Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,675,983 |
T→C |
T5A (ACG→GCG) |
yhjG ← |
hypothetical protein |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,675,983 | 0 | T | C | 100.0%
| 975.9
/ NA
| 278 | T5A (ACG→GCG) | yhjG | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (164/114); total (164/114) |
Only 100 of 295 total aligned reads displayed.
CAAAAGTTGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTAT > NC_000913/3675893‑3676072
|
cAAAAGTTGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTc < 1:2343751/93‑1 (MQ=255)
aaaGTTGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCAtcgctcgc > 1:5376478/1‑93 (MQ=255)
aaaGTTGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCAtcgctcgc > 1:2113716/1‑93 (MQ=255)
aaGTTGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATcgctcgct < 2:4573501/93‑1 (MQ=255)
gTTGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTc > 2:901388/1‑93 (MQ=255)
gTTGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTc > 1:353774/1‑93 (MQ=255)
ttGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTcc < 2:311574/93‑1 (MQ=255)
gCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTc < 2:3909890/93‑1 (MQ=255)
gCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTc < 1:5731451/93‑1 (MQ=255)
cAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCa > 2:4813874/1‑93 (MQ=255)
cAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCa < 2:5607979/93‑1 (MQ=255)
aaTCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCat > 1:3077249/1‑93 (MQ=255)
aTCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCata < 2:2480193/93‑1 (MQ=255)
aTCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCata < 2:5438807/93‑1 (MQ=255)
tCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCatat > 1:643706/1‑93 (MQ=255)
tCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCatat < 1:716733/93‑1 (MQ=255)
aaaTGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATAttct > 2:2909470/1‑93 (MQ=255)
tGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTcc > 2:146303/1‑93 (MQ=255)
tGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTCCCTTGCTCATCGCTCGCTTCCTCATATTCTTcc < 2:4088402/93‑1 (MQ=255)
gATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCt < 1:4500585/93‑1 (MQ=255)
aTCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCtg > 1:1222855/1‑93 (MQ=255)
tCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCtgt < 1:2399140/93‑1 (MQ=255)
cGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCtgtg < 2:6466398/93‑1 (MQ=255)
gCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGc > 1:3380482/1‑93 (MQ=255)
cACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCa > 2:592738/1‑93 (MQ=255)
cACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCa > 2:1232981/1‑93 (MQ=255)
cACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCa > 1:76022/1‑93 (MQ=255)
aCGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAg < 2:1335330/93‑1 (MQ=255)
cGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGt < 1:5794099/93‑1 (MQ=255)
aCAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTcc > 2:5271842/1‑93 (MQ=255)
aCAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTcc < 2:3729017/93‑1 (MQ=255)
cAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCt > 1:1900541/1‑93 (MQ=255)
aaTCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCGTATTCTTCCTGTGCCAGTCCTa > 1:4066897/1‑93 (MQ=255)
aaTCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTa < 1:2208920/93‑1 (MQ=255)
aTCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTaa > 1:5595222/1‑93 (MQ=255)
caacaacaaGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAg > 2:5537737/1‑93 (MQ=255)
aacaacaaGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGa > 1:5526485/1‑93 (MQ=255)
aacaacaaGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGa < 1:1331702/93‑1 (MQ=255)
acaacaaGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGAt > 1:6222734/1‑93 (MQ=255)
acaacaaGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGAt > 2:4515013/1‑93 (MQ=255)
acaacaaGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGAt > 2:4137025/1‑93 (MQ=255)
acaacaaGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGAt > 2:4911025/1‑93 (MQ=255)
acaacaaGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGAt > 2:1879499/1‑93 (MQ=255)
caacaaGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATa > 2:5637254/1‑93 (MQ=255)
caacaaGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATa < 2:727502/93‑1 (MQ=255)
aacaaGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCCGTCCTAAAGATAg > 1:5354041/1‑93 (MQ=255)
acaaGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGt < 1:1018397/93‑1 (MQ=255)
acaaGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGt > 2:3581156/1‑93 (MQ=255)
aGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTcca > 1:3476644/1‑93 (MQ=255)
aGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTcca > 1:5314695/1‑93 (MQ=255)
aGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTcca > 1:5174616/1‑93 (MQ=255)
aGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTcca < 2:5097226/93‑1 (MQ=255)
