Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,823,345 |
C→T |
A170V (GCG→GTG) |
recG → |
DNA helicase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,823,345 | 0 | C | T | 99.6%
| 793.9
/ NA
| 231 | A170V (GCG→GTG) | recG | DNA helicase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (119/110); minor base G (1/0); total (121/110) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 235 total aligned reads displayed.
GCACGCCAGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGCGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCGTTGCGCA > NC_000913/3823255‑3823434
|
gCACGCCAGAATTACAGGAAACGCTCACGCCGGTTTATCCGACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGgtgc > 2:5265906/1‑93 (MQ=255)
cACGCCAGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCt < 1:2792299/93‑1 (MQ=255)
ccAGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGAt > 2:3190816/1‑93 (MQ=255)
cAGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATc < 1:730967/93‑1 (MQ=255)
cAGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATc > 1:585789/1‑93 (MQ=255)
cAGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATc < 1:1959087/93‑1 (MQ=255)
aGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCt < 1:939306/93‑1 (MQ=255)
aGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCt > 2:3787849/1‑93 (MQ=255)
aGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCt < 1:5014348/93‑1 (MQ=255)
aGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCt > 1:3624995/1‑93 (MQ=255)
aaTTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGc > 2:4894187/1‑93 (MQ=255)
aTTACAGGAAGCGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCt < 2:6320096/93‑1 (MQ=255)
aTTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCt < 1:2087679/93‑1 (MQ=255)
tACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCg < 2:4540164/93‑1 (MQ=255)
aCAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGa > 1:1394232/1‑93 (MQ=255)
aCAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGa < 2:2236538/93‑1 (MQ=255)
aGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTCAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGaca > 1:5392383/1‑93 (MQ=255)
aGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGaca > 1:5375513/1‑93 (MQ=255)
aGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGaca < 1:142813/93‑1 (MQ=255)
ggAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGacac > 2:2898494/1‑93 (MQ=255)
ggAAACGCTCACACCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGacac > 2:5443496/1‑93 (MQ=255)
aaCGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTg < 2:957443/93‑1 (MQ=255)
aCGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTgc > 2:2621748/1‑93 (MQ=255)
aCGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGAGCTGGATCTGCTCGACACCTgc > 1:4181724/1‑93 (MQ=255)
gCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTgcgc > 2:4069539/1‑93 (MQ=255)
cTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGcc > 2:2383310/1‑93 (MQ=255)
tCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCa > 1:3860041/1‑93 (MQ=255)
aCGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCAtt < 2:4418707/93‑1 (MQ=255)
ggTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTgaaga < 2:5793454/93‑1 (MQ=255)
ggTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTgaaga < 2:3435164/93‑1 (MQ=255)
gTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTgaagaa < 1:324055/93‑1 (MQ=255)
tttATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAAc < 2:963691/93‑1 (MQ=255)
tATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTc < 2:1021502/93‑1 (MQ=255)
tATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTc > 1:3562292/1‑93 (MQ=255)
aTCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTcc > 1:4381359/1‑93 (MQ=255)
aTCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTcc < 1:6326587/93‑1 (MQ=255)
aTCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTcc > 1:3504421/1‑93 (MQ=255)
tCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCt > 2:3969011/1‑93 (MQ=255)
tCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCt < 2:2186804/93‑1 (MQ=255)
tCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCt < 2:3245604/93‑1 (MQ=255)
caacaaCGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTgc < 1:4468661/93‑1 (MQ=255)
caacaaCGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTgc < 1:1542012/93‑1 (MQ=255)
aacaacGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTgcc < 1:3943728/93‑1 (MQ=255)
aacaacGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTgcc > 1:2689662/1‑93 (MQ=255)
aacaacGGAAGGCGTAAAGAAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTgcc > 1:483136/1‑93 (MQ=255)
acaacGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTgccg > 1:5605806/1‑93 (MQ=255)
caacGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTgccgc > 1:240471/1‑93 (MQ=255)
caacGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTgccgc < 2:6402854/93‑1 (MQ=255)
aacGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTgccgcc > 1:4204848/1‑93 (MQ=255)
cGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCgg > 1:1092764/1‑93 (MQ=255)
ggAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGa > 2:3104695/1‑93 (MQ=255)
gAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGaa > 1:2938696/1‑93 (MQ=255)
aGGCGTAAAGCAGGCCACGCTGCGTAAATTAACTGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGTACt > 2:4673981/1‑93 (MQ=255)
gCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGt > 1:967870/1‑93 (MQ=255)
gTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTca < 2:5003299/93‑1 (MQ=255)
tAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTcac > 1:1060564/1‑93 (MQ=255)
aaaGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTcaca > 2:6451981/1‑93 (MQ=255)
aaaGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTcaca < 2:1594752/93‑1 (MQ=255)
gCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAgg > 2:5514858/1‑93 (MQ=255)
aGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGaa < 1:3814479/93‑1 (MQ=255)
aGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGaa > 2:4744704/1‑93 (MQ=255)
aGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGaa < 1:5734960/93‑1 (MQ=255)
gCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGGCACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAatg < 2:3526919/93‑1 (MQ=255)
ccACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAatga < 1:2158336/93‑1 (MQ=255)
cACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAatgat > 2:5950173/1‑93 (MQ=255)
cACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAatgat < 2:3870031/93‑1 (MQ=255)
cACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAatgat < 1:158131/93‑1 (MQ=255)
aCGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAatgatg < 2:5112434/93‑1 (MQ=255)
cGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAAtgatga < 1:5439087/93‑1 (MQ=255)
cGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAAtgatga < 2:1273154/93‑1 (MQ=255)
cGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAAtgatga < 1:4911728/93‑1 (MQ=255)
cTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACg > 2:2008160/1‑93 (MQ=255)
tGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGc > 1:2119268/1‑93 (MQ=255)
tGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGc < 1:682920/93‑1 (MQ=255)
tGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGc > 2:1386262/1‑93 (MQ=255)
cGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTa > 1:798122/1‑93 (MQ=255)
cGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTa > 2:1924067/1‑93 (MQ=255)
gTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTAc < 1:2504175/93‑1 (MQ=255)
gTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTAc < 2:3370605/93‑1 (MQ=255)
tAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTAcc > 2:4592486/1‑93 (MQ=255)
aaTTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCgg > 2:1630644/1‑93 (MQ=255)
ttAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAAAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGaa < 2:5043504/93‑1 (MQ=255)
tAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAg < 2:157304/93‑1 (MQ=255)
tAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAg < 1:1745928/93‑1 (MQ=255)
aaCCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGc < 1:4668834/93‑1 (MQ=255)
aCCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCg < 1:1712748/93‑1 (MQ=255)
aCCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCg > 1:6024095/1‑93 (MQ=255)
aCCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCg < 2:5656245/93‑1 (MQ=255)
ccGCCCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCGt < 1:643029/93‑1 (MQ=255)
cGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGCAGCGtt > 1:1280057/1‑93 (MQ=255)
cGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCGtt < 2:1307397/93‑1 (MQ=255)
cGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCGtg > 2:4176777/1‑92 (MQ=255)
gACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCGTTg > 2:4735839/1‑93 (MQ=255)
gACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCGTTg > 2:3651593/1‑93 (MQ=255)
aCCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCGTTgc < 1:5267264/93‑1 (MQ=255)
aCCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCGTTgc < 1:6363281/93‑1 (MQ=255)
ccAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCGTTgcg > 2:5022368/1‑93 (MQ=255)
cAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCGTTgcgc < 2:5219427/93‑1 (MQ=255)
cAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCGTTgcgc > 1:6429594/1‑93 (MQ=255)
cAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCGTTgcgc > 1:2646912/1‑93 (MQ=255)
|
GCACGCCAGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGCGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCGTTGCGCA > NC_000913/3823255‑3823434
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGCACGCCAGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGCGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCGTTGCGCACTT > NC_000913/3823253‑3823437
|
CAGCACGCCAGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTG > SRR4302537.4798166/1‑94 (MQ=60)
CAGCACGCCAGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTG < SRR4302537.6154008/94‑1 (MQ=60)
CACGCCAGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTG < SRR4302537.2811814/94‑1 (MQ=60)
ACGCCAGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGG < SRR4302537.3969730/94‑1 (MQ=60)
CGCCAGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGA > SRR4302537.6436763/1‑94 (MQ=60)
GCCAGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGAT > SRR4302537.2379092/1‑94 (MQ=60)
CCAGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATC > SRR4302537.589789/1‑94 (MQ=60)
CCAGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATC < SRR4302537.5640064/94‑1 (MQ=60)
CAGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGTGTAAATTAACCGACCAGGTGCTGGATCT > SRR4302537.2029061/1‑94 (MQ=60)
CAGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCT < SRR4302537.6479807/94‑1 (MQ=60)
CAGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCT < SRR4302537.3587084/94‑1 (MQ=60)
CAGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCT < SRR4302537.1972716/94‑1 (MQ=60)
CAGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCT > SRR4302537.3650542/1‑94 (MQ=60)
CAGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCT < SRR4302537.735957/94‑1 (MQ=60)
AGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACTGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTG > SRR4302537.486647/1‑94 (MQ=60)
AGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTG < SRR4302537.5048886/94‑1 (MQ=60)
AGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTG < SRR4302537.945784/94‑1 (MQ=60)
AGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTG > SRR4302537.2893606/1‑94 (MQ=60)
AGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTG < SRR4302537.3591023/94‑1 (MQ=60)
ATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTC < SRR4302537.5673417/94‑1 (MQ=60)
ATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTC < SRR4302537.2102404/94‑1 (MQ=60)
ATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTC < SRR4302537.541589/94‑1 (MQ=60)
TACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGA > SRR4302537.1403952/1‑94 (MQ=60)
TACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGA > SRR4302537.2139580/1‑94 (MQ=60)
CAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTCAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACA > SRR4302537.5429214/1‑94 (MQ=60)
CAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACA > SRR4302537.5412285/1‑94 (MQ=60)
AGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACAC < SRR4302537.143828/94‑1 (MQ=60)
AGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACAC > SRR4302537.5309040/1‑94 (MQ=60)
GGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACC < SRR4302537.725285/94‑1 (MQ=60)
GGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACC > SRR4302537.5954516/1‑94 (MQ=60)
GAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCT < SRR4302537.4489011/94‑1 (MQ=60)
AACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGC > SRR4302537.3802773/1‑94 (MQ=60)
AACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGAGCTGGATCTGCTCGACACCTGC > SRR4302537.4210917/1‑94 (MQ=60)
CTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCA > SRR4302537.4289405/1‑94 (MQ=60)
CTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCA > SRR4302537.3887060/1‑94 (MQ=60)
CACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATT < SRR4302537.6388609/94‑1 (MQ=60)
CACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATT > SRR4302537.5031150/1‑94 (MQ=60)
ACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTG < SRR4302537.1510099/94‑1 (MQ=60)
CGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGA < SRR4302537.2799465/94‑1 (MQ=60)
GTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAAC < SRR4302537.326302/94‑1 (MQ=60)
TTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACT < SRR4302537.4891872/94‑1 (MQ=60)
TTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTC > SRR4302537.3587420/1‑94 (MQ=60)
TATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCC > SRR4302537.3529213/1‑94 (MQ=60)
TATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCC > SRR4302537.4411598/1‑94 (MQ=60)
ATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCT < SRR4302537.6369858/94‑1 (MQ=60)
TCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTG < SRR4302537.2490357/94‑1 (MQ=60)
CCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGC < SRR4302537.1114005/94‑1 (MQ=60)
CCAACAAAGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCGTGC > SRR4302537.1745661/1‑94 (MQ=60)
CAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCC < SRR4302537.4499565/94‑1 (MQ=60)
CAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCC > SRR4302537.2708432/1‑94 (MQ=60)
CAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCC < SRR4302537.1552775/94‑1 (MQ=60)
CAACAACGGAAGGCGTAAAGAAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCC > SRR4302537.486447/1‑94 (MQ=60)
AACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCG > SRR4302537.5644132/1‑94 (MQ=60)
AACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCG < SRR4302537.3971312/94‑1 (MQ=60)
AACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCG < SRR4302537.970147/94‑1 (MQ=60)
AACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACGCCTGCCG < SRR4302537.5861556/94‑1 (MQ=60)
ACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGC > SRR4302537.242173/1‑94 (MQ=60)
CAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCC > SRR4302537.4234196/1‑94 (MQ=60)
ACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGG > SRR4302537.891384/1‑94 (MQ=60)
ACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGG > SRR4302537.1095546/1‑94 (MQ=60)
ACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGG > SRR4302537.1100310/1‑94 (MQ=60)
GGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAA > SRR4302537.676333/1‑94 (MQ=60)
GGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAA > SRR4302537.2959326/1‑94 (MQ=60)
GAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAAC < SRR4302537.6251371/94‑1 (MQ=60)
AAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACT > SRR4302537.3726721/1‑94 (MQ=60)
AAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACT > SRR4302537.1583049/1‑94 (MQ=60)
AAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTACCGCCGGAACT > SRR4302537.3841630/1‑94 (MQ=60)
GGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGT > SRR4302537.974542/1‑94 (MQ=60)
GGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGT < SRR4302537.8190/94‑1 (MQ=60)
CGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCA > SRR4302537.255859/1‑94 (MQ=60)
GTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCAC > SRR4302537.2654892/1‑94 (MQ=60)
GTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCAC > SRR4302537.1067880/1‑94 (MQ=60)
AAGCAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAG < SRR4302537.16056/94‑1 (MQ=60)
CAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGACCTCCTGCCGCCGGAACTGTCACAAGGAA < SRR4302537.1782736/94‑1 (MQ=60)
CAGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAA < SRR4302537.3161947/94‑1 (MQ=60)
AGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAAT < SRR4302537.5774224/94‑1 (MQ=60)
AGGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAAT < SRR4302537.3841227/94‑1 (MQ=60)
AGGCCACGCTGCGTAAATTAACCGACCAGGGGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAAT > SRR4302537.2897941/1‑94 (MQ=60)
GGCCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATG > SRR4302537.1330769/1‑94 (MQ=60)
CCACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGAT < SRR4302537.2173549/94‑1 (MQ=60)
CACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATG < SRR4302537.159253/94‑1 (MQ=60)
CACGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATG > SRR4302537.2148292/1‑94 (MQ=60)
CACGCTGCGTAAAGTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATG < SRR4302537.1354455/94‑1 (MQ=60)
CGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGAC < SRR4302537.4945629/94‑1 (MQ=60)
CGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGAC < SRR4302537.1515836/94‑1 (MQ=60)
CGCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGAC < SRR4302537.5476191/94‑1 (MQ=60)
GCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACG < SRR4302537.4028729/94‑1 (MQ=60)
GCTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACG < SRR4302537.1789459/94‑1 (MQ=60)
CTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGC > SRR4302537.2134185/1‑94 (MQ=60)
CTGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGC > SRR4302537.2684613/1‑94 (MQ=60)
TGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCT < SRR4302537.1416995/94‑1 (MQ=60)
TGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCT < SRR4302537.687600/94‑1 (MQ=60)
TGCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCT < SRR4302537.4443535/94‑1 (MQ=60)
GCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTA > SRR4302537.5464694/1‑94 (MQ=60)
GCGTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTA > SRR4302537.803601/1‑94 (MQ=60)
GTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACC < SRR4302537.3369149/94‑1 (MQ=60)
GTAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACC < SRR4302537.2521789/94‑1 (MQ=60)
TAAATTAACCGGCGAGGTGCTGGATCTGCGCGACACCTGCTCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCG < SRR4302537.1587133/94‑1 (MQ=60)
TAAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCG > SRR4302537.422158/1‑94 (MQ=60)
AAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGG < SRR4302537.77226/94‑1 (MQ=60)
AAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGG < SRR4302537.4850108/94‑1 (MQ=60)
AAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGG > SRR4302537.3467182/1‑94 (MQ=60)
AAATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGG > SRR4302537.5332557/1‑94 (MQ=60)
AATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGA > SRR4302537.6378839/1‑94 (MQ=60)
ATTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAA > SRR4302537.453028/1‑94 (MQ=60)
TTAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAG > SRR4302537.415588/1‑94 (MQ=60)
TAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGC < SRR4302537.1758108/94‑1 (MQ=60)
TAACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGC < SRR4302537.5225827/94‑1 (MQ=60)
AACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCG > SRR4302537.6065491/1‑94 (MQ=60)
AACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCG < SRR4302537.4701136/94‑1 (MQ=60)
ACCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCGT < SRR4302537.1724708/94‑1 (MQ=60)
CCGCCCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCGTT < SRR4302537.647409/94‑1 (MQ=60)
CCGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGCAGCGTT > SRR4302537.1288955/1‑94 (MQ=60)
CGACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCGTTG < SRR4302537.583322/94‑1 (MQ=60)
GACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCGTTGC < SRR4302537.1847507/94‑1 (MQ=60)
ACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCGTTGCG < SRR4302537.5303512/94‑1 (MQ=60)
ACCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCGTTGCG < SRR4302537.6406690/94‑1 (MQ=60)
CCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCGTTGCGC > SRR4302537.2665422/1‑94 (MQ=60)
CCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCGTTGCGC > SRR4302537.6473277/1‑94 (MQ=60)
CCAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCGTTGCGC > SRR4302537.6473276/1‑94 (MQ=60)
CAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCGTTGCGCA > SRR4302537.2116570/1‑94 (MQ=60)
CAGGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCGGTGCGCA > SRR4302537.5528164/1‑94 (MQ=60)
GGTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCGTTGCGCACT > SRR4302537.2851503/1‑94 (MQ=60)
GTGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCGTTGCGCACTT < SRR4302537.2730227/94‑1 (MQ=60)
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CAGCACGCCAGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGCGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCGTTGCGCACTT > NC_000913/3823253‑3823437
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
