Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I2 R1	882	254.4	12957588	98.0%	12698436	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,629,476	T→C	N249D (AAC→GAC)	yhiJ ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,629,476	0	T	C	96.8%	1270.4 / 14.8	379	N249D (AAC→GAC)	yhiJ	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (7/5); new base C (201/166); total (208/171)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 398 total aligned reads displayed.

AATAAGGCTGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTTCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCAAATGTCCCG  >  NC_000913/3629386‑3629568

aaTAAGGCTGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTcct                                                                                            >  2:5904881/1‑93 (MQ=255)

 aTAAGGCTGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTcctc                                                                                           <  1:6237550/93‑1 (MQ=255)

 aTAAGGCTGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTcctc                                                                                           >  1:855685/1‑93 (MQ=255)

  tAAGGCTGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGtcctcc                                                                                          <  2:2737601/93‑1 (MQ=255)

  tAAGGCTGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGtcctcc                                                                                          <  1:5664807/93‑1 (MQ=255)

  tAAGGCTGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGtcctcc                                                                                          >  2:5007561/1‑93 (MQ=255)

  tAAGGCTGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGtcctcc                                                                                          <  1:23191/93‑1 (MQ=255)

  tAAGGCTGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGtcctcc                                                                                          <  2:1097544/93‑1 (MQ=255)

    aGGCTGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCt                                                                                        <  2:5737526/93‑1 (MQ=255)

     ggCTGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCtt                                                                                       >  2:1630962/1‑93 (MQ=255)

     ggCTGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCtt                                                                                       >  2:650836/1‑93 (MQ=255)

         gAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCa                                                                                   >  1:4731325/1‑93 (MQ=255)

         gAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCa                                                                                   >  1:4217999/1‑93 (MQ=255)

         gAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCa                                                                                   <  1:2993113/93‑1 (MQ=255)

          aaGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCaa                                                                                  <  2:4263999/93‑1 (MQ=255)

          aaGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCaa                                                                                  <  1:5313483/93‑1 (MQ=255)

          aaGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCaa                                                                                  <  2:4740911/93‑1 (MQ=255)

            gACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATa                                                                                <  2:2289887/93‑1 (MQ=255)

            gACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATa                                                                                <  1:2213743/93‑1 (MQ=255)

              cTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACg                                                                              <  2:5221525/93‑1 (MQ=255)

                ttCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGtt                                                                            >  2:6024229/1‑93 (MQ=255)

                ttCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGtt                                                                            <  1:1518778/93‑1 (MQ=255)

                  cTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTga                                                                          <  1:5974613/93‑1 (MQ=255)

                    aaaaTAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTgaga                                                                        <  2:5521063/93‑1 (MQ=255)

                     aaaTAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGaa                                                                       >  2:1144566/1‑93 (MQ=255)

                     aaaTAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGaa                                                                       <  1:2724759/93‑1 (MQ=255)

                      aataatGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAAc                                                                      >  1:4036230/1‑93 (MQ=255)

                      aataatGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAAc                                                                      >  2:4551234/1‑93 (MQ=255)

                       ataatGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACt                                                                     >  1:5921918/1‑93 (MQ=255)

                       ataatGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACt                                                                     >  1:4929951/1‑93 (MQ=255)

                       ataatGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACt                                                                     >  2:5805524/1‑93 (MQ=255)

                        taatGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACtt                                                                    >  1:1088902/1‑93 (MQ=255)

                        taatGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACtt                                                                    <  1:5179900/93‑1 (MQ=255)

                        taatGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACtt                                                                    >  1:1288795/1‑93 (MQ=255)

                          atGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCa                                                                  <  1:1933250/93‑1 (MQ=255)

                           tGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCAt                                                                 <  2:4411232/93‑1 (MQ=255)

                           tGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCAt                                                                 <  1:3092989/93‑1 (MQ=255)

                            gTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCAtc                                                                <  1:4590407/93‑1 (MQ=255)

                            gTCTCTTCAGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCAtc                                                                >  2:6318532/1‑93 (MQ=255)

                             tctcTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCAtct                                                               <  2:5786720/93‑1 (MQ=255)

                               tcttctGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCAtcttc                                                             <  1:5433197/93‑1 (MQ=255)

                               tcttctGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCAtcttc                                                             >  1:4136286/1‑93 (MQ=255)

                                cttctGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCAtcttct                                                            >  2:645061/1‑93 (MQ=255)

                                cttctGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCAtcttct                                                            >  2:1413848/1‑93 (MQ=255)

                                 ttctGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCta                                                           >  2:5122428/1‑93 (MQ=255)

                                 ttctGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCta                                                           >  2:3616260/1‑93 (MQ=255)

                                  tctGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCtat                                                          <  2:701075/93‑1 (MQ=255)

                                  tctGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCtat                                                          >  2:2404867/1‑93 (MQ=255)

                                   ctGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCtata                                                         >  2:4155214/1‑93 (MQ=255)

                                    tGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTatat                                                        <  2:5427569/93‑1 (MQ=255)

                                       tCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTaa                                                     <  2:1998785/93‑1 (MQ=255)

                                        cAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAg                                                    <  2:1833720/93‑1 (MQ=255)

                                         aGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGc                                                   <  2:3417753/93‑1 (MQ=255)

                                         aGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGc                                                   >  2:2164223/1‑93 (MQ=255)

                                          ggATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCa                                                  >  2:82841/1‑93 (MQ=255)

                                          ggATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCa                                                  <  1:1764431/93‑1 (MQ=255)

                                             tACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACt                                               >  1:1982867/1‑93 (MQ=255)

                                             tACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACt                                               >  1:4433779/1‑93 (MQ=255)

                                                tGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGc                                            >  2:6414065/1‑93 (MQ=255)

                                                 gATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCt                                           >  2:2951611/1‑93 (MQ=255)

                                                  attattGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTa                                          >  2:3992694/1‑93 (MQ=255)

                                                   ttattGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTaa                                         >  1:2092805/1‑93 (MQ=255)

                                                   ttattGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTaa                                         <  1:3863311/93‑1 (MQ=255)

                                                    tattGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAg                                        >  2:4818857/1‑93 (MQ=255)

                                                    tattGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAg                                        <  1:3549201/93‑1 (MQ=255)

                                                      ttGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGa                                      <  2:751798/93‑1 (MQ=255)

                                                      ttGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGa                                      <  1:5723510/93‑1 (MQ=255)

                                                       tGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTAGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGaa                                     >  1:1220593/1‑93 (MQ=255)

                                                          aTTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAAtt                                  >  2:5082555/1‑93 (MQ=255)

                                                             aaCATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTtc                               >  2:1482981/1‑93 (MQ=255)

                                                              aCATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTtct                              >  2:4900556/1‑93 (MQ=255)

                                                               cATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTtctc                             >  2:3789417/1‑93 (MQ=255)

                                                                aTTAGTGTTAAGTTGCTCATTAAAGCTCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTcc                            >  1:5062602/1‑93 (MQ=255)

                                                                 ttAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCt                           <  1:3390130/93‑1 (MQ=255)

                                                                 ttAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCt                           <  2:4315373/93‑1 (MQ=255)

                                                                 ttAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCt                           >  1:983506/1‑93 (MQ=255)

                                                                  tAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCtt                          >  1:3921499/1‑93 (MQ=255)

                                                                    gtgtTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCa                        <  1:6319791/93‑1 (MQ=255)

                                                                    gtgtTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCa                        >  1:4298598/1‑93 (MQ=255)

                                                                        tAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCa                    >  1:3123715/1‑93 (MQ=255)

                                                                         aaGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCAt                   <  1:2269760/93‑1 (MQ=255)

                                                                         aaGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCAt                   >  1:3219371/1‑93 (MQ=255)

                                                                            ttGCTCATTAAAGTTCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGAt                >  1:734444/1‑93 (MQ=255)

                                                                              gCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTc              <  2:5375718/93‑1 (MQ=255)

                                                                              gCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTc              >  1:619065/1‑93 (MQ=255)

                                                                              gCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTc              >  1:3709788/1‑93 (MQ=255)

                                                                               cTCATTAAAGTTCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTcc             <  1:5525665/93‑1 (MQ=255)

                                                                                tCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTccc            >  2:3861866/1‑93 (MQ=255)

                                                                                 cATTAAAGTTCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCa           >  2:467573/1‑93 (MQ=255)

