Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,682,392 |
A→G |
V275A (GTG→GCG) |
yhjK ← |
hypothetical protein |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,682,392 | 0 | A | G | 100.0%
| 999.5
/ NA
| 286 | V275A (GTG→GCG) | yhjK | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (132/154); total (132/154) |
Only 100 of 294 total aligned reads displayed.
TCTGCGCGAGGATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCACGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAGCATCTCCATC > NC_000913/3682303‑3682481
|
cTGCGCGAGGATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGcc < 2:206231/93‑1 (MQ=255)
cTGCGCGAGGATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGcc < 2:3757107/93‑1 (MQ=255)
tGCGCGAGGATCATACGTGGCGACAGTACTGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGccc < 2:5416914/93‑1 (MQ=255)
tGCGCGAGGATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGccc < 1:3046555/93‑1 (MQ=255)
gcgcGAGGATCTTACGTGGCTACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCGTTCAGCGCGCCCg < 2:1237644/93‑1 (MQ=255)
gcgAGGATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCa > 2:6177884/1‑93 (MQ=255)
gAGGATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGt > 2:1731950/1‑93 (MQ=255)
aGGATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTa < 1:5692164/93‑1 (MQ=255)
aGGATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTa < 2:1152668/93‑1 (MQ=255)
aGGATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTa < 1:2941357/93‑1 (MQ=255)
aGGATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTa < 2:5479632/93‑1 (MQ=255)
aGGATCATACGGGGCGACAGTACCGATTTGAGGTGTTCCACCATCGGCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTa > 2:4748438/1‑93 (MQ=255)
ggATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTAt > 2:3647786/1‑93 (MQ=255)
gATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATc < 2:5628188/93‑1 (MQ=255)
aTCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCa > 2:2408555/1‑93 (MQ=255)
aTCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCa > 1:6183468/1‑93 (MQ=255)
tCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCAc < 2:5878250/93‑1 (MQ=255)
tCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCAc > 2:679694/1‑93 (MQ=255)
tCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCAc < 1:2023688/93‑1 (MQ=255)
tCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCATCTTTCAGCGCGCCCGCAGTATCAc > 1:1464395/1‑93 (MQ=255)
cATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACg > 1:4843570/1‑93 (MQ=255)
aTACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGc > 1:2652293/1‑93 (MQ=255)
tACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCa > 2:5390940/1‑93 (MQ=255)
tACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCa < 2:6261225/93‑1 (MQ=255)
tACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCa > 2:5974661/1‑93 (MQ=255)
tACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCa > 1:1366884/1‑93 (MQ=255)
aCGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAg > 2:5168170/1‑93 (MQ=255)
cGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAgg < 1:3250125/93‑1 (MQ=255)
gTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAggg < 2:4940095/93‑1 (MQ=255)
tGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGt < 1:754879/93‑1 (MQ=255)
ggCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGtt < 1:714650/93‑1 (MQ=255)
gCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGttt > 2:859797/1‑93 (MQ=255)
cGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCCCGCAGGGTTTc < 2:1468500/93‑1 (MQ=255)
cGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTc < 1:4646681/93‑1 (MQ=255)
gACAGTACCGATTTGAGTTTTTGCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTca < 1:5186353/93‑1 (MQ=255)
gACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTcc > 2:1342221/1‑92 (MQ=255)
cAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTcaca < 1:4059968/93‑1 (MQ=255)
aGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGGTTCACAg > 1:4018929/1‑93 (MQ=255)
gTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAgg < 1:126373/93‑1 (MQ=255)
tACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCTCCTCTTTCAGCGCGCCCGGAGTATCACGCAGGGTTTCACAGGt > 2:2972912/1‑93 (MQ=255)
tACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGt < 2:4833261/93‑1 (MQ=255)
aCCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGtg > 1:3171674/1‑93 (MQ=255)
aCCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTATTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGtg > 2:5296230/1‑93 (MQ=255)
gATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGtgttg > 2:348666/1‑93 (MQ=255)
aTTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGtgatga > 1:1921108/1‑93 (MQ=255)
aTTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGtgatga < 1:5357682/93‑1 (MQ=255)
tttGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTgatgat < 1:238796/93‑1 (MQ=255)
tttGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTgatgat > 1:3946263/1‑93 (MQ=255)
tttGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTgatgat > 1:4196249/1‑93 (MQ=255)
tGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGatca < 2:2535959/93‑1 (MQ=255)
tGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGatca < 2:6037482/93‑1 (MQ=255)
tGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGatca < 1:5991243/93‑1 (MQ=255)
gAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGatcat < 2:2455877/93‑1 (MQ=255)
gAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGatcat < 1:801707/93‑1 (MQ=255)
aGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGatcatc < 2:1873645/93‑1 (MQ=255)
gTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGAtcatca < 2:2274008/93‑1 (MQ=255)
ttttCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAgc > 2:5056084/1‑93 (MQ=255)
ttttCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAgc > 2:4528745/1‑93 (MQ=255)
caccaGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCggt < 2:4236429/93‑1 (MQ=255)
ccaGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCCGGGTTTCACAGGTGATGATCATCAGCGCggtgg > 1:5072891/1‑93 (MQ=255)
ccaGCGTCAGCAGCAGAATTGCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCggtgg < 2:3141442/93‑1 (MQ=255)
caGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCggtggt < 2:2146269/93‑1 (MQ=255)
caGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCggtggt > 1:156379/1‑93 (MQ=255)
gCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGgttt > 2:3534876/1‑93 (MQ=255)
gTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGgtttgt < 2:2937852/93‑1 (MQ=255)
tCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGgtttgtt > 1:3694021/1‑93 (MQ=255)
agcagcagAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTa > 1:6072136/1‑93 (MQ=255)
agcagcagAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTa < 2:6355581/93‑1 (MQ=255)
agcagAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTAcgc < 2:5698434/93‑1 (MQ=255)
agcagAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTAcgc > 1:6376356/1‑93 (MQ=255)
agcagAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTAcgc < 2:2783613/93‑1 (MQ=255)
agcagAATTTCTCGTTGCGCCTCTTTCAGCGAGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGGTTGTTTAcgc > 2:3339649/1‑93 (MQ=255)
gcagAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTAcgcg < 1:2223460/93‑1 (MQ=255)
gcagAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTAcgcg > 2:4061890/1‑93 (MQ=255)
gcagAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGAGTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTAcgcg > 1:5546903/1‑93 (MQ=255)
gAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGa < 2:3854674/93‑1 (MQ=255)
gAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGa > 1:444375/1‑93 (MQ=255)
aaTTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGAc < 2:1640589/93‑1 (MQ=255)
aaTTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGAc < 1:4897721/93‑1 (MQ=255)
aTTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACa > 2:1990829/1‑93 (MQ=255)
aTTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACa < 1:2506930/93‑1 (MQ=255)
tttCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACaa < 1:5826343/93‑1 (MQ=255)
ttCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAAc > 1:313976/1‑93 (MQ=255)
tctcGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAAcc < 1:3539059/93‑1 (MQ=255)
tctcGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAAcc < 1:4278719/93‑1 (MQ=255)
ctcGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCt < 2:4104781/93‑1 (MQ=255)
tcGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTg > 1:187211/1‑93 (MQ=255)
cGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGc > 1:886334/1‑93 (MQ=255)
ttGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTc < 1:55104/93‑1 (MQ=255)
tGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTcc < 1:1975007/93‑1 (MQ=255)
tGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTcc < 2:4696611/93‑1 (MQ=255)
gcgcCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCa < 1:5584040/93‑1 (MQ=255)
cgcCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAg < 1:5765194/93‑1 (MQ=255)
cgcCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAg > 1:3384739/1‑93 (MQ=255)
cgcCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAg < 1:5412832/93‑1 (MQ=255)
gcCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAGc < 1:3768983/93‑1 (MQ=255)
ccTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAGCa > 2:4464103/1‑93 (MQ=255)
tttCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAGCAtctc > 2:1094941/1‑93 (MQ=255)
tCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAGCATCTCCa > 1:2098956/1‑93 (MQ=255)
aGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAGCATCTCCATc > 1:1129256/1‑93 (MQ=255)
|
TCTGCGCGAGGATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCACGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAGCATCTCCATC > NC_000913/3682303‑3682481
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTAATCTGCGCGAGGATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCACGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAGCATCTCCATCAGC > NC_000913/3682299‑3682484
|
CTAATCTGCGCGAGGATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCG > SRR4302537.6024840/1‑94 (MQ=60)
CTAATCTGCGCGAGGATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCG < SRR4302537.5693139/94‑1 (MQ=60)
CTAATCTGCGCGAGGATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCG > SRR4302537.5271664/1‑94 (MQ=60)
CTAATCTGCGCGAGGATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCG > SRR4302537.2440380/1‑94 (MQ=60)
TAATCTGCGCGAGGATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGC < SRR4302537.1173126/94‑1 (MQ=60)
AATCTGCGCGAGGATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCG < SRR4302537.5296151/94‑1 (MQ=60)
CTGCGCGAGGATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCC < SRR4302537.6231406/94‑1 (MQ=60)
TGCGCGAGGATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCG < SRR4302537.89825/94‑1 (MQ=60)
TGCGCGAGGATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCG < SRR4302537.3067782/94‑1 (MQ=60)
GCGCGAGGATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGC < SRR4302537.1892998/94‑1 (MQ=60)
CGCGAGGATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCA > SRR4302537.4730861/1‑94 (MQ=60)
GCGAGGATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAG < SRR4302537.5432510/94‑1 (MQ=60)
GCGAGGATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAG < SRR4302537.5841564/94‑1 (MQ=60)
CGAGGATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGT < SRR4302537.860078/94‑1 (MQ=60)
CGAGGATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGT < SRR4302537.765870/94‑1 (MQ=60)
AGGATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTAT < SRR4302537.4248913/94‑1 (MQ=60)
AGGATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTAT < SRR4302537.5731097/94‑1 (MQ=60)
AGGATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTAT < SRR4302537.2962006/94‑1 (MQ=60)
GGATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATC < SRR4302537.6395861/94‑1 (MQ=60)
GATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCA < SRR4302537.316852/94‑1 (MQ=60)
GATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCA > SRR4302537.3560235/1‑94 (MQ=60)
GATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCA > SRR4302537.2775525/1‑94 (MQ=60)
GATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCA > SRR4302537.6226057/1‑94 (MQ=60)
ATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCAC > SRR4302537.5060403/1‑94 (MQ=60)
ATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCAC < SRR4302537.407079/94‑1 (MQ=60)
ATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCAC < SRR4302537.5397141/94‑1 (MQ=60)
ATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCAC > SRR4302537.2611428/1‑94 (MQ=60)
ATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCATCTTTCAGCGCGCCCGCAGTATCAC > SRR4302537.1474584/1‑94 (MQ=60)
TCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACG < SRR4302537.2037803/94‑1 (MQ=60)
TCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACG > SRR4302537.4877000/1‑94 (MQ=60)
TCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACG < SRR4302537.5186922/94‑1 (MQ=60)
TCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACG < SRR4302537.5855644/94‑1 (MQ=60)
CATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGC > SRR4302537.5156149/1‑94 (MQ=60)
CATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGC < SRR4302537.3142869/94‑1 (MQ=60)
CATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGC > SRR4302537.2670840/1‑94 (MQ=60)
ATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCA > SRR4302537.1376412/1‑94 (MQ=60)
ATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCA < SRR4302537.3032665/94‑1 (MQ=60)
ACACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCA < SRR4302537.5520553/94‑1 (MQ=60)
TACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAG < SRR4302537.2372795/94‑1 (MQ=60)
CGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGG < SRR4302537.3273034/94‑1 (MQ=60)
CGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGG < SRR4302537.2701788/94‑1 (MQ=60)
TGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTT < SRR4302537.1575928/94‑1 (MQ=60)
TGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTT > SRR4302537.1468958/1‑94 (MQ=60)
TGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTT < SRR4302537.760024/94‑1 (MQ=60)
GGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTT < SRR4302537.3224003/94‑1 (MQ=60)
GGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTT < SRR4302537.719537/94‑1 (MQ=60)
GCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTC < SRR4302537.726483/94‑1 (MQ=60)
GCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTC > SRR4302537.5659911/1‑94 (MQ=60)
CGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCA < SRR4302537.3734927/94‑1 (MQ=60)
CGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCA < SRR4302537.4678807/94‑1 (MQ=60)
GACAGTACCGATTTGAGTTTTTGCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCAC < SRR4302537.5222023/94‑1 (MQ=60)
GACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCAC > SRR4302537.1886014/1‑94 (MQ=60)
CAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAG < SRR4302537.4088341/94‑1 (MQ=60)
CAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAG < SRR4302537.152899/94‑1 (MQ=60)
CAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAG < SRR4302537.3278868/94‑1 (MQ=60)
CAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGGTTCACAG > SRR4302537.4047065/1‑94 (MQ=60)
AGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGG > SRR4302537.2257256/1‑94 (MQ=60)
AGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGG > SRR4302537.5868157/1‑94 (MQ=60)
AGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGG > SRR4302537.1937066/1‑94 (MQ=60)
GTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGT < SRR4302537.127278/94‑1 (MQ=60)
TACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTG > SRR4302537.3193958/1‑94 (MQ=60)
TACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTG < SRR4302537.6103178/94‑1 (MQ=60)
TACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTG > SRR4302537.1457835/1‑94 (MQ=60)
TACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTG > SRR4302537.4599258/1‑94 (MQ=60)
ACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGA > SRR4302537.2053643/1‑94 (MQ=60)
ACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGA > SRR4302537.375066/1‑94 (MQ=60)
CCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGAT < SRR4302537.199803/94‑1 (MQ=60)
CGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATG > SRR4302537.3600973/1‑94 (MQ=60)
CGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATG < SRR4302537.4367710/94‑1 (MQ=60)
CGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATG > SRR4302537.2136677/1‑94 (MQ=60)
GATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGA > SRR4302537.2018281/1‑94 (MQ=60)
GATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGA < SRR4302537.1978800/94‑1 (MQ=60)
GATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGA > SRR4302537.1934450/1‑94 (MQ=60)
ATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCGCACGTGATGAT > SRR4302537.3973868/1‑94 (MQ=60)
ATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGAT > SRR4302537.3973866/1‑94 (MQ=60)
ATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGAT > SRR4302537.5880046/1‑94 (MQ=60)
ATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGAT > SRR4302537.4225554/1‑94 (MQ=60)
ATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGAT < SRR4302537.5394375/94‑1 (MQ=60)
TTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATC < SRR4302537.240484/94‑1 (MQ=60)
TTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATC < SRR4302537.1251573/94‑1 (MQ=60)
ATTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCACCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATC < SRR4302537.4880236/94‑1 (MQ=60)
TGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCTCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCAT < SRR4302537.2972081/94‑1 (MQ=60)
TGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCAT < SRR4302537.6032391/94‑1 (MQ=60)
TGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCAT < SRR4302537.4062256/94‑1 (MQ=60)
TGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCAT > SRR4302537.6206605/1‑94 (MQ=60)
GAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATC < SRR4302537.807213/94‑1 (MQ=60)
AGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCA < SRR4302537.6421541/94‑1 (MQ=60)
AGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCA < SRR4302537.6144222/94‑1 (MQ=60)
GTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAG > SRR4302537.5594332/1‑94 (MQ=60)
GTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAG < SRR4302537.3959108/94‑1 (MQ=60)
TTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGC < SRR4302537.715395/94‑1 (MQ=60)
TTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCG > SRR4302537.1499827/1‑94 (MQ=60)
TTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCG > SRR4302537.3904901/1‑94 (MQ=60)
ACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCCGGGTTTCACAGGTGATGATCATCAGCGCGGTGG > SRR4302537.5107816/1‑94 (MQ=60)
CCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGT > SRR4302537.4927686/1‑94 (MQ=60)
CCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGT > SRR4302537.5610389/1‑94 (MQ=60)
CCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGT > SRR4302537.157493/1‑94 (MQ=60)
CAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTT > SRR4302537.5561980/1‑94 (MQ=60)
GTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTT > SRR4302537.3720016/1‑94 (MQ=60)
GTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTT < SRR4302537.4365180/94‑1 (MQ=60)
CAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTA > SRR4302537.6113860/1‑94 (MQ=60)
AGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTAC < SRR4302537.605438/94‑1 (MQ=60)
GCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACG < SRR4302537.5582211/94‑1 (MQ=60)
GCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACG < SRR4302537.5468455/94‑1 (MQ=60)
CAGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGC > SRR4302537.6419839/1‑94 (MQ=60)
AGCATAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCGCGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCG < SRR4302537.4828145/94‑1 (MQ=60)
AGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCG > SRR4302537.2631760/1‑94 (MQ=60)
AGCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGAGTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCG > SRR4302537.5584778/1‑94 (MQ=60)
GCAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGC < SRR4302537.2239124/94‑1 (MQ=60)
CAGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCG < SRR4302537.5757975/94‑1 (MQ=60)
AGAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGA > SRR4302537.447461/1‑94 (MQ=60)
GAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGAC > SRR4302537.130506/1‑94 (MQ=60)
GAATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGAC > SRR4302537.33152/1‑94 (MQ=60)
AATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACA > SRR4302537.771270/1‑94 (MQ=60)
AATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACA < SRR4302537.4931531/94‑1 (MQ=60)
AATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACA < SRR4302537.2146298/94‑1 (MQ=60)
ATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAA > SRR4302537.422801/1‑94 (MQ=60)
ATTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAA < SRR4302537.2524565/94‑1 (MQ=60)
TTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAAC > SRR4302537.316149/1‑94 (MQ=60)
TTTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAAC < SRR4302537.5866278/94‑1 (MQ=60)
TTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACC < SRR4302537.747980/94‑1 (MQ=60)
TTCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACC < SRR4302537.2444730/94‑1 (MQ=60)
TCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCT < SRR4302537.4308460/94‑1 (MQ=60)
TCTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCT < SRR4302537.3564054/94‑1 (MQ=60)
CTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTG > SRR4302537.188541/1‑94 (MQ=60)
CTCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTG > SRR4302537.5066590/1‑94 (MQ=60)
TCGTTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGC > SRR4302537.892433/1‑94 (MQ=60)
TTGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCC < SRR4302537.55512/94‑1 (MQ=60)
TGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCA < SRR4302537.1988736/94‑1 (MQ=60)
TGCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCA < SRR4302537.5749815/94‑1 (MQ=60)
GCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAG < SRR4302537.3511285/94‑1 (MQ=60)
GCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAG > SRR4302537.3408719/1‑94 (MQ=60)
GCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAG > SRR4302537.1645938/1‑94 (MQ=60)
GCGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAG < SRR4302537.5622213/94‑1 (MQ=60)
CGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAGC < SRR4302537.5449740/94‑1 (MQ=60)
CGCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAGC < SRR4302537.5804684/94‑1 (MQ=60)
GCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAGCA > SRR4302537.4170390/1‑94 (MQ=60)
GCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAGCA > SRR4302537.5351644/1‑94 (MQ=60)
GCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAGCA > SRR4302537.368759/1‑94 (MQ=60)
GCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAGCA < SRR4302537.3795444/94‑1 (MQ=60)
GCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAGAA < SRR4302537.4168013/94‑1 (MQ=60)
GCCTCTTTCAGCGCGCCCGCAGTATCACGCAGGGGTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAGCA > SRR4302537.4477336/1‑94 (MQ=60)
TCTTTCAGCGCGCCCGCAGTATCACGCAGGGATTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAGCATCT > SRR4302537.3226665/1‑94 (MQ=60)
CTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAGCATCTC < SRR4302537.2517764/94‑1 (MQ=60)
CTTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAGCATCTC < SRR4302537.3996628/94‑1 (MQ=60)
CGTTCAGCGCGCCCGCAGTATCACGCAGGTTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTGCGCGCGACAACCTGCTCCAGCATCTC < SRR4302537.3079795/94‑1 (MQ=60)
TTTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAGCATCTCC > SRR4302537.845933/1‑94 (MQ=60)
TTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAGCATCTCCA > SRR4302537.1337122/1‑94 (MQ=60)
TTCAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAGCATCTCCA > SRR4302537.2113756/1‑94 (MQ=60)
TTCAGCGCGCCAGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAGCATCTCCA > SRR4302537.563466/1‑94 (MQ=60)
CAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAGCATCTCCATC > SRR4302537.1137091/1‑94 (MQ=60)
CAGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAGCATCTCCATC > SRR4302537.2080548/1‑94 (MQ=60)
AGCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAGCATCTCCATCA > SRR4302537.4511523/1‑94 (MQ=60)
GCGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAGCATCTCCATCAG < SRR4302537.3996986/94‑1 (MQ=60)
CGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAGCATCTCCATCAGC < SRR4302537.356013/94‑1 (MQ=60)
CGCGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAGCATCTCCATCAGC < SRR4302537.5797428/94‑1 (MQ=60)
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CTAATCTGCGCGAGGATCATACGTGGCGACAGTACCGATTTGAGTTTTTCCACCAGCGTCAGCAGCAGAATTTCTCGTTGCGCCTCTTTCAGCACGCCCGCAGTATCACGCAGGGTTTCACAGGTGATGATCATCAGCGCGGTGGTTTGTTTACGCGCGACAACCTGCTCCAGCATCTCCATCAGC > NC_000913/3682299‑3682484
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |