Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I2 R1	882	254.4	12957588	98.0%	12698436	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,716,168	G→A	P209L (CCG→CTG)	yiaF ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,716,168	0	G	A	97.0%	1066.5 / 9.2	304	P209L (CCG→CTG)	yiaF	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (6/3); new base A (126/169); total (132/172)
Fisher's exact test for biased strand distribution p-value = 1.84e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.76e-01

Only 100 of 323 total aligned reads displayed.

ATGCCATTTGCGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCGGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCTGTTTT  >  NC_000913/3716078‑3716257

aTGCCATTTGCGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGa                                                                                         <  1:1142715/93‑1 (MQ=255)

     aTTTGCGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCaa                                                                                    >  1:4031673/1‑93 (MQ=255)

      tttGCGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGACAGTTTGTGCCGCCAGAATCAAc                                                                                   >  2:804054/1‑93 (MQ=255)

      tttGCGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAAc                                                                                   <  2:2434961/93‑1 (MQ=255)

      tttGCGACAAAGCTCACCTGAGGACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGATGTTGCGTGACAGTTTGTGCCGCCAGAATCAAc                                                                                   >  1:998104/1‑93 (MQ=255)

         gCGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGt                                                                                <  2:1222239/93‑1 (MQ=255)

         gCGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGt                                                                                >  2:3163767/1‑93 (MQ=255)

          cGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGtt                                                                               <  1:6100543/93‑1 (MQ=255)

          cGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGtt                                                                               <  1:1994102/93‑1 (MQ=255)

          cGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGtt                                                                               <  2:2647183/93‑1 (MQ=255)

            aCAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGc                                                                             >  1:4335101/1‑93 (MQ=255)

            aCAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGc                                                                             >  2:1801889/1‑93 (MQ=255)

                 gCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGc                                                                        >  1:2704430/1‑93 (MQ=255)

                  cTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCa                                                                       <  2:5780892/93‑1 (MQ=255)

                   tCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCAt                                                                      <  1:5548896/93‑1 (MQ=255)

                   tCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCAt                                                                      >  2:4965793/1‑93 (MQ=255)

                    cACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATc                                                                     >  2:6045388/1‑93 (MQ=255)

                    cACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATc                                                                     >  2:2928799/1‑93 (MQ=255)

                    cACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATc                                                                     <  1:2621142/93‑1 (MQ=255)

                     aCCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCa                                                                    >  2:705605/1‑93 (MQ=255)

                     aCCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCa                                                                    <  1:5466505/93‑1 (MQ=255)

                     aCCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCa                                                                    <  2:3956796/93‑1 (MQ=255)

                        tGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCGGAATCAACGGTTGCAATGCATCAGCt                                                                 >  1:6450000/1‑93 (MQ=255)

                        tGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCt                                                                 >  2:2145743/1‑93 (MQ=255)

                          aGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTgg                                                               >  1:2852999/1‑93 (MQ=255)

                          aGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTgg                                                               <  2:4221420/93‑1 (MQ=255)

                          aGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTgg                                                               <  1:1626981/93‑1 (MQ=255)

                            tACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGcg                                                             >  2:5613573/1‑93 (MQ=255)

                            tACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGcg                                                             >  1:5632471/1‑93 (MQ=255)

                              ccTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGcgtc                                                           >  2:2820884/1‑93 (MQ=255)

                              ccTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGcgtc                                                           <  1:3949575/93‑1 (MQ=255)

                               cTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGcgtcg                                                          <  2:2358689/93‑1 (MQ=255)

                               cTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGcgtcg                                                          >  2:4449011/1‑93 (MQ=255)

                                 tGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGtt                                                        >  1:3968442/1‑93 (MQ=255)

                                  gCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTa                                                       <  1:3336591/93‑1 (MQ=255)

                                  gCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTa                                                       <  1:6182374/93‑1 (MQ=255)

                                    tGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCGGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTAcc                                                     >  1:1045123/1‑93 (MQ=255)

                                     gAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCa                                                    >  1:2781649/1‑93 (MQ=255)

                                      aGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCAc                                                   <  2:6211426/93‑1 (MQ=255)

                                       ggaaTGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACt                                                  >  2:5137232/3‑93 (MQ=255)

                                       gCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACt                                                  <  2:331962/93‑1 (MQ=255)

                                       gCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACt                                                  >  2:1645156/1‑93 (MQ=255)

                                        cAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACtt                                                 >  2:1315904/1‑93 (MQ=255)

                                         aaTGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACttt                                                <  2:1604632/93‑1 (MQ=255)

                                          aTGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTg                                               >  2:3591522/1‑93 (MQ=255)

                                          aTGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTAACACTTTg                                               >  1:5021355/1‑93 (MQ=255)

                                           tGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTgg                                              <  2:6145755/93‑1 (MQ=255)

                                            gTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAGTGCATCAGCTGGCGTCGTTACCACTTTGGt                                             <  2:5293797/93‑1 (MQ=255)

                                            gTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGt                                             <  1:2306943/93‑1 (MQ=255)

                                               gTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGaa                                          >  2:3721140/1‑93 (MQ=255)

                                               gTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGaa                                          <  2:1709001/93‑1 (MQ=255)

                                               gTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGaa                                          <  2:5944879/93‑1 (MQ=255)

                                                tctcCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAAt                                         <  1:2436952/93‑1 (MQ=255)

                                                  tcCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGc                                       >  1:5442887/1‑93 (MQ=255)

                                                  tcCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGc                                       <  2:4691260/93‑1 (MQ=255)

                                                  tcCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGc                                       >  1:2230889/1‑93 (MQ=255)

                                                   ccAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGcc                                      <  2:2836350/93‑1 (MQ=255)

                                                     aaCCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTg                                    >  1:3526900/1‑93 (MQ=255)

                                                       ccATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGAt                                  >  2:5383528/1‑93 (MQ=255)

                                                        cATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATc                                 >  2:589216/1‑93 (MQ=255)

                                                        cATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATc                                 <  1:3006612/93‑1 (MQ=255)

                                                         aTCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCa                                <  1:6002548/93‑1 (MQ=255)

                                                          tCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCaa                               <  1:1804849/93‑1 (MQ=255)

                                                           cACCAGTTGTTTCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCaaa                              <  2:2405934/93‑1 (MQ=255)

                                                           cACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCaaa                              <  2:3376846/93‑1 (MQ=255)

                                                              cAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGAc                           <  1:379782/93‑1 (MQ=255)

                                                              cAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGAc                           >  1:1962100/1‑93 (MQ=255)

                                                              cAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGAc                           <  2:1520844/93‑1 (MQ=255)

                                                              cAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGAc                           >  1:1763771/1‑93 (MQ=255)

                                                               aGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGAcc                          <  1:2827681/93‑1 (MQ=255)

                                                               aGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGAcc                          <  2:1060068/93‑1 (MQ=255)

                                                               aGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGAcc                          >  1:4249087/1‑93 (MQ=255)

                                                                 ttgttgCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCgg                        >  1:4696594/1‑93 (MQ=255)

                                                                 ttgttgCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCgg                        >  1:1452398/1‑93 (MQ=255)

                                                                    ttgCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGttt                     >  1:5851228/1‑93 (MQ=255)

                                                                      gCGTGAAAGTTTGTGCCGCCGGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCa                   <  2:1929503/93‑1 (MQ=255)

                                                                       cGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCaa                  <  2:3825374/93‑1 (MQ=255)

                                                                         tGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAat                <  1:39243/93‑1 (MQ=255)

                                                                         tGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAat                <  1:2162227/93‑1 (MQ=255)

                                                                          gAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAatc               >  1:5038089/1‑93 (MQ=255)

                                                                           aaaGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAatca              <  1:5091374/93‑1 (MQ=255)

                                                                           aaaGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAatca              <  1:1546219/93‑1 (MQ=255)

                                                                           aaaGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAatca              <  1:1327085/93‑1 (MQ=255)

                                                                           aaaGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAatca              <  2:2044470/93‑1 (MQ=255)

                                                                           aaaGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAatca              <  1:3293596/93‑1 (MQ=255)

                                                                            aaGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAatcat             <  1:141773/93‑1 (MQ=255)

                                                                            aaGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAatcat             >  1:492047/1‑93 (MQ=255)

                                                                            aaGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAatcat             >  2:3096315/1‑93 (MQ=255)

                                                                            aaGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAatcat             >  2:3560805/1‑93 (MQ=255)

                                                                               tttGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGc          <  1:2550566/93‑1 (MQ=255)

                                                                                ttGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGct         <  1:879909/93‑1 (MQ=255)

                                                                                 tgtgCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGctc        <  2:5206760/93‑1 (MQ=255)

                                                                                 tgtgCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGctc        >  1:441573/1‑93 (MQ=255)

                                                                                   tgCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCTg      >  2:3458649/1‑93 (MQ=255)

                                                                                   tgCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCTg      >  1:523685/1‑93 (MQ=255)

                                                                                   tgCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCTg      >  2:4050131/1‑93 (MQ=255)

                                                                                    gccgccAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCTGt     <  1:6315356/93‑1 (MQ=255)

                                                                                    gccgccAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCTGt     <  1:4512428/93‑1 (MQ=255)

                                                                                      cgccgGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCTGttt   <  2:3879321/93‑1 (MQ=255)

                                                                                       gccaGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCTGtttt  <  2:5433806/93‑1 (MQ=255)

ATGCCATTTGCGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCGGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCTGTTTT  >  NC_000913/3716078‑3716257

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TGGATGCCATTTGCGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCGGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCTGTTTTAGCG  >  NC_000913/3716075‑3716261

TGGATGCCATTTGCGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCA                                                                                               <  SRR4302537.2328882/94‑1 (MQ=60)

TGGATGCCATTTGCGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCA                                                                                               >  SRR4302537.4970710/1‑94 (MQ=60)

TGGATGCCATTTGCGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCA                                                                                               >  SRR4302537.185198/1‑94 (MQ=60)

TGGATGCCATTTGCGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCA                                                                                               >  SRR4302537.4943609/1‑94 (MQ=60)

 GGATGCCATTTGCGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAG                                                                                              <  SRR4302537.831390/94‑1 (MQ=60)

 GGATGCCATTTGCGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAG                                                                                              <  SRR4302537.1561205/94‑1 (MQ=60)

  GATGCCATTTGCGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGA                                                                                             >  SRR4302537.5489774/1‑94 (MQ=60)

  GATGCCATTTGCGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGA                                                                                             <  SRR4302537.1513532/94‑1 (MQ=60)

  GATGCCATTTGCGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGA                                                                                             <  SRR4302537.3739594/94‑1 (MQ=60)

   ATGCCATTTGCGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAA                                                                                            <  SRR4302537.1150659/94‑1 (MQ=60)

   ATGCCATTTGCGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAA                                                                                            >  SRR4302537.196992/1‑94 (MQ=60)

     GCCATTTGCGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATC                                                                                          >  SRR4302537.395733/1‑94 (MQ=60)

      CCATTTGCGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCA                                                                                         <  SRR4302537.3301660/94‑1 (MQ=60)

       CATTTGCGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAA                                                                                        <  SRR4302537.1998065/94‑1 (MQ=60)

       CATTTGCGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAA                                                                                        >  SRR4302537.4059892/1‑94 (MQ=60)

       CATTTGCGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAA                                                                                        >  SRR4302537.3529840/1‑94 (MQ=60)

        ATTTGCGACAAAGCTCACCTGAGGACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGATGTTGCGTGACAGTTTGTGCCGCCAGAATCAAC                                                                                       >  SRR4302537.1004992/1‑94 (MQ=60)

         TTTGCGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACG                                                                                      <  SRR4302537.4457466/94‑1 (MQ=60)

         TTTGCGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACG                                                                                      <  SRR4302537.3978896/94‑1 (MQ=60)

             CGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTG                                                                                  <  SRR4302537.2007966/94‑1 (MQ=60)

             CGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTG                                                                                  <  SRR4302537.6142460/94‑1 (MQ=60)

             CGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTG                                                                                  >  SRR4302537.6011953/1‑94 (MQ=60)

             CGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTG                                                                                  <  SRR4302537.6284007/94‑1 (MQ=60)

             CGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTG                                                                                  <  SRR4302537.5097193/94‑1 (MQ=60)

              GACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGC                                                                                 >  SRR4302537.4365205/1‑94 (MQ=60)

               ACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCA                                                                                >  SRR4302537.6130951/1‑94 (MQ=60)

                 AAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAAT                                                                              <  SRR4302537.871756/94‑1 (MQ=60)

                 AAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAAT                                                                              <  SRR4302537.2522146/94‑1 (MQ=60)

                  AAGCTCACCTGAGTTCCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATG                                                                             <  SRR4302537.1961224/94‑1 (MQ=60)

                   AGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGC                                                                            >  SRR4302537.2723310/1‑94 (MQ=60)

                    GCTCCCCTTAGTACCTTGCTTAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGAGCCGCCAGAATCAACGGTTGCAATGCA                                                                           <  SRR4302537.3023260/94‑1 (MQ=60)

                      TCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATC                                                                         <  SRR4302537.5586784/94‑1 (MQ=60)

                       CACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCA                                                                        <  SRR4302537.5132898/94‑1 (MQ=60)

                       CACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCA                                                                        <  SRR4302537.2639503/94‑1 (MQ=60)

                       CACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCA                                                                        <  SRR4302537.4302091/94‑1 (MQ=60)

                       CACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCA                                                                        <  SRR4302537.441036/94‑1 (MQ=60)

                        ACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCGGAATCAACGGTTGCAATGCATCAG                                                                       <  SRR4302537.4304390/94‑1 (MQ=60)

                        ACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAG                                                                       <  SRR4302537.5503792/94‑1 (MQ=60)

                         CCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGC                                                                      >  SRR4302537.5703824/1‑94 (MQ=60)

                         CCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGC                                                                      >  SRR4302537.5536191/1‑94 (MQ=60)

                          CTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCGGAATCAACGGTTGCAATGCATCAGCT                                                                     >  SRR4302537.6493741/1‑94 (MQ=60)

                          CTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCT                                                                     >  SRR4302537.4699688/1‑94 (MQ=60)

                          CTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCT                                                                     <  SRR4302537.4937996/94‑1 (MQ=60)

                          CTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCT                                                                     >  SRR4302537.1801250/1‑94 (MQ=60)

                          CTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCT                                                                     <  SRR4302537.540325/94‑1 (MQ=60)

                          CTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATAAACGGTTGCAATGCATCAGCT                                                                     <  SRR4302537.1342326/94‑1 (MQ=60)

                           TGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTG                                                                    <  SRR4302537.28104/94‑1 (MQ=60)

                           TGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTG                                                                    <  SRR4302537.2384260/94‑1 (MQ=60)

                            GAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGG                                                                   >  SRR4302537.2872988/1‑94 (MQ=60)

                            GAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGG                                                                   <  SRR4302537.2766774/94‑1 (MQ=60)

                             AGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCGGAATCAACGGTTGCAATGCATCAGCTGGG                                                                  >  SRR4302537.2604565/1‑94 (MQ=60)

                             AGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGC                                                                  <  SRR4302537.4974097/94‑1 (MQ=60)

                             AGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGC                                                                  <  SRR4302537.1638357/94‑1 (MQ=60)

                              GTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCG                                                                 >  SRR4302537.5671004/1‑94 (MQ=60)

                               TACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGT                                                                <  SRR4302537.1772147/94‑1 (MQ=60)

                               TACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGT                                                                >  SRR4302537.3835463/1‑94 (MQ=60)

                                taCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTC                                                               <  SRR4302537.2001402/92‑1 (MQ=60)

                                 CCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCG                                                              <  SRR4302537.3977197/94‑1 (MQ=60)

                                 CCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCG                                                              <  SRR4302537.3977198/94‑1 (MQ=60)

                                  CTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGT                                                             <  SRR4302537.5112439/94‑1 (MQ=60)

                                  CTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGT                                                             <  SRR4302537.266027/94‑1 (MQ=60)

                                   TTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTT                                                            <  SRR4302537.5556484/94‑1 (MQ=60)

                                   TTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTT                                                            >  SRR4302537.3996210/1‑94 (MQ=60)

                                   TTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTT                                                            >  SRR4302537.3996211/1‑94 (MQ=60)

                                    TGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTA                                                           >  SRR4302537.2041311/1‑94 (MQ=60)

                                     GCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTAC                                                          <  SRR4302537.3360208/94‑1 (MQ=60)

                                     GCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTAC                                                          <  SRR4302537.6224956/94‑1 (MQ=60)

                                      CTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCGGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACC                                                         >  SRR4302537.1052336/1‑94 (MQ=60)

                                       TGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCA                                                        <  SRR4302537.1084859/94‑1 (MQ=60)

                                       TGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCA                                                        >  SRR4302537.2801094/1‑94 (MQ=60)

                                          GCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTT                                                     <  SRR4302537.2328618/94‑1 (MQ=60)

                                          GCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTT                                                     >  SRR4302537.2849586/1‑94 (MQ=60)

                                           CAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTT                                                    >  SRR4302537.6360539/1‑94 (MQ=60)

                                           CAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTT                                                    >  SRR4302537.6129668/1‑94 (MQ=60)

                                           CAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCACCTGGCGTCGTTACCACTTT                                                    <  SRR4302537.5064743/94‑1 (MQ=60)

                                            AATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTG                                                   <  SRR4302537.132034/94‑1 (MQ=60)

                                            AATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTG                                                   >  SRR4302537.5926868/1‑94 (MQ=60)

                                            AATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTAACACTTTG                                                   >  SRR4302537.5055938/1‑94 (MQ=60)

                                             ATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGG                                                  <  SRR4302537.631007/94‑1 (MQ=60)

                                             ATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGG                                                  <  SRR4302537.3031339/94‑1 (MQ=60)

                                             ATGTACTCTCCAACCATCACCAGCTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTCCCAATGCATCAGCTGGCGTCGTTACCCCTTTGG                                                  <  SRR4302537.1459226/94‑1 (MQ=60)

                                              TGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGT                                                 <  SRR4302537.4348636/94‑1 (MQ=60)

                                              TGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGT                                                 <  SRR4302537.955174/94‑1 (MQ=60)

                                               GTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTG                                                >  SRR4302537.4923530/1‑94 (MQ=60)

                                               GTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTG                                                <  SRR4302537.2323227/94‑1 (MQ=60)

                                               GTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTG                                                <  SRR4302537.3336751/94‑1 (MQ=60)

                                                TAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGA                                               <  SRR4302537.2236105/94‑1 (MQ=60)

                                                 AGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAA                                              >  SRR4302537.6152382/1‑94 (MQ=60)

                                                   TCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATG                                            <  SRR4302537.2757302/94‑1 (MQ=60)

                                                   TCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATG                                            <  SRR4302537.2454120/94‑1 (MQ=60)

                                                    CTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGC                                           >  SRR4302537.2246627/1‑94 (MQ=60)

                                                    CTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGC                                           >  SRR4302537.5480017/1‑94 (MQ=60)

                                                      CCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCT                                         >  SRR4302537.3915826/1‑94 (MQ=60)

                                                      CCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCT                                         >  SRR4302537.6436366/1‑94 (MQ=60)

                                                      CCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACGTTGGTGAATGCCT                                         >  SRR4302537.1504472/1‑94 (MQ=60)

                                                       CAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTG                                        >  SRR4302537.3551847/1‑94 (MQ=60)

                                                        AACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGA                                       >  SRR4302537.5406635/1‑94 (MQ=60)

                                                         acccacgccagttgtcacgtgaacgcTTGTGGCGCCAGAATCAAAGGTTGCAATGCATCAGCTGGCGTCGTTACAGCTTTGGTGAATGCCTGAT                                      <  SRR4302537.4291750/68‑1 (MQ=54)

                                                         ACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGAT                                      <  SRR4302537.2754896/94‑1 (MQ=60)

                                                         ACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGAT                                      >  SRR4302537.3618285/1‑94 (MQ=60)

                                                         ACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGAT                                      >  SRR4302537.4960556/1‑94 (MQ=60)

                                                          CCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGCATGCCTtgtc                                     >  SRR4302537.565141/1‑90 (MQ=60)

                                                           CATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCA                                    <  SRR4302537.1052594/94‑1 (MQ=60)

                                                           CATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCA                                    <  SRR4302537.1883070/94‑1 (MQ=60)

                                                           CATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCA                                    >  SRR4302537.938555/1‑94 (MQ=60)

                                                           CATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCA                                    <  SRR4302537.3027548/94‑1 (MQ=60)

                                                           CATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACAACTTTGGTGAATGCCTGATCA                                    <  SRR4302537.4049175/94‑1 (MQ=60)

                                                            ATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAA                                   <  SRR4302537.6043784/94‑1 (MQ=60)

                                                            ATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAA                                   >  SRR4302537.1459585/1‑94 (MQ=60)

                                                            ATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAA                                   >  SRR4302537.4462002/1‑94 (MQ=60)

                                                            ATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGATGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAA                                   >  SRR4302537.2267130/1‑94 (MQ=60)

                                                             TCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAA                                  >  SRR4302537.2644651/1‑94 (MQ=60)

                                                             TCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAA                                  <  SRR4302537.1817444/94‑1 (MQ=60)

                                                              CACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAG                                 <  SRR4302537.4892038/94‑1 (MQ=60)

                                                               ACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGA                                >  SRR4302537.3002887/1‑94 (MQ=60)

                                                               ACCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGA                                >  SRR4302537.5493121/1‑94 (MQ=60)

                                                                CCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTGCCACTTTGGTGAATGCCTGATCAAAGAC                               <  SRR4302537.2454023/94‑1 (MQ=60)

                                                                CCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGAC                               >  SRR4302537.2278588/1‑94 (MQ=60)

                                                                CCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGAC                               >  SRR4302537.1776057/1‑94 (MQ=60)

                                                                CCAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGAC                               >  SRR4302537.1975743/1‑94 (MQ=60)

                                                                 CAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACC                              <  SRR4302537.3990889/94‑1 (MQ=60)

                                                                 CAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACC                              >  SRR4302537.4278611/1‑94 (MQ=60)

                                                                 CAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACC                              <  SRR4302537.4625491/94‑1 (MQ=60)

                                                                 CAGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACC                              <  SRR4302537.382414/94‑1 (MQ=60)

                                                                  AGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCG                             >  SRR4302537.3656167/1‑94 (MQ=60)

                                                                  AGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCG                             <  SRR4302537.1515523/94‑1 (MQ=60)

                                                                  AGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCG                             >  SRR4302537.2600073/1‑94 (MQ=60)

                                                                  AGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCG                             >  SRR4302537.3480651/1‑94 (MQ=60)

                                                                  AGTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCG                             <  SRR4302537.2847442/94‑1 (MQ=60)

                                                                   GTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGG                            >  SRR4302537.1462518/1‑94 (MQ=60)

                                                                   GTTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGG                            >  SRR4302537.4729085/1‑94 (MQ=60)

                                                                    TTGTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGT                           <  SRR4302537.3077960/94‑1 (MQ=60)

                                                                      GTTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTT                         >  SRR4302537.5891367/1‑94 (MQ=60)

                                                                       TTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTC                        <  SRR4302537.2854571/94‑1 (MQ=60)

                                                                       TTGCGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTC                        <  SRR4302537.2193093/94‑1 (MQ=60)

                                                                        TGCGTGAAAGTTTGTGCGGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCTCTTTGGTGAATGCCTGATCAAAGACCGGTTTCA                       <  SRR4302537.1547287/94‑1 (MQ=60)

                                                                          CGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAA                     >  SRR4302537.5671949/1‑94 (MQ=60)

                                                                          CGTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAA                     <  SRR4302537.157310/94‑1 (MQ=60)

                                                                           GTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAAT                    <  SRR4302537.5735137/94‑1 (MQ=60)

                                                                           GTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAAT                    >  SRR4302537.739081/1‑94 (MQ=60)

                                                                           GTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAAT                    <  SRR4302537.1182667/94‑1 (MQ=60)

                                                                           GTGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAAT                    >  SRR4302537.1634089/1‑94 (MQ=60)

                                                                            TGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCGCTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATC                   <  SRR4302537.334768/94‑1 (MQ=60)

                                                                            TGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATC                   >  SRR4302537.5072772/1‑94 (MQ=60)

                                                                            TGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATC                   <  SRR4302537.39539/94‑1 (MQ=60)

                                                                            TGAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATC                   <  SRR4302537.2177465/94‑1 (MQ=60)

                                                                             GAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCA                  >  SRR4302537.6272650/1‑94 (MQ=60)

                                                                             GAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCA                  >  SRR4302537.4171838/1‑94 (MQ=60)

                                                                             GAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCA                  >  SRR4302537.1798336/1‑94 (MQ=60)

                                                                             GAAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGGTTCAAATCA                  >  SRR4302537.2818951/1‑94 (MQ=60)

                                                                              AAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCAT                 <  SRR4302537.3316875/94‑1 (MQ=60)

                                                                              AAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCAT                 <  SRR4302537.1336337/94‑1 (MQ=60)

                                                                              AAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCAT                 <  SRR4302537.5126429/94‑1 (MQ=60)

                                                                              AAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCAT                 >  SRR4302537.495433/1‑94 (MQ=60)

                                                                              AAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCAT                 <  SRR4302537.1557014/94‑1 (MQ=60)

                                                                              AAAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCAT                 <  SRR4302537.5142433/94‑1 (MQ=60)

                                                                               AAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATC                <  SRR4302537.4398462/94‑1 (MQ=60)

                                                                               AAGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATC                <  SRR4302537.142778/94‑1 (MQ=60)

                                                                                AGTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCG               >  SRR4302537.2133998/1‑94 (MQ=60)

                                                                                 GTTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGC              <  SRR4302537.413247/94‑1 (MQ=60)

                                                                                  TTTGTGCCGCCGGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCT             <  SRR4302537.1350608/94‑1 (MQ=60)

                                                                                  TTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCT             <  SRR4302537.5653257/94‑1 (MQ=60)

                                                                                  TTTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCT             <  SRR4302537.2568431/94‑1 (MQ=60)

                                                                                   TTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTC            <  SRR4302537.885967/94‑1 (MQ=60)

                                                                                   TTGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTC            >  SRR4302537.444639/1‑94 (MQ=60)

                                                                                    TGTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCT           <  SRR4302537.5071482/94‑1 (MQ=60)

                                                                                     GTGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCTG          >  SRR4302537.527279/1‑94 (MQ=60)

                                                                                      TGCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCTGT         >  SRR4302537.3963047/1‑94 (MQ=60)

                                                                                       GCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCTGTT        >  SRR4302537.2496910/1‑94 (MQ=60)

                                                                                       GCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCTGTT        <  SRR4302537.6358579/94‑1 (MQ=60)

                                                                                       GCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCTGTT        <  SRR4302537.4543632/94‑1 (MQ=60)

                                                                                       GCCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCTGTT        <  SRR4302537.5471013/94‑1 (MQ=60)

                                                                                        CCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGTCCGGTTTCAAATCATCGCTCTGTTT       <  SRR4302537.6206109/94‑1 (MQ=60)

                                                                                        CCGCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCTGTTT       <  SRR4302537.1692967/94‑1 (MQ=60)

                                                                                          GCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCTGTTTTA     >  SRR4302537.5504223/1‑94 (MQ=60)

                                                                                          GCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCTGTTTTA     >  SRR4302537.2473733/1‑94 (MQ=60)

                                                                                          GCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCTGTTTTA     >  SRR4302537.4571803/1‑94 (MQ=60)

                                                                                          GCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCTGTTTTA     >  SRR4302537.2104853/1‑94 (MQ=60)

                                                                                          GCCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCTGTTTTA     >  SRR4302537.211358/1‑94 (MQ=60)

                                                                                           CCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCTGTTTTAG    <  SRR4302537.3700001/94‑1 (MQ=60)

                                                                                           CCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCTGTTTTAG    <  SRR4302537.6148123/94‑1 (MQ=60)

                                                                                           CCAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCTGTTTTAG    >  SRR4302537.4927276/1‑94 (MQ=60)

                                                                                            CAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCTGTTTTAGC   >  SRR4302537.291589/1‑94 (MQ=60)

                                                                                            CAGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCTGTTTTAGC   <  SRR4302537.3081967/94‑1 (MQ=60)

                                                                                             GGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCTGTTTTAGCG  >  SRR4302537.3344093/1‑94 (MQ=60)

                                                                                             AGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCTGTTTTAGCG  >  SRR4302537.633246/1‑94 (MQ=60)

                                                                                             AGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCTGTTTTAGCG  <  SRR4302537.1514523/94‑1 (MQ=60)

                                                                                             AGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCTGTTTTAGCG  >  SRR4302537.1711846/1‑94 (MQ=60)

                                                                                             AGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCTGTTTTAGCG  >  SRR4302537.905840/1‑94 (MQ=60)

TGGATGCCATTTGCGACAAAGCTCACCTGAGTACCTTGCTGAGCAATGTAGTCTCCAACCATCACCAGTTGTTGCGTGAAAGTTTGTGCCGCCGGAATCAACGGTTGCAATGCATCAGCTGGCGTCGTTACCACTTTGGTGAATGCCTGATCAAAGACCGGTTTCAAATCATCGCTCTGTTTTAGCG  >  NC_000913/3716075‑3716261

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 8 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`