                                                                                  aTTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCaa          <  2:6176028/93‑1 (MQ=255)

                                                                                   ttAAAGTTCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCaaa         <  2:1550831/93‑1 (MQ=255)

                                                                                   ttAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCaaa         <  2:2656732/93‑1 (MQ=255)

                                                                                   ttAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCaaa         >  2:3720416/1‑93 (MQ=255)

                                                                                    tAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCAAAt        <  1:4653754/93‑1 (MQ=255)

                                                                                    tAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCAAAt        <  1:2442911/93‑1 (MQ=255)

                                                                                    tAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCAAAt        <  2:206973/93‑1 (MQ=255)

                                                                                     aaaGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCAAATg       >  2:6108656/1‑93 (MQ=255)

                                                                                      aaGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCAAATGt      >  1:4989133/1‑93 (MQ=255)

                                                                                       aGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCAAATGTc     >  2:3230972/1‑93 (MQ=255)

                                                                                       aGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCAAATGTc     >  2:5258485/1‑93 (MQ=255)

AATAAGGCTGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTTCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCAAATGTCCCG  >  NC_000913/3629386‑3629568

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TAAATAAGGCTGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTTCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCAAATGTCCCGT  >  NC_000913/3629384‑3629569

TAAATAAGGCTGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCC                                                                                              >  SRR4302537.2618632/1‑94 (MQ=60)

TAAATAAGGCTGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCC                                                                                              >  SRR4302537.4402088/1‑94 (MQ=60)

 AAATAAGGCTGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCT                                                                                             >  SRR4302537.4674783/1‑94 (MQ=60)

 AAATAAGGCTGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCT                                                                                             >  SRR4302537.6271721/1‑94 (MQ=60)

  AATAAGGCTGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTC                                                                                            <  SRR4302537.219065/94‑1 (MQ=60)

  AATAAGGCTGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTC                                                                                            >  SRR4302537.1257549/1‑94 (MQ=60)

  AATAAGGCTGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTC                                                                                            >  SRR4302537.861559/1‑94 (MQ=60)

   ATAAGGCTGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCC                                                                                           <  SRR4302537.6280439/94‑1 (MQ=60)

    TAAGGCTGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCC                                                                                          <  SRR4302537.5703563/94‑1 (MQ=60)

    TAAGGCTGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCC                                                                                          <  SRR4302537.23370/94‑1 (MQ=60)

     AAGGCTGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTTCTCCCT                                                                                         <  SRR4302537.4263726/94‑1 (MQ=60)

     AAGGCTGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCT                                                                                         >  SRR4302537.5331565/1‑94 (MQ=60)

      AGGCTGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTT                                                                                        >  SRR4302537.4145558/1‑94 (MQ=60)

        GCTGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAG                                                                                      <  SRR4302537.5636290/94‑1 (MQ=60)

        GCTGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAG                                                                                      >  SRR4302537.6096434/1‑94 (MQ=60)

         CTGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGC                                                                                     >  SRR4302537.3076429/1‑94 (MQ=60)

          TGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCA                                                                                    >  SRR4302537.4247399/1‑94 (MQ=60)

          TGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCA                                                                                    >  SRR4302537.230377/1‑94 (MQ=60)

          TGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCA                                                                                    >  SRR4302537.4764017/1‑94 (MQ=60)

           GAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAA                                                                                   <  SRR4302537.3013997/94‑1 (MQ=60)

           GAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAA                                                                                   >  SRR4302537.14307/1‑94 (MQ=60)

            AAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAAT                                                                                  <  SRR4302537.5349977/94‑1 (MQ=60)

            AAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAAT                                                                                  >  SRR4302537.6236055/1‑94 (MQ=60)

             AGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATA                                                                                 >  SRR4302537.6165596/1‑94 (MQ=60)

              GACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATAC                                                                                >  SRR4302537.4980515/1‑94 (MQ=60)

              GACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATAC                                                                                >  SRR4302537.506384/1‑94 (MQ=60)

              GACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATAC                                                                                <  SRR4302537.753116/94‑1 (MQ=60)

              GACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATAC                                                                                >  SRR4302537.364410/1‑94 (MQ=60)

              GACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATAC                                                                                <  SRR4302537.2229356/94‑1 (MQ=60)

               ACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACG                                                                               <  SRR4302537.4078563/94‑1 (MQ=60)

               ACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACG                                                                               <  SRR4302537.3420211/94‑1 (MQ=60)

                CTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGT                                                                              <  SRR4302537.1255109/94‑1 (MQ=60)

                CTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGT                                                                              <  SRR4302537.920775/94‑1 (MQ=60)

                CTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGT                                                                              <  SRR4302537.6256727/94‑1 (MQ=60)

                CTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGT                                                                              <  SRR4302537.4970430/94‑1 (MQ=60)

                 TTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTTCTCCCTTAGCAATACGTT                                                                             >  SRR4302537.3503211/1‑94 (MQ=60)

                 TTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTT                                                                             <  SRR4302537.2151185/94‑1 (MQ=60)

                 TTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTT                                                                             >  SRR4302537.4001105/1‑94 (MQ=60)

                 TTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTT                                                                             <  SRR4302537.2376597/94‑1 (MQ=60)

                  TTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTG                                                                            >  SRR4302537.4893294/1‑94 (MQ=60)

                  TTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTG                                                                            <  SRR4302537.1529394/94‑1 (MQ=60)

                  TTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTG                                                                            >  SRR4302537.5528290/1‑94 (MQ=60)

                    CTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAG                                                                          <  SRR4302537.4367600/94‑1 (MQ=60)

                    CTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAG                                                                          <  SRR4302537.5716571/94‑1 (MQ=60)

                    CTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAG                                                                          <  SRR4302537.6015627/94‑1 (MQ=60)

                      AAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAA                                                                        >  SRR4302537.3127299/1‑94 (MQ=60)

                      AAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAA                                                                        >  SRR4302537.2969145/1‑94 (MQ=60)

                      AAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAA                                                                        <  SRR4302537.47494/94‑1 (MQ=60)

                       AAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAAC                                                                       <  SRR4302537.2743790/94‑1 (MQ=60)

                       AAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAAC                                                                       >  SRR4302537.4064478/1‑94 (MQ=60)

                        AATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACT                                                                      >  SRR4302537.5962551/1‑94 (MQ=60)

                        AATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACT                                                                      >  SRR4302537.4881993/1‑94 (MQ=60)

                        AATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACT                                                                      >  SRR4302537.4963934/1‑94 (MQ=60)

                        AATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACT                                                                      >  SRR4302537.5820795/1‑94 (MQ=60)

                        AATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACT                                                                      >  SRR4302537.633105/1‑94 (MQ=60)

                        AATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACT                                                                      <  SRR4302537.150036/94‑1 (MQ=60)

                         ATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTT                                                                     >  SRR4302537.5736345/1‑94 (MQ=60)

                         ATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTT                                                                     >  SRR4302537.1297761/1‑94 (MQ=60)

                         ATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTT                                                                     >  SRR4302537.1993662/1‑94 (MQ=60)

                         ATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTT                                                                     >  SRR4302537.1096425/1‑94 (MQ=60)

                         ATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTT                                                                     >  SRR4302537.2579171/1‑94 (MQ=60)

                          TAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTC                                                                    <  SRR4302537.3071647/94‑1 (MQ=60)

                          TAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTC                                                                    <  SRR4302537.5215546/94‑1 (MQ=60)

                           AATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCA                                                                   >  SRR4302537.5115094/1‑94 (MQ=60)

                            ATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCAT                                                                  <  SRR4302537.1946693/94‑1 (MQ=60)

                             TGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATC                                                                 <  SRR4302537.3114563/94‑1 (MQ=60)

                             TGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATC                                                                 >  SRR4302537.1918015/1‑94 (MQ=60)

                              GTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCT                                                                <  SRR4302537.4622155/94‑1 (MQ=60)

                              GTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCT                                                                <  SRR4302537.532618/94‑1 (MQ=60)

                              GTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCT                                                                <  SRR4302537.471897/94‑1 (MQ=60)

                              GTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCT                                                                >  SRR4302537.5355752/1‑94 (MQ=60)

                               TCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTT                                                               <  SRR4302537.330205/94‑1 (MQ=60)

                                CTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTC                                                              >  SRR4302537.4165144/1‑94 (MQ=60)

                                 TCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCT                                                             <  SRR4302537.5470253/94‑1 (MQ=60)

                                 TCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCT                                                             >  SRR4302537.4735572/1‑94 (MQ=60)

                                 TCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCT                                                             <  SRR4302537.192891/94‑1 (MQ=60)

                                  CTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTA                                                            >  SRR4302537.5937389/1‑94 (MQ=60)

                                   TTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAGCTTCATCTTCTAT                                                           <  SRR4302537.3906129/94‑1 (MQ=60)

                                   TTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTAT                                                           >  SRR4302537.435018/1‑94 (MQ=60)

                                    TCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATA                                                          <  SRR4302537.928254/94‑1 (MQ=60)

                                    TCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATA                                                          >  SRR4302537.4967460/1‑94 (MQ=60)

                                    TCTGTTCAGGATACTGATTATTGTACTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATA                                                          <  SRR4302537.6290461/94‑1 (MQ=60)

                                     CTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATAT                                                         <  SRR4302537.4173021/94‑1 (MQ=60)

                                     CTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATAT                                                         >  SRR4302537.3128117/1‑94 (MQ=60)

                                     CTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATAT                                                         <  SRR4302537.4267065/94‑1 (MQ=60)

                                      TGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATT                                                        >  SRR4302537.2099499/1‑94 (MQ=60)

                                      TGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATT                                                        >  SRR4302537.5093957/1‑94 (MQ=60)

                                        TTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAA                                                      >  SRR4302537.2330176/1‑94 (MQ=60)

                                          CAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGC                                                    <  SRR4302537.695143/94‑1 (MQ=60)

                                          CAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGC                                                    >  SRR4302537.2357416/1‑94 (MQ=60)

                                          CAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGC                                                    >  SRR4302537.3612005/1‑94 (MQ=60)

                                           AGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCA                                                   >  SRR4302537.4237163/1‑94 (MQ=60)

                                            GGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAA                                                  <  SRR4302537.1776721/94‑1 (MQ=60)

                                             GATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAAC                                                 >  SRR4302537.5702818/1‑94 (MQ=60)

                                              ATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACT                                                >  SRR4302537.4464396/1‑94 (MQ=60)

                                              ATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACT                                                >  SRR4302537.1996646/1‑94 (MQ=60)

                                              ATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACT                                                <  SRR4302537.5190426/94‑1 (MQ=60)

                                               TACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTG                                               >  SRR4302537.5938110/1‑94 (MQ=60)

                                               TACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTG                                               >  SRR4302537.3240639/1‑94 (MQ=60)

                                                ACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGG                                              >  SRR4302537.430818/1‑94 (MQ=60)

                                                ACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGG                                              <  SRR4302537.4023794/94‑1 (MQ=60)

                                                ACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGG                                              >  SRR4302537.163687/1‑94 (MQ=60)

                                                   GATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTA                                           >  SRR4302537.598250/1‑94 (MQ=60)

                                                   GATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTA                                           <  SRR4302537.1280055/94‑1 (MQ=60)

                                                   GATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTA                                           >  SRR4302537.2200996/1‑94 (MQ=60)

                                                   GATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTA                                           <  SRR4302537.3294892/94‑1 (MQ=60)

                                                    ATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAA                                          >  SRR4302537.2107563/1‑94 (MQ=60)

                                                    ATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAA                                          >  SRR4302537.1194518/1‑94 (MQ=60)

                                                     TTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAG                                         <  SRR4302537.3890354/94‑1 (MQ=60)

                                                     TTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAG                                         >  SRR4302537.2956614/1‑94 (MQ=60)

                                                      TATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGG                                        <  SRR4302537.3574270/94‑1 (MQ=60)

                                                      TATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGG                                        <  SRR4302537.2271190/94‑1 (MQ=60)

                                                      TATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGG                                        >  SRR4302537.4516792/1‑94 (MQ=60)

                                                      TATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGG                                        >  SRR4302537.1961061/1‑94 (MQ=60)

                                                       ATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGA                                       >  SRR4302537.2865059/1‑94 (MQ=60)

                                                        TTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTTCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAA                                      >  SRR4302537.5317125/1‑94 (MQ=60)

                                                        TTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAA                                      <  SRR4302537.5762691/94‑1 (MQ=60)

                                                        TTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGAAA                                      >  SRR4302537.4894524/1‑94 (MQ=60)

                                                        TTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTAGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAA                                      >  SRR4302537.1229082/1‑94 (MQ=60)

                                                         TGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAA                                     >  SRR4302537.1980823/1‑94 (MQ=60)

                                                         TGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAA                                     >  SRR4302537.381066/1‑94 (MQ=60)

                                                         TGTATTAACATTAGTGTTAAGATGCTCATTAAAGGCCTCCCTTAGCAATACGTTGGGAGCTTCATCTTCTATATTTAGCTACTGGCTAAagaat                                     >  SRR4302537.6037583/1‑89 (MQ=60)

                                                           TATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATT                                   <  SRR4302537.3793391/94‑1 (MQ=60)

                                                           TATTAACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATT                                   <  SRR4302537.5203550/94‑1 (MQ=60)

                                                               AACATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCT                               <  SRR4302537.5495221/94‑1 (MQ=60)

                                                                 CATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCC                             >  SRR4302537.3938095/1‑94 (MQ=60)

                                                                 CATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCC                             >  SRR4302537.2295708/1‑94 (MQ=60)

                                                                 CATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCC                             <  SRR4302537.5757467/94‑1 (MQ=60)

                                                                 CATTAGTGTTAAGTTGCTCATTAAAGCTCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCC                             >  SRR4302537.5097452/1‑94 (MQ=60)

                                                                  ATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCT                            >  SRR4302537.4554974/1‑94 (MQ=60)

                                                                  ATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCT                            >  SRR4302537.4382822/1‑94 (MQ=60)

                                                                  ATTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCT                            >  SRR4302537.990299/1‑94 (MQ=60)

                                                                   TTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTT                           >  SRR4302537.3948906/1‑94 (MQ=60)

                                                                   TTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTT                           <  SRR4302537.3414146/94‑1 (MQ=60)

                                                                   TTAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTT                           <  SRR4302537.3098107/94‑1 (MQ=60)

                                                                    TAGTGTTAAGTTGCTCATTAAAGTTCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTC                          <  SRR4302537.799012/94‑1 (MQ=60)

                                                                    TAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTC                          >  SRR4302537.5629930/1‑94 (MQ=60)

                                                                    TAGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTC                          >  SRR4302537.4073046/1‑94 (MQ=60)

                                                                     AGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCA                         <  SRR4302537.813691/94‑1 (MQ=60)

                                                                     AGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCA                         <  SRR4302537.2268111/94‑1 (MQ=60)

                                                                     AGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCA                         >  SRR4302537.4328471/1‑94 (MQ=60)

                                                                     AGTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCA                         >  SRR4302537.3162114/1‑94 (MQ=60)

                                                                      GTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAG                        <  SRR4302537.3930804/94‑1 (MQ=60)

                                                                      GTGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAG                        <  SRR4302537.6363031/94‑1 (MQ=60)

                                                                       TGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGC                       >  SRR4302537.422823/1‑94 (MQ=60)

                                                                       TGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGC                       >  SRR4302537.1654616/1‑94 (MQ=60)

                                                                       TGTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGC                       <  SRR4302537.3425846/94‑1 (MQ=60)

                                                                        GTTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCC                      >  SRR4302537.4012663/1‑94 (MQ=60)

                                                                         TTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCA                     >  SRR4302537.1583556/1‑94 (MQ=60)

                                                                         TTAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCA                     >  SRR4302537.3145578/1‑94 (MQ=60)

                                                                          TAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCAT                    >  SRR4302537.934151/1‑94 (MQ=60)

                                                                          TAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCAT                    >  SRR4302537.3123061/1‑94 (MQ=60)

                                                                          TAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCAT                    >  SRR4302537.3242027/1‑94 (MQ=60)

                                                                          TAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCAT                    <  SRR4302537.3249678/94‑1 (MQ=60)

                                                                          TAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCAT                    <  SRR4302537.3877264/94‑1 (MQ=60)

                                                                          TAAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCAT                    >  SRR4302537.3684961/1‑94 (MQ=60)

                                                                           AAGTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATG                   <  SRR4302537.2285792/94‑1 (MQ=60)

                                                                             GTTGCTCATTAAAGTTCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGAT                 >  SRR4302537.739456/1‑94 (MQ=60)

