Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,700,934 |
T→C |
T182A (ACC→GCC) |
dppD ← |
putative ATP‑binding component of dipeptide transport system |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,700,934 | 0 | T | C | 100.0%
| 881.0
/ NA
| 255 | T182A (ACC→GCC) | dppD | putative ATP‑binding component of dipeptide transport system |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (133/122); total (133/122) |
Only 100 of 276 total aligned reads displayed.
GGGTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCTGAT > NC_000913/3700844‑3701023
|
ggTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑ggcggt > 2:4921697/1‑93 (MQ=255)
ggTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑ggcggt > 1:4758865/1‑93 (MQ=255)
ggTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑ggcggt < 1:2955738/93‑1 (MQ=255)
gTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTc < 2:696903/93‑1 (MQ=255)
gTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTc > 1:721816/1‑93 (MQ=255)
gTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTc < 1:3895688/93‑1 (MQ=255)
gTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTc > 1:2372422/1‑93 (MQ=255)
tAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTc < 1:1022340/93‑1 (MQ=255)
tAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTc > 2:6222928/1‑93 (MQ=255)
cacCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATc < 2:2985764/93‑1 (MQ=255)
cacCAGCGCCATGTTCTCTTTCTGCTGTACCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATc < 2:1130546/93‑1 (MQ=255)
acCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCg > 1:1111537/1‑93 (MQ=255)
acCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCg > 2:5670824/1‑93 (MQ=255)
acCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCg > 1:5044118/1‑93 (MQ=255)
ccAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCgg > 1:5561161/1‑93 (MQ=255)
ccAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCgg > 1:1671347/1‑93 (MQ=255)
gcgcCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCaa < 2:5978703/93‑1 (MQ=255)
gcCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATc > 2:344563/1‑93 (MQ=255)
gcCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATc > 2:4172629/1‑93 (MQ=255)
ccATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATca > 2:3936361/1‑93 (MQ=255)
ccATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATca > 1:3118469/1‑93 (MQ=255)
ccATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATca < 1:1972498/93‑1 (MQ=255)
cATGTTCTCTTTCTGCTGTATCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATcag < 1:4615672/93‑1 (MQ=255)
cATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATcag < 1:2328026/93‑1 (MQ=255)
cATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATcag > 1:3643837/1‑93 (MQ=255)
cATGTTCTCTTTCTGCTGTAGCTCCAGCAGCAGTTCGATGATTTGCGCCTGAATGGTGACGTCCAGCGC‑GGCGGGCGGTtcatcagtcatcag > 2:4016359/1‑93 (MQ=255)
aTGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTTCAGCGC‑GGCGGTCGGGTCATCGGCAATcagc > 2:1650174/1‑93 (MQ=255)
gTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATcagcag > 1:1927063/1‑93 (MQ=255)
ttCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGt > 2:3158031/1‑93 (MQ=255)
ttCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGt > 1:3703997/1‑93 (MQ=255)
ttCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGt > 1:288999/1‑93 (MQ=255)
tctcTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGtt < 1:4508246/93‑1 (MQ=255)
tctcTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGtt < 1:537114/93‑1 (MQ=255)
tctcTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGtt > 1:1791295/1‑93 (MQ=255)
ctctTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGttt > 2:4598461/1‑93 (MQ=255)
ctctTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGttt < 2:2479986/93‑1 (MQ=255)
tttCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTgg < 2:2743545/93‑1 (MQ=255)
tatgctgTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCCCGTCCAGCGC‑GGCGGTCGGTTCAACGACAATCAGCACTTTTGGcc > 2:5135046/3‑93 (MQ=255)
tgctgTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGa > 1:2648007/1‑93 (MQ=255)
gctgTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGAc < 1:643399/93‑1 (MQ=255)
gctgTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGAc < 2:4471638/93‑1 (MQ=255)
ctgTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGCATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACa > 1:961935/1‑93 (MQ=255)
ctgTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACa < 1:3842910/93‑1 (MQ=255)
ctgTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACa > 1:3237299/1‑93 (MQ=255)
tgTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAg < 2:1300391/93‑1 (MQ=255)
tgTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAg < 1:2055398/93‑1 (MQ=255)
tgTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAg < 2:5382644/93‑1 (MQ=255)
gTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACTTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAgg > 1:5640230/1‑93 (MQ=255)
gCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCaa < 2:848191/93‑1 (MQ=255)
cTCCAGCAGTAGTTCGATGATTTGCGCCTGAATTGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAAt < 2:2322951/93‑1 (MQ=255)
cTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAAt < 1:4871081/93‑1 (MQ=255)
cTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAAt < 1:4151565/93‑1 (MQ=255)
tCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGAGAGGCAATc > 2:5712544/1‑93 (MQ=255)
tCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATc > 1:4334304/1‑93 (MQ=255)
cccAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATc < 2:1560124/92‑1 (MQ=255)
ccAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCg < 2:3648170/93‑1 (MQ=255)
cagcagTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGc < 2:1491859/93‑1 (MQ=255)
gcagTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCa > 2:808124/1‑93 (MQ=255)
gcagTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCa > 2:3119171/1‑93 (MQ=255)
ctgatagtTCGCTGATTTGCGCCTGAATGTTCGCGTCCAGCGC‑GGCGGCCGGTTCATCTGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCa < 2:409598/89‑1 (MQ=255)
cagTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCag > 1:292335/1‑92 (MQ=255)
agtagtTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATg < 1:4406977/93‑1 (MQ=255)
gtagtTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATgg > 2:5040044/1‑93 (MQ=255)
gtagtTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATgg < 2:4038750/93‑1 (MQ=255)
gtagtTCGATGATATGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGATAGGCAATCGCCATgg < 1:5002025/93‑1 (MQ=255)
tagtTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGc < 1:3532464/93‑1 (MQ=255)
atgatTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGatcatc > 1:1200599/1‑93 (MQ=255)
tgatTTTCGCCTGAATGGTCACGTCCCGCGCGGGCGGCCGGTTC‑TCTGCCATCAGCAGGTTTTGCCGGCAGGGAAACGCCCAGGCGgtcattc > 2:5241608/1‑91 (MQ=255)
tgatTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGAtcatca > 1:1541826/1‑93 (MQ=255)
gatTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCAc > 1:5712192/1‑93 (MQ=255)
gatTTGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCAc < 1:2564973/93‑1 (MQ=255)
tttGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCAcgc < 2:2878610/93‑1 (MQ=255)
tttGCGCCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCAcgc < 2:1443743/93‑1 (MQ=255)
gcgcCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCt < 1:5287754/93‑1 (MQ=255)
gcgcCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCt < 2:436187/93‑1 (MQ=255)
cgcCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTg < 1:859664/93‑1 (MQ=255)
cgcCTGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTg > 2:3616914/1‑93 (MQ=255)
tGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTc > 1:4432212/1‑93 (MQ=255)
tGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTc < 2:5821388/93‑1 (MQ=255)
tGAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTc > 1:6379121/1‑93 (MQ=255)
gAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCa > 2:6130983/1‑93 (MQ=255)
gAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCa > 1:5857761/1‑93 (MQ=255)
gAATGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCa < 1:1391477/93‑1 (MQ=255)
aaTGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCag > 1:2141041/1‑92 (MQ=255)
aaTGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCAt < 2:4502040/93‑1 (MQ=255)
aaTGGTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCAt > 1:2230455/1‑93 (MQ=255)
aggTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATgc < 2:2055619/92‑1 (MQ=255)
ggTCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATgcc > 2:3857331/1‑93 (MQ=255)
tCACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCCCCATGGCGATCATCACGCGCTGGCTCATgccgc < 1:2796066/93‑1 (MQ=255)
cACGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATgccgcc < 1:3978536/93‑1 (MQ=255)
aCGTCCAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGccgccg > 2:2576880/1‑93 (MQ=255)
ccAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGaaa < 1:5913432/93‑1 (MQ=255)
cAGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAg < 1:3435027/93‑1 (MQ=255)
aGNGC‑GNCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGc < 1:1317835/93‑1 (MQ=255)
aGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGc < 2:1800521/93‑1 (MQ=255)
aGCGC‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGc < 2:2861874/93‑1 (MQ=255)
gcgc‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCt < 2:1684579/93‑1 (MQ=255)
gcgc‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCt < 2:231056/93‑1 (MQ=255)
gcgc‑GGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCt < 1:2437545/93‑1 (MQ=255)
cgc‑gGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCTg < 2:3282619/93‑1 (MQ=255)
|
GGGTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGC‑GGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCTGAT > NC_000913/3700844‑3701023
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CATGGGTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCTGATGCGG > NC_000913/3700841‑3701027
|
CATGGGTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGC > SRR4302537.6093457/1‑94 (MQ=60)
CATGGGTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGC > SRR4302537.3081628/1‑94 (MQ=60)
CATGGGTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGC > SRR4302537.3355311/1‑94 (MQ=60)
ATGGGTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCG > SRR4302537.6108281/1‑94 (MQ=60)
GGGTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGT > SRR4302537.4791732/1‑94 (MQ=60)
GGTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTC > SRR4302537.2389139/1‑94 (MQ=60)
GGTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTC > SRR4302537.726743/1‑94 (MQ=60)
GGTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTC < SRR4302537.2976477/94‑1 (MQ=60)
GTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCG < SRR4302537.2017483/94‑1 (MQ=60)
GTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCG < SRR4302537.3922920/94‑1 (MQ=60)
TAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGG > SRR4302537.6426712/1‑94 (MQ=60)
AATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGT > SRR4302537.270206/1‑94 (MQ=60)
AATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGT > SRR4302537.5084039/1‑94 (MQ=60)
ATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTT > SRR4302537.2083661/1‑94 (MQ=60)
TTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTC < SRR4302537.3115873/94‑1 (MQ=60)
TAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCA < SRR4302537.1029380/94‑1 (MQ=60)
TAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCA < SRR4302537.4831683/94‑1 (MQ=60)
AACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCAT < SRR4302537.2818703/94‑1 (MQ=60)
CACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCG < SRR4302537.4912405/94‑1 (MQ=60)
CACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCG > SRR4302537.1119213/1‑94 (MQ=60)
CACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCG > SRR4302537.5078857/1‑94 (MQ=60)
CACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCG > SRR4302537.5426720/1‑94 (MQ=60)
CACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCG < SRR4302537.5474258/94‑1 (MQ=60)
ACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGG > SRR4302537.1683052/1‑94 (MQ=60)
ACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGG > SRR4302537.5599163/1‑94 (MQ=60)
AGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAA > SRR4302537.2403759/1‑94 (MQ=60)
AGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAA > SRR4302537.3692226/1‑94 (MQ=60)
CGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATC > SRR4302537.5215042/1‑94 (MQ=60)
CGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATC < SRR4302537.2665971/94‑1 (MQ=60)
CGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATC > SRR4302537.3516240/1‑94 (MQ=60)
CGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATC > SRR4302537.4431018/1‑94 (MQ=60)
GCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCA > SRR4302537.2926595/1‑94 (MQ=60)
GCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCA < SRR4302537.5179046/94‑1 (MQ=60)
GCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCA > SRR4302537.3140259/1‑94 (MQ=60)
GCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCA < SRR4302537.1782789/94‑1 (MQ=60)
CCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAG > SRR4302537.3669497/1‑94 (MQ=60)
CCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAG < SRR4302537.1986212/94‑1 (MQ=60)
CCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAG > SRR4302537.1321706/1‑94 (MQ=60)
CATGTTCTCTTTCTGCTGTATCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGC < SRR4302537.4647639/94‑1 (MQ=60)
CATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGC < SRR4302537.2344444/94‑1 (MQ=60)
ATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCG > SRR4302537.2008886/1‑94 (MQ=60)
ATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCA > SRR4302537.1207595/1‑94 (MQ=60)
ATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCATGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCA > SRR4302537.2971334/1‑94 (MQ=60)
TGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAG > SRR4302537.1940437/1‑94 (MQ=60)
TGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAG < SRR4302537.5730250/94‑1 (MQ=60)
GTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGT > SRR4302537.3730049/1‑94 (MQ=60)
GTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGT > SRR4302537.291006/1‑94 (MQ=60)
GTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGT < SRR4302537.4582962/94‑1 (MQ=60)
TTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTT > SRR4302537.1934579/1‑94 (MQ=60)
TTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTT > SRR4302537.1803802/1‑94 (MQ=60)
TTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTT > SRR4302537.4291854/1‑94 (MQ=60)
TCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTT < SRR4302537.4539419/94‑1 (MQ=60)
TCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTT > SRR4302537.2372953/1‑94 (MQ=60)
TCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTT < SRR4302537.540801/94‑1 (MQ=60)
CTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTT < SRR4302537.4295967/94‑1 (MQ=60)
CTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTT < SRR4302537.2407509/94‑1 (MQ=60)
TCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTG < SRR4302537.3270531/94‑1 (MQ=60)
TCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTG > SRR4302537.5066735/1‑94 (MQ=60)
CTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGG < SRR4302537.4974631/94‑1 (MQ=60)
CTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGG > SRR4302537.3320172/1‑94 (MQ=60)
TTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGC > SRR4302537.6029031/1‑94 (MQ=60)
TTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCC < SRR4302537.3937007/94‑1 (MQ=60)
TTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCC < SRR4302537.6477148/94‑1 (MQ=60)
TCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCG > SRR4302537.1644513/1‑94 (MQ=60)
TCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCG > SRR4302537.3192967/1‑94 (MQ=60)
CTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGA > SRR4302537.2666525/1‑94 (MQ=60)
TGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGAC > SRR4302537.3890778/1‑94 (MQ=60)
TGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGAC > SRR4302537.3535027/1‑94 (MQ=60)
TGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGAC > SRR4302537.4367345/1‑94 (MQ=60)
GCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGCATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACA > SRR4302537.968575/1‑94 (MQ=60)
GCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACA > SRR4302537.3260117/1‑94 (MQ=60)
GCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACA < SRR4302537.647782/94‑1 (MQ=60)
GCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACA < SRR4302537.4496224/94‑1 (MQ=60)
GCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACA < SRR4302537.3886056/94‑1 (MQ=60)
CTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAG > SRR4302537.5637903/1‑94 (MQ=60)
CTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAG < SRR4302537.165961/94‑1 (MQ=60)
CTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAG < SRR4302537.3869822/94‑1 (MQ=60)
TGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACTTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGG > SRR4302537.5678831/1‑94 (MQ=60)
TGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGG < SRR4302537.1398615/94‑1 (MQ=60)
TGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGG < SRR4302537.3797074/94‑1 (MQ=60)
TGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGG < SRR4302537.2069824/94‑1 (MQ=60)
TAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGTCA > SRR4302537.537323/1‑94 (MQ=60)
GCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAAT < SRR4302537.112180/94‑1 (MQ=60)
GCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAAT < SRR4302537.1297991/94‑1 (MQ=60)
GCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAAT < SRR4302537.2308582/94‑1 (MQ=60)
GCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAAT < SRR4302537.4034206/94‑1 (MQ=60)
CTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATC < SRR4302537.4904701/94‑1 (MQ=60)
CTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATC > SRR4302537.3654426/1‑94 (MQ=60)
CTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATC > SRR4302537.4364408/1‑94 (MQ=60)
CTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATC < SRR4302537.4180553/94‑1 (MQ=60)
CTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATC < SRR4302537.4776629/94‑1 (MQ=60)
TCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCG < SRR4302537.916801/94‑1 (MQ=60)
CCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGC > SRR4302537.5606885/1‑94 (MQ=60)
GCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCAT < SRR4302537.2899543/94‑1 (MQ=60)
GCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCAT < SRR4302537.5694352/94‑1 (MQ=60)
GCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCAT < SRR4302537.4551028/94‑1 (MQ=60)
GCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCAG > SRR4302537.294371/1‑94 (MQ=60)
GAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATG < SRR4302537.5935957/94‑1 (MQ=60)
CAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATG < SRR4302537.136589/94‑1 (MQ=60)
AGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGG < SRR4302537.4437387/94‑1 (MQ=60)
GTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGC > SRR4302537.4442153/1‑94 (MQ=60)
GTAGTTCGATGATATGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGATAGGCAATCGCCATGGC < SRR4302537.5036479/94‑1 (MQ=60)
TAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCG < SRR4302537.1921921/94‑1 (MQ=60)
TAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCG < SRR4302537.3557428/94‑1 (MQ=60)
AGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGA > SRR4302537.5045928/1‑94 (MQ=60)
AGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGA > SRR4302537.220370/1‑94 (MQ=60)
GTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGAT < SRR4302537.3779787/94‑1 (MQ=60)
GTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGAT < SRR4302537.2240185/94‑1 (MQ=60)
CGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCAT > SRR4302537.2544607/1‑94 (MQ=60)
GATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATC > SRR4302537.1208947/1‑94 (MQ=60)
ATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCTGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCA < SRR4302537.4671531/94‑1 (MQ=60)
ATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCA > SRR4302537.1552587/1‑94 (MQ=60)
ATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCA > SRR4302537.1118134/1‑94 (MQ=60)
TGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCAC > SRR4302537.2070590/1‑94 (MQ=60)
TGATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCAC > SRR4302537.5751291/1‑94 (MQ=60)
GATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACG < SRR4302537.2582944/94‑1 (MQ=60)
GATTTGCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACG < SRR4302537.1970509/94‑1 (MQ=60)
GCGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTG < SRR4302537.5324107/94‑1 (MQ=60)
CGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGTCATGGCGATCATGACGCGCTGG > SRR4302537.3191788/1‑94 (MQ=60)
CGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGG > SRR4302537.967832/1‑94 (MQ=60)
CGCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGG < SRR4302537.865563/94‑1 (MQ=60)
GCCTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGC > SRR4302537.3065911/1‑94 (MQ=60)
CTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTC > SRR4302537.833607/1‑94 (MQ=60)
CTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTC > SRR4302537.680040/1‑94 (MQ=60)
CTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTC > SRR4302537.6422609/1‑94 (MQ=60)
CTGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTC > SRR4302537.4462817/1‑94 (MQ=60)
TGAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCA > SRR4302537.5897939/1‑94 (MQ=60)
GAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCAT < SRR4302537.1401180/94‑1 (MQ=60)
GAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCAT > SRR4302537.2246185/1‑94 (MQ=60)
GAATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCAG > SRR4302537.2156112/1‑94 (MQ=60)
GAATGGTCACGTCCACCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGAGATCATCACGCGCTGGCTCAT < SRR4302537.4071522/94‑1 (MQ=60)
ATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGC > SRR4302537.5790110/1‑94 (MQ=60)
ATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGC < SRR4302537.2508625/94‑1 (MQ=60)
ATGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGC > SRR4302537.1540896/1‑94 (MQ=60)
TGGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCC > SRR4302537.2801544/1‑94 (MQ=60)
GGTCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCG < SRR4302537.6197082/94‑1 (MQ=60)
TCACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCCCCATGGCGATCATCACGCGCTGGCTCATGCCGCC < SRR4302537.2815614/94‑1 (MQ=60)
CACGTCCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCG < SRR4302537.4006380/94‑1 (MQ=60)
CCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAG < SRR4302537.5954020/94‑1 (MQ=60)
CCAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAG < SRR4302537.1781301/94‑1 (MQ=60)
CAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGC < SRR4302537.3459337/94‑1 (MQ=60)
CAGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGC < SRR4302537.719799/94‑1 (MQ=60)
AGNGCGNCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCT < SRR4302537.1327020/94‑1 (MQ=60)
AGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCT > SRR4302537.3672848/1‑94 (MQ=60)
AGCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCT < SRR4302537.4525528/94‑1 (MQ=60)
GCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCTG < SRR4302537.5908096/94‑1 (MQ=60)
GCGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCTG < SRR4302537.2454716/94‑1 (MQ=60)
CGCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCTGA < SRR4302537.2385453/94‑1 (MQ=60)
GCGGCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCTGAT > SRR4302537.2915188/1‑94 (MQ=60)
GCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCTGATGCG > SRR4302537.1002116/1‑94 (MQ=60)
GCGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCTGATGCG > SRR4302537.4881492/1‑94 (MQ=60)
CGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCTGATGCGG > SRR4302537.1945581/1‑94 (MQ=60)
CGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCTGATGCGG < SRR4302537.2998261/94‑1 (MQ=60)
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CATGGGTAATTAACACCAGCGCCATGTTCTCTTTCTGCTGTAGCTCCAGCAGTAGTTCGATGATTTGCGCCTGAATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCTGATGCGG > NC_000913/3700841‑3701027
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
