Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,895,504 |
A→G |
I124V (ATC→GTC) |
yieI → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,895,504 | 0 | A | G | 95.8%
| 772.7
/ 16.4
| 239 | I124V (ATC→GTC) | yieI | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (7/3); new base G (140/89); total (147/92) |
| Fisher's exact test for biased strand distribution p-value = 7.45e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.92e-01 |
Only 100 of 254 total aligned reads displayed.
ATCTATTGTGCAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCATCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAAACAGACTCT > NC_000913/3895414‑3895593
|
aTCTATTGTGCAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGcatc > 1:5859429/1‑93 (MQ=255)
tCTATTGTGCAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGcgtca > 1:4426509/1‑93 (MQ=255)
tCTATTGTGCAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGcgtca > 2:6740/1‑93 (MQ=255)
cTATTGTGCAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGcgtcat < 2:3485038/93‑1 (MQ=255)
cTATTGTGCAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGcgtcat < 1:2595580/93‑1 (MQ=255)
aTTGTGCAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTc > 2:20330/1‑93 (MQ=255)
aTTGTGCAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTc > 2:3112656/1‑93 (MQ=255)
aTTGTGCAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGATGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTc > 1:3707999/1‑93 (MQ=255)
tgtgCAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCt > 1:4107598/1‑93 (MQ=255)
tgCAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGc > 1:4706674/1‑93 (MQ=255)
gCAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCa < 2:2596742/93‑1 (MQ=255)
gCAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCa < 2:5334751/93‑1 (MQ=255)
cAGTTATTGTCCATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCAt < 2:3231272/93‑1 (MQ=255)
cAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCAt > 1:1852714/1‑93 (MQ=255)
cAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCAt < 2:2892270/93‑1 (MQ=255)
cAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCAt < 1:4129596/93‑1 (MQ=255)
cAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCAt < 2:4206204/93‑1 (MQ=255)
aGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCAtt > 2:1546748/1‑93 (MQ=255)
gTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTg > 1:5934754/1‑93 (MQ=255)
gTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTg > 2:4085983/1‑93 (MQ=255)
tATTGTACATATTAAGGGCATGGTTTCCTCGGAGTTGTTTGAAAACAGTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCt < 1:1811891/93‑1 (MQ=255)
tATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCt > 2:2804812/1‑93 (MQ=255)
ttGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTgg > 2:406670/1‑93 (MQ=255)
tGTACATATTAAGGGCATGGCTTCCTCGCAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGc < 2:3471986/93‑1 (MQ=255)
gTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCATCATTCCTGCATTGCTGGCa > 2:462788/1‑93 (MQ=255)
tACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAg > 1:2313934/1‑93 (MQ=255)
aCATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCATCATTCCTGCATTGCTGGCAgg > 1:1178842/1‑93 (MQ=255)
atatTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGgtg < 1:1883814/93‑1 (MQ=255)
atatTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGgtg < 2:1343079/93‑1 (MQ=255)
tatTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGgtgt > 1:6301029/1‑93 (MQ=255)
tatTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGgtgg > 1:4964370/1‑92 (MQ=255)
atTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGtgtg < 2:3701887/93‑1 (MQ=255)
atTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGtgtg > 2:1609783/1‑93 (MQ=255)
atTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGtgtg > 2:5867849/1‑93 (MQ=255)
ttAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTgtgg > 2:2705926/1‑93 (MQ=255)
ttAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTgtgg > 1:5796107/1‑93 (MQ=255)
aaGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTgtggtg < 2:6248419/93‑1 (MQ=255)
aGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGtga < 1:1467406/93‑1 (MQ=255)
aGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCATCATTCCTGCATTGCTGGCAGGTGTGGtga < 2:3871490/93‑1 (MQ=255)
gggCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGtgat < 1:1934572/93‑1 (MQ=255)
gggCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGtgac < 1:3229312/93‑2 (MQ=255)
gCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGtgatga < 1:6108210/93‑1 (MQ=255)
cATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAg > 1:3007757/1‑93 (MQ=255)
aTGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGTGc > 1:5248622/1‑93 (MQ=255)
tGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCa > 1:1756749/1‑93 (MQ=255)
ggCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAg > 1:2808811/1‑93 (MQ=255)
cTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGaa > 1:5384591/1‑93 (MQ=255)
cTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGaa > 1:3673560/1‑93 (MQ=255)
ttCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAAt > 1:4888149/1‑93 (MQ=255)
ccTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCa > 1:628529/1‑93 (MQ=255)
ccTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCa < 2:2510262/93‑1 (MQ=255)
ccTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCa < 2:5548493/93‑1 (MQ=255)
cTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCAt < 2:5251401/93‑1 (MQ=255)
tCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCAtt < 2:4794552/93‑1 (MQ=255)
tCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCAtt < 1:489885/93‑1 (MQ=255)
cGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTa < 2:6198/93‑1 (MQ=255)
cGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGGGTGGTGGTGAGCAGAATCATTa > 2:2965273/1‑93 (MQ=255)
gAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTAcc > 1:1116578/1‑93 (MQ=255)
gAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTAcc > 1:2372497/1‑93 (MQ=255)
aGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTAccc < 2:3607377/93‑1 (MQ=255)
gttgttTGAAATCATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCg < 2:39483/93‑1 (MQ=255)
tgttTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTc < 2:5447136/93‑1 (MQ=255)
tgttTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTc > 2:1401538/1‑93 (MQ=255)
tgttTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTc > 1:223749/1‑93 (MQ=255)
ttGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTAc > 1:4838191/1‑93 (MQ=255)
tGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTAcc > 1:5605185/1‑93 (MQ=255)
gAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTAccc < 2:4927639/93‑1 (MQ=255)
aaacCATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCg < 2:6085162/93‑1 (MQ=255)
aaaCATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCgg > 1:5103439/1‑93 (MQ=255)
aaaCATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCgg > 1:2915762/1‑93 (MQ=255)
aCATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGAt < 2:596051/93‑1 (MQ=255)
aCATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGAt < 2:4303045/93‑1 (MQ=255)
ttctttctGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTgg > 2:5596514/1‑93 (MQ=255)
tctttctGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGa > 1:425144/1‑93 (MQ=255)
ctttctGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGat < 1:1563194/93‑1 (MQ=255)
ctttctGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGat > 2:449490/1‑93 (MQ=255)
tttctGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGata > 1:2217629/1‑93 (MQ=255)
tttctGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGata > 2:423800/1‑93 (MQ=255)
tctGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATAtt < 1:2456037/93‑1 (MQ=255)
ctGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATAttt > 2:2187031/1‑93 (MQ=255)
ctGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATAttt > 1:689441/1‑93 (MQ=255)
tGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTc > 1:1382405/1‑93 (MQ=255)
tGGTGACAGTCTCGTTGTCCGCATCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTc > 1:1427545/1‑93 (MQ=255)
gTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCAt < 1:5453916/93‑1 (MQ=255)
gACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGt > 2:3268179/1‑93 (MQ=255)
aCAGCCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTc < 2:5197084/93‑1 (MQ=255)
aGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCt < 2:694610/93‑1 (MQ=255)
aGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCt > 2:2447499/1‑93 (MQ=255)
aGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCt < 2:1234840/93‑1 (MQ=255)
aGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCt < 1:6162784/93‑1 (MQ=255)
aGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCt > 1:3934749/1‑93 (MQ=255)
gTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTg > 2:3827351/1‑93 (MQ=255)
gTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTg > 2:2411924/1‑93 (MQ=255)
tctcGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGa < 2:1689190/93‑1 (MQ=255)
tctcGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGa < 1:5733727/93‑1 (MQ=255)
gTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAAACa < 2:5659623/93‑1 (MQ=255)
gTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAAACa > 1:6022651/1‑93 (MQ=255)
gTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAAACAGAc < 2:4685310/93‑1 (MQ=255)
tCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAAACAGAct > 1:2838589/1‑93 (MQ=255)
ccGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAAACAGActc > 1:3069191/1‑93 (MQ=255)
|
ATCTATTGTGCAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCATCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAAACAGACTCT > NC_000913/3895414‑3895593
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGATCTATTGTGCAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCATCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAAACAGACTCTTTAA > NC_000913/3895412‑3895597
|
AGATCTATTGTGCAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGT > SRR4302537.5200786/1‑94 (MQ=60)
GATCTATTGTGCAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCATC > SRR4302537.6311252/1‑94 (MQ=60)
GATCTATTGTGCAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCATC > SRR4302537.5899612/1‑94 (MQ=60)
ATCTATTGTGCAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCA > SRR4302537.4457084/1‑94 (MQ=60)
TCTATTGTGCAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCAT > SRR4302537.3700607/1‑94 (MQ=60)
CTATTGTGCAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATT < SRR4302537.2613740/94‑1 (MQ=60)
CTATTGTGCAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATT > SRR4302537.555591/1‑94 (MQ=60)
TATTGTGCAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGATGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTC > SRR4302537.3734072/1‑94 (MQ=60)
TTGTGCAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCT > SRR4302537.4136295/1‑94 (MQ=60)
TGTGCAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTG > SRR4302537.5793577/1‑94 (MQ=60)
GTGCAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGC > SRR4302537.814972/1‑94 (MQ=60)
GTGCAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGC > SRR4302537.4739238/1‑94 (MQ=60)
TGTAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCA > SRR4302537.4937314/1‑94 (MQ=60)
TGCAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCA > SRR4302537.750460/1‑94 (MQ=60)
GCAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCAT > SRR4302537.1865597/1‑94 (MQ=60)
CAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATT < SRR4302537.4158418/94‑1 (MQ=60)
CAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTACTGCATT > SRR4302537.2911628/1‑94 (MQ=60)
CAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCATCATTCCTGCATT > SRR4302537.1308638/1‑94 (MQ=60)
AGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTG > SRR4302537.4801166/1‑94 (MQ=60)
AGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTG > SRR4302537.4970369/1‑94 (MQ=60)
AGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTG > SRR4302537.5965385/1‑94 (MQ=60)
AGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTG > SRR4302537.5975482/1‑94 (MQ=60)
AGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTG < SRR4302537.2244577/94‑1 (MQ=60)
GTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGC > SRR4302537.3895912/1‑94 (MQ=60)
GTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGC > SRR4302537.3064288/1‑94 (MQ=60)
TTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCT < SRR4302537.1640645/94‑1 (MQ=60)
TATTGTACATATTAAGGGCATGGTTTCCTCGGAGTTGTTTGAAAACAGTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTG < SRR4302537.1824520/94‑1 (MQ=60)
TATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTG < SRR4302537.1473483/94‑1 (MQ=60)
TATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTG > SRR4302537.6127181/1‑94 (MQ=60)
TGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCA < SRR4302537.2956900/94‑1 (MQ=60)
GTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAG > SRR4302537.5428846/1‑94 (MQ=60)
GTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAG > SRR4302537.2330268/1‑94 (MQ=60)
TACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCATCATTCCTGCATTGCTGGCAGG > SRR4302537.1187045/1‑94 (MQ=60)
ACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCgggg > SRR4302537.28399/1‑90 (MQ=60)
ACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGT > SRR4302537.6336010/1‑94 (MQ=60)
ACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGT > SRR4302537.4182902/1‑94 (MQ=60)
ACATATTAAGGGCATGGCTTCCTCGGAGGTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGG > SRR4302537.1819402/1‑94 (MQ=60)
ATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGT < SRR4302537.1896914/94‑1 (MQ=60)
ATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGT > SRR4302537.6344180/1‑94 (MQ=60)
ATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGG > SRR4302537.4998590/1‑94 (MQ=60)
ATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGG > SRR4302537.3844992/1‑94 (MQ=60)
TATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTG < SRR4302537.3089632/94‑1 (MQ=60)
TATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTG > SRR4302537.635340/1‑94 (MQ=60)
ATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGG > SRR4302537.5835845/1‑94 (MQ=60)
ATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGG < SRR4302537.2286516/94‑1 (MQ=60)
TAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTG < SRR4302537.5142210/94‑1 (MQ=60)
AAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGA > SRR4302537.146270/1‑94 (MQ=60)
AGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGAT > SRR4302537.1194488/1‑94 (MQ=60)
AGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGAT < SRR4302537.1477611/94‑1 (MQ=60)
GGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATG > SRR4302537.585350/1‑94 (MQ=60)
GGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATG < SRR4302537.1948025/94‑1 (MQ=60)
GGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGACG < SRR4302537.3252071/94‑1 (MQ=60)
GGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCATCATTCCTGCATTGCTGGCAGGTGTGGTGATG > SRR4302537.2408656/1‑94 (MQ=60)
GGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGA > SRR4302537.619879/1‑94 (MQ=60)
GCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAG > SRR4302537.3028695/1‑94 (MQ=60)
GCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAG < SRR4302537.6150185/94‑1 (MQ=60)
CATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGTGC > SRR4302537.5284743/1‑94 (MQ=60)
CATGGCTTCCTAGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGC < SRR4302537.5472156/94‑1 (MQ=60)
ATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCA > SRR4302537.1768994/1‑94 (MQ=60)
ATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCA > SRR4302537.2767346/1‑94 (MQ=60)
TGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAG < SRR4302537.4099068/94‑1 (MQ=60)
TGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAG > SRR4302537.2828446/1‑94 (MQ=60)
GCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAA > SRR4302537.5421403/1‑94 (MQ=60)
GCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAA > SRR4302537.3699405/1‑94 (MQ=60)
CTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAAT > SRR4302537.4921902/1‑94 (MQ=60)
TTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATC < SRR4302537.4286915/94‑1 (MQ=60)
TCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCA > SRR4302537.632809/1‑94 (MQ=60)
CCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCAT > SRR4302537.4722025/1‑94 (MQ=60)
CCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCAT > SRR4302537.4010648/1‑94 (MQ=60)
TCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTA < SRR4302537.1943753/94‑1 (MQ=60)
TCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTA < SRR4302537.493249/94‑1 (MQ=60)
GGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACC > SRR4302537.1124302/1‑94 (MQ=60)
GGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACC > SRR4302537.5341959/1‑94 (MQ=60)
GGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACC > SRR4302537.2389214/1‑94 (MQ=60)
GGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGGTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACC > SRR4302537.5814224/1‑94 (MQ=60)
GAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCC > SRR4302537.4708683/1‑94 (MQ=60)
AGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCG > SRR4302537.4898141/1‑94 (MQ=60)
AGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCG > SRR4302537.2422782/1‑94 (MQ=60)
TTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTC > SRR4302537.225341/1‑94 (MQ=60)
TGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCT < SRR4302537.23105/94‑1 (MQ=60)
TTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTAC > SRR4302537.4871591/1‑94 (MQ=60)
TTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACC < SRR4302537.557142/94‑1 (MQ=60)
TTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACC > SRR4302537.5643506/1‑94 (MQ=60)
TGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCC > SRR4302537.2513419/1‑94 (MQ=60)
TGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGGGTGGTGATGAGCAGAATCATTACCCGTCTACCC > SRR4302537.6042970/1‑94 (MQ=60)
GAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCG > SRR4302537.5004166/1‑94 (MQ=60)
AAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGG > SRR4302537.5138610/1‑94 (MQ=60)
AAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGG > SRR4302537.2936245/1‑94 (MQ=60)
AAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGA > SRR4302537.1185072/1‑94 (MQ=60)
ACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATT < SRR4302537.1855358/94‑1 (MQ=60)
ACATTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTAACCGTCTACCCGGATT > SRR4302537.2808783/1‑94 (MQ=60)
TTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGA > SRR4302537.310095/1‑94 (MQ=60)
TTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGA < SRR4302537.4152195/94‑1 (MQ=60)
TTCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGA > SRR4302537.428091/1‑94 (MQ=60)
TCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGAT < SRR4302537.1585970/94‑1 (MQ=60)
TCTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGAT < SRR4302537.5908857/94‑1 (MQ=60)
CTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATA > SRR4302537.2233263/1‑94 (MQ=60)
CTTTCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATA < SRR4302537.1574101/94‑1 (MQ=60)
TCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTT < SRR4302537.2473311/94‑1 (MQ=60)
TCTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTT > SRR4302537.694166/1‑94 (MQ=60)
CTGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTC > SRR4302537.1392051/1‑94 (MQ=60)
CTGGTGACAGTCTCGTTGTCCGCATCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTC > SRR4302537.1437479/1‑94 (MQ=60)
TGGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCA < SRR4302537.2874809/94‑1 (MQ=60)
GGTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCAT > SRR4302537.4204632/1‑94 (MQ=60)
GTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATG < SRR4302537.5491118/94‑1 (MQ=60)
GTGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGGGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATG > SRR4302537.5170515/1‑94 (MQ=60)
TGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGT > SRR4302537.6367627/1‑94 (MQ=60)
TGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGT < SRR4302537.2936125/94‑1 (MQ=60)
TGACAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGT > SRR4302537.4931560/1‑94 (MQ=60)
CAGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCT > SRR4302537.3962246/1‑94 (MQ=60)
AGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTG > SRR4302537.1529614/1‑94 (MQ=60)
AGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTG > SRR4302537.2375351/1‑94 (MQ=60)
AGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTG < SRR4302537.6205201/94‑1 (MQ=60)
AGTCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTG < SRR4302537.1935903/94‑1 (MQ=60)
GTCTCGTTGTCCGCATCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGA < SRR4302537.3620779/94‑1 (MQ=60)
TCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAA < SRR4302537.490557/94‑1 (MQ=60)
TCTCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAA < SRR4302537.5772983/94‑1 (MQ=60)
TCTCGTTGTCCGCATCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAA < SRR4302537.2247835/94‑1 (MQ=60)
TCGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAAAC > SRR4302537.6068486/1‑94 (MQ=60)
CGTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAAACA > SRR4302537.6064030/1‑94 (MQ=60)
CGTTGTCCGCGTCATTCCTGCATCGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAAACA < SRR4302537.3331644/94‑1 (MQ=60)
GTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAAACAG < SRR4302537.1855872/94‑1 (MQ=60)
GTTGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAAACAG > SRR4302537.6312404/1‑94 (MQ=60)
TGTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAAACAGAC < SRR4302537.2204204/94‑1 (MQ=60)
GTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAAACAGACT > SRR4302537.2858451/1‑94 (MQ=60)
GTCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAAACAGACT > SRR4302537.1413609/1‑94 (MQ=60)
TCCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAAACAGACTC > SRR4302537.3090577/1‑94 (MQ=60)
CCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAAACAGACTCT > SRR4302537.569834/1‑94 (MQ=60)
CCGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAAACAGACTCT > SRR4302537.1885060/1‑94 (MQ=60)
CCGCGTCATTCCTGCATTGCTGGCAGGTGTGGGGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAAACAGACTCT > SRR4302537.4681175/1‑94 (MQ=60)
CGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAAACAGACTCTT > SRR4302537.4646498/1‑94 (MQ=60)
CGCGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAAACAGACTCTT > SRR4302537.5020543/1‑94 (MQ=60)
CGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGCTTGGCTATTTCATGTCCTGACACAGACTCTTTA > SRR4302537.100407/1‑94 (MQ=60)
CGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAAACAGACTCTTTA > SRR4302537.3627429/1‑94 (MQ=60)
CGTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAAACAGACTCTTTA > SRR4302537.2873720/1‑94 (MQ=60)
GTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAAACAGACTCTTTAA > SRR4302537.4234045/1‑94 (MQ=60)
GTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAAACAGACTCTTTAA > SRR4302537.2096664/1‑94 (MQ=60)
GTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAAACAGACTCTTTAA > SRR4302537.3876866/1‑94 (MQ=60)
GTCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATCTCCTGAAACAGACTCTTTAA > SRR4302537.278478/1‑94 (MQ=60)
ATCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAAACAGACTCTTTAA > SRR4302537.3258414/1‑94 (MQ=60)
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AGATCTATTGTGCAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCATCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAAACAGACTCTTTAA > NC_000913/3895412‑3895597
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