                                                                             GTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGAT                 <  SRR4302537.2408151/94‑1 (MQ=60)

                                                                             GTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGAT                 <  SRR4302537.6347596/94‑1 (MQ=60)

                                                                             GTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGAT                 <  SRR4302537.2501319/94‑1 (MQ=60)

                                                                             GTTGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGAT                 >  SRR4302537.710963/1‑94 (MQ=60)

                                                                               TGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTC               >  SRR4302537.3735867/1‑94 (MQ=60)

                                                                               TGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTC               >  SRR4302537.623280/1‑94 (MQ=60)

                                                                               TGCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTC               >  SRR4302537.6158879/1‑94 (MQ=60)

                                                                                GCTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCC              <  SRR4302537.5388597/94‑1 (MQ=60)

                                                                                 CTCATTAAAGTTCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCC             <  SRR4302537.5563378/94‑1 (MQ=60)

                                                                                 CTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCC             >  SRR4302537.2252283/1‑94 (MQ=60)

                                                                                 CTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCC             >  SRR4302537.183213/1‑94 (MQ=60)

                                                                                 CTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCC             >  SRR4302537.4635225/1‑94 (MQ=60)

                                                                                 CTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCC             <  SRR4302537.6371638/94‑1 (MQ=60)

                                                                                 CTCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCC             >  SRR4302537.5086830/1‑94 (MQ=60)

                                                                                  TCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCA            >  SRR4302537.5992541/1‑94 (MQ=60)

                                                                                  TCATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCA            >  SRR4302537.4642944/1‑94 (MQ=60)

                                                                                   CATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCAA           >  SRR4302537.5560293/1‑94 (MQ=60)

                                                                                    ATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCAAA          >  SRR4302537.3178674/1‑94 (MQ=60)

                                                                                    ATTAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCAAA          <  SRR4302537.265412/94‑1 (MQ=60)

                                                                                      TAATGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCAAATG        >  SRR4302537.5017828/1‑94 (MQ=60)

                                                                                      TAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCAAATG        <  SRR4302537.5455153/94‑1 (MQ=60)

                                                                                      TAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCAAATG        <  SRR4302537.2460107/94‑1 (MQ=60)

                                                                                      TAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCAAATG        >  SRR4302537.6008771/1‑94 (MQ=60)

                                                                                      TAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCAAATG        >  SRR4302537.4538887/1‑94 (MQ=60)

                                                                                      TAAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCAAATG        <  SRR4302537.4685935/94‑1 (MQ=60)

                                                                                       AAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCAAATGT       >  SRR4302537.2086297/1‑94 (MQ=60)

                                                                                       AAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCAAATGT       >  SRR4302537.5023519/1‑94 (MQ=60)

                                                                                       AAAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCAAATGT       >  SRR4302537.1388708/1‑94 (MQ=60)

                                                                                        AAGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCAAATGTC      >  SRR4302537.2086944/1‑94 (MQ=60)

                                                                                         AGTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCAAATGTCC     >  SRR4302537.2512390/1‑94 (MQ=60)

                                                                                          GTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCAAATGTCCC    <  SRR4302537.2524869/94‑1 (MQ=60)

                                                                                          GTCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCAAATGTCCC    <  SRR4302537.691107/94‑1 (MQ=60)

                                                                                           TTCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCAAATGTCCCG   <  SRR4302537.1109981/94‑1 (MQ=60)

                                                                                           TCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCAAATGTCCCG   >  SRR4302537.3722935/1‑94 (MQ=60)

                                                                                           TCCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCAAATGTCCCG   <  SRR4302537.5232801/94‑1 (MQ=60)

                                                                                            CCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCAAATGTCCCGT  <  SRR4302537.6376998/94‑1 (MQ=60)

                                                                                            CCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCAAATGTCCCGT  >  SRR4302537.4974971/1‑94 (MQ=60)

TAAATAAGGCTGAAGACTTTCTAAAATAATGTCTCTTCTGTTCAGGATACTGATTATTGTATTAACATTAGTGTTAAGTTGCTCATTAAAGTTCTCCCTTAGCAATACGTTGAGAACTTCATCTTCTATATTAAGCAACTGGCTAAGGAAATTTTCTCCTTCAGCCATGATTCCCAAATGTCCCGT  >  NC_000913/3629384‑3629569

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`