aaaGCCCCTGAAATCGCAGCGGTTATTTTGCCTTCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTccagc > 1:6156479/1‑93 (MQ=255)
aaGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTccagcc > 1:225429/1‑93 (MQ=255)
aaGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTccagcc < 2:252181/93‑1 (MQ=255)
aaGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTccagcc > 2:2350001/1‑93 (MQ=255)
gCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTccagccag > 2:5005131/1‑93 (MQ=255)
gCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTccagccag < 1:3896455/93‑1 (MQ=255)
gCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTccagccag < 2:5951022/93‑1 (MQ=255)
gCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTccagccag < 2:5770529/93‑1 (MQ=255)
cgcTGAAACCGCAGCGGTTATTTTGCATGCCTTGCTCATCGGTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGc < 2:4591530/91‑1 (MQ=255)
cccTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGc > 1:964738/1‑93 (MQ=255)
cTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCgg > 1:1723608/1‑93 (MQ=255)
gAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGaa > 2:793580/1‑93 (MQ=255)
gAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGaa > 2:6473642/1‑93 (MQ=255)
gAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGaa > 2:3455316/1‑93 (MQ=255)
aaaTCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGaaa < 1:4259942/93‑1 (MQ=255)
aaTCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGaaaa < 1:420554/93‑1 (MQ=255)
aTCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAAt < 2:5155775/93‑1 (MQ=255)
aTCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAAt > 1:4674119/1‑93 (MQ=255)
tCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATg > 1:2765827/1‑93 (MQ=255)
cGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGa < 1:2919355/93‑1 (MQ=255)
cGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGa < 1:606730/93‑1 (MQ=255)
gCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAg > 2:2648589/1‑93 (MQ=255)
gCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAg < 2:6059216/93‑1 (MQ=255)
gCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAg < 2:1958286/93‑1 (MQ=255)
gTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCt > 1:1542848/1‑93 (MQ=255)
ttATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCtt > 2:4244701/1‑93 (MQ=255)
ttATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCtt > 1:1423869/1‑93 (MQ=255)
tATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTta < 1:4283274/93‑1 (MQ=255)
tttttGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTtat < 1:483066/92‑1 (MQ=255)
ttttGCCTGCCTTGCTCATCGCTAGCTTCCTCATATTCTTCCTGTGCCAGTCATAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTtata > 2:181933/1‑93 (MQ=255)
tttGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAg < 2:395531/93‑1 (MQ=255)
ttGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAgc < 2:3213510/93‑1 (MQ=255)
tgcctgccTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAgcg < 2:5695855/93‑1 (MQ=255)
gcctgcctTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAgcgc > 1:1034378/1‑93 (MQ=255)
gcctgcctTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAgcgc < 2:1752839/93‑1 (MQ=255)
ctgcctTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCa > 2:3492407/1‑93 (MQ=255)
gcctTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGa > 1:3257512/1‑93 (MQ=255)
ctTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAAc > 1:5422503/1‑93 (MQ=255)
ttGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAAcc > 1:3757160/1‑93 (MQ=255)
ttGCTCATCGCTCGCTTCCTCATATTCTCCCTGTGCCAGCCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAAcc < 1:5542080/93‑1 (MQ=255)
gCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAAccgc > 1:37766/1‑93 (MQ=255)
tCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAAccgccg > 1:2062954/1‑93 (MQ=255)
tCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAAccgccg > 2:6251505/1‑93 (MQ=255)
tCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAAccgccg > 2:1097046/1‑93 (MQ=255)
cATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGt < 1:3173220/93‑1 (MQ=255)
cATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGt > 1:5657260/1‑93 (MQ=255)
aTCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTa < 2:1676692/93‑1 (MQ=255)
aTCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTa > 1:5953546/1‑93 (MQ=255)
|
CAAAAGTTGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTAT > NC_000913/3675893‑3676072
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGTCAAAAGTTGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAG > NC_000913/3675890‑3676076
|
AGTCAAAAGTTGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGC > SRR4302537.664447/1‑94 (MQ=60)
GTCAAAAGTTGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCT > SRR4302537.964856/1‑94 (MQ=60)
GTCAAAAGTTGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCT < SRR4302537.1919987/94‑1 (MQ=60)
TCAAAAGTTGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTC < SRR4302537.2155882/94‑1 (MQ=60)
TCAAAAGTTGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTC < SRR4302537.6087866/94‑1 (MQ=60)
TCAAAAGTTGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTC < SRR4302537.2830528/94‑1 (MQ=60)
TCAAAAGTTGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTC > SRR4302537.1391345/1‑94 (MQ=60)
CAAAAGTTGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCG > SRR4302537.1028115/1‑94 (MQ=60)
CAAAAGTTGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCG < SRR4302537.2360257/94‑1 (MQ=60)
CAAAAGTTGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCACTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCG < SRR4302537.4583219/94‑1 (MQ=60)
AAAAGTTGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGC > SRR4302537.4789614/1‑94 (MQ=60)
AAAAGTTGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGC > SRR4302537.5413260/1‑94 (MQ=60)
AAAAGTTGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGC > SRR4302537.2205946/1‑94 (MQ=60)
AAAAGTTGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGC > SRR4302537.2128610/1‑94 (MQ=60)
AAGTTGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTT < SRR4302537.2982935/94‑1 (MQ=60)
AGTTGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTC > SRR4302537.356235/1‑94 (MQ=60)
TTGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCT < SRR4302537.365025/94‑1 (MQ=60)
TTGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCT > SRR4302537.2967023/1‑94 (MQ=60)
TTGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCT < SRR4302537.414680/94‑1 (MQ=60)
TGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTC < SRR4302537.651588/94‑1 (MQ=60)
TGCAATCAAAATGAGCGCCACGACAATCAACAACAAGAAAGGCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTC < SRR4302537.6197524/94‑1 (MQ=60)
GCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCA > SRR4302537.5737891/1‑94 (MQ=60)
GCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCA < SRR4302537.5770686/94‑1 (MQ=60)
CAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCAT < SRR4302537.433372/94‑1 (MQ=60)
CAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCAT > SRR4302537.3098684/1‑94 (MQ=60)
CAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTNGCTCATCGCTCGCTTCCTCAT > SRR4302537.2285789/1‑94 (MQ=60)
AATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATA > SRR4302537.4080587/1‑94 (MQ=60)
AATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATA > SRR4302537.5536693/1‑94 (MQ=60)
ATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATAT > SRR4302537.648093/1‑94 (MQ=60)
ATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATAT > SRR4302537.921623/1‑94 (MQ=60)
TCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATT < SRR4302537.721629/94‑1 (MQ=60)
AAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCT > SRR4302537.3446792/1‑94 (MQ=60)
ATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCC < SRR4302537.4308915/94‑1 (MQ=60)
ATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCC < SRR4302537.1465892/94‑1 (MQ=60)
ATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCC > SRR4302537.2569520/1‑94 (MQ=60)
TGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCT > SRR4302537.2802705/1‑94 (MQ=60)
TGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCT > SRR4302537.4054184/1‑94 (MQ=60)
TGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCT < SRR4302537.83569/94‑1 (MQ=60)
TGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCT < SRR4302537.2398481/94‑1 (MQ=60)
GATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTG > SRR4302537.3852179/1‑94 (MQ=60)
GATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTG < SRR4302537.4531710/94‑1 (MQ=60)
GATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTG > SRR4302537.1231353/1‑94 (MQ=60)
ATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGT > SRR4302537.734958/1‑94 (MQ=60)
ATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGT > SRR4302537.6245521/1‑94 (MQ=60)
TCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTG < SRR4302537.1365080/94‑1 (MQ=60)
TCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTG < SRR4302537.2416036/94‑1 (MQ=60)
TCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTG < SRR4302537.6492261/94‑1 (MQ=60)
CGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGC > SRR4302537.3404434/1‑94 (MQ=60)
CGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGC > SRR4302537.1190303/1‑94 (MQ=60)
CCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCA > SRR4302537.76582/1‑94 (MQ=60)
CCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCA > SRR4302537.5135125/1‑94 (MQ=60)
CCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCA > SRR4302537.5386156/1‑94 (MQ=60)
CACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAG > SRR4302537.3191711/1‑94 (MQ=60)
CGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTC > SRR4302537.5352169/1‑94 (MQ=60)
CGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTC < SRR4302537.5833818/94‑1 (MQ=60)
GACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTTC > SRR4302537.5641671/1‑94 (MQ=60)
ACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCT > SRR4302537.1913741/1‑94 (MQ=60)
CAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCGTATTCTTCCTGTGCCAGTCCTA > SRR4302537.4095311/1‑94 (MQ=60)
CAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTA > SRR4302537.1701150/1‑94 (MQ=60)
CAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTA > SRR4302537.3538855/1‑94 (MQ=60)
AATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAA < SRR4302537.2224494/94‑1 (MQ=60)
AATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAA > SRR4302537.5633482/1‑94 (MQ=60)
AATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAA > SRR4302537.5602708/1‑94 (MQ=60)
TCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAG < SRR4302537.3693485/94‑1 (MQ=60)
CAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGA > SRR4302537.1475434/1‑94 (MQ=60)
CAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGA > SRR4302537.5564208/1‑94 (MQ=60)
CAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTAGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGA > SRR4302537.6445347/1‑94 (MQ=60)
AACAACAAGAAAGCCCCTGAAATCGCAGCTGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGAT < SRR4302537.5566111/94‑1 (MQ=60)
AACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGAT < SRR4302537.1340984/94‑1 (MQ=60)
AACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGAT > SRR4302537.6265567/1‑94 (MQ=60)
ACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATA > SRR4302537.742686/1‑94 (MQ=60)
ACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATA < SRR4302537.1587695/94‑1 (MQ=60)
CAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCCGTCCTAAAGATAG > SRR4302537.5390707/1‑94 (MQ=60)
CAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAG < SRR4302537.4273203/94‑1 (MQ=60)
AACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGT > SRR4302537.4223754/1‑94 (MQ=60)
ACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTC < SRR4302537.1025414/94‑1 (MQ=60)
ACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTC < SRR4302537.3344139/94‑1 (MQ=60)
ACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTC > SRR4302537.3803696/1‑94 (MQ=60)
CAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCC > SRR4302537.5466930/1‑94 (MQ=60)
AAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCA < SRR4302537.184234/94‑1 (MQ=60)
AAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCA > SRR4302537.5210234/1‑94 (MQ=60)
AAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCA > SRR4302537.5351192/1‑94 (MQ=60)
AAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCA > SRR4302537.3501249/1‑94 (MQ=60)
AGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTTCTGTGCCAGTCCTAAAGATAGTCCAG > SRR4302537.5640062/1‑94 (MQ=60)
AGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAG > SRR4302537.3236632/1‑94 (MQ=60)
AGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAG < SRR4302537.3785459/94‑1 (MQ=60)
GAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTTCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGC > SRR4302537.6198842/1‑94 (MQ=60)
AAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCC > SRR4302537.227030/1‑94 (MQ=60)
AAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCC < SRR4302537.4259291/94‑1 (MQ=60)
AGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAG < SRR4302537.1165375/94‑1 (MQ=60)
AGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAG > SRR4302537.5803649/1‑94 (MQ=60)
GCCCCTGAAATCGCAGCGTTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGG < SRR4302537.4844760/94‑1 (MQ=60)
GCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGG < SRR4302537.3923694/94‑1 (MQ=60)
CCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGC < SRR4302537.5591515/94‑1 (MQ=60)
CCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGC > SRR4302537.971395/1‑94 (MQ=60)
CCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCG < SRR4302537.2259699/94‑1 (MQ=60)
CCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGG > SRR4302537.469845/1‑94 (MQ=60)
CCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGG > SRR4302537.1735651/1‑94 (MQ=60)
CCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGG > SRR4302537.2460972/1‑94 (MQ=60)
CTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGA > SRR4302537.2406313/1‑94 (MQ=60)
CTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGA > SRR4302537.5885836/1‑94 (MQ=60)
TGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAA > SRR4302537.3207000/1‑94 (MQ=60)
TGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAA > SRR4302537.6158683/1‑94 (MQ=60)
GAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAA > SRR4302537.4458746/1‑94 (MQ=60)
AAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAA < SRR4302537.4289544/94‑1 (MQ=60)
AATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAAT > SRR4302537.4297936/1‑94 (MQ=60)
AATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAAT < SRR4302537.423468/94‑1 (MQ=60)
AATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAAT > SRR4302537.4706453/1‑94 (MQ=60)
ATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATG > SRR4302537.2785154/1‑94 (MQ=60)
CGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAG < SRR4302537.2939872/94‑1 (MQ=60)
CGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAG < SRR4302537.6363240/94‑1 (MQ=60)
CGCAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAG < SRR4302537.610878/94‑1 (MQ=60)
CAGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGC < SRR4302537.3147336/94‑1 (MQ=60)
AGCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCA < SRR4302537.6013230/94‑1 (MQ=60)
GCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAG < SRR4302537.3416031/94‑1 (MQ=60)
GCGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAG < SRR4302537.529644/94‑1 (MQ=60)
CGGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGC > SRR4302537.2195491/1‑94 (MQ=60)
GGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCT > SRR4302537.1553620/1‑94 (MQ=60)
GGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCT < SRR4302537.5564630/94‑1 (MQ=60)
GGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCT < SRR4302537.5406408/94‑1 (MQ=60)
GGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCT < SRR4302537.1747690/94‑1 (MQ=60)
GGTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCT > SRR4302537.4910095/1‑94 (MQ=60)
GTTATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTT > SRR4302537.1433783/1‑94 (MQ=60)
TATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTAT > SRR4302537.5401406/1‑94 (MQ=60)
TATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTAT < SRR4302537.2903284/94‑1 (MQ=60)
TATTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTAT < SRR4302537.4313050/94‑1 (MQ=60)
TTTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATA < SRR4302537.486376/94‑1 (MQ=60)
TTTTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAG < SRR4302537.5809889/94‑1 (MQ=60)
TTGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCG < SRR4302537.2313438/94‑1 (MQ=60)
TGCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGC > SRR4302537.1041505/1‑94 (MQ=60)
GCCTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCTAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCC > SRR4302537.6247679/1‑94 (MQ=60)
CTGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAG > SRR4302537.5254793/1‑94 (MQ=60)
TGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGA > SRR4302537.3384239/1‑94 (MQ=60)
TGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGA > SRR4302537.3280480/1‑94 (MQ=60)
TGCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGA > SRR4302537.5455130/1‑94 (MQ=60)
GCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAA > SRR4302537.5438509/1‑94 (MQ=60)
GCCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAA > SRR4302537.2037468/1‑94 (MQ=60)
CCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGTCGGAAAATGAGGCAGCTTATAGCGCCAGAAC > SRR4302537.6003854/1‑94 (MQ=60)
CCTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAAC > SRR4302537.5459450/1‑94 (MQ=60)
CTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACC > SRR4302537.2123359/1‑94 (MQ=60)
CTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACC > SRR4302537.3783535/1‑94 (MQ=60)
CTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACC > SRR4302537.2244700/1‑94 (MQ=60)
CTTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACC > SRR4302537.5937986/1‑94 (MQ=60)
TTGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCG > SRR4302537.1000544/1‑94 (MQ=60)
TTGCTCATCGCTCGCTTCCTCATATTCTCCCTGTGCCAGCCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCG < SRR4302537.5579921/94‑1 (MQ=60)
TGCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGC > SRR4302537.38053/1‑94 (MQ=60)
GCTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCC > SRR4302537.1276349/1‑94 (MQ=60)
CTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCG > SRR4302537.2077440/1‑94 (MQ=60)
CTCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCG > SRR4302537.1324671/1‑94 (MQ=60)
TCATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGT > SRR4302537.5695977/1‑94 (MQ=60)
CATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTA < SRR4302537.3195514/94‑1 (MQ=60)
CATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTA > SRR4302537.5994418/1‑94 (MQ=60)
ATCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTAT > SRR4302537.1990622/1‑94 (MQ=60)
TCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATT < SRR4302537.2119213/94‑1 (MQ=60)
TCGCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATT < SRR4302537.3801808/94‑1 (MQ=60)
GCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGCGGCAGCTTATAGCGCCAGAACCGCCGTATTCA > SRR4302537.4284317/1‑94 (MQ=60)
GCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCA < SRR4302537.1647849/94‑1 (MQ=60)
GCTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCA > SRR4302537.5881451/1‑94 (MQ=60)
CTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAG > SRR4302537.3352758/1‑94 (MQ=60)
CTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAG < SRR4302537.1781903/94‑1 (MQ=60)
CTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAG > SRR4302537.1850594/1‑94 (MQ=60)
CTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAG > SRR4302537.1960297/1‑94 (MQ=60)
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AGTCAAAAGTTGCAATCAAAATGATCGCCACGACAATCAACAACAAGAAAGCCCCTGAAATCGCAGCGGTTATTTTGCCTGCCTTGCTCATCGTTCGCTTCCTCATATTCTTCCTGTGCCAGTCCTAAAGATAGTCCAGCCAGGCGGAAAATGAGGCAGCTTATAGCGCCAGAACCGCCGTATTCAG > NC_000913/3675890‑3676076
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |