCATCCTCCAAGG                                                                                  <  SRR4302545.7306152/94‑1 (MQ=8)
             CCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGC                                                                                 >  SRR4302545.4469948/1‑94 (MQ=31)
              CCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGCATAT‑‑GGGGGGGGCCATCCTCCCAGGCT                                                                                >  SRR4302545.8119586/1‑94 (MQ=26)
              CCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCT                                                                                >  SRR4302545.10081699/1‑94 (MQ=31)
              CCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCT                                                                                >  SRR4302545.3985492/1‑94 (MQ=31)
              CCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCT                                                                                >  SRR4302545.4157954/1‑94 (MQ=31)
              CCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCT                                                                                >  SRR4302545.10081700/1‑94 (MQ=31)
               CCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATG‑GGGGGGGGCCATCCTCCAAGGCT                                                                                <  SRR4302545.9642144/94‑1 (MQ=8)
               CCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTA                                                                               <  SRR4302545.6974279/94‑1 (MQ=31)
               CCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTA                                                                               >  SRR4302545.10112030/1‑94 (MQ=31)
                CGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAA                                                                              >  SRR4302545.1573234/1‑94 (MQ=31)
                CGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAA                                                                              <  SRR4302545.9256430/94‑1 (MQ=31)
                CGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAA                                                                              >  SRR4302545.5419696/1‑94 (MQ=31)
                 GTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAA                                                                             >  SRR4302545.10432665/1‑94 (MQ=31)
                 GTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAA                                                                             >  SRR4302545.10488002/1‑94 (MQ=31)
                 GTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAA                                                                             <  SRR4302545.261929/94‑1 (MQ=31)
                 GTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAA                                                                             >  SRR4302545.6416142/1‑94 (MQ=31)
                 GTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAA                                                                             >  SRR4302545.8936363/1‑94 (MQ=31)
                 GTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAA                                                                             <  SRR4302545.1220838/94‑1 (MQ=31)
                 GTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAA                                                                             <  SRR4302545.1637464/94‑1 (MQ=31)
                  TACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATG‑GGGGGGGGCCATCCTCCAAGGCTAAA                                                                             >  SRR4302545.1083799/1‑94 (MQ=8)
                  TACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAAT                                                                            >  SRR4302545.1207015/1‑94 (MQ=31)
                  TACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAAT                                                                            <  SRR4302545.6629252/94‑1 (MQ=31)
                  TACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAAT                                                                            <  SRR4302545.1589217/94‑1 (MQ=31)
                   ACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATA                                                                           >  SRR4302545.2881437/1‑94 (MQ=31)
                   ACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATA                                                                           >  SRR4302545.10173597/1‑94 (MQ=31)
                   ACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATA                                                                           <  SRR4302545.6000949/94‑1 (MQ=31)
                   ACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATA                                                                           <  SRR4302545.158993/94‑1 (MQ=31)
                   ACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATA                                                                           >  SRR4302545.2748503/1‑94 (MQ=31)
                   ACACAAAAATGCACATATTGTGAGCTAGATGAGTAGGGCGGGACAGGTGGTATCCGGTGTGAATAT‑‑GGGGGTGGCCATCCTCCAAGGCTAAATA                                                                           <  SRR4302545.6801451/94‑1 (MQ=15)
                    CACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATAC                                                                          <  SRR4302545.5100050/94‑1 (MQ=31)
                    CACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATAC                                                                          >  SRR4302545.2776405/1‑94 (MQ=31)
                    CACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGCACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATAC                                                                          <  SRR4302545.3872091/94‑1 (MQ=30)
                     ACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATG‑GGGGGGGGCCATCCTCCAAGGCTATATAC                                                                          >  SRR4302545.5952023/1‑94 (MQ=7)
                     ACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACT                                                                         >  SRR4302545.8126209/1‑94 (MQ=31)
                     ACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACT                                                                         >  SRR4302545.8370507/1‑94 (MQ=31)
                     ACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACT                                                                         <  SRR4302545.6927446/94‑1 (MQ=31)
                      CAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATG‑GGGGGGGGCCATCCTCCAAGGCTAAATACT                                                                         >  SRR4302545.10908026/1‑94 (MQ=8)
                       AAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCC                                                                       <  SRR4302545.324218/94‑1 (MQ=31)
                        AAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCT                                                                      >  SRR4302545.2139075/1‑94 (MQ=31)
                        AAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCT                                                                      >  SRR4302545.657704/1‑94 (MQ=31)
                        AAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCT                                                                      <  SRR4302545.419398/94‑1 (MQ=31)
                        AAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCT                                                                      <  SRR4302545.3309500/94‑1 (MQ=31)
                         AAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATTCTCCTG                                                                     >  SRR4302545.6315605/1‑94 (MQ=30)
                         AAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTG                                                                     <  SRR4302545.4949918/94‑1 (MQ=31)
                         AAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTG                                                                     >  SRR4302545.3725098/1‑94 (MQ=31)
                         AAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTG                                                                     >  SRR4302545.5800357/1‑94 (MQ=31)
                         AAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTG                                                                     <  SRR4302545.8556944/94‑1 (MQ=31)
                         AAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTG                                                                     >  SRR4302545.8381145/1‑94 (MQ=31)
                          AATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGA                                                                    >  SRR4302545.6185793/1‑94 (MQ=31)
                            TGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACT                                                                  <  SRR4302545.3184119/94‑1 (MQ=29)
                            TGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACT                                                                  <  SRR4302545.421034/94‑1 (MQ=29)
                            TGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACT                                                                  <  SRR4302545.2081603/94‑1 (MQ=29)
                            TGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGG‑GGGGCCATCCTCCAAGGCTAAATACTCCTGACTG                                                                 <  SRR4302545.6641927/94‑1 (MQ=0)
                             GCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTG                                                                 >  SRR4302545.545033/1‑94 (MQ=26)
                              CACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGA                                                                <  SRR4302545.10292126/94‑1 (MQ=24)
                              CACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGA                                                                >  SRR4302545.6205122/1‑94 (MQ=24)
                               ACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATG‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGA                                                                >  SRR4302545.9406267/1‑94 (MQ=0)
                                CATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATG‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGAC                                                               <  SRR4302545.9417716/94‑1 (MQ=0)
                                CATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACC                                                              >  SRR4302545.3194277/1‑94 (MQ=19)
                                CATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACC                                                              >  SRR4302545.756453/1‑94 (MQ=19)
                                CATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACC                                                              <  SRR4302545.1563234/94‑1 (MQ=19)
                                CATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACC                                                              >  SRR4302545.1295544/1‑94 (MQ=19)
                                CATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACC                                                              <  SRR4302545.5779849/94‑1 (MQ=19)
                                 ATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCG                                                             >  SRR4302545.8527180/1‑94 (MQ=9)
                                   ATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGAT                                                           >  SRR4302545.372496/1‑94 (MQ=4)
                                   ATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGAT                                                           >  SRR4302545.2867527/1‑94 (MQ=4)
                                   ATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGAT                                                           <  SRR4302545.3034921/94‑1 (MQ=4)
                                   ATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGCATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGAT                                                           >  SRR4302545.2867526/1‑94 (MQ=4)
                                    TTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATA                                                          <  SRR4302545.9952808/94‑1 (MQ=2)
                                    TTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATA                                                          >  SRR4302545.7009613/1‑94 (MQ=2)
                                    TTGTGAGCTCGATGAGTAGGGCGCGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATA                                                          <  SRR4302545.5993020/94‑1 (MQ=1)
                                     TGTGAGTGCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAG                                                         <  SRR4302545.985315/94‑1 (MQ=0)
                                     TGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAG                                                         <  SRR4302545.4585580/94‑1 (MQ=0)
                                     TGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAG                                                         >  SRR4302545.9709433/1‑94 (MQ=0)
                                      GTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCGAGGCTtaaaaatccctcctcttctgcatg                                                        >  SRR4302545.6267036/1‑70 (MQ=0)
                                      GTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGT                                                        <  SRR4302545.5527309/94‑1 (MQ=0)
                                      GTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGT                                                        >  SRR4302545.9609062/1‑94 (MQ=0)
                                      GTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGT                                                        <  SRR4302545.862782/94‑1 (MQ=0)
                                       TGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTCAATGCTCCTGACTGACCGATAGGG                                                       >  SRR4302545.888254/1‑94 (MQ=0)
                                       TGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTG                                                       >  SRR4302545.8351006/1‑94 (MQ=0)
                                         AGCTCGATGAGTAGGGCGGGTCACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAA                                                     <  SRR4302545.6044832/94‑1 (MQ=0)
                                         AGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAC                                                     >  SRR4302545.1786577/1‑94 (MQ=0)
                                         AGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAA                                                     >  SRR4302545.2520397/1‑94 (MQ=0)
                                          GCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAAC                                                    <  SRR4302545.10517627/94‑1 (MQ=0)
                                          GCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAAC                                                    <  SRR4302545.8860721/94‑1 (MQ=0)
                                          GCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAAC                                                    >  SRR4302545.6788506/1‑94 (MQ=0)
                                           CTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACC                                                   >  SRR4302545.4299457/1‑94 (MQ=0)
                                           CTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACC                                                   >  SRR4302545.2489734/1‑94 (MQ=0)
                                           CTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACC                                                   >  SRR4302545.10601144/1‑94 (MQ=0)
                                            TCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCA                                                  <  SRR4302545.4548920/94‑1 (MQ=0)
                                            TCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCA                                                  >  SRR4302545.1866748/1‑94 (MQ=0)
                                             CGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATCGTGAACCAG                                                 >  SRR4302545.10499328/1‑94 (MQ=0)
                                             CGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAG                                                 <  SRR4302545.7383420/94‑1 (MQ=0)
                                              GATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGT                                                >  SRR4302545.1619248/1‑94 (MQ=0)
                                              GATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGT                                                >  SRR4302545.5665744/1‑94 (MQ=0)
                                              GATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGT                                                >  SRR4302545.142096/1‑94 (MQ=0)
                                              GATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGT                                                <  SRR4302545.422601/94‑1 (MQ=0)
                                              GATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGA                                                >  SRR4302545.3887879/1‑94 (MQ=0)
                                              GAGGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCATCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGT                                                <  SRR4302545.1112226/94‑1 (MQ=0)
                                                 GAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGGCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACC                                             >  SRR4302545.7949942/1‑94 (MQ=0)
                                                 GAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACC                                             <  SRR4302545.2297839/94‑1 (MQ=0)
                                                  AGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCG                                            <  SRR4302545.10113919/94‑1 (MQ=0)
                                                  AGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCG                                            >  SRR4302545.3276224/1‑94 (MQ=0)
                                                  AGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCG                                            >  SRR4302545.2948642/1‑94 (MQ=0)
                                                   ctagggttggaaacgaggaATCCTGTCTGAATAT‑‑GGGA‑GGACCTTCCTCCAAGGCTAAGTACTACTGACTGACCGATATCGAACCAGGACCGTG                                          >  SRR4302545.2708593/20‑94 (MQ=36)
                                                    TAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTG                                          <  SRR4302545.4502107/94‑1 (MQ=0)
                                                    TAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTG                                          >  SRR4302545.1682213/1‑94 (MQ=0)
                                                     AGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGA                                         >  SRR4302545.1368773/1‑94 (MQ=0)
                                                     AGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGA                                         >  SRR4302545.7029304/1‑94 (MQ=0)
                                                     AGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGA                                         >  SRR4302545.9110468/1‑94 (MQ=0)
                                                       GGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGG                                       >  SRR4302545.7695012/1‑94 (MQ=0)
                                                       GGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGG                                       >  SRR4302545.3517922/1‑94 (MQ=0)
                                                       GGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGG                                       <  SRR4302545.4169822/94‑1 (MQ=0)
                                                        GCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGG                                      <  SRR4302545.4248098/94‑1 (MQ=0)
                                                        GCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGG                                      >  SRR4302545.9156942/1‑94 (MQ=0)
                                                         CGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGA                                     >  SRR4302545.2841899/1‑94 (MQ=0)
                                                         CGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGGGGGGGA                                     >  SRR4302545.2841898/1‑94 (MQ=0)
                                                         CGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAAACAGTACCGTGAGGGA                                     <  SRR4302545.7468025/94‑1 (MQ=0)
                                                          GGGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAA                                    >  SRR4302545.6645618/1‑94 (MQ=0)
                                                           GGACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAA                                   <  SRR4302545.3447605/94‑1 (MQ=0)
                                                            GACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAG                                  <  SRR4302545.7925518/94‑1 (MQ=0)
                                                            GACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAG                                  <  SRR4302545.5179818/94‑1 (MQ=0)
                                                            GACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAG                                  <  SRR4302545.1765032/94‑1 (MQ=0)
                                                             ACACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGG                                 >  SRR4302545.10168712/1‑94 (MQ=0)
                                                               ACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCG                               >  SRR4302545.7998619/1‑94 (MQ=0)
                                                               ACGTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCG                               <  SRR4302545.187269/94‑1 (MQ=0)
                                                                 GTTGTATCCTTTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAA                             <  SRR4302545.8119887/94‑1 (MQ=0)
                                                                 GTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGGAAGGCGAA                             >  SRR4302545.2567359/1‑94 (MQ=0)
                                                                 GTGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAA                             >  SRR4302545.3027204/1‑94 (MQ=0)
                                                                  TGGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATACTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGaaccctcagggacaagggcaa                            >  SRR4302545.10701939/1‑73 (MQ=0)
                                                                   GGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAA                           >  SRR4302545.7333310/1‑94 (MQ=0)
                                                                   GGTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAA                           <  SRR4302545.10439142/94‑1 (MQ=0)
                                                                    GTATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAG                          <  SRR4302545.3945090/94‑1 (MQ=0)
                                                                     TATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGA                         >  SRR4302545.2304646/1‑94 (MQ=0)
                                                                     TATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGA                         >  SRR4302545.8261044/1‑94 (MQ=0)
                                                                      ATCCTGTCTGCATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAA                        >  SRR4302545.10367830/1‑94 (MQ=0)
                                                                      ATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAA                        >  SRR4302545.10053544/1‑94 (MQ=0)
                                                                      ATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAA                        >  SRR4302545.7287966/1‑94 (MQ=0)
                                                                      ATCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAA                        >  SRR4302545.8993128/1‑94 (MQ=0)
                                                                       TCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAAC                       <  SRR4302545.10179464/94‑1 (MQ=0)
                                                                       TCCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAAC                       >  SRR4302545.3734155/1‑94 (MQ=0)
                                                                        CCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATCCTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACC                      <  SRR4302545.590390/94‑1 (MQ=0)
                                                                        CCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACC                      <  SRR4302545.7995787/94‑1 (MQ=0)
                                                                        CCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACC                      >  SRR4302545.7928457/1‑94 (MQ=0)
                                                                        CCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACC                      <  SRR4302545.3503548/94‑1 (MQ=0)
                                                                        CCTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACC                      >  SRR4302545.6732293/1‑94 (MQ=0)
                                                                         CTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCC                     >  SRR4302545.4904485/1‑94 (MQ=0)
                                                                         CTGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCC                     <  SRR4302545.1488215/94‑1 (MQ=0)
                                                                          TGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCC                    >  SRR4302545.5120700/1‑94 (MQ=0)
                                                                          TGTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCC                    <  SRR4302545.943371/94‑1 (MQ=0)
                                                                           GTCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCG                   >  SRR4302545.58340/1‑94 (MQ=0)
                                                                            TCTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGG                  <  SRR4302545.3746342/94‑1 (MQ=0)
                                                                             CTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGC                 <  SRR4302545.8326880/94‑1 (MQ=0)
                                                                             CTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGC                 >  SRR4302545.8788682/1‑94 (MQ=0)
                                                                             CTGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACACCGGC                 >  SRR4302545.2267929/1‑94 (MQ=0)
                                                                              TGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCG                <  SRR4302545.2790194/94‑1 (MQ=0)
                                                                              TGAATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCG                <  SRR4302545.7488694/94‑1 (MQ=0)
                                                                                AATAT‑‑GGGGGGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAG              >  SRR4302545.5810324/1‑94 (MQ=0)
                                                                                           GGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAGGGGAGTGAA     <  SRR4302545.672066/94‑1 (MQ=0)
                                                                                           GGGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAGGGGAGTGAA     <  SRR4302545.3811152/94‑1 (MQ=0)
                                                                                           GGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAGGGGAGTGAA     >  SRR4302545.9981899/1‑94 (MQ=0)
                                                                                            GGGCCATCCTCCGAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAGGGGAGTGAAA    <  SRR4302545.7145266/94‑1 (MQ=0)
                                                                                            GGGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAGGGGAGTGAAA    <  SRR4302545.8649618/94‑1 (MQ=0)
                                                                                            GGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAGGGGAGTGAAA    <  SRR4302545.10607787/94‑1 (MQ=0)
                                                                                             GGCCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAGGGGAGTGAAAA   >  SRR4302545.3173009/1‑94 (MQ=0)
                                                                                             GACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAGGGGAGTGAAAA   <  SRR4302545.5407881/94‑1 (MQ=0)
                                                                                              ACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAGGGGAGTGAAAAA  >  SRR4302545.3776221/1‑94 (MQ=0)
                                                                                              ACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAGGGGAGTGAAAAA  >  SRR4302545.5744906/1‑94 (MQ=0)
                                                                                              ACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAGGGGAGTGAAAAA  >  SRR4302545.10862512/1‑94 (MQ=0)
                                                                                              ACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACAAGTACCGCGAGGGAAAGGCGAAAAGAACCCCGGCGAGGGGAGTGAAAAA  >  SRR4302545.4481136/1‑94 (MQ=0)
                                                                                              |                                                                                             
TACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATAT‑‑GGGAGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGGCGAAAAGAACCCCGGCGAGGGGAGTGAAAAA  >  NC_000913/3941646‑3941831

